BLASTX nr result
ID: Rehmannia22_contig00018263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00018263
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 236 2e-60
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 236 2e-60
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 233 2e-59
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 233 2e-59
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 232 3e-59
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 232 3e-59
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 230 2e-58
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 229 4e-58
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 227 1e-57
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 207 1e-51
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 207 1e-51
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 207 1e-51
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 207 1e-51
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom... 203 2e-50
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 202 5e-50
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 202 5e-50
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 201 6e-50
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 201 1e-49
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 201 1e-49
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 199 2e-49
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 236 bits (603), Expect = 2e-60
Identities = 117/163 (71%), Positives = 130/163 (79%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPYIKSLFLGWFEPLRD IAAEQDLCK+GKNR AYAPY D LPADMMAVIT
Sbjct: 1 MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTG NGSARVVQAACHIGEAIEHEVRI +F+E K+K+A + + G +P
Sbjct: 61 MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 120
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KEQE+ L QV++IV++QDD KPWGQDA VK
Sbjct: 121 TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVK 163
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 236 bits (603), Expect = 2e-60
Identities = 117/163 (71%), Positives = 130/163 (79%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPYIKSLFLGWFEPLRD IAAEQDLCK+GKNR AYAPY D LPADMMAVIT
Sbjct: 169 MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 228
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTG NGSARVVQAACHIGEAIEHEVRI +F+E K+K+A + + G +P
Sbjct: 229 MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 288
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KEQE+ L QV++IV++QDD KPWGQDA VK
Sbjct: 289 TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVK 331
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 233 bits (594), Expect = 2e-59
Identities = 118/163 (72%), Positives = 128/163 (78%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMAVIT
Sbjct: 195 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVIT 254
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG GSARVVQAA HIGEAIEHE RIH+FLE K+ NAL+ E+ P
Sbjct: 255 MHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDI 314
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 315 MKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 357
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1;
Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 233 bits (594), Expect = 2e-59
Identities = 118/163 (72%), Positives = 128/163 (78%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMAVIT
Sbjct: 195 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVIT 254
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG GSARVVQAA HIGEAIEHE RIH+FLE K+ NAL+ E+ P
Sbjct: 255 MHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDI 314
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 315 MKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 357
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B;
Flags: Precursor
Length = 1002
Score = 232 bits (592), Expect = 3e-59
Identities = 118/163 (72%), Positives = 128/163 (78%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMAVIT
Sbjct: 195 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVIT 254
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG GSARVVQAA +IGEAIEHE RIH+FLE K+ NAL+ EE P
Sbjct: 255 MHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDM 314
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 315 MKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVK 357
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 232 bits (592), Expect = 3e-59
Identities = 118/163 (72%), Positives = 128/163 (78%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMAVIT
Sbjct: 195 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVIT 254
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG GSARVVQAA +IGEAIEHE RIH+FLE K+ NAL+ EE P
Sbjct: 255 MHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDM 314
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 315 MKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVK 357
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 230 bits (586), Expect = 2e-58
Identities = 120/163 (73%), Positives = 129/163 (79%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQ LC EGKNRGAYAP+ DQLPA+MMAVIT
Sbjct: 187 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVIT 246
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG +GSARVVQAA HIGEAIEHE RIH+FLE K KNAL+ + EE
Sbjct: 247 MHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-KNALDGSLEETAGDI 305
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 306 MKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 348
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum lycopersicum]
Length = 993
Score = 229 bits (583), Expect = 4e-58
Identities = 119/163 (73%), Positives = 129/163 (79%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPYIKSLFLGWFEPL+DAIAAEQ LC EGKNRGAYAP+ DQLPA+MMAVIT
Sbjct: 187 MCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVIT 246
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG +GSARVVQAA HIGEAIEHE RIH+FLE K KNAL+ + EE
Sbjct: 247 MHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTK-KNALDGSLEETAGDI 305
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 306 MKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 348
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 227 bits (579), Expect = 1e-57
Identities = 116/163 (71%), Positives = 126/163 (77%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQ LC EGKNRGA AP+ DQLPA+MMAVIT
Sbjct: 195 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGACAPFFDQLPAEMMAVIT 254
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMG LMTGG GSARVVQAA HIGEAIEHE RIH+FLE K+ NAL+ E+ P
Sbjct: 255 MHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDI 314
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+ER L QV+KIV+QQDD KPWGQD VK
Sbjct: 315 MKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 357
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 207 bits (527), Expect = 1e-51
Identities = 109/166 (65%), Positives = 124/166 (74%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMAVIT
Sbjct: 214 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVIT 273
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEGPDP 133
MHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG +
Sbjct: 274 MHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDES 333
Query: 132 E--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
EQE+ L V++IV+ QDD KPWGQDA+ K
Sbjct: 334 NTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAK 379
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 207 bits (527), Expect = 1e-51
Identities = 109/166 (65%), Positives = 124/166 (74%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMAVIT
Sbjct: 218 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVIT 277
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEGPDP 133
MHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG +
Sbjct: 278 MHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDES 337
Query: 132 E--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
EQE+ L V++IV+ QDD KPWGQDA+ K
Sbjct: 338 NTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAK 383
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 207 bits (527), Expect = 1e-51
Identities = 109/166 (65%), Positives = 124/166 (74%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMAVIT
Sbjct: 218 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVIT 277
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEGPDP 133
MHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG +
Sbjct: 278 MHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDES 337
Query: 132 E--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
EQE+ L V++IV+ QDD KPWGQDA+ K
Sbjct: 338 NTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAK 383
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 207 bits (527), Expect = 1e-51
Identities = 109/166 (65%), Positives = 124/166 (74%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAIA EQ+ C+ K++ AYAPY DQLPADMMAVIT
Sbjct: 218 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVIT 277
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKN-ALNRTCEEGPDP 133
MHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+KN N+ EEG +
Sbjct: 278 MHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDES 337
Query: 132 E--AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
EQE+ L V++IV+ QDD KPWGQDA+ K
Sbjct: 338 NTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAK 383
>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1100
Score = 203 bits (517), Expect = 2e-50
Identities = 107/165 (64%), Positives = 121/165 (73%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCE KLAPNLPYIKSLFLGWFEPLRDAI EQ+L + GK R YA Y+DQLPADM AVIT
Sbjct: 221 MCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVIT 280
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEG--PD 136
MHKLMGLLMTGG +G ARVVQAAC IG+AIE EVRIHKFLE K+K + +EG P+
Sbjct: 281 MHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDEGDKPN 340
Query: 135 PEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
E KEQE+ L V++IV+ QDD KPWGQDA+ K
Sbjct: 341 AEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAK 385
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 202 bits (513), Expect = 5e-50
Identities = 102/165 (61%), Positives = 118/165 (71%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCE KLAPNLPY+KSLFLGWFEPLRD I AEQ+L E R ++APY + LPADMMAVIT
Sbjct: 181 MCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAPYFNMLPADMMAVIT 240
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNA--LNRTCEEGPD 136
MHKLMGLLMTG +GS RV+QAAC IGEAIEHEVRIHKFLE K+KN ++ E G
Sbjct: 241 MHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKNTKEVDNVVEAGDS 300
Query: 135 PEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
AKEQ+R + QV+ IV++QD +PWGQDA K
Sbjct: 301 DIAKEQQRLRKKVTDLMKKQKIRQVRNIVKKQDSTRPWGQDAHAK 345
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 202 bits (513), Expect = 5e-50
Identities = 104/165 (63%), Positives = 119/165 (72%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRDAI EQ+LC+ GKN+ AYAPY DQLPADMM+VIT
Sbjct: 223 MCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVIT 282
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGP--D 136
MHKL+GLLMTGG +GS RVVQAAC IG+AIE EVRIH FLE KRK EG D
Sbjct: 283 MHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFD 342
Query: 135 PEAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
P EQE+ LH ++IV+ D+ KPWG +A+ K
Sbjct: 343 PVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAK 387
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and
chloroplast RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 201 bits (512), Expect = 6e-50
Identities = 103/163 (63%), Positives = 121/163 (74%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA Y+ QLPADMMAVIT
Sbjct: 212 MCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVIT 271
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG +G+ARVVQAA IG+AIE EVRIH FLE K++ A +E +
Sbjct: 272 MHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHV 331
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
+EQE+ L V +IVR+QDD KPWGQDA+ K
Sbjct: 332 TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAK 374
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 201 bits (510), Expect = 1e-49
Identities = 103/163 (63%), Positives = 120/163 (73%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA Y QLPADMMAVIT
Sbjct: 211 MCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVIT 270
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG +G+ARVVQAA IG+AIE EVRIH FLE K++ A +E +
Sbjct: 271 MHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHV 330
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
+EQE+ L V +IVR+QDD KPWGQDA+ K
Sbjct: 331 TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAK 373
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 201 bits (510), Expect = 1e-49
Identities = 103/163 (63%), Positives = 120/163 (73%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCEQKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA Y QLPADMMAVIT
Sbjct: 211 MCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVIT 270
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCEEGPDPE 130
MHKLMGLLMTGG +G+ARVVQAA IG+AIE EVRIH FLE K++ A +E +
Sbjct: 271 MHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHV 330
Query: 129 AKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
+EQE+ L V +IVR+QDD KPWGQDA+ K
Sbjct: 331 TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAK 373
>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
gi|548846502|gb|ERN05778.1| hypothetical protein
AMTR_s00006p00254180 [Amborella trichopoda]
Length = 1006
Score = 199 bits (507), Expect = 2e-49
Identities = 103/164 (62%), Positives = 118/164 (71%), Gaps = 1/164 (0%)
Frame = -3
Query: 489 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYIDQLPADMMAVIT 310
MCE KLAPNLPY+KSLFLGWFEPLRD IA+EQ K GKN+GAYAPY QLPADMM+VIT
Sbjct: 196 MCEHKLAPNLPYMKSLFLGWFEPLRDIIASEQASYKAGKNKGAYAPYFMQLPADMMSVIT 255
Query: 309 MHKLMGLLMTGGCNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTCE-EGPDP 133
MHKLMGLLMTG NGS R+VQAAC IGEAIE EV+IH+F E K+K+ + + E P+
Sbjct: 256 MHKLMGLLMTGTDNGSTRLVQAACQIGEAIEQEVKIHRFFEKTKKKSDKEKKLDGEEPNE 315
Query: 132 EAKEQERXXXXXXXXXXXXXLHQVQKIVRQQDDVKPWGQDAQVK 1
KE+E LHQV+KIV+ QDD KPWG D K
Sbjct: 316 GDKEKESLRKRVTNLMKKQKLHQVRKIVKGQDDAKPWGIDIHAK 359