BLASTX nr result
ID: Rehmannia22_contig00018331
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00018331
(624 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga... 64 5e-08
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 62 1e-07
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 60 5e-07
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 59 9e-07
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 59 1e-06
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 1e-06
emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera] 58 2e-06
emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera] 58 2e-06
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr... 57 4e-06
emb|CAN82584.1| hypothetical protein VITISV_031018 [Vitis vinifera] 57 4e-06
emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera] 57 4e-06
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 56 7e-06
ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249... 56 7e-06
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 7e-06
emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera] 56 7e-06
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 9e-06
emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 9e-06
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ... 56 9e-06
emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera] 56 9e-06
>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 63.5 bits (153), Expect = 5e-08
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = -3
Query: 622 LSRKGIVL--DTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFK 461
LSR GI+ DTMC C E++ H+ + C A+ +W K+ ++W + S+ + +F+
Sbjct: 1077 LSRLGIIPPEDTMCPLCSSWAEDVAHLFLFCPYAREIWGWWLKIWNLNWVWPSSLVLAFE 1136
Query: 460 QWWLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDT 317
QW + K+ W Q+ ++W LW+ RN IF NK +T
Sbjct: 1137 QWSFPSANKLFKKVWAASFQI---IVWSLWKERNARIFNNKASPAMET 1181
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 62.4 bits (150), Expect = 1e-07
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPIS-WEFDSNTLFSFKQWWLF 446
L R+ ++ D CQ CG+A E++ H+L C +K +W+ A I DS SF Q
Sbjct: 528 LKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLES 587
Query: 445 ISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGAISEWIEYSNVFNS 266
I ++ + ++ + L ++ W +W+ RN IF NK S D+I A+ + ++ N
Sbjct: 588 IQKLNQSA--RKDVSLFPFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKESLNC 645
Query: 265 N 263
N
Sbjct: 646 N 646
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 60.1 bits (144), Expect = 5e-07
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPI---SWEFDSNTLFSFKQWW 452
L + I + +C CG E++ H+L C ++ +W L+PI + F N+LF +
Sbjct: 953 LFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFY--NFD 1010
Query: 451 LFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGAISE 296
+SR ++ + ++ +++ ++LW++W++RN IFEN S + +D AI E
Sbjct: 1011 FLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQE 1062
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 59.3 bits (142), Expect = 9e-07
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPIS---WEFDSNTLFSFKQWW 452
L ++GIV + C+ CG+ VEN+ H+LV C+ AK VW+ +P++ + DS+ LF
Sbjct: 47 LCKRGIVQEAHCKRCGNKVENILHVLVTCKAAKKVWQRSPVADAVHKIDSSNLFG----- 101
Query: 451 LFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFE 344
++++Q + + +L +LW +W RN +FE
Sbjct: 102 -ELTKLQ-RSLSNDDFELLLVLLWIIWYARNKFVFE 135
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 58.5 bits (140), Expect = 1e-06
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPISWEFD--SNTLFSFKQWWL 449
L R+G+ L + C+FCG++ E+L+HI +HC A VW +E NT+ L
Sbjct: 558 LQRRGVALVSRCEFCGNSTESLDHIFLHCSFAASVWNHFIYIFEIGLVPNTIAEVFSLGL 617
Query: 448 FISR-VQKKEYWKERIQLSSYVLWWLWRTRNLCIFENK 338
+ R Q KE W + + +LW++W RN F+++
Sbjct: 618 AMDRSPQLKELW---LICFTSILWYIWHARNQIRFDSR 652
>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 58.5 bits (140), Expect = 1e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Frame = -3
Query: 598 DTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFKQWWLFISRVQ 431
+ +C C + E +H+L+HC A+ +W + + W F S+ L +F QW ++
Sbjct: 1088 EDICPLCDEGSETSDHLLLHCVEAQKLWAWWLDIWKVKWVFPSSLLDAFSQW----KCIK 1143
Query: 430 KKEYWKERIQLSSY--VLWWLWRTRNLCIFEN 341
KK + +++ +S+ ++W +W+ RNL IF N
Sbjct: 1144 KKSNFFKKVWAASFFVIIWTIWKERNLRIFHN 1175
>emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera]
Length = 2077
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFKQW 455
L R+G +L C C E + HILVHC + KI+W L ++W + + W
Sbjct: 1942 LKRRGWILANRCCLCCVEEETINHILVHCSKTKILWDLLLSLFGVNWVMPFSVRDTLLSW 2001
Query: 454 WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGAISEWIEYSN 278
++ ++ W+ + W +W+ RN +F+N ST+ + + + ++N
Sbjct: 2002 YVSFKDKNHRKVWR---AAPLCLFWTIWKERNRIVFDNGALSTQRLKNSLVCNLLSWAN 2057
>emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]
Length = 1383
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWK----LAPISWEFDSNTLFSFKQW 455
L R+G L C CG E + HIL+HC AK +W L + W F ++ W
Sbjct: 905 LQRRGWHLPNRCFLCGCEEETINHILIHCTMAKGLWNIILALCGVQWVFPNSVKEVLSSW 964
Query: 454 -WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFE 344
F+ R ++KE WK + ++ W +W+ RN F+
Sbjct: 965 KGSFVGR-KRKEVWK---SIPLFIFWTIWKERNRLXFK 998
>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
gi|557106756|gb|ESQ47071.1| hypothetical protein
EUTSA_v10028075mg [Eutrema salsugineum]
Length = 343
Score = 57.0 bits (136), Expect = 4e-06
Identities = 34/109 (31%), Positives = 52/109 (47%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPISWEFDSNTLFSFKQWWLFI 443
L R+GI +D C+ CG+ E + H+L C+ A+ VW LAP+ + NT+ +
Sbjct: 91 LVRRGIQVDFACKICGNP-ETITHVLRDCQLARKVWNLAPLRTQSHLNTVLCLDFLAHIL 149
Query: 442 SRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGAISE 296
S V L +++ W LW RN IF + S + I AI +
Sbjct: 150 SMVSLPPIEVSTTSLPAWICWNLWTPRNHRIFSDTTYSAYEIITKAICD 198
>emb|CAN82584.1| hypothetical protein VITISV_031018 [Vitis vinifera]
Length = 555
Score = 57.0 bits (136), Expect = 4e-06
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLA----PISWEFDSNTLFSFKQW 455
L R+G +L C C E+ HILVHC + KI+W L ++W + + W
Sbjct: 420 LKRRGWILANRCCLCCVDEESTNHILVHCSKTKILWDLVFSLFGVNWVLPFSVKDTLLSW 479
Query: 454 WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGAISEWIEYSN 278
+ ++ W+ + W +W+ RN +F+NK ST+ + + ++N
Sbjct: 480 HVSFKDKNHRKVWR---AAPLCLFWTVWKERNRIVFDNKALSTQRLKSSFVCNLLSWAN 535
>emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]
Length = 563
Score = 57.0 bits (136), Expect = 4e-06
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWK----LAPISWEFDSNTLFSFKQW 455
L R+G L C CG E + HIL+HC AK +W L + W F ++ W
Sbjct: 428 LQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWNIILALCGVQWVFPNSVKEVLSSW 487
Query: 454 -WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFE 344
F+ R ++KE WK + ++ W +W+ RN F+
Sbjct: 488 KGSFVGR-KRKEVWK---SIPLFIFWTIWKERNRLAFK 521
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 56.2 bits (134), Expect = 7e-06
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Frame = -3
Query: 616 RKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPI---SWEFDSNTLFSFKQWWLF 446
R+G+ +D CQ CG+ E++ H+L C A+ VW L+ + + F ++++F+ Q+ L
Sbjct: 1077 RRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYLL- 1135
Query: 445 ISRVQKKEYWKERIQLS-SYVLWWLWRTRNLCIFENKWPSTKDTID---GAISEW 293
++ K E+I+ S +VLW LW+ R+ FE S +I+ + EW
Sbjct: 1136 --ELKGKGLIPEQIKKSWPWVLWRLWKNRDKLFFEGTIFSPLKSIEKIRDDVQEW 1188
>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
Length = 2143
Score = 56.2 bits (134), Expect = 7e-06
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLA----PISWEFDSNTLFSFKQW 455
L ++G L C C + E+++HIL+ C +A+++W+L +SW + + W
Sbjct: 1825 LKKRGRCLANRCFLCCEEEESIDHILIQCSKARVLWELLFALFGVSWVLPYSVRDTLSGW 1884
Query: 454 WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGA 305
F ++++ WK S + W +W+ RN F+N+ S I A
Sbjct: 1885 SGFNMGKKRRKVWK---AAPSCIFWAVWKERNRIAFDNEELSMNSIIQKA 1931
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 56.2 bits (134), Expect = 7e-06
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = -3
Query: 598 DTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFKQWWLFISRVQ 431
D +C C A E +H+L+HC A +W + +SW F N +F+QW+
Sbjct: 1089 DAVCIMCNGAPETSDHLLLHCPFASSIWLWWLGIWNVSWVFPKNLFEAFEQWYCHKKNPF 1148
Query: 430 KKEYWKERIQLSSYVLWWLWRTRNLCIF 347
++ W + S ++W +W+ RN IF
Sbjct: 1149 FRKVW---CSIFSIIIWTIWKERNARIF 1173
>emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]
Length = 613
Score = 56.2 bits (134), Expect = 7e-06
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWK----LAPISWEFDSNTLFSFKQW 455
L R+G L C CG E + HIL+HC AK +W L + W F ++ W
Sbjct: 478 LQRRGWHLPNRCFLCGCEEETINHILIHCTMAKGLWNIILVLCGVQWVFPNSVKEVLSSW 537
Query: 454 -WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFE 344
F+ R ++K+ WK + ++ W +W+ RN F+
Sbjct: 538 KGSFVGR-KRKKVWK---SIPLFIFWTIWKERNKLAFK 571
>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 55.8 bits (133), Expect = 9e-06
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = -3
Query: 622 LSRKGIVL--DTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFK 461
L R GI+ D +C FC +E H+L+HCE + +W + SW F + +F
Sbjct: 1077 LGRIGIIPIEDAVCVFCNIGLETTNHLLLHCEFSWKLWTWWLNIWGYSWAFPKSIKNAFA 1136
Query: 460 QWWLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTID 311
QW ++ K+ W + ++W LW+ RN IF N S ++ D
Sbjct: 1137 QWQIYGRGAFFKKIWH---AIFFIIIWSLWKERNSRIFNNSNSSLEEIQD 1183
>emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 55.8 bits (133), Expect = 9e-06
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Frame = -3
Query: 622 LSRKGIVL--DTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFK 461
L++ GI+ D +C C ++ E +H+L+HC A+ +W L I W F +F
Sbjct: 1077 LAKIGIIPKDDDICILCSNSSETSDHLLLHCNFARSLWHWWFSLWNIQWVFPHTLREAFD 1136
Query: 460 QWWLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTID 311
QW V K+ W + + ++W +W+ RN IFE S KD D
Sbjct: 1137 QWQTRSRCVFFKKAW---LTIFFIIVWSVWKERNSRIFEKSESSVKDIQD 1183
>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1555
Score = 55.8 bits (133), Expect = 9e-06
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVWKLAPISWEFDSNTLFSFKQWWLFI 443
L + I +D C+ CG E++ H+L HC+ A+ VW LAP++ D + W +
Sbjct: 1278 LLERHIDIDPRCKRCGSN-ESITHLLFHCQFAQRVWHLAPLATAPDFRGMIDLMADWPAL 1336
Query: 442 SRVQK-KEYWKERIQLSSYVLWWLWRTRNLCIFENKWPSTKDTIDGAI---SEW 293
S ++ L ++ W +W+ RN +FE S +DT+ AI EW
Sbjct: 1337 SNLKALPPTGIASGNLVPWIFWNIWKARNRFVFEGVSASPEDTLSSAIRLAREW 1390
>emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
Length = 1936
Score = 55.8 bits (133), Expect = 9e-06
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = -3
Query: 622 LSRKGIVLDTMCQFCGDAVENLEHILVHCERAKIVW----KLAPISWEFDSNTLFSFKQW 455
L R+G L C CG E + HIL+HC AK +W L + W F ++ W
Sbjct: 1765 LQRRGXHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVFPNSVKEVLSSW 1824
Query: 454 -WLFISRVQKKEYWKERIQLSSYVLWWLWRTRNLCIFE 344
F+ R ++K+ WK + ++ W +W+ RN F+
Sbjct: 1825 KGSFVGR-KRKKVWK---SIPLFIFWTIWKERNRLAFK 1858