BLASTX nr result

ID: Rehmannia22_contig00018806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00018806
         (431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245125.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    70   2e-10
ref|XP_006355312.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    63   4e-08
gb|EMJ23187.1| hypothetical protein PRUPE_ppa002858mg [Prunus pe...    56   4e-06

>ref|XP_004245125.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum lycopersicum]
          Length = 644

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
 Frame = -1

Query: 410 QLKCQKDEKMAMLENNMKLEGKIQKEENLKMFLTDRVKGVSTSSTVKEAEALYKQTDSSM 231
           QL C   E   +    ++ +   Q +ENLK  L  R K  S S++ KE     +   SS+
Sbjct: 149 QLFCPNKELEGVTHLTLRQQRNSQNKENLKCTLARREKTTSNSAS-KECRLDPQVGCSSI 207

Query: 230 FDGPRDISIVKRNSSTSVK---SEEQNILHDISNDPETQ-DRPCRSKQMRNLERGDSVSE 63
              P  +      SS   K   SEEQ   +D+ ND E+Q DR  +S Q  NL+RGD +SE
Sbjct: 208 ---PEPVKGTYDGSSYPRKEFVSEEQLTANDLVNDTESQEDRAHKSLQTGNLDRGDDLSE 264

Query: 62  NSVVGSISGQDMTPDDVVGV 3
            S V SISG D++PDD+VG+
Sbjct: 265 TSRVESISGTDISPDDIVGI 284


>ref|XP_006355312.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum]
          Length = 656

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
 Frame = -1

Query: 401 CQKDEKMAMLENNMKLEGKIQKEENLKMFLTDRVKGVSTSSTVKEAEALYKQTDSSMFDG 222
           C   E   + +  ++ +   Q +EN K  +  R K  S S++ KE   L  Q   ++   
Sbjct: 152 CPNKELEGVTDLTLRQQRNSQNKENPKCTVARREKTTSNSAS-KECR-LDPQVGCTII-- 207

Query: 221 PRDISIVKRNSSTSVK---SEEQNILHDISNDPETQ-DRPCRSKQMRNLERGDSVSENSV 54
           P  + +   +SS   K   SEEQ   +D+ ND E+Q D+  +S Q  NL+RGD +SE S 
Sbjct: 208 PEPVKVTYDDSSYPRKAFISEEQLTANDLVNDTESQEDKAHKSLQTGNLDRGDDLSETSR 267

Query: 53  VGSISGQDMTPDDVVGV 3
           V SISG D++PD +VG+
Sbjct: 268 VESISGTDISPDVIVGI 284


>gb|EMJ23187.1| hypothetical protein PRUPE_ppa002858mg [Prunus persica]
          Length = 626

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -1

Query: 203 VKRNSSTSVKSEEQNILHDISNDPETQ-DRPCRSKQMRNLERGDSVSENSVVGSISGQDM 27
           V +  S S   E+    +++ ND E + DR C S QM ++++ D VSE S+V SISG D+
Sbjct: 185 VFQERSLSYSGEDPGGPNELDNDSEYRGDRTCISPQMGHVDKSDDVSETSMVDSISGLDI 244

Query: 26  TPDDVVGV 3
           +PDDVVG+
Sbjct: 245 SPDDVVGI 252


Top