BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00018835
         (1250 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29694.3| unnamed protein product [Vitis vinifera]              388   e-105
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th...   379   e-102
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa...   372   e-100
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   370   e-100
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264...   368   2e-99
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...   367   4e-99
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe...   366   1e-98
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe...   366   1e-98
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   361   4e-97
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   359   2e-96
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263...   358   3e-96
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   352   2e-94
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5...   352   2e-94
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   347   5e-93
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   345   2e-92
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts...   345   3e-92
ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts...   345   3e-92
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A...   342   1e-91
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts...   337   5e-90
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts...   332   3e-88

>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  388 bits (996), Expect = e-105
 Identities = 211/346 (60%), Positives = 244/346 (70%), Gaps = 3/346 (0%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKGPLDRTKVV+RHLPPTIS++  +EQ+D+ F GRY  + FRPGK+S K  SYSRAY+DF
Sbjct: 1    MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             +PEDVIEFAEFF+GHVFVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTI KDPEY+E
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            F+E +AKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ          ++ NG
Sbjct: 121  FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 761  KPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR SG+SS NP                 MYVLRD++K   +KDKST++LV K+DDQ 
Sbjct: 181  KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 935  LIDKSVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKT 1114
            L DKSVN AA  G EALE ESG +                   +S   LLQQN   P K 
Sbjct: 241  LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREIS-HHLLQQNVTSPVKN 299

Query: 1115 SHNSAPPKQNQRREASGRIIRSILLTRDTRQPSSGP-QSELRSQTS 1249
               +  PKQNQRRE SGRIIRSILL +D RQ  S   Q+E +SQ S
Sbjct: 300  ILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQAS 345


>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  379 bits (973), Expect = e-102
 Identities = 214/349 (61%), Positives = 238/349 (68%), Gaps = 6/349 (1%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKG LDRTKV+LRHLPP I+++ LVEQVD+ FSGRY+WL FRPGKSS KH SYSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             + EDV+EFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPK+ SKKDGREGTILKD EYLE
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLE + KPVENLPSAEIQLERKEAERAG PKD PIVTPLMD+VRQ          ++ NG
Sbjct: 121  FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 180

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR  G+S   P                 MYVLRDS K    KDKSTY+LV K+D+QQ
Sbjct: 181  KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQ 240

Query: 935  LIDKSVNSAAVSGNEALEGES---GSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIP 1105
            L DK V  A+  G E  E ES   G T                   V+G  L QQN   P
Sbjct: 241  LSDKHVALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSP 300

Query: 1106 AKTSHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
             KT   S P KQN RRE  GR+IR ILL +D RQ  SSG QSE + +TS
Sbjct: 301  IKTILGSTPTKQNSRRE--GRMIRGILLNKDARQNQSSGVQSEQQIRTS 347


>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
            cacao]
          Length = 440

 Score =  372 bits (955), Expect = e-100
 Identities = 214/356 (60%), Positives = 238/356 (66%), Gaps = 13/356 (3%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKG LDRTKV+LRHLPP I+++ LVEQVD+ FSGRY+WL FRPGKSS KH SYSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILK------ 562
             + EDV+EFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPK+ SKKDGREGTILK      
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEH 120

Query: 563  -DPEYLEFLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXX 739
             D EYLEFLE + KPVENLPSAEIQLERKEAERAG PKD PIVTPLMD+VRQ        
Sbjct: 121  LDLEYLEFLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGS 180

Query: 740  XXTVLNGKPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLV 913
              ++ NGK +RR  G+S   P                 MYVLRDS K    KDKSTY+LV
Sbjct: 181  RRSLSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILV 240

Query: 914  HKQDDQQLIDKSVNSAAVSGNEALEGES---GSTXXXXXXXXXXXXXXXXXPNVSGGSLL 1084
             K+D+QQL DK V  A+  G E  E ES   G T                   V+G  L 
Sbjct: 241  SKRDEQQLSDKHVALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLH 300

Query: 1085 QQNAAIPAKTSHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
            QQN   P KT   S P KQN RRE  GR+IR ILL +D RQ  SSG QSE + +TS
Sbjct: 301  QQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNKDARQNQSSGVQSEQQIRTS 354


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
            tuberosum]
          Length = 483

 Score =  370 bits (949), Expect = e-100
 Identities = 207/343 (60%), Positives = 236/343 (68%), Gaps = 4/343 (1%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKGPLDR+KVVLRHLPPTISQS L++QVDSRF+GRY+W  F PGKSS KH +YSRAYI+F
Sbjct: 1    MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
              PEDVIEFAEFF+GHVFVNEKGTQFKTIVEYAPSQRVPK WSKKDGREGTILKDPEYLE
Sbjct: 61   KMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEFI+KP+ENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG
Sbjct: 121  FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            +PTRR SGTS+ +P                 MYVLRDSSK    KDK TY+L  K+DDQQ
Sbjct: 181  RPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQ 239

Query: 935  LIDKSVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKT 1114
              +KS  SAA S   A+E E+G                       G + + +   +  K 
Sbjct: 240  RAEKSGTSAAGSVANAVEEETG-----------------------GAADVGKKKILLLKE 276

Query: 1115 SHNSAPPKQNQRREASGRIIRSILL--TRDTRQPSSGPQSELR 1237
              N      NQRREASGRIIRSILL   R  + PS+  Q + R
Sbjct: 277  KEN----PNNQRREASGRIIRSILLKDARQNQAPSASQQDKHR 315


>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
            lycopersicum]
          Length = 485

 Score =  368 bits (945), Expect = 2e-99
 Identities = 205/343 (59%), Positives = 236/343 (68%), Gaps = 4/343 (1%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKGPLDR+KVVLRHLPPTISQS L++QVDSRF+GRY+W  F PGKSS KH +YSRAYI+F
Sbjct: 1    MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             +PEDVIEFAEFF+GHVFVNEKGTQFKTIVEYAPSQRVP+ WSKKDGREGTILKDPEYLE
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEFI+KP+ENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG
Sbjct: 121  FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            +PTRR SGTS+ +P                 MYVLRDSSK    KDK TY+L  K+DDQQ
Sbjct: 181  RPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQ 239

Query: 935  LIDKSVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKT 1114
              +KS  SA  S   A+E E+G                       G + + +   +  K 
Sbjct: 240  RAEKSGTSAPGSVANAVEEETG-----------------------GAADVGKKKILLLKE 276

Query: 1115 SHNSAPPKQNQRREASGRIIRSILL--TRDTRQPSSGPQSELR 1237
                 P   NQRREASGRIIRSILL   R  + PS+  Q + R
Sbjct: 277  KEKENP--NNQRREASGRIIRSILLKDARQNQAPSASQQEKHR 317


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X2 [Solanum tuberosum]
            gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X3 [Solanum
            tuberosum]
          Length = 508

 Score =  367 bits (943), Expect = 4e-99
 Identities = 206/335 (61%), Positives = 235/335 (70%), Gaps = 4/335 (1%)
 Frame = +2

Query: 239  RTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDV 418
            RTKVVLRHLPPT+SQS L+E VDSRF+GRY+W  FRP K+S KH SYS+AYIDF   EDV
Sbjct: 5    RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64

Query: 419  IEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIA 598
             EFAEFF+GH+FVNEKGTQFKTIVEYAPSQRVPK W KKD REGTILKDP Y+EFLEF+A
Sbjct: 65   TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124

Query: 599  KPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRV 778
            KPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDYVRQ          ++ NGK ++ V
Sbjct: 125  KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184

Query: 779  SGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVN 955
             GTSSR+P                MYV RDSSK   SKDKS Y+L+ K+ DQQL  KS +
Sbjct: 185  GGTSSRSPSSTASRRGSEKRTSTTMYVQRDSSKAGNSKDKS-YILLPKRGDQQLSVKSGS 243

Query: 956  SAAVSGNEALEGESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNS 1126
            SA  S  + +EGE G   +                  PNVSGGSL QQN +   K S + 
Sbjct: 244  SAPGSEIDVVEGEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVSSALKNSPSL 303

Query: 1127 APPKQNQRREASGRIIRSILLTRDTRQPSSGPQSE 1231
            +  KQNQR+EASGRIIRSILL +D RQ  S  QS+
Sbjct: 304  SALKQNQRQEASGRIIRSILL-KDARQNQSAFQSD 337


>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
          Length = 485

 Score =  366 bits (939), Expect = 1e-98
 Identities = 199/346 (57%), Positives = 236/346 (68%), Gaps = 3/346 (0%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            +K  LDRTKVVLRHLPP+ISQ++LVEQ+D  FSGRY+W+ FRPGK S K+ SYSRAYID 
Sbjct: 2    LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             +PEDVIEFAEFF+GH+FVNEKG+QFK IVEYAPSQRVPKQWSKKDGREGTI +DPEYLE
Sbjct: 62   KRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLE 121

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEF+AKP ENLPSAEIQLER+EAER+GA KD PIVTPLMD+VRQ          ++ NG
Sbjct: 122  FLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNG 181

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR  G SSR+P                 MYVLRD+ K   +KDKSTY+LV K+DDQQ
Sbjct: 182  KTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQ 241

Query: 935  LIDKSVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKT 1114
              +KSV  A+ +G   LE ESG +                       + + Q  +  AK 
Sbjct: 242  PSEKSVTLASAAGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSSAKN 301

Query: 1115 SHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
               +   KQN RR+ +GRIIR ILL +D RQ  SSG  S  + QTS
Sbjct: 302  MGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTS 347


>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
          Length = 482

 Score =  366 bits (939), Expect = 1e-98
 Identities = 199/346 (57%), Positives = 236/346 (68%), Gaps = 3/346 (0%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            +K  LDRTKVVLRHLPP+ISQ++LVEQ+D  FSGRY+W+ FRPGK S K+ SYSRAYID 
Sbjct: 2    LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             +PEDVIEFAEFF+GH+FVNEKG+QFK IVEYAPSQRVPKQWSKKDGREGTI +DPEYLE
Sbjct: 62   KRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLE 121

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEF+AKP ENLPSAEIQLER+EAER+GA KD PIVTPLMD+VRQ          ++ NG
Sbjct: 122  FLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNG 181

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR  G SSR+P                 MYVLRD+ K   +KDKSTY+LV K+DDQQ
Sbjct: 182  KTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQ 241

Query: 935  LIDKSVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKT 1114
              +KSV  A+ +G   LE ESG +                       + + Q  +  AK 
Sbjct: 242  PSEKSVTLASAAGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSSAKN 301

Query: 1115 SHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
               +   KQN RR+ +GRIIR ILL +D RQ  SSG  S  + QTS
Sbjct: 302  MGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTS 347


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  361 bits (926), Expect = 4e-97
 Identities = 201/343 (58%), Positives = 239/343 (69%), Gaps = 6/343 (1%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKGPLDRTKVV+R+LPP I+Q    EQ+D  F GRY+W+ FR GK+S KH S +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             KPEDV+EFAEFFNGHVFVNEKG QFKTIVEYAPSQRVPKQWSKKDGREGT+LKDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEFI+KPVENLPSAEIQLER+EAERAGA K+  IVTPLMD+VRQ           + NG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 761  KPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR SG+S+ +P                 MYVLRD++K    KDKSTY+LV K+DDQ 
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 935  LIDKSVNSAAVSGNEALEGESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIP 1105
              DK V+S++ +G+E +  ESG   ++                   VSG    QQ+A++ 
Sbjct: 241  -FDKPVSSSSATGSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASV- 298

Query: 1106 AKTSHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSE 1231
             KT  +S   KQNQRRE SGRIIR ILL +D RQ  +SG  SE
Sbjct: 299  -KTIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLHSE 340


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  359 bits (921), Expect = 2e-96
 Identities = 200/343 (58%), Positives = 238/343 (69%), Gaps = 6/343 (1%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKGPLDRTKVV+R+LPP I+Q    EQ+D  F GRY+W+ FR GK+S KH S +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             KPEDV+EFAEFFNGHVFVNEKG QFKTIVEYAPSQRVPKQWSKKDGREGT+LKDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEFI+KPVENLPSAEIQLER+EAERAGA K+  IVTPLMD+VRQ           + NG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 761  KPTRRVSGTSSRNPV--XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR SG+S+ +P                 MYVLRD++K    KDKSTY+LV K+DDQ 
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 935  LIDKSVNSAAVSGNEALEGESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIP 1105
              DK V+S++ +G+E +  ESG   ++                   VSG    QQ+A++ 
Sbjct: 241  -FDKPVSSSSATGSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASV- 298

Query: 1106 AKTSHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSE 1231
             K   +S   KQNQRRE SGRIIR ILL +D RQ  +SG  SE
Sbjct: 299  -KNIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLHSE 340


>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
            lycopersicum]
          Length = 438

 Score =  358 bits (919), Expect = 3e-96
 Identities = 202/335 (60%), Positives = 230/335 (68%), Gaps = 4/335 (1%)
 Frame = +2

Query: 239  RTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDV 418
            RTKVVLRHLPPT+SQS L+E VDSRF+GRY+W  FRP K+S KH SYS+AYIDF   EDV
Sbjct: 5    RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFNFRPAKTSLKHQSYSKAYIDFRNMEDV 64

Query: 419  IEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIA 598
             EFAEFF+GH+FVNEKGTQFKTIVEYAPSQRVPK W KKD REGTILKDP Y+EFLEF+A
Sbjct: 65   TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124

Query: 599  KPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRV 778
            KPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDYVRQ          ++ NGK ++ V
Sbjct: 125  KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVTSGARKSISNGKSSKSV 184

Query: 779  SGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVN 955
             GTSSR+P                MYV RDSSK+  SKDKS Y+L  K   QQL DKS  
Sbjct: 185  GGTSSRSPSSTASRRGSEKRTSTTMYVQRDSSKVGNSKDKS-YILASKCGYQQLSDKSSA 243

Query: 956  SAAVSGNEALEGESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNS 1126
            SA  S  + +EGE G   ++                 PNVSGGSL QQN +   K S + 
Sbjct: 244  SAPGSWIDVVEGEIGRSVTSDSGKKKILLLKGKEKESPNVSGGSLAQQNVSSALKNSPSL 303

Query: 1127 APPKQNQRREASGRIIRSILLTRDTRQPSSGPQSE 1231
            +  K NQ +E  GRIIRSILL +D RQ  S  QS+
Sbjct: 304  SALKLNQHQEVGGRIIRSILL-KDARQNQSAFQSD 337


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  352 bits (903), Expect = 2e-94
 Identities = 195/344 (56%), Positives = 231/344 (67%), Gaps = 3/344 (0%)
 Frame = +2

Query: 227  GPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNK 406
            G  D+TKVV+RHLPP ISQ   VEQ+D  FSGRY+WL +RPG +S KH SYSRAYIDF +
Sbjct: 5    GQSDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKR 64

Query: 407  PEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFL 586
            PEDVI+FAEFFNGH+FVNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEFL
Sbjct: 65   PEDVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFL 124

Query: 587  EFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKP 766
            E IAKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ           + NGK 
Sbjct: 125  ELIAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL 184

Query: 767  TRRVSGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDK 946
            +RR  G+ S +                MYVLRD++K    KDKSTY+ V K+DDQQL   
Sbjct: 185  SRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SN 243

Query: 947  SVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVS--GGSLLQQNAAIPAKTSH 1120
            +V   + SG   LE ES  +                   +S   G++ QQ +   +  + 
Sbjct: 244  AVTLGSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNI 303

Query: 1121 NSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
             S+   ++QRRE SGR+IRSILL +D+R   SSG  SE + QTS
Sbjct: 304  ISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTS 347


>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
            gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
            protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
            Smg-4/UPF3 family protein [Populus trichocarpa]
          Length = 527

 Score =  352 bits (903), Expect = 2e-94
 Identities = 195/344 (56%), Positives = 231/344 (67%), Gaps = 3/344 (0%)
 Frame = +2

Query: 227  GPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNK 406
            G  D+TKVV+RHLPP ISQ   VEQ+D  FSGRY+WL +RPG +S KH SYSRAYIDF +
Sbjct: 5    GQSDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKR 64

Query: 407  PEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFL 586
            PEDVI+FAEFFNGH+FVNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEFL
Sbjct: 65   PEDVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFL 124

Query: 587  EFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKP 766
            E IAKPVENLPSAEIQLER+EAERAGA KD PIVTPLMD+VRQ           + NGK 
Sbjct: 125  ELIAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL 184

Query: 767  TRRVSGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDK 946
            +RR  G+ S +                MYVLRD++K    KDKSTY+ V K+DDQQL   
Sbjct: 185  SRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SN 243

Query: 947  SVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVS--GGSLLQQNAAIPAKTSH 1120
            +V   + SG   LE ES  +                   +S   G++ QQ +   +  + 
Sbjct: 244  AVTLGSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNI 303

Query: 1121 NSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
             S+   ++QRRE SGR+IRSILL +D+R   SSG  SE + QTS
Sbjct: 304  ISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTS 347


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
            gi|223534215|gb|EEF35930.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 472

 Score =  347 bits (891), Expect = 5e-93
 Identities = 203/343 (59%), Positives = 233/343 (67%), Gaps = 2/343 (0%)
 Frame = +2

Query: 227  GPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNK 406
            G  ++TKVV+RHLPPTISQ + +EQ+D  FSGRY+W+ FRPGKSS KH SYSRAYIDF +
Sbjct: 4    GQAEKTKVVVRHLPPTISQGSFLEQIDVVFSGRYNWVSFRPGKSSQKHQSYSRAYIDFKR 63

Query: 407  PEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFL 586
            PEDVIEFAEFFNGH+FVNEKGTQF+ IVEYAPSQ VPKQWSKKDGREGTI+KDP YLEFL
Sbjct: 64   PEDVIEFAEFFNGHLFVNEKGTQFRAIVEYAPSQHVPKQWSKKDGREGTIVKDPAYLEFL 123

Query: 587  EFIAKPVENLPSAEIQLERKEAER-AGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGK 763
            E I+KP ENLPSAEIQLER+EAER A A KD PIVTPLMD+VRQ                
Sbjct: 124  ELISKPAENLPSAEIQLERREAERAASAAKDAPIVTPLMDFVRQ---------------- 167

Query: 764  PTRRVSGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLID 943
              +R + T SR                  YVLRDS+K    KDKSTYLLV K+DDQQ  D
Sbjct: 168  --KRAAKTGSR------------------YVLRDSAKSTSGKDKSTYLLVPKRDDQQFSD 207

Query: 944  KSVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHN 1123
            KS   A+ SG E LE ES                      +SGG + +QNAA   K   +
Sbjct: 208  KSTPFASASGTEVLEDES-----------ELYHLCLLIVQLSGG-MSKQNAASFDKNVTS 255

Query: 1124 SAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
            SA  KQ+QRRE+SGRIIRSILL +D+RQ  SSG QSE + Q+S
Sbjct: 256  SA-IKQSQRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSS 297


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
            gi|550312328|gb|ERP48419.1| hypothetical protein
            POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  345 bits (886), Expect = 2e-92
 Identities = 191/342 (55%), Positives = 231/342 (67%), Gaps = 1/342 (0%)
 Frame = +2

Query: 227  GPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNK 406
            G  D+TKVV+RHLPP +SQ   VEQ+D  FSGRY+WL +RPGKSS KH S SRAYIDF +
Sbjct: 4    GQSDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYIDFKR 63

Query: 407  PEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFL 586
            P+DVI+FAEFFNGH+FVNEKGTQFK IVEYAPSQ VPKQWSKKDGREGTILKDPEYLEFL
Sbjct: 64   PDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFL 123

Query: 587  EFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKP 766
            EFIAKPVENLPSAEIQLER+EAERAG  KD PIVTPLM+++RQ           + NGKP
Sbjct: 124  EFIAKPVENLPSAEIQLERREAERAGVAKDAPIVTPLMEFIRQKRAAKSGPRRILSNGKP 183

Query: 767  TRRVSGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDK 946
            +RR  G+ S +                MYVLRD+ K    K+KS Y  V K DD+QL  K
Sbjct: 184  SRRAGGSGSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQL-SK 242

Query: 947  SVNSAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNS 1126
            +V   + SG E  E E+  +                   +S    LQQ+ + P+  +  S
Sbjct: 243  AVTLGSGSGTEVSEEETAVSGITGTGKKKILLLKGKEKEIS----LQQSIS-PSDRNIIS 297

Query: 1127 APPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
            +   ++QR E+SGR+I+SILL +D+R+  SSG QSE + QTS
Sbjct: 298  STALKSQRHESSGRVIKSILLNKDSRRIQSSGVQSEPQMQTS 339


>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Cicer arietinum] gi|502076758|ref|XP_004485449.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X3 [Cicer arietinum]
            gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X4 [Cicer
            arietinum]
          Length = 510

 Score =  345 bits (884), Expect = 3e-92
 Identities = 200/346 (57%), Positives = 227/346 (65%), Gaps = 8/346 (2%)
 Frame = +2

Query: 236  DRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPED 415
            DRTKVV+RHLPPTIS+ +L   +D  FSGRY+WL FRP K SPKH S+SRAYIDFNKPED
Sbjct: 3    DRTKVVVRHLPPTISEDSLSSLIDGSFSGRYNWLSFRPAKISPKHTSFSRAYIDFNKPED 62

Query: 416  VIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFI 595
            VIEFAEFFNGHVFVNEKGTQFK  VEYAPSQRVPKQWSKKDGR+GTI KDPEYLEFLE +
Sbjct: 63   VIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEYLEFLELL 122

Query: 596  AKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRR 775
            AKPVENLPSAEIQLE++EAER+GA KD PIVTPLMD+VRQ          +  NGK TRR
Sbjct: 123  AKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAKGPRRLS-SNGKVTRR 181

Query: 776  V----SGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLID 943
                 +G+SS  P               MYV RD  K    KDKSTY+LV +Q DQ L +
Sbjct: 182  TGTPSNGSSSSAP--SRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSN 239

Query: 944  KSVNSAAVSGNEALE--GESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNA-AIPAKT 1114
            KS N A+  GN   +  G +GS                        S+ Q ++    AKT
Sbjct: 240  KSSNIASSDGNPTFDENGIAGSNDAGKKVLLLKGKEREIITASDSDSMSQHHSITSSAKT 299

Query: 1115 SHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
              NS   KQNQR E SGRII+SIL  +D RQ  SS   SE + QTS
Sbjct: 300  ILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSRAYSERQLQTS 345


>ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Cicer arietinum]
          Length = 517

 Score =  345 bits (884), Expect = 3e-92
 Identities = 200/346 (57%), Positives = 227/346 (65%), Gaps = 8/346 (2%)
 Frame = +2

Query: 236  DRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPED 415
            DRTKVV+RHLPPTIS+ +L   +D  FSGRY+WL FRP K SPKH S+SRAYIDFNKPED
Sbjct: 3    DRTKVVVRHLPPTISEDSLSSLIDGSFSGRYNWLSFRPAKISPKHTSFSRAYIDFNKPED 62

Query: 416  VIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFI 595
            VIEFAEFFNGHVFVNEKGTQFK  VEYAPSQRVPKQWSKKDGR+GTI KDPEYLEFLE +
Sbjct: 63   VIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEYLEFLELL 122

Query: 596  AKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRR 775
            AKPVENLPSAEIQLE++EAER+GA KD PIVTPLMD+VRQ          +  NGK TRR
Sbjct: 123  AKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAKGPRRLS-SNGKVTRR 181

Query: 776  V----SGTSSRNPVXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLID 943
                 +G+SS  P               MYV RD  K    KDKSTY+LV +Q DQ L +
Sbjct: 182  TGTPSNGSSSSAP--SRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSN 239

Query: 944  KSVNSAAVSGNEALE--GESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNA-AIPAKT 1114
            KS N A+  GN   +  G +GS                        S+ Q ++    AKT
Sbjct: 240  KSSNIASSDGNPTFDENGIAGSNDAGKKVLLLKGKEREIITASDSDSMSQHHSITSSAKT 299

Query: 1115 SHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
              NS   KQNQR E SGRII+SIL  +D RQ  SS   SE + QTS
Sbjct: 300  ILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSRAYSERQLQTS 345


>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
            gi|548862693|gb|ERN20051.1| hypothetical protein
            AMTR_s00071p00188270 [Amborella trichopoda]
          Length = 599

 Score =  342 bits (878), Expect = 1e-91
 Identities = 185/343 (53%), Positives = 227/343 (66%), Gaps = 14/343 (4%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MK PLDRTKVV+R LPP ++Q  L+E++DSRFSGRY W  FRPGK+S K+  +SR YIDF
Sbjct: 1    MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             +PEDV+EFAEFF GHVFVNEKG+QFK +VEYAPSQRVPK WSKKDGREGTI KDPEYLE
Sbjct: 61   KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLEF+AKP ENLPSAEIQLER+EAERAGA K+  IVTPLMD+VRQ          +  NG
Sbjct: 121  FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANG 180

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR +G SS +P                 MYVLRDS+K   SKDKSTY LV ++D+Q+
Sbjct: 181  KTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQK 240

Query: 935  LIDKSVNSAAVSGNEALEGES------------GSTXXXXXXXXXXXXXXXXXPNVSGGS 1078
            L D S   +A++G EAL+ ES            G+                     SG  
Sbjct: 241  LPDNSSAVSALAGPEALDDESVGVADVTAATVGGTLESGKKKVLLLKGKDREASQASGSV 300

Query: 1079 LLQQNAAIPAKTSHNSAPPKQNQRREASGRIIRSILLTRDTRQ 1207
            + QQ  + P +    SAP +Q+QRR+ + R+++SIL  +D RQ
Sbjct: 301  VQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQ 343


>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
            [Solanum tuberosum]
          Length = 482

 Score =  337 bits (865), Expect = 5e-90
 Identities = 194/332 (58%), Positives = 224/332 (67%), Gaps = 1/332 (0%)
 Frame = +2

Query: 239  RTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDV 418
            RTKVVLRHLPPT+SQS L+E VDSRF+GRY+W  FRP K+S KH SYS+AYIDF   EDV
Sbjct: 5    RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64

Query: 419  IEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIA 598
             EFAEFF+GH+FVNEKGTQFKTIVEYAPSQRVPK W KKD REGTILKDP Y+EFLEF+A
Sbjct: 65   TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124

Query: 599  KPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRV 778
            KPVENLPSAEIQLERKEAERAG+ KD PIVTPLMDYVRQ          ++ NGK ++ V
Sbjct: 125  KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184

Query: 779  SGTSSRNP-VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVN 955
             GTSSR+P                MYV RDSSK   SKDKS Y+L+ K+ DQQL  KS +
Sbjct: 185  GGTSSRSPSSTASRRGSEKRTSTTMYVQRDSSKAGNSKDKS-YILLPKRGDQQLSVKSGS 243

Query: 956  SAAVSGNEALEGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNSAPP 1135
            SA  S  + +EGE G                    +V+  S  ++   +  K        
Sbjct: 244  SAPGSEIDVVEGEIGR-------------------SVTADSGKKKILLLKGKEKEG---- 280

Query: 1136 KQNQRREASGRIIRSILLTRDTRQPSSGPQSE 1231
              NQR+EASGRIIRSILL +D RQ  S  QS+
Sbjct: 281  PNNQRQEASGRIIRSILL-KDARQNQSAFQSD 311


>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Glycine max] gi|571493781|ref|XP_006592655.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like isoform X2
            [Glycine max]
          Length = 514

 Score =  332 bits (850), Expect = 3e-88
 Identities = 192/350 (54%), Positives = 228/350 (65%), Gaps = 7/350 (2%)
 Frame = +2

Query: 221  MKGPLDRTKVVLRHLPPTISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDF 400
            MKG LDRTKVVLRHLPP+IS++ L+ Q+D+ F+GRY+WL FRPGK S KH+S+SRAYIDF
Sbjct: 1    MKGALDRTKVVLRHLPPSISEAALLSQIDAAFAGRYNWLSFRPGKISQKHMSFSRAYIDF 60

Query: 401  NKPEDVIEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLE 580
             +PEDVI FAEFFNGHVFVN KG+QFK IVEYAPSQRVP+QWSKKD R+GTI KD EYLE
Sbjct: 61   KRPEDVILFAEFFNGHVFVNVKGSQFKVIVEYAPSQRVPRQWSKKDLRDGTIYKDSEYLE 120

Query: 581  FLEFIAKPVENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNG 760
            FLE +AKPVENLPSAEIQLE++EAER+GA KD PI+TPLMD+VRQ           + NG
Sbjct: 121  FLELLAKPVENLPSAEIQLEKREAERSGAAKDIPIITPLMDFVRQ-KRAAKGPRRPLSNG 179

Query: 761  KPTRRVSGTSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQ 934
            K +RR   +S+  P                 MYV RD  K    KDKS+Y LV KQDDQ 
Sbjct: 180  KVSRRAGTSSNGGPSSATSRRGSGKKRVSATMYVARDPGKSSTIKDKSSYTLVPKQDDQH 239

Query: 935  LIDKSVNSAAVSGNEALE--GESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQ--NAAI 1102
            L +K+ N A+  GN+ L+  G SG+                    VS    + Q  N   
Sbjct: 240  LPNKASNMASSDGNQTLDENGVSGNHDAGKKKVLLLKGKEREIITVSDLDSMSQHHNVTS 299

Query: 1103 PAKTSHNSAPPKQNQRREASGRIIRSILLTRDTRQ-PSSGPQSELRSQTS 1249
             AKT   S   KQ+QR E SGRIIRSIL  ++  Q  SS   SE +  TS
Sbjct: 300  SAKTVVGSTVLKQSQRHEGSGRIIRSILSKKELHQSQSSRALSEQKILTS 349