BLASTX nr result

ID: Rehmannia22_contig00018365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00018365
         (1961 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   305   6e-97
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   344   9e-92
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...   154   7e-89
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786...   152   2e-87
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...   142   3e-84
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi...   136   5e-84
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]        136   1e-81
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g...   136   1e-81
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...   151   1e-80
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...   151   1e-80
emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]        135   5e-79
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   137   3e-76
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi...   135   2e-74
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   132   4e-74
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   132   3e-73
gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indi...   135   5e-70
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo...   140   9e-70
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise...   142   1e-67
gb|ABA97040.1| retrotransposon protein, putative, unclassified [...   216   4e-66
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   115   8e-66

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  305 bits (780), Expect(2) = 6e-97
 Identities = 195/583 (33%), Positives = 281/583 (48%), Gaps = 10/583 (1%)
 Frame = +3

Query: 9    MSCLSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 188
            M+ L WNCRGLGNP +V+ L+   N   P  +F+ ET +   ++E +     F       
Sbjct: 1    MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAF--- 57

Query: 189  CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFSGIYGWPVEGEKYLT 368
              + S  R GGL L WK    F L S S HH+   + + +K W+F G+YGW  E EK+LT
Sbjct: 58   -GVASVGRAGGLCLYWKEEVMFSLVSFSQHHICGDVEDGNKKWRFVGVYGWAKEEEKHLT 116

Query: 369  WELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDG 548
            W L+R L  + +   L  GDFNEIL   EK GG  +   +M+ F + +    L DLG+ G
Sbjct: 117  WSLLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVG 176

Query: 549  FIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQWDRIWSE 728
              YTW  G++    I+ERLDR L +  W+D++P+    H  R  SDH  ++++  R    
Sbjct: 177  TWYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRP 236

Query: 729  QGPHXXXXXXXXXXXDVASRRIVSKNGATRMRWMGDLYGINWLKAKN**LWG*AAQMGTI 908
            +G             D     +V ++               W  ++   + G  A MG  
Sbjct: 237  RGKTRRLHFETSWLLDDECEAVVRES---------------WENSEGEVMTGRVASMGQC 281

Query: 909  PFWEYWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRR--------GTSRAPYQTRTNVA 1064
                     K + ++       LS A      E+  +             A ++    + 
Sbjct: 282  LVRWSTKKFKNLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLR 341

Query: 1065 SKGSNKLD*RRGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMI 1244
            S+ +   D  +  KY   FH  A+ RK            G W E    +  +F  YF  I
Sbjct: 342  SRVAEVKDGDKNTKY---FHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSI 398

Query: 1245 FSAE--TQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPAL 1418
            F++   + L +E  +  I   +T+E N  L  PF  DE++ AL QMHP K+PG D M  +
Sbjct: 399  FTSSNPSDLSLEAVMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVI 458

Query: 1419 FYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVF 1598
            FYQ+FW ++  DV   I NIL+ H SP  +N+T I LIPK KN      F PI+LCNV++
Sbjct: 459  FYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLY 518

Query: 1599 KIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNASWLLKFF 1727
            K+++K I  RLK  LP +I   QSAFVP RLITDNA   ++ F
Sbjct: 519  KLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIAMEVF 561



 Score = 79.0 bits (193), Expect(2) = 6e-97
 Identities = 37/71 (52%), Positives = 52/71 (73%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            L+A E+FH MKN    ++G+ A KLDM KAYDRVE  FLR ++L +G +  +VNL+M+ V
Sbjct: 555  LIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFV 614

Query: 1886 SSVFFSTLVNG 1918
            SSV +S ++NG
Sbjct: 615  SSVTYSFIING 625


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  344 bits (882), Expect = 9e-92
 Identities = 224/652 (34%), Positives = 323/652 (49%), Gaps = 4/652 (0%)
 Frame = +3

Query: 18   LSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDL 197
            LSWNCRG+G+P  +  L+ L+  ++P+ VFL ETKL + +ME++ K   +E M  +DC+ 
Sbjct: 5    LSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEG 64

Query: 198  NSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDK-DWQFSGIYGWPVEGEKYLTWE 374
                RRGGL ++W+S    ++ S S +H+  ++  E + +W+F+GIYG+P E  K  T  
Sbjct: 65   ECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEWRFTGIYGYPEEEHKDKTGA 124

Query: 375  LMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFI 554
            L+  LA      WLC GDFN +L   EK GG   ++ +   F   +++    DLGF G+ 
Sbjct: 125  LLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYE 184

Query: 555  YTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQWDRIWSEQG 734
            +TWTN + GD NIQERLDR + N  W   FP   V HL +  SDH P++     +   Q 
Sbjct: 185  FTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVAS---VKGAQS 241

Query: 735  PHXXXXXXXXXXXDVASRRIVSKNGATRMRWM-GDLYGINWLKAKN**LWG*AAQMGTIP 911
                         +    R    +   +  WM G   GIN  +  N        ++ +  
Sbjct: 242  AATRTKKSKRFRFEAMWLREGESDEVVKETWMRGTDAGINLARTAN--------KLLSWS 293

Query: 912  FWEYWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRRGTSRA-PYQTRTNVASKGSNKLD 1088
              ++ H  KE+ R        L  +    +    +R   +R    + R  V     ++ D
Sbjct: 294  KQKFGHVAKEI-RMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQD 352

Query: 1089 -*RRGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQL 1265
              + G K    FH+ A+ R+            G W E +  VT  F  YF+ +F +    
Sbjct: 353  WIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNC 412

Query: 1266 EMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLI 1445
            EM+  L  +  ++TDE+   L  PF+ +EV  AL+QMHP K+PG D M ALFYQ FW  I
Sbjct: 413  EMDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTI 472

Query: 1446 KLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIAN 1625
              DV   +LN+LN+ ++  ++N T IVLIPKKK+ E   +F PISLCNV++KI+ K +AN
Sbjct: 473  GEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAKVLAN 532

Query: 1626 RLKLVLPSLIHHTQSAFVPRRLITDNASWLLKFFIV*RIIKLGNVGLSLLNWIC*KPMIG 1805
            R+K+VLP +IH +QS FVP RLITDN     + F   R  K G  G   L     K    
Sbjct: 533  RMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDR 592

Query: 1806 LNVPFYVVSCFHXXXXXXXXXXXXXXXXXXXXXXXXXGQPGVSFSPSRGLRQ 1961
            +   F                                GQP  +F PSRGLRQ
Sbjct: 593  VEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQ 644


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score =  154 bits (390), Expect(4) = 7e-89
 Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)
 Frame = +3

Query: 9    MSCLSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 188
            MSCL+WNCRGLGN  TVQ L+ LI     + VFL ET+    KM  + +   F G     
Sbjct: 636  MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGF---- 691

Query: 189  CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMI--NNEDKDWQFSGIYGWPVEGEKY 362
              ++S  + GGL L W       +   +  ++   +  + ++  W  + +YG P    ++
Sbjct: 692  VGVSSEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRH 751

Query: 363  LTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGF 542
              W L+RT+  +    W+ +GDFNE L+ FE      +   +M  F + + D  L DLGF
Sbjct: 752  RMWSLLRTIRQSSALPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGF 811

Query: 543  DGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQW 710
             G  +T+ N ++G  N++ RLDR + + +W D+FP  QV HL    SDH P+L+++
Sbjct: 812  KGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLEF 867



 Score =  131 bits (330), Expect(4) = 7e-89
 Identities = 65/160 (40%), Positives = 97/160 (60%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ ++ A+  L  E        ++TD MNE L + F+ +E+ +A+ Q+ P KSP  D 
Sbjct: 1031 EYFQGVYKADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPRPDG 1090

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  +K D++  + N       P  +N T IVLIPKK     + ++ PISLC
Sbjct: 1091 FPARFYQRNWGTLKSDIILAVRNFFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLC 1150

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAF+  R+ITDNA
Sbjct: 1151 NVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNA 1190



 Score = 61.6 bits (148), Expect(4) = 7e-89
 Identities = 31/71 (43%), Positives = 44/71 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            LLAFE FH ++ NK     + A+KLD+ KAYDRV+  FL   +  LG    +V+ +M CV
Sbjct: 1191 LLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNKLGFAHRWVSWIMLCV 1250

Query: 1886 SSVFFSTLVNG 1918
            ++V +S   NG
Sbjct: 1251 TTVRYSVKFNG 1261



 Score = 51.6 bits (122), Expect(4) = 7e-89
 Identities = 29/138 (21%), Positives = 64/138 (46%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 930
            +K   +E +W ++    +++ +      +   L  +   +      L  W ++   N+G 
Sbjct: 877  QKCLHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWSKTKVKNVGK 936

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            +L+K+ +KL  L   +A  + I                ++E +W QR+R NW+K+GD+NT
Sbjct: 937  ELEKARKKLEDLIASNAARSSIRQATDHMNEMLY----REEMLWLQRSRVNWLKEGDRNT 992

Query: 1111 ALFFTKLLMEGRRVILSR 1164
              F ++ +   ++  +S+
Sbjct: 993  RFFHSRAVWRAKKNKISK 1010


>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
          Length = 720

 Score =  152 bits (385), Expect(4) = 2e-87
 Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 2/234 (0%)
 Frame = +3

Query: 9   MSCLSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 188
           M  ++WNCRGLGN   ++ L  +  ++DP  +FL ETKL   +++ +        + V D
Sbjct: 1   MKIIAWNCRGLGNGAAIRGLLNVQKEEDPDILFLSETKLDEHRIKGLRWKLGLTNVVVKD 60

Query: 189 CDLNSGSRRGGL*LMWKSMFDFKL-WSDSLHHLGRMINNEDKDWQFSGIYGWPVEGEKYL 365
           C      R GGL L W++  D  + W   L+    +   +   W+ +G YG P    K+L
Sbjct: 61  CV----GRSGGLALFWRTGVDVHVRWISRLYIDADVQEADSFSWRLTGFYGEPRTENKHL 116

Query: 366 TWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFD 545
           +W+ +RTL       WLC+GDFNEIL   EK GG  +    M  F   ++D  L+DLGF 
Sbjct: 117 SWKALRTLNAARRKPWLCLGDFNEILMGAEKEGGLPRGQACMDRFRSALEDCELSDLGFA 176

Query: 546 GFIYT-WTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
           G ++T W N  N +  ++ERLDR + N EW   FP Y+V +     SDH PV++
Sbjct: 177 GDLFTWWNNSHNSNEYVRERLDRAVANEEWRAHFPLYKVINGEPRHSDHRPVVV 230



 Score =  146 bits (369), Expect(4) = 2e-87
 Identities = 77/203 (37%), Positives = 118/203 (58%)
 Frame = +3

Query: 1095 RGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEME 1274
            +G +    FH+ A+ R+            G  VE    +  +   Y++ +F+      M+
Sbjct: 356  KGDRNTHFFHQYASERRKRSRIKRLVQDDGRVVEEDGELETLITNYYRNLFTTNAGDRMD 415

Query: 1275 GPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLD 1454
              L  +   +++EMN+ L R F  +EV + L  +   K+PG+D M +LFY+K W+++  D
Sbjct: 416  ELLQHVKQVVSNEMNDQLLRDFTEEEVRQGLDAIGDLKAPGADGMSSLFYKKHWNIVGAD 475

Query: 1455 VLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLK 1634
            V+  +LN LND   P   N T +VLIPK +N E + +  PISLCNV++KI +K ++NRLK
Sbjct: 476  VVREVLNFLNDGSMPAKWNETVVVLIPKVQNPERLKDLRPISLCNVIYKITSKVLSNRLK 535

Query: 1635 LVLPSLIHHTQSAFVPRRLITDN 1703
            L+LP +I   QSAFVP RLI+DN
Sbjct: 536  LILPEIISQNQSAFVPGRLISDN 558



 Score = 47.8 bits (112), Expect(4) = 2e-87
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGIN 1852
            L+A+E+ H ++N ++   G  A KLDM KAYDRVE  +L  +ML +G +
Sbjct: 560  LIAYEMTHYLQNKRSGGEGFAALKLDMSKAYDRVEWNYLEKIMLKMGFS 608



 Score = 47.4 bits (111), Expect(4) = 2e-87
 Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
 Frame = +1

Query: 748  GRKKFRFESMWLQDESCQKMVRQG*DGWVISM-GLIG-LKQKIDNCGVELLKWERSHFGN 921
            G + FRFE+ W+++E C  +V    + W   M G  G + + + +   +L  W R+  G+
Sbjct: 243  GGQSFRFEAHWVEEEQCAPIVE---NAWKTVMEGRRGTVMEAVQSVATDLGDWNRNVLGD 299

Query: 922  IGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGD 1101
            +  ++K+   K  +  +   ++   +               +++  W QRA+ +W+  GD
Sbjct: 300  LEKRMKQLR-KAMEACRRGPINEQSLRRMELLKFRWERLEEQKDLYWRQRAKAHWVSKGD 358

Query: 1102 KNTALF 1119
            +NT  F
Sbjct: 359  RNTHFF 364


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score =  142 bits (357), Expect(4) = 3e-84
 Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 2/236 (0%)
 Frame = +3

Query: 9   MSCLSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 188
           MSCL WNCRG+GN  TV+ L  L  +   + VFL ET+    +M  +       G    +
Sbjct: 1   MSCLIWNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVERMRRLRSRLGLRGFVGEN 60

Query: 189 CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKD--WQFSGIYGWPVEGEKY 362
           C+  SG    GL L W      ++   +  ++   +     D  W  + +YG P    ++
Sbjct: 61  CNGMSG----GLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGEPRVEHRH 116

Query: 363 LTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGF 542
             W ++ ++  + N  WL +GDFNE L+ FE    +++   +M  F +V+Q   L+DLGF
Sbjct: 117 RMWSMLNSIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGF 176

Query: 543 DGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQW 710
            G  YT+ N + G  N++ RLDR + +  W D+F + QV HL    S+HCPV++++
Sbjct: 177 KGLPYTYDNKREGINNVRVRLDRVVADDGWRDMFRSSQVEHLISPCSNHCPVVLKF 232



 Score =  129 bits (323), Expect(4) = 3e-84
 Identities = 65/160 (40%), Positives = 97/160 (60%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYFK +FSA+  L+       I  +++  MNE L   F+ +E+  A+ Q+ P K+PG D 
Sbjct: 396  EYFKEVFSADPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPLKAPGPDG 455

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  +K D++  +    +    P  +N T IVLIPK +    + +F PISLC
Sbjct: 456  FPARFYQRHWGFMKNDIVRAVKLFFDTGVMPEGVNDTAIVLIPKIEQPMELRDFRPISLC 515

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NV++K+++K + NRL+ +L  L+   QSAFV  R+ITDNA
Sbjct: 516  NVIYKVVSKCLVNRLRPILDELVSPCQSAFVLGRMITDNA 555



 Score = 60.5 bits (145), Expect(4) = 3e-84
 Identities = 30/79 (37%), Positives = 46/79 (58%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            +LAFE FH ++ N+  +  + A+KLD+ KAYDRV+  FL   +  LG    +V  +M C+
Sbjct: 556  ILAFECFHSIQKNRKPESAACAYKLDLSKAYDRVDWGFLEQSLYKLGFAHRWVRWIMVCI 615

Query: 1886 SSVFFSTLVNGPTWC*FFP 1942
            ++V +S   NG     F P
Sbjct: 616  TTVRYSVKFNGTLLSTFAP 634



 Score = 52.4 bits (124), Expect(4) = 3e-84
 Identities = 29/133 (21%), Positives = 59/133 (44%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 930
            RK   +E  W ++    +++ +          L  + + +     +L  W R    N+G 
Sbjct: 242  RKCLHYEIFWEREAELVEVIDESWAALGDKSDLADISRALSQVMAKLHSWSRRKCKNVGR 301

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            +++K  ++L +L +  A    I                ++E +W QR+R NW+K+GD+NT
Sbjct: 302  EIEKGRKRLAELIESGADSRSIRSASDNLHELLY----REEMLWLQRSRVNWLKEGDRNT 357

Query: 1111 ALFFTKLLMEGRR 1149
              F +K +   ++
Sbjct: 358  RFFHSKAVWRAKK 370



 Score =  125 bits (313), Expect(3) = 3e-48
 Identities = 64/160 (40%), Positives = 96/160 (60%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYFK +FSA+  L+       I  +++  MNE L   F+ +E+  A+ Q+ P K+ G D 
Sbjct: 1094 EYFKEVFSADPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPLKALGPDG 1153

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  +K D++  +    +    P  +N T IVLIPK +    + +F PISLC
Sbjct: 1154 FPARFYQRHWGFMKNDIVRAVKLFFDTGVMPEGVNDTAIVLIPKIEQPMELRDFRPISLC 1213

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NV++K+++K + NRL+ +L  L+   QSAFV  R+ITDNA
Sbjct: 1214 NVIYKVVSKCLVNRLRPILDELVSPCQSAFVLGRMITDNA 1253



 Score = 60.5 bits (145), Expect(3) = 3e-48
 Identities = 30/79 (37%), Positives = 46/79 (58%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            +LAFE FH ++ N+  +  + A+KLD+ KAYDRV+  FL   +  LG    +V  +M C+
Sbjct: 1254 ILAFECFHSIQKNRKPESAACAYKLDLSKAYDRVDWGFLEQSLYKLGFAHRWVRWIMVCI 1313

Query: 1886 SSVFFSTLVNGPTWC*FFP 1942
            ++V +S   NG     F P
Sbjct: 1314 TTVRYSVKFNGTLLSTFAP 1332



 Score = 56.6 bits (135), Expect(3) = 3e-48
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
 Frame = +1

Query: 700  LFSGIEYGQNKGHIDGGRKKFRFESMWLQDESCQKMVRQG*DGWVIS---MGLIGLKQKI 870
            L  GI +    G     RK   +E  W ++    +++ +    W  S     L  + + +
Sbjct: 923  LKEGIIWRIGNGKSPARRKCLHYEIFWEREAELVEVIDES---WAASGDKSDLADISRAL 979

Query: 871  DNCGVELLKWERSHFGNIGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQ 1050
                 +L  W R    N+G +++K  ++L +L +  A  T I                ++
Sbjct: 980  SQVMAKLHSWSRRKCKNVGREIEKGRKRLAELIESGADSTSIRSASDNLHELLY----RE 1035

Query: 1051 EQMWHQRARTNWIKDGDKNTALFFTKLLMEGRR 1149
            E +W QR+R NW+K+GD+NT  F +K +   ++
Sbjct: 1036 EMLWLQRSRVNWLKEGDRNTRFFHSKAVWRAKK 1068


>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
          Length = 1765

 Score =  136 bits (342), Expect(4) = 5e-84
 Identities = 70/160 (43%), Positives = 98/160 (61%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ +++A+  L  E     I  ++TD MNE L   F  DE+ +A+ Q+ P KSPG D 
Sbjct: 866  EYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQIGPLKSPGPDG 925

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  IK D++  +         P  +N T IVLIPKK+    + +F PISLC
Sbjct: 926  FPARFYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLC 985

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAFV  R+ITDNA
Sbjct: 986  NVVYKVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNA 1025



 Score =  119 bits (298), Expect(4) = 5e-84
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
 Frame = +3

Query: 57   VQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*LMW 236
            V+ L  L  +   + VFL ET+    KM  +       G       ++S    GGL L W
Sbjct: 487  VRDLCALSKEASSRLVFLCETRQSVEKMSRLRGRLGLRGF----TGVSSEGMSGGLALYW 542

Query: 237  KSMFDFKLWSDSLHHLGRMI--NNEDKDWQFSGIYGWPVEGEKYLTWELMRTLANNMNSQ 410
                   +   +  ++   +  + E+  W  + +YG P    ++  W L+RT+  + +  
Sbjct: 543  DESVSVDVKDINKRYIDAYVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLP 602

Query: 411  WLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIYTWTNGQNGDGN 590
            W  +GDFNE ++ FE      +   +M +F +V+QD  L+DLGF G  +T+ N + G  N
Sbjct: 603  WAVIGDFNETMWQFEHFSRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHTYDNKREGWRN 662

Query: 591  IQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
            ++ RLDR + + +W DI+   QV HL    SDHCP+L+
Sbjct: 663  VKVRLDRVVADDKWRDIYSTAQVVHLVSPCSDHCPILL 700



 Score = 69.3 bits (168), Expect(4) = 5e-84
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            LLAFE FH M+ NK     + A+KLD+ KAYDRV+  FL   M  LG    +VN +MKCV
Sbjct: 1026 LLAFECFHAMQKNKKANHAACAYKLDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCV 1085

Query: 1886 SSVFFSTLVNG 1918
            +SV +    NG
Sbjct: 1086 TSVRYMVKFNG 1096



 Score = 58.2 bits (139), Expect(4) = 5e-84
 Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVIS---MGLIGLKQKIDNCGVELLKWERSHFGN 921
            +K   +E +W ++    +++ +    WV++     L  + + +      L  W R+   N
Sbjct: 712  QKCLHYEIVWEREPEATQVIEEA---WVVAGEKADLGDINKALAKVMTALRSWSRAKVKN 768

Query: 922  IGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGD 1101
            +G +L+K+ +KL +L + +A  T+I                ++E +W QR+R NW+KD D
Sbjct: 769  VGRELEKARKKLAELIESNADRTVIRNATDHMNELLY----REEMLWLQRSRVNWLKDED 824

Query: 1102 KNTALFFTKLLMEGRRVILSR 1164
            +NT  F ++ +   ++  +S+
Sbjct: 825  RNTKFFHSRAVWRAKKNKISK 845


>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
          Length = 2367

 Score =  136 bits (342), Expect(4) = 1e-81
 Identities = 70/160 (43%), Positives = 98/160 (61%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ +++A+  L  E     I  ++TD MNE L   F  DE+ +A+ Q+ P KSPG D 
Sbjct: 1125 EYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQIGPLKSPGPDG 1184

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  IK D++  +         P  +N T IVLIPKK+    + +F PISLC
Sbjct: 1185 FPARFYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLC 1244

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAFV  R+ITDNA
Sbjct: 1245 NVVYKVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNA 1284



 Score =  111 bits (278), Expect(4) = 1e-81
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
 Frame = +3

Query: 195  LNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMI--NNEDKDWQFSGIYGWPVEGEKYLT 368
            ++S    GGL L W       +   +  ++   +  + E+  W  + +YG P    ++  
Sbjct: 788  VSSEGMSGGLALYWDESVSVDVKDINKRYIDAYVQLSPEEPQWHVTFVYGEPRVENRHRM 847

Query: 369  WELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDG 548
            W L+RT+  + +  W  +GDFNE ++ FE      +   +M +F +V+QD  L+DLGF G
Sbjct: 848  WSLLRTIHQSSSLPWAVIGDFNETMWQFEHFSRTPRGEPQMQDFRDVLQDCELHDLGFKG 907

Query: 549  FIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
              +T+ N + G  N++ RLDR + + +W DI+   QV HL    SDHCP+L+
Sbjct: 908  VPHTYDNKREGWRNVKVRLDRVVADDKWRDIYSTAQVVHLVSPCSDHCPILL 959



 Score = 69.3 bits (168), Expect(4) = 1e-81
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            LLAFE FH M+ NK     + A+KLD+ KAYDRV+  FL   M  LG    +VN +MKCV
Sbjct: 1285 LLAFECFHAMQKNKKANHAACAYKLDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCV 1344

Query: 1886 SSVFFSTLVNG 1918
            +SV +    NG
Sbjct: 1345 TSVRYMVKFNG 1355



 Score = 58.2 bits (139), Expect(4) = 1e-81
 Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVIS---MGLIGLKQKIDNCGVELLKWERSHFGN 921
            +K   +E +W ++    +++ +    WV++     L  + + +      L  W R+   N
Sbjct: 971  QKCLHYEIVWEREPEATQVIEEA---WVVAGEKADLGDINKALAKVMTALRSWSRAKVKN 1027

Query: 922  IGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGD 1101
            +G +L+K+ +KL +L + +A  T+I                ++E +W QR+R NW+KD D
Sbjct: 1028 VGRELEKARKKLAELIESNADRTVIRNATDHMNELLY----REEMLWLQRSRVNWLKDED 1083

Query: 1102 KNTALFFTKLLMEGRRVILSR 1164
            +NT  F ++ +   ++  +S+
Sbjct: 1084 RNTKFFHSRAVWRAKKNKISK 1104


>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
            gi|108862221|gb|ABA96496.2| retrotransposon protein,
            putative, unclassified, expressed [Oryza sativa Japonica
            Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
            sativa Japonica Group]
          Length = 1764

 Score =  136 bits (342), Expect(4) = 1e-81
 Identities = 70/160 (43%), Positives = 98/160 (61%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ +++A+  L  E     I  ++TD MNE L   F  DE+ +A+ Q+ P KSPG D 
Sbjct: 522  EYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQIGPLKSPGPDG 581

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  IK D++  +         P  +N T IVLIPKK+    + +F PISLC
Sbjct: 582  FPARFYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLC 641

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAFV  R+ITDNA
Sbjct: 642  NVVYKVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNA 681



 Score =  111 bits (278), Expect(4) = 1e-81
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
 Frame = +3

Query: 195 LNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMI--NNEDKDWQFSGIYGWPVEGEKYLT 368
           ++S    GGL L W       +   +  ++   +  + E+  W  + +YG P    ++  
Sbjct: 185 VSSEGMSGGLALYWDESVSVDVKDINKRYIDAYVQLSPEEPQWHVTFVYGEPRVENRHRM 244

Query: 369 WELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDG 548
           W L+RT+  + +  W  +GDFNE ++ FE      +   +M +F +V+QD  L+DLGF G
Sbjct: 245 WSLLRTIHQSSSLPWAVIGDFNETMWQFEHFSRTPRGEPQMQDFRDVLQDCELHDLGFKG 304

Query: 549 FIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
             +T+ N + G  N++ RLDR + + +W DI+   QV HL    SDHCP+L+
Sbjct: 305 VPHTYDNKREGWRNVKVRLDRVVADDKWRDIYSTAQVVHLVSPCSDHCPILL 356



 Score = 69.3 bits (168), Expect(4) = 1e-81
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            LLAFE FH M+ NK     + A+KLD+ KAYDRV+  FL   M  LG    +VN +MKCV
Sbjct: 682  LLAFECFHAMQKNKKANHAACAYKLDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCV 741

Query: 1886 SSVFFSTLVNG 1918
            +SV +    NG
Sbjct: 742  TSVRYMVKFNG 752



 Score = 58.2 bits (139), Expect(4) = 1e-81
 Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVIS---MGLIGLKQKIDNCGVELLKWERSHFGN 921
            +K   +E +W ++    +++ +    WV++     L  + + +      L  W R+   N
Sbjct: 368  QKCLHYEIVWEREPEATQVIEEA---WVVAGEKADLGDINKALAKVMTALRSWSRAKVKN 424

Query: 922  IGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGD 1101
            +G +L+K+ +KL +L + +A  T+I                ++E +W QR+R NW+KD D
Sbjct: 425  VGRELEKARKKLAELIESNADRTVIRNATDHMNELLY----REEMLWLQRSRVNWLKDED 480

Query: 1102 KNTALFFTKLLMEGRRVILSR 1164
            +NT  F ++ +   ++  +S+
Sbjct: 481  RNTKFFHSRAVWRAKKNKISK 501


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score =  151 bits (382), Expect(3) = 1e-80
 Identities = 86/234 (36%), Positives = 129/234 (55%), Gaps = 2/234 (0%)
 Frame = +3

Query: 9    MSCLSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 188
            M  ++WNCRGLGN  TV+ L  L  + DP  +FL  TK+ T K++          + V D
Sbjct: 448  MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 507

Query: 189  CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDW-QFSGIYGWPVEGEKYL 365
            C      + GGL + WK   + +L + S   +   +  +D  W +F+G+YG P   +K L
Sbjct: 508  CQ----GKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDL 563

Query: 366  TWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFD 545
            TW+ +RTL       WLCVGDFNE+L+++EK  G  K  + M  F + +    L++LGF 
Sbjct: 564  TWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFT 623

Query: 546  GFIYTWTNGQ-NGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
            G  +TW N     DG I+ERLDR + + +W   FP+++V   +   SDH PV++
Sbjct: 624  GDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIV 677



 Score =  140 bits (354), Expect(3) = 1e-80
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
 Frame = +3

Query: 1095 RGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEME 1274
            +G +    FH+ A+ RK            G  +  + G   +  E++K +F+A   L ++
Sbjct: 803  KGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLD 862

Query: 1275 GPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSP-GSDSMPALFYQKFWSLIKL 1451
              L  +  R+T  MN+ L +    +E+ KAL  +   K+P GSD MPALFY++FW  +  
Sbjct: 863  ELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWECVGD 922

Query: 1452 DVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRL 1631
            D++  + + L   E P S N T +VLIPK  N E + +  PISLCNVV+KI +K +ANRL
Sbjct: 923  DIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRL 982

Query: 1632 KLVLPSLIHHTQSAFVPRRLITDN 1703
            K +L  +I   Q AFVP+R+ITDN
Sbjct: 983  KPLLSEIISPIQIAFVPQRMITDN 1006



 Score = 58.2 bits (139), Expect(3) = 1e-80
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
 Frame = +1

Query: 742  DGGRKK--FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLK--QKIDNCGVELLKWERS 909
            +GGR K  FRFE+ W ++E C  +V    + W +S+G  G K    I      L  W ++
Sbjct: 686  NGGRSKPGFRFEAGWAREEHCAPIVE---NAWKLSVGPRGGKVMDAIREVAANLWDWSKN 742

Query: 910  HFGNIGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWI 1089
              G++  ++KK+++ L +  + S + +                  ++E  W QRA  +W+
Sbjct: 743  FLGDLEKRIKKAKQAL-EAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQRANQHWL 801

Query: 1090 KDGDKNTALF 1119
            + GD+NT  F
Sbjct: 802  EKGDRNTKFF 811



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 38/88 (43%), Positives = 50/88 (56%)
 Frame = +2

Query: 1655 SPYAVCFCPSSSYH**RLLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVM 1834
            SP  + F P        LLA+E+ H +K  +    G  A K  M KAYDRVE  FL  +M
Sbjct: 991  SPIQIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMM 1050

Query: 1835 LPLGINESFVNLVMKCVSSVFFSTLVNG 1918
            L LG + ++V +VMKCV+SV +   VNG
Sbjct: 1051 LKLGFDRNWVFIVMKCVTSVTYRIKVNG 1078


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score =  151 bits (382), Expect(3) = 1e-80
 Identities = 86/234 (36%), Positives = 129/234 (55%), Gaps = 2/234 (0%)
 Frame = +3

Query: 9    MSCLSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLD 188
            M  ++WNCRGLGN  TV+ L  L  + DP  +FL  TK+ T K++          + V D
Sbjct: 425  MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 484

Query: 189  CDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDW-QFSGIYGWPVEGEKYL 365
            C      + GGL + WK   + +L + S   +   +  +D  W +F+G+YG P   +K L
Sbjct: 485  CQ----GKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDL 540

Query: 366  TWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFD 545
            TW+ +RTL       WLCVGDFNE+L+++EK  G  K  + M  F + +    L++LGF 
Sbjct: 541  TWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFT 600

Query: 546  GFIYTWTNGQ-NGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
            G  +TW N     DG I+ERLDR + + +W   FP+++V   +   SDH PV++
Sbjct: 601  GDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIV 654



 Score =  140 bits (354), Expect(3) = 1e-80
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
 Frame = +3

Query: 1095 RGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEME 1274
            +G +    FH+ A+ RK            G  +  + G   +  E++K +F+A   L ++
Sbjct: 780  KGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLD 839

Query: 1275 GPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSP-GSDSMPALFYQKFWSLIKL 1451
              L  +  R+T  MN+ L +    +E+ KAL  +   K+P GSD MPALFY++FW  +  
Sbjct: 840  ELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWECVGD 899

Query: 1452 DVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRL 1631
            D++  + + L   E P S N T +VLIPK  N E + +  PISLCNVV+KI +K +ANRL
Sbjct: 900  DIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRL 959

Query: 1632 KLVLPSLIHHTQSAFVPRRLITDN 1703
            K +L  +I   Q AFVP+R+ITDN
Sbjct: 960  KPLLSEIISPIQIAFVPQRMITDN 983



 Score = 58.2 bits (139), Expect(3) = 1e-80
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
 Frame = +1

Query: 742  DGGRKK--FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLK--QKIDNCGVELLKWERS 909
            +GGR K  FRFE+ W ++E C  +V    + W +S+G  G K    I      L  W ++
Sbjct: 663  NGGRSKPGFRFEAGWAREEHCAPIVE---NAWKLSVGPRGGKVMDAIREVAANLWDWSKN 719

Query: 910  HFGNIGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWI 1089
              G++  ++KK+++ L +  + S + +                  ++E  W QRA  +W+
Sbjct: 720  FLGDLEKRIKKAKQAL-EAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQRANQHWL 778

Query: 1090 KDGDKNTALF 1119
            + GD+NT  F
Sbjct: 779  EKGDRNTKFF 788



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 38/88 (43%), Positives = 50/88 (56%)
 Frame = +2

Query: 1655 SPYAVCFCPSSSYH**RLLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVM 1834
            SP  + F P        LLA+E+ H +K  +    G  A K  M KAYDRVE  FL  +M
Sbjct: 968  SPIQIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMM 1027

Query: 1835 LPLGINESFVNLVMKCVSSVFFSTLVNG 1918
            L LG + ++V +VMKCV+SV +   VNG
Sbjct: 1028 LKLGFDRNWVFIVMKCVTSVTYRIKVNG 1055


>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score =  135 bits (339), Expect(4) = 5e-79
 Identities = 66/160 (41%), Positives = 98/160 (61%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ ++ A+  L  E        ++TD MNE L + F+ +E+ +A+ Q+ P KSPG D 
Sbjct: 943  EYFQEVYKADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPGPDG 1002

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  +K D++  + N       P  +N T IVLIPKK     + ++ PISLC
Sbjct: 1003 FPARFYQRNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLC 1062

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAF+  R+ITDNA
Sbjct: 1063 NVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNA 1102



 Score =  118 bits (295), Expect(4) = 5e-79
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
 Frame = +3

Query: 96   KFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSL 275
            + VFL ET+    KM  + +   F G       ++S    GGL L W       +   + 
Sbjct: 577  QLVFLCETRQSVEKMSRLRRKLAFRGF----VGVSSEGMSGGLALYWDESVSVDVKDINK 632

Query: 276  HHLGRMI--NNEDKDWQFSGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYT 449
             ++   +  ++++  W  + +YG P    ++  W L+RT+  +    W+ +GDFNE L+ 
Sbjct: 633  RYIDAYVRLSSDEPQWHITFVYGEPRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQ 692

Query: 450  FEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*E 629
            FE      +   +M  F + + D  L DLGF G  +T+ N ++G  N++ RLDR + + +
Sbjct: 693  FEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDK 752

Query: 630  WVDIFPNYQVYHLNRVASDHCPVLIQW 710
            W D+FP  QV HL    SDH P+L+++
Sbjct: 753  WRDLFPEAQVSHLVSPCSDHSPILLEF 779



 Score = 62.4 bits (150), Expect(4) = 5e-79
 Identities = 31/71 (43%), Positives = 44/71 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            LLAFE FH ++ NK     + A+KLD+ KAYDRV+  FL   +  LG    +V+ +M CV
Sbjct: 1103 LLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNKLGFAHRWVSWIMSCV 1162

Query: 1886 SSVFFSTLVNG 1918
            ++V +S   NG
Sbjct: 1163 TTVRYSVKFNG 1173



 Score = 50.8 bits (120), Expect(4) = 5e-79
 Identities = 29/138 (21%), Positives = 64/138 (46%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 930
            +K   +E +W ++    +++ +      +   L  +   +      L  W ++   N+G 
Sbjct: 789  QKCLHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWGKTKVKNVGR 848

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            +L+K+ +KL  L   +A  + I                ++E +W QR+R NW+K+GD+NT
Sbjct: 849  ELEKARKKLEDLIASNAARSSIRQATDHMNEMLY----REEMLWLQRSRVNWLKEGDRNT 904

Query: 1111 ALFFTKLLMEGRRVILSR 1164
              F ++ +   ++  +S+
Sbjct: 905  RFFHSRAVWRAKKNKISK 922


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score =  137 bits (345), Expect(4) = 3e-76
 Identities = 73/231 (31%), Positives = 120/231 (51%)
 Frame = +3

Query: 18  LSWNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDL 197
           +SWNC+GL NP T++ LK +  D  P  +FLMETK     +  +     ++ +H ++ + 
Sbjct: 3   ISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPE- 61

Query: 198 NSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFSGIYGWPVEGEKYLTWEL 377
               R GGL + WKS  + +      + +   +++ +K W  S +YG PV   +   WE 
Sbjct: 62  ---GRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEH 118

Query: 378 MRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIY 557
           + ++       W  +GDFN+I    EK GG ++  +    F  ++ +  +++LG  G  +
Sbjct: 119 LNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSF 178

Query: 558 TWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQW 710
           TW  G   D  +Q +LDRC GN  W  IFPN   + L +  SDH PVL+++
Sbjct: 179 TW-GGNRNDQWVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLVKF 228



 Score =  114 bits (284), Expect(4) = 3e-76
 Identities = 60/163 (36%), Positives = 94/163 (57%)
 Frame = +3

Query: 1215 RVFEEYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSP 1394
            ++   +F+ +F++   L     L  +  ++T EMN  L +     EV  A+  ++   +P
Sbjct: 386  KIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVFSINKESAP 445

Query: 1395 GSDSMPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*P 1574
            G D   ALF+Q+ W L+K  +L  I         P   NHT I LIPK  + + +++  P
Sbjct: 446  GPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRP 505

Query: 1575 ISLCNVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDN 1703
            ISLC+V++KII+K +  RLK  LP+++  TQSAFVP+RLI+DN
Sbjct: 506  ISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDN 548



 Score = 71.6 bits (174), Expect(4) = 3e-76
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            L+A E+ H ++ N    +   AFK DM KAYDRVE PFL  +M  LG N  +++ +M CV
Sbjct: 550  LVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCV 609

Query: 1886 SSVFFSTLVNG 1918
            +SV +S L+NG
Sbjct: 610  TSVSYSVLING 620



 Score = 34.3 bits (77), Expect(4) = 3e-76
 Identities = 25/123 (20%), Positives = 48/123 (39%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 930
            R +FR++     D  C +++ +  +   +S G       +  C   +  W+ S   N   
Sbjct: 236  RGQFRYDKRLDDDPYCIEVIHRSWNS-AMSQGTHSSFFSLIECRRAISVWKHSSDTNAQS 294

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            ++K+  + L   D   ++                  +  +E  W Q++R  W+  GDKNT
Sbjct: 295  RIKRLRKDL---DAEKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNT 351

Query: 1111 ALF 1119
              F
Sbjct: 352  GFF 354


>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
            gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza
            sativa Indica Group] gi|116309230|emb|CAH66320.1|
            OSIGBa0150M16.3 [Oryza sativa Indica Group]
          Length = 1711

 Score =  135 bits (339), Expect(4) = 2e-74
 Identities = 66/160 (41%), Positives = 98/160 (61%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ ++ A+  L  E        ++TD MNE L + F+ +E+ +A+ Q+ P KSPG D 
Sbjct: 943  EYFQEVYKADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPGPDG 1002

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  +K D++  + N       P  +N T IVLIPKK     + ++ PISLC
Sbjct: 1003 FPARFYQRNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLC 1062

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAF+  R+ITDNA
Sbjct: 1063 NVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNA 1102



 Score =  118 bits (295), Expect(4) = 2e-74
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
 Frame = +3

Query: 96   KFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSL 275
            + VFL ET+    KM  + +   F G       ++S    GGL L W       +   + 
Sbjct: 577  QLVFLCETRQSVEKMSRLRRKLAFRGF----VGVSSEGMSGGLALYWDESVSVDVKDINK 632

Query: 276  HHLGRMI--NNEDKDWQFSGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYT 449
             ++   +  ++++  W  + +YG P    ++  W L+RT+  +    W+ +GDFNE L+ 
Sbjct: 633  RYIDAYVRLSSDEPQWHITFVYGEPRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQ 692

Query: 450  FEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*E 629
            FE      +   +M  F + + D  L DLGF G  +T+ N ++G  N++ RLDR + + +
Sbjct: 693  FEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDK 752

Query: 630  WVDIFPNYQVYHLNRVASDHCPVLIQW 710
            W D+FP  QV HL    SDH P+L+++
Sbjct: 753  WRDLFPEAQVSHLVSPCSDHSPILLEF 779



 Score = 50.8 bits (120), Expect(4) = 2e-74
 Identities = 29/138 (21%), Positives = 64/138 (46%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 930
            +K   +E +W ++    +++ +      +   L  +   +      L  W ++   N+G 
Sbjct: 789  QKCLHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWGKTKVKNVGR 848

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            +L+K+ +KL  L   +A  + I                ++E +W QR+R NW+K+GD+NT
Sbjct: 849  ELEKARKKLEDLIASNAARSSIRQATDHMNEMLY----REEMLWLQRSRVNWLKEGDRNT 904

Query: 1111 ALFFTKLLMEGRRVILSR 1164
              F ++ +   ++  +S+
Sbjct: 905  RFFHSRAVWRAKKNKISK 922



 Score = 46.6 bits (109), Expect(4) = 2e-74
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLG 1846
            LLAFE FH ++ NK     + A+KLD+ KAYDRV+  FL   +  LG
Sbjct: 1103 LLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNKLG 1149


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  132 bits (331), Expect(4) = 4e-74
 Identities = 69/196 (35%), Positives = 109/196 (55%)
 Frame = +3

Query: 1119 FHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAINL 1298
            FH  A+ R             G+    +  +  +   +F+ +++ +  L     L   + 
Sbjct: 340  FHLKASWRAKKNKIKKLKKNDGSTTMNKKEMKEINRSFFQQLYTKDDNLNPVNLLNMFHE 399

Query: 1299 RMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILNI 1478
            +++++MN  L +PF  +E+  AL Q+ P K+PG D  PA F Q+ W L+K +V+  + N 
Sbjct: 400  KISEQMNADLIKPFTNEEISDALFQIGPLKAPGPDGFPARFLQRNWGLLKGEVIAAVRNF 459

Query: 1479 LNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLIH 1658
              D      +N T IV+IPKK  AE + +F PISLCNVV+K++ K + NR++ +L  +I 
Sbjct: 460  FEDEVMQEGVNDTVIVMIPKKNLAEDMKDFRPISLCNVVYKVVAKCLVNRMRPMLQEIIS 519

Query: 1659 HTQSAFVPRRLITDNA 1706
              QSAF+P RLITDNA
Sbjct: 520  EAQSAFIPGRLITDNA 535



 Score =  115 bits (289), Expect(4) = 4e-74
 Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 2/207 (0%)
 Frame = +3

Query: 93  PKFVFLMETKLVTAKMENILKDTDFEGMHVLDC-DLNSGSRRGGL*LMWKSMFDFKLWSD 269
           PK VFL ET+     ++N +         +  C  +N   + GGL L W    +  L S 
Sbjct: 12  PKIVFLAETRQDQYMVQNRIG--------LRRCFTVNGVGKGGGLALFWDESMNVVLKSY 63

Query: 270 SLHHLGRMINNEDK-DWQFSGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILY 446
           +  H+  +I   D   W+ + +YG P   +++L W L+R + +N    WL +GDFNE ++
Sbjct: 64  NSRHIDVLITELDCCTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMW 123

Query: 447 TFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN* 626
             E    R++  ++M +F EV+ +  L+D+GF G  +T+ N Q    N++ RLDR + + 
Sbjct: 124 QTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVASP 183

Query: 627 EWVDIFPNYQVYHLNRVASDHCPVLIQ 707
            W   FP   + HL   +SDH P+L++
Sbjct: 184 AWSSRFPQAVITHLTTPSSDHAPLLLE 210



 Score = 52.8 bits (125), Expect(4) = 4e-74
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVM 1876
            L+AFE FH +KN K   +   A KLD+ KAYDRV+  FL GVM  LG  + +   +M
Sbjct: 536  LIAFECFHSIKNCKRENQNFCALKLDLSKAYDRVDWEFLNGVMERLGFCDKWRRWIM 592



 Score = 49.3 bits (116), Expect(4) = 4e-74
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
 Frame = +1

Query: 754  KKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQ 933
            K  R+E +W ++ S  +++++       +  L  +  K+     +L+ W +   GN+  +
Sbjct: 221  KIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKK 280

Query: 934  LKKSEEKLYKL------DQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKD 1095
            +K   EKL +L      D  + +H++               H ++E  W QR+R  W+K+
Sbjct: 281  IKDLREKLGELRNIGLLDTDNEVHSV-------KKELEEMLH-REEIWWKQRSRITWLKE 332

Query: 1096 GDKNTALFFTK 1128
            GD NT  F  K
Sbjct: 333  GDLNTRYFHLK 343


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  132 bits (332), Expect(4) = 3e-73
 Identities = 69/196 (35%), Positives = 109/196 (55%)
 Frame = +3

Query: 1119 FHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEMEGPLGAINL 1298
            FH  A+ R             G+    +  +  +   +F+ +++ +  L     L   + 
Sbjct: 315  FHLKASWRAKKNKIKKLKKNDGSTTMNKKEMKEISRSFFQQLYTKDDNLNPVNLLNMFHE 374

Query: 1299 RMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLDVLDVILNI 1478
            +++++MN  L +PF  +E+  AL Q+ P K+PG D  PA F Q+ W L+K +V+  + N 
Sbjct: 375  KISEQMNADLIKPFTDEEISDALFQIGPLKAPGPDGFPARFLQRNWGLLKGEVIAAVRNF 434

Query: 1479 LNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLKLVLPSLIH 1658
              D      +N T IV+IPKK  AE + +F PISLCNVV+K++ K + NR++ +L  +I 
Sbjct: 435  FEDEVMQEGVNDTVIVMIPKKNLAEDMKDFRPISLCNVVYKVVAKCLVNRMRPMLQEIIS 494

Query: 1659 HTQSAFVPRRLITDNA 1706
              QSAF+P RLITDNA
Sbjct: 495  EAQSAFIPGRLITDNA 510



 Score =  112 bits (280), Expect(4) = 3e-73
 Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
 Frame = +3

Query: 195 LNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDK-DWQFSGIYGWPVEGEKYLTW 371
           +N   + GGL L W    +  L S +  H+  +I   D   W+ + +YG P   +++L W
Sbjct: 14  VNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCCTWRATFLYGEPRAQDRHLMW 73

Query: 372 ELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGF 551
            L+R + +N    WL +GDFNE ++  E    R++  ++M +F EV+ +  L+D+GF G 
Sbjct: 74  SLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGA 133

Query: 552 IYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQ 707
            +T+ N Q    N++ RLDR + +  W   FP   + HL   +SDH P+L++
Sbjct: 134 PWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLE 185



 Score = 52.8 bits (125), Expect(4) = 3e-73
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVM 1876
            L+AFE FH +KN K   +   A KLD+ KAYDRV+  FL GVM  LG  + +   +M
Sbjct: 511  LIAFECFHSIKNCKRENQNFCALKLDLSKAYDRVDWEFLNGVMERLGFCDKWRRWIM 567



 Score = 49.3 bits (116), Expect(4) = 3e-73
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
 Frame = +1

Query: 754  KKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGIQ 933
            K  R+E +W ++ S  +++++       +  L  +  K+     +L+ W +   GN+  +
Sbjct: 196  KIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKK 255

Query: 934  LKKSEEKLYKL------DQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKD 1095
            +K   EKL +L      D  + +H++               H ++E  W QR+R  W+K+
Sbjct: 256  IKDLREKLGELRNIGLLDTDNEVHSV-------KKELEEMLH-REEIWWKQRSRITWLKE 307

Query: 1096 GDKNTALFFTK 1128
            GD NT  F  K
Sbjct: 308  GDLNTRYFHLK 318


>gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group]
          Length = 1296

 Score =  135 bits (339), Expect(4) = 5e-70
 Identities = 66/160 (41%), Positives = 98/160 (61%)
 Frame = +3

Query: 1227 EYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDS 1406
            EYF+ ++ A+  L  E        ++TD MNE L + F+ +E+ +A+ Q+ P KSPG D 
Sbjct: 768  EYFQEVYKADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPGPDG 827

Query: 1407 MPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLC 1586
             PA FYQ+ W  +K D++  + N       P  +N T IVLIPKK     + ++ PISLC
Sbjct: 828  FPARFYQRNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLC 887

Query: 1587 NVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDNA 1706
            NVV+K+++K + NRL+ +L  L+   QSAF+  R+ITDNA
Sbjct: 888  NVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNA 927



 Score =  102 bits (254), Expect(4) = 5e-70
 Identities = 46/139 (33%), Positives = 78/139 (56%)
 Frame = +3

Query: 294 INNEDKDWQFSGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQ 473
           ++ ++  W  + +YG      ++  W L+RT+  +    W+ +GDFNE L+ FE      
Sbjct: 466 LSPDEPQWHITFVYGETRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFEHFSKNP 525

Query: 474 KDANKMLEFHEVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNY 653
           +   +M  F + + D  L DLGF G  +T+ N ++G  N++ RLDR + + +W D+FP  
Sbjct: 526 RCETQMQNFRDALYDCDLQDLGFKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEA 585

Query: 654 QVYHLNRVASDHCPVLIQW 710
           QV HL    SDH P+L+++
Sbjct: 586 QVSHLVSPCSDHSPILLEF 604



 Score = 52.8 bits (125), Expect(4) = 5e-70
 Identities = 30/138 (21%), Positives = 65/138 (47%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*DGWVISMGLIGLKQKIDNCGVELLKWERSHFGNIGI 930
            +K  R+E +W ++    +++ +      +   L  +   +      L  W ++   N+G 
Sbjct: 614  QKCLRYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWGKTKVKNVGR 673

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            +L+K+ +KL  L   +A  + I                ++E +W QR+R NW+K+GD+NT
Sbjct: 674  ELEKARKKLEDLIASNAARSSIRQATDHMNEMLY----REEMLWLQRSRVNWLKEGDRNT 729

Query: 1111 ALFFTKLLMEGRRVILSR 1164
              F ++ +   ++  +S+
Sbjct: 730  RFFHSRAVWRAKKNKISK 747



 Score = 45.8 bits (107), Expect(4) = 5e-70
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLG 1846
            LLAFE FH ++ NK     + A+KLD+ KAYDRV+  FL   +  LG
Sbjct: 928  LLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELPLNKLG 974


>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
          Length = 825

 Score =  140 bits (354), Expect(3) = 9e-70
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
 Frame = +3

Query: 1095 RGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEME 1274
            +G +    FH+ A+ RK            G  +  + G   +  E++K +F+A   L ++
Sbjct: 304  KGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLD 363

Query: 1275 GPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSP-GSDSMPALFYQKFWSLIKL 1451
              L  +  R+T  MN+ L +    +E+ KAL  +   K+P GSD MPALFY++FW  +  
Sbjct: 364  ELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWECVGD 423

Query: 1452 DVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRL 1631
            D++  + + L   E P S N T +VLIPK  N E + +  PISLCNVV+KI +K +ANRL
Sbjct: 424  DIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRL 483

Query: 1632 KLVLPSLIHHTQSAFVPRRLITDN 1703
            K +L  +I   Q AFVP+R+ITDN
Sbjct: 484  KPLLSEIISPIQIAFVPQRMITDN 507



 Score =  115 bits (288), Expect(3) = 9e-70
 Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
 Frame = +3

Query: 180 VLDCDLNSGSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDW-QFSGIYGWPVEGE 356
           V DC      + GGL + WK   + +L + S   +   +  +D  W +F+G+YG P   +
Sbjct: 6   VKDCQ----GKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDK 61

Query: 357 KYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDL 536
           K LTW+ +RTL       WLCVGDFNE+L+++EK  G  K  + M  F + +    L++L
Sbjct: 62  KDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNL 121

Query: 537 GFDGFIYTWTNGQ-NGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
           GF G  +TW N     DG I+ERLDR + + +W   FP+++V   +   SDH PV++
Sbjct: 122 GFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIV 178



 Score = 58.2 bits (139), Expect(3) = 9e-70
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
 Frame = +1

Query: 742  DGGRKK--FRFESMWLQDESCQKMVRQG*DGWVISMGLIGLK--QKIDNCGVELLKWERS 909
            +GGR K  FRFE+ W ++E C  +V    + W +S+G  G K    I      L  W ++
Sbjct: 187  NGGRSKPGFRFEAGWAREEHCAPIVE---NAWKLSVGPRGGKVMDAIREVAANLWDWSKN 243

Query: 910  HFGNIGIQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWI 1089
              G++  ++KK+++ L +  + S + +                  ++E  W QRA  +W+
Sbjct: 244  FLGDLEKRIKKAKQAL-EAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQRANQHWL 302

Query: 1090 KDGDKNTALF 1119
            + GD+NT  F
Sbjct: 303  EKGDRNTKFF 312



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 38/88 (43%), Positives = 50/88 (56%)
 Frame = +2

Query: 1655 SPYAVCFCPSSSYH**RLLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVM 1834
            SP  + F P        LLA+E+ H +K  +    G  A K  M KAYDRVE  FL  +M
Sbjct: 492  SPIQIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMM 551

Query: 1835 LPLGINESFVNLVMKCVSSVFFSTLVNG 1918
            L LG + ++V +VMKCV+SV +   VNG
Sbjct: 552  LKLGFDRNWVFIVMKCVTSVTYRIKVNG 579


>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
          Length = 1651

 Score =  142 bits (358), Expect(3) = 1e-67
 Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 2/205 (0%)
 Frame = +3

Query: 1095 RGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLE-- 1268
            +G +    FH  A+ R+            G       G+     +YF  IFS+    E  
Sbjct: 694  KGDRNTAYFHACASARRDLNRISVIIDSEGQQHTSTGGIHSAIIDYFSGIFSSTRPTEEM 753

Query: 1269 MEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIK 1448
            +     AI+  +TD M   L  PF  +E+  AL  M P  +PG D  P +F+Q+FW +++
Sbjct: 754  LASTTQAISAGLTDSMKARLRAPFTKEEIWPALKNMKPLSAPGPDGFPPVFFQRFWPIVQ 813

Query: 1449 LDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANR 1628
              V + +L +LN  E   ++NHT IVLIPK     LV++F PISLCNVV+KI +K +ANR
Sbjct: 814  QQVSEAVLRLLNRRELEGNLNHTNIVLIPKVPQPRLVSHFRPISLCNVVYKIASKMVANR 873

Query: 1629 LKLVLPSLIHHTQSAFVPRRLITDN 1703
            LK +L +LI   QSAF+P R I+DN
Sbjct: 874  LKSILGALITEEQSAFLPGRAISDN 898



 Score =  102 bits (255), Expect(3) = 1e-67
 Identities = 44/130 (33%), Positives = 74/130 (56%)
 Frame = +3

Query: 318 QFSGIYGWPVEGEKYLTWELMRTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLE 497
           + +G YG P+   +  +W+L+R L ++ +  WLC+GDFNE+L+  E +    +   +M  
Sbjct: 441 RLTGFYGNPLCSARPESWDLLRRLHHHSSRPWLCIGDFNEVLFPHEYSSRVSRSPTQMAN 500

Query: 498 FHEVIQDARLNDLGFDGFIYTWTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRV 677
           F   + D  L DL F G I+TW+N +     +  RLDR   + +W+ ++P+   YHL   
Sbjct: 501 FRSALMDCGLQDLPFQGHIFTWSNKRRNPQTVYARLDRGTASGQWLRLYPSTTTYHLPFG 560

Query: 678 ASDHCPVLIQ 707
            SDH P+L++
Sbjct: 561 GSDHAPILVR 570



 Score = 62.0 bits (149), Expect(3) = 1e-67
 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = +1

Query: 754  KKFRFESMWLQDESCQKMVRQG*DGWVISMGLIG-LKQKIDNCGVELLKWERSHFGNIGI 930
            ++FRFE+ W+    C+  +R   D W  S G    L+ ++ +  + LLKW +   G +  
Sbjct: 584  RRFRFEARWMSIPGCETTIR---DAWTSSRGPPSTLQPRLSHTRISLLKWHQHQIGPLKA 640

Query: 931  QLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKNT 1110
            Q+K+ E +L  +   + +  + +              +++E  W QR++ +W+  GD+NT
Sbjct: 641  QIKRVETELAAIAT-ATLTDISIAQETQLRSELDGLLMQEEMFWKQRSKVHWMAKGDRNT 699

Query: 1111 ALF 1119
            A F
Sbjct: 700  AYF 702


>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1913

 Score =  216 bits (550), Expect(2) = 4e-66
 Identities = 160/564 (28%), Positives = 258/564 (45%), Gaps = 4/564 (0%)
 Frame = +3

Query: 27   NCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNSG 206
            N     +   V+ L  L+ + + + VFL ET+    ++  +      +G   + C  NS 
Sbjct: 608  NSEATSHGAAVRDLIALVKEANSQVVFLSETRQKIERIRRLRSRLGLKGF--VGC--NSD 663

Query: 207  SRRGGL*LMW-KSMF-DFKLWSDSLHHLGRMINNEDKDWQFSGIYGWPVEGEKYLTWELM 380
               GGL L W +S+F D K  ++        ++ ED     + +YG P    ++  W  +
Sbjct: 664  GLSGGLALFWHESIFMDVKSVNERYVDAYMRLSPEDPLCHVTFVYGEPRVENRHRLWSRL 723

Query: 381  RTLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIYT 560
              L  +    W+ +GDFNE L+ FE     ++   +M  F +V+Q   L DLGF G  YT
Sbjct: 724  LDLKQSSPLPWMIIGDFNETLWQFEHFSVSKRGEAQMRAFRDVLQICELVDLGFSGVPYT 783

Query: 561  WTNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLIQWDRIWSEQGPH 740
            + N + G  N++ RLDR L +  W DI+ N QV HL    SDHCP+L+++     +    
Sbjct: 784  YDNRREGRSNVKVRLDRALADNSWRDIYSNSQVVHLTSSCSDHCPILLKFAADSRQSNRK 843

Query: 741  XXXXXXXXXXXDVASRRIVSKNGAT--RMRWMGDLYGINWLKAKN**LWG*AAQMGTIPF 914
                       + AS  ++S   A     R +GD   IN+   K          MG +  
Sbjct: 844  KCFHYEICWEREPASTEVISLAWAEVGEKRTLGD---INFTLGK---------VMGAL-- 889

Query: 915  WEYWHPIKEV*RKAL*TGSTLSHAHAYSEGEATIRRGTSRAPYQTRTNVASKGSNKLD*R 1094
             + W  +K                           +  SRA  + R ++A+  S+  D  
Sbjct: 890  -QGWSKVKF--------------------------KNVSRAIEKARKDLATLVSHNADYS 922

Query: 1095 RGQKYGFIFHKIANGRKTXXXXXXXXXXXGAWVEGQ*GVTRVFEEYFKMIFSAETQLEME 1274
              ++   + +++   R+               V+    + ++  +YFK +F+A+  ++  
Sbjct: 923  EIRRSSDVLNELLY-REEMLWLQRSRISWLKEVKSTHEMEKIETDYFKDMFTADPCIDQS 981

Query: 1275 GPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTKSPGSDSMPALFYQKFWSLIKLD 1454
                    +++ EMN  L + F   E+  AL Q+ P K+PG D  PA F+Q+ W  IK D
Sbjct: 982  RVSRLFQEKVSPEMNVDLCKDFTEQEIADALFQIGPIKAPGLDGFPARFFQRNWDAIKKD 1041

Query: 1455 VLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF*PISLCNVVFKIITKTIANRLK 1634
            V+  + +       P  +N T IVLIPK      + +F PISLCNV++KI++K + NRL+
Sbjct: 1042 VVSAVKSFFETSIMPEGVNDTAIVLIPKVDQPMELKDFRPISLCNVIYKIVSKCLVNRLR 1101

Query: 1635 LVLPSLIHHTQSAFVPRRLITDNA 1706
             +L  L+   QSAFVP R+ITDNA
Sbjct: 1102 PILDELVSQNQSAFVPGRMITDNA 1125



 Score = 64.7 bits (156), Expect(2) = 4e-66
 Identities = 32/71 (45%), Positives = 44/71 (61%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            LLAFE FH ++ NK   + + A+KLD+ KAYDRV+  FL   M  LG    ++  +M C+
Sbjct: 1126 LLAFECFHFIQRNKNANKAACAYKLDLSKAYDRVDWVFLEQTMCKLGFAPRWIKWIMTCL 1185

Query: 1886 SSVFFSTLVNG 1918
            SSV +S   NG
Sbjct: 1186 SSVRYSIKFNG 1196


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  115 bits (289), Expect(4) = 8e-66
 Identities = 69/227 (30%), Positives = 112/227 (49%)
 Frame = +3

Query: 24   WNCRGLGNPRTVQVLKCLINDKDPKFVFLMETKLVTAKMENILKDTDFEGMHVLDCDLNS 203
            WNC+GLG P TV+ L+ +        +FL+ETK       ++     FE M    C ++ 
Sbjct: 368  WNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDM----CIISP 423

Query: 204  GSRRGGL*LMWKSMFDFKLWSDSLHHLGRMINNEDKDWQFSGIYGWPVEGEKYLTWELMR 383
                GGL + WK     ++ S  +  +   +  ++ ++  S IYG P+  E++  WE ++
Sbjct: 424  RGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFYLSCIYGHPIPSERHHLWEKLQ 483

Query: 384  TLANNMNSQWLCVGDFNEILYTFEKTGGRQKDANKMLEFHEVIQDARLNDLGFDGFIYTW 563
             ++ + +  W+  GDFNEIL   EK GGR++    +  F  +I    + DL   G  Y+W
Sbjct: 484  RVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSW 543

Query: 564  TNGQNGDGNIQERLDRCLGN*EWVDIFPNYQVYHLNRVASDHCPVLI 704
              G+  +  I+  LDR   N +W   FP ++   L    SDH PV+I
Sbjct: 544  V-GKRQNETIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVII 589



 Score = 92.4 bits (228), Expect(4) = 8e-66
 Identities = 55/165 (33%), Positives = 87/165 (52%)
 Frame = +3

Query: 1209 VTRVFEEYFKMIFSAETQLEMEGPLGAINLRMTDEMNEVLSRPFQVDEVVKALSQMHPTK 1388
            + +V E YF  +F+     + E  +  I  ++T++MN  L +     EV  A+  +   +
Sbjct: 747  IGKVAENYFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADR 806

Query: 1389 SPGSDSMPALFYQKFWSLIKLDVLDVILNILNDHESPWSINHTFIVLIPKKKNAELVTNF 1568
            +PG D   A FY   W LI  DV  ++ +          IN T I LIPK  + + ++++
Sbjct: 807  APGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDY 866

Query: 1569 *PISLCNVVFKIITKTIANRLKLVLPSLIHHTQSAFVPRRLITDN 1703
             PISLC   +KII+K +  RLK  L  +I  +Q+AFVP + I+DN
Sbjct: 867  RPISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDN 911



 Score = 65.1 bits (157), Expect(4) = 8e-66
 Identities = 33/79 (41%), Positives = 47/79 (59%)
 Frame = +2

Query: 1706 LLAFEIFHCMKNNKARKRGSFAFKLDMLKAYDRVECPFLRGVMLPLGINESFVNLVMKCV 1885
            L+A E+ H +K+ +  + G  A K D+ KAYDRVE  FL  VM+ LG    +V  +M CV
Sbjct: 913  LVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCV 972

Query: 1886 SSVFFSTLVNGPTWC*FFP 1942
            +SV +  L+NG  +   FP
Sbjct: 973  TSVSYEVLINGSPYGKIFP 991



 Score = 48.5 bits (114), Expect(4) = 8e-66
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
 Frame = +1

Query: 751  RKKFRFESMWLQDESCQKMVRQG*D-GWVISMGLIGLKQKIDNCGVELLKWERSHFGNIG 927
            R +FR++    Q E     V++G + G   S G  G  +K+  C  EL KW+R    N  
Sbjct: 599  RGQFRYDRRHFQFEDFVDSVQRGWNRGRSDSHG--GYYEKLHCCRQELAKWKRRTKTNTA 656

Query: 928  IQLKKSEEKLYKLDQHSAMHTLIVXXXXXXXXXXXXXHIKQEQMWHQRARTNWIKDGDKN 1107
               +K E   Y++D     HTL               +  +E  WH ++R  W+  GD+N
Sbjct: 657  ---EKIETLKYRVDAAERDHTLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLLGDRN 713

Query: 1108 TALFF--TKLLMEGRRV 1152
            T  F+  TKL     R+
Sbjct: 714  TMFFYASTKLRKSRNRI 730


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