BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00018262
         (740 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   134   4e-29
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         134   4e-29
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   133   7e-29
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   132   9e-29
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   131   2e-28
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   131   2e-28
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   130   3e-28
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p...   129   8e-28
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   129   1e-27
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   127   4e-27
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr...   127   4e-27
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...   127   4e-27
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   119   1e-24
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ...   115   2e-23
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   115   2e-23
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...   111   3e-22
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...   110   4e-22
ref|XP_004172733.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   109   8e-22
ref|XP_004135424.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   109   8e-22
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   108   1e-21

>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
           AltName: Full=NictaRpoT1-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1B;
           Flags: Precursor
          Length = 1002

 Score =  134 bits (336), Expect = 4e-29
 Identities = 91/206 (44%), Positives = 119/206 (57%), Gaps = 28/206 (13%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPS-------FNAFYAVKSP-----------------QDS 313
           MWR +S+ +Y RK   F  SH S       +++ +    P                 Q+S
Sbjct: 1   MWRYISKHAYSRK---FRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNS 57

Query: 314 IFIE---KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNT-RTRGYAAV 481
           IF     K R LE   E       +   + S  S +K  F     R  G+  R R Y + 
Sbjct: 58  IFSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSA 117

Query: 482 AEALVSTSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQI 661
           AEA+VSTS  EE++DE+QELI+E++KE    ++++ + KQPK +GGMG+GKYN LRRRQI
Sbjct: 118 AEAIVSTS--EEDIDEIQELIEEMDKENEALKANL-QPKQPKTIGGMGVGKYNFLRRRQI 174

Query: 662 KMETEAWEEAAKEYQELLMDMCEQKL 739
           K+ETEAWEEAAKEYQELLMDMCEQKL
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKL 200


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  134 bits (336), Expect = 4e-29
 Identities = 91/206 (44%), Positives = 119/206 (57%), Gaps = 28/206 (13%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPS-------FNAFYAVKSP-----------------QDS 313
           MWR +S+ +Y RK   F  SH S       +++ +    P                 Q+S
Sbjct: 1   MWRYISKHAYSRK---FRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNS 57

Query: 314 IFIE---KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNT-RTRGYAAV 481
           IF     K R LE   E       +   + S  S +K  F     R  G+  R R Y + 
Sbjct: 58  IFSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSA 117

Query: 482 AEALVSTSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQI 661
           AEA+VSTS  EE++DE+QELI+E++KE    ++++ + KQPK +GGMG+GKYN LRRRQI
Sbjct: 118 AEAIVSTS--EEDIDEIQELIEEMDKENEALKANL-QPKQPKTIGGMGVGKYNFLRRRQI 174

Query: 662 KMETEAWEEAAKEYQELLMDMCEQKL 739
           K+ETEAWEEAAKEYQELLMDMCEQKL
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKL 200


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum tuberosum]
          Length = 993

 Score =  133 bits (334), Expect = 7e-29
 Identities = 89/200 (44%), Positives = 119/200 (59%), Gaps = 22/200 (11%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLK------------IFSESHPSFNAFYAV-KSP-----QDSIFIE-- 325
           MWR +S+Q+Y RKL+             F ++ P       + ++P     Q SIF    
Sbjct: 1   MWRYISKQAYSRKLRNTHDSDFLGFAQSFGKTRPLQGLCEEIYRNPNLGVSQSSIFTRVN 60

Query: 326 -KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNTRT-RGYAAVAEALVS 499
            K+R L+   E       + +   S  S +K       FR  G+    R Y + AEA+ S
Sbjct: 61  GKSRCLDGMCEDSCRNHYLGFSESSIFSRVK-----GDFRVCGSLGILRSYGSAAEAIAS 115

Query: 500 TSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEA 679
           TS  EE++DE+QELI+E+NKE    ++++ + KQPK VGGMG+GKYN LRRRQIK+ETEA
Sbjct: 116 TS--EEDIDEIQELIEEMNKENEALKTNL-QPKQPKTVGGMGIGKYNLLRRRQIKVETEA 172

Query: 680 WEEAAKEYQELLMDMCEQKL 739
           WE+AAKEYQELLMDMCEQKL
Sbjct: 173 WEDAAKEYQELLMDMCEQKL 192


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
           AltName: Full=NsRpoT-A; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1;
           Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1002

 Score =  132 bits (333), Expect = 9e-29
 Identities = 91/206 (44%), Positives = 118/206 (57%), Gaps = 28/206 (13%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPS-------FNAFYAVKSP-----------------QDS 313
           MWR +S+Q+Y RK   F  SH S       +++ +    P                 Q+S
Sbjct: 1   MWRYISKQAYSRK---FRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNS 57

Query: 314 IFIE---KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNTR-TRGYAAV 481
           IF     K R LE   E       +   + S  S +K  F     R  G+    R Y + 
Sbjct: 58  IFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSA 117

Query: 482 AEALVSTSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQI 661
           AEA+ STS  EE++DE+QELI+E+NKE    ++++ + KQPK +GGMG+GKYN LRRRQI
Sbjct: 118 AEAIASTS--EEDIDEIQELIEEMNKENEALKTNL-QPKQPKTIGGMGVGKYNLLRRRQI 174

Query: 662 KMETEAWEEAAKEYQELLMDMCEQKL 739
           K+ETEAWEEAAKEYQELLMDMCEQKL
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKL 200


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris]
          Length = 1002

 Score =  131 bits (330), Expect = 2e-28
 Identities = 91/206 (44%), Positives = 117/206 (56%), Gaps = 28/206 (13%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPS-------FNAFYAVKSP-----------------QDS 313
           MWR +S+Q+Y RK   F  SH S       +++ +    P                 Q+S
Sbjct: 1   MWRYISKQAYSRK---FRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNS 57

Query: 314 IFIE---KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNTR-TRGYAAV 481
           IF     K R LE   E       +   + S  S +K  F     R  G+    R Y + 
Sbjct: 58  IFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSA 117

Query: 482 AEALVSTSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQI 661
           AEA+ STS  EE+ DE+QELI+E+NKE    ++++ + KQPK +GGMG+GKYN LRRRQI
Sbjct: 118 AEAIASTS--EEDTDEIQELIEEMNKENEALKTNL-QPKQPKTIGGMGVGKYNLLRRRQI 174

Query: 662 KMETEAWEEAAKEYQELLMDMCEQKL 739
           K+ETEAWEEAAKEYQELLMDMCEQKL
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKL 200


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum lycopersicum]
          Length = 993

 Score =  131 bits (330), Expect = 2e-28
 Identities = 89/200 (44%), Positives = 116/200 (58%), Gaps = 22/200 (11%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESH-----PSFNAFYAVKS-------------PQDSIFIE-- 325
           MWR +S+Q Y RKL+   +S       SF     ++               Q SIF    
Sbjct: 1   MWRYISKQVYSRKLRNTHDSDFLGFAQSFRKTRPLQGLCEEGYRNPNLGVSQSSIFSRVN 60

Query: 326 -KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNTRT-RGYAAVAEALVS 499
            K+R L+   E       + +   S  S +K       FR  G+    R Y + AEA+ S
Sbjct: 61  GKSRCLDGMCEDSCRNHYLGFSESSIFSRVK-----GDFRVCGSLGVLRSYGSAAEAIAS 115

Query: 500 TSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEA 679
           TS  EE++DE+QELI+E+NKE    ++++ + KQPK VGGMG+GKYN LRRRQIK+ETEA
Sbjct: 116 TS--EEDIDEIQELIEEMNKENEALKTNL-QPKQPKTVGGMGIGKYNLLRRRQIKVETEA 172

Query: 680 WEEAAKEYQELLMDMCEQKL 739
           WE+AAKEYQELLMDMCEQKL
Sbjct: 173 WEDAAKEYQELLMDMCEQKL 192


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  130 bits (328), Expect = 3e-28
 Identities = 90/206 (43%), Positives = 117/206 (56%), Gaps = 28/206 (13%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPS-------FNAFYAVKSP-----------------QDS 313
           MWR +S+ +Y RK   F  SH S       +++ +    P                 Q+S
Sbjct: 1   MWRYISKHAYSRK---FRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNS 57

Query: 314 IFIE---KTRSLEPQNELFFSQDLISWRRQSEVSFLKYAFPNDTFRHFGNTR-TRGYAAV 481
           IF     K R LE   E       +   + S  S +K  F     R  G+    R Y + 
Sbjct: 58  IFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSA 117

Query: 482 AEALVSTSGSEEEVDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQI 661
           AEA+ STS  EE++DE+QELI+E+NKE    ++++ + KQPK +GGMG+GKYN LRRRQI
Sbjct: 118 AEAIASTS--EEDIDEIQELIEEMNKENEALKTNL-QPKQPKTIGGMGVGKYNLLRRRQI 174

Query: 662 KMETEAWEEAAKEYQELLMDMCEQKL 739
           K+ETEAWEEAAKEYQELLMDMCEQKL
Sbjct: 175 KVETEAWEEAAKEYQELLMDMCEQKL 200


>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
           [Chenopodium album]
          Length = 988

 Score =  129 bits (325), Expect = 8e-28
 Identities = 79/188 (42%), Positives = 104/188 (55%), Gaps = 10/188 (5%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNELFFSQDLISW 385
           MW+  S+   LRK++   E  PS N     +S QDS    K R    QN +     ++ +
Sbjct: 1   MWKKASKFEILRKIRNSGELKPSSNVSRWKESSQDSA---KIRQFLGQNSVNPRFPMLGF 57

Query: 386 RRQSEV----------SFLKYAFPNDTFRHFGNTRTRGYAAVAEALVSTSGSEEEVDEVQ 535
            R  E+          +F+ YA P   F  +  + +  YA  A A    + S EE DE++
Sbjct: 58  GRNGELLCRNSEMGGSNFMFYANPFGIFGFYAQSTSCSYATAAAAEEIVTASSEEDDEIR 117

Query: 536 ELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEYQELL 715
           EL+DEINK   VK   IR ++   MV GM  G+YN LR+RQIK+ETEAW EAA+EYQELL
Sbjct: 118 ELVDEINKLERVKPQSIRRKEPINMVAGMTAGRYNVLRKRQIKVETEAWNEAAREYQELL 177

Query: 716 MDMCEQKL 739
            DMCEQKL
Sbjct: 178 ADMCEQKL 185


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  129 bits (324), Expect = 1e-27
 Identities = 82/189 (43%), Positives = 112/189 (59%), Gaps = 11/189 (5%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNELFFSQDLISW 385
           MWRNL++ +Y R+L++ S+ H SF+            F +K R+LE Q+ +   + +   
Sbjct: 1   MWRNLAKHAYTRRLQLSSQ-HSSFSPSNCTSR---FYFPDKARALESQDHVNSLRPVAGL 56

Query: 386 RRQSEVSFLKYAFPNDTFRHFGNTRT-----------RGYAAVAEALVSTSGSEEEVDEV 532
           RR   +SF +       F   G T+T           +GYA+ AEA+ S       VDEV
Sbjct: 57  RRIGVLSFQQDELGRPGF---GVTKTPVNFFGLFGYQKGYASAAEAIASEEDMSG-VDEV 112

Query: 533 QELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEYQEL 712
           QEL++E+NK   +       +KQPK++GG+  GK+N LRRRQIKMETEAWEEAAKEY+EL
Sbjct: 113 QELVEEVNKGDKL-------EKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYREL 165

Query: 713 LMDMCEQKL 739
           L DMCEQKL
Sbjct: 166 LSDMCEQKL 174


>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Citrus sinensis]
          Length = 980

 Score =  127 bits (319), Expect = 4e-27
 Identities = 90/187 (48%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNELFFSQDLISW 385
           MWRNL+RQS  R  K FS S          K  Q + F++K  SLE Q  L  S  L+ +
Sbjct: 1   MWRNLARQSSTRNFK-FSPS----------KVSQTTNFLKKITSLETQTLLDSSCPLLGF 49

Query: 386 RRQSEVSFLKYAFPNDTFRH----FGNTRTRGYAAVAEALVSTS---GSEEEVDEVQELI 544
           RR S +S  K       F      FG   +R YA+ AEA+ S S   GSEE    VQELI
Sbjct: 50  RRTSFLSSQKSNLGQSNFTQSIYPFGVLTSRSYASAAEAIASESELSGSEE----VQELI 105

Query: 545 DEIN-KEINVKRSDIREQKQPKMVG-GMGLGKYNSLRRRQIKMETEAWEEAAKEYQELLM 718
           D+ N K +++  S     KQPK  G GMG  KY  L+RRQIK+ETEAWE+AAKEYQ+LL 
Sbjct: 106 DQFNEKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLA 165

Query: 719 DMCEQKL 739
           DMCEQKL
Sbjct: 166 DMCEQKL 172


>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
           gi|557540028|gb|ESR51072.1| hypothetical protein
           CICLE_v10030633mg [Citrus clementina]
          Length = 980

 Score =  127 bits (319), Expect = 4e-27
 Identities = 90/187 (48%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNELFFSQDLISW 385
           MWRNL+RQS  R  K FS S          K  Q + F++K  SLE Q  L  S  L+ +
Sbjct: 1   MWRNLARQSSTRNFK-FSPS----------KVSQTTNFLKKITSLETQTLLDSSCPLLGF 49

Query: 386 RRQSEVSFLKYAFPNDTFRH----FGNTRTRGYAAVAEALVSTS---GSEEEVDEVQELI 544
           RR S +S  K       F      FG   +R YA+ AEA+ S S   GSEE    VQELI
Sbjct: 50  RRTSFLSSQKSNLGQSNFTQSIYPFGVLTSRSYASAAEAIASESELSGSEE----VQELI 105

Query: 545 DEIN-KEINVKRSDIREQKQPKMVG-GMGLGKYNSLRRRQIKMETEAWEEAAKEYQELLM 718
           D+ N K +++  S     KQPK  G GMG  KY  L+RRQIK+ETEAWE+AAKEYQ+LL 
Sbjct: 106 DQFNEKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLA 165

Query: 719 DMCEQKL 739
           DMCEQKL
Sbjct: 166 DMCEQKL 172


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  127 bits (319), Expect = 4e-27
 Identities = 75/192 (39%), Positives = 118/192 (61%), Gaps = 14/192 (7%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNELFFSQDLISW 385
           MWRNL++Q   RK  + S+SH    +  ++   Q+S F++K R  E +  +     ++ +
Sbjct: 1   MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60

Query: 386 RRQSEVSFLK------------YAFPNDTFRHFGNTRTRGYAAVAEALVSTSGSEEEV-- 523
           R+  +++  K            Y +    F ++     +GYA+VAEA+ ST G E+    
Sbjct: 61  RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYA----KGYASVAEAIASTDGEEDSSGS 116

Query: 524 DEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEY 703
           +E+QE+++++ +E N+  S  ++ K  ++V GMG+GKYN LR+RQIK+ETEAW+EAAKEY
Sbjct: 117 EEIQEMLEDLIRENNMVESHFKQPK--RVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEY 174

Query: 704 QELLMDMCEQKL 739
           QELL DMCEQKL
Sbjct: 175 QELLADMCEQKL 186


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
           DNA-directed RNA polymerase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 997

 Score =  119 bits (297), Expect = 1e-24
 Identities = 84/194 (43%), Positives = 108/194 (55%), Gaps = 16/194 (8%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKI-FSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNELFFSQDLIS 382
           MWRN +R++ L   K+ FS      N        QD   ++K R  E Q  L      + 
Sbjct: 1   MWRNFARRTSLSSKKLNFSSDCTQLN--------QDLDILQKVRHPEAQTLLCSPYSFLG 52

Query: 383 WRRQSEVS-----FLKYAFPNDT----FRHFGNTRTRGYA-AVAEALVSTSGSE-EEVDE 529
            RR S +S     F+K +F N T    F HF     +GYA A A+ + ST  S+    DE
Sbjct: 53  SRRISGLSSQNHEFIKPSFTNLTNPFGFSHF---LFKGYATAAAQVIASTDESDFSGCDE 109

Query: 530 VQELIDEINKEINVKRSDIREQKQP----KMVGGMGLGKYNSLRRRQIKMETEAWEEAAK 697
           +QE I+EINK      +  R+Q+Q     K + GMG+GKY  L++RQIKMETEAWEEAA+
Sbjct: 110 LQEQIEEINKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKMETEAWEEAAR 169

Query: 698 EYQELLMDMCEQKL 739
           EYQELL DMCEQKL
Sbjct: 170 EYQELLTDMCEQKL 183


>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 932

 Score =  115 bits (288), Expect = 2e-23
 Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 10/188 (5%)
 Frame = +2

Query: 206 MWRNLSRQS-YLRKLKIFSESHP-SFNAFYAVKSPQDSIFIEKTRSLEPQNELF------ 361
           MWR+L +Q+ Y  K K  +E +  S ++  A    QDS+F  K R+ E +   F      
Sbjct: 1   MWRSLVKQAAYREKFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLFP 60

Query: 362 -FSQDLISWRRQSEVSFLKYAFPNDTFRHFGNT-RTRGYAAVAEALVSTSGSEEEVDEVQ 535
            F Q  +   ++ ++       P D  R  G     +GYA+ AEA++ST       +E+ 
Sbjct: 61  GFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVISTEEDMSGSEEIH 120

Query: 536 ELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEYQELL 715
           EL++ + +E   K S + + K  K+  GMG+ KYN+L++RQIK+ETEAWEEAAKEYQELL
Sbjct: 121 ELMEAMARE-EKKMSFLVQPK--KVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELL 177

Query: 716 MDMCEQKL 739
           MDMCE KL
Sbjct: 178 MDMCEHKL 185


>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
           gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
           isoform 1 [Theobroma cacao]
          Length = 996

 Score =  115 bits (288), Expect = 2e-23
 Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 10/188 (5%)
 Frame = +2

Query: 206 MWRNLSRQS-YLRKLKIFSESHP-SFNAFYAVKSPQDSIFIEKTRSLEPQNELF------ 361
           MWR+L +Q+ Y  K K  +E +  S ++  A    QDS+F  K R+ E +   F      
Sbjct: 1   MWRSLVKQAAYREKFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLFP 60

Query: 362 -FSQDLISWRRQSEVSFLKYAFPNDTFRHFGNT-RTRGYAAVAEALVSTSGSEEEVDEVQ 535
            F Q  +   ++ ++       P D  R  G     +GYA+ AEA++ST       +E+ 
Sbjct: 61  GFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVISTEEDMSGSEEIH 120

Query: 536 ELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEYQELL 715
           EL++ + +E   K S + + K  K+  GMG+ KYN+L++RQIK+ETEAWEEAAKEYQELL
Sbjct: 121 ELMEAMARE-EKKMSFLVQPK--KVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELL 177

Query: 716 MDMCEQKL 739
           MDMCE KL
Sbjct: 178 MDMCEHKL 185


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
           gi|550340797|gb|ERP62048.1| hypothetical protein
           POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score =  111 bits (277), Expect = 3e-22
 Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 14/192 (7%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYA-VKSPQDSIFIEKTRSLEPQNELFFSQDLIS 382
           MWRN+++Q+ L K +  S + PSF   ++ + +PQ+ IF EK++     N    S   + 
Sbjct: 38  MWRNVAKQAIL-KPQSKSLNFPSFPRTHSFLGAPQEPIFFEKSKFHSVNN----SSPQLC 92

Query: 383 WRRQSEVSFLKYAFPNDTFRHFGNTRT-----------RGYAAVAEALVSTSGSEEEV-- 523
           +RR  E+S  +      +F    N  +           RGY +VAEA+ ST   +  V  
Sbjct: 93  FRRIGEISTHEDYMGKPSFGFLRNGDSSNGNLCSGLCPRGYVSVAEAVSSTDVEDNVVVD 152

Query: 524 DEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEY 703
           +E+QEL+ +  KE   K  D R +++     GMG GKY +LRRRQ+K+E EAWE+AAKEY
Sbjct: 153 EELQELLQDTRKE-EEKEKDFRRRRRLHANRGMGSGKYKALRRRQVKIEAEAWEQAAKEY 211

Query: 704 QELLMDMCEQKL 739
           +ELL DMCE KL
Sbjct: 212 KELLKDMCEHKL 223


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  110 bits (276), Expect = 4e-22
 Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
 Frame = +2

Query: 167 LLFVCSLTYIH*NMWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEP 346
           L+F  + + I   +WRN ++Q+  RK +    S     A+  +   Q+S+F    +  E 
Sbjct: 23  LIFHKNPSMISTTVWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNFKPFEL 82

Query: 347 QN--ELFFSQDLISWRRQSEVSFLKYAFPNDTFRH------FGNTRTRGYAAVAEALVST 502
            +   L FS+  + +R +  +S  +      +F        F     +GYA+VAEA+ ST
Sbjct: 83  SSCSSLRFSE--VGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSST 140

Query: 503 SGSEEE--VDEVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETE 676
              EE   VDEVQEL+ +++ E   + +  +++ +     GMG GKY+ L+RRQIK+ETE
Sbjct: 141 DVEEEVSVVDEVQELLQQMSIE-EKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETE 199

Query: 677 AWEEAAKEYQELLMDMCEQKL 739
           AWE AAKEY+EL+MDMCEQKL
Sbjct: 200 AWERAAKEYRELMMDMCEQKL 220


>ref|XP_004172733.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like,
           partial [Cucumis sativus]
          Length = 234

 Score =  109 bits (273), Expect = 8e-22
 Identities = 81/196 (41%), Positives = 109/196 (55%), Gaps = 18/196 (9%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEK---TRSLEPQNELFFSQDL 376
           MWRN+ + +  RK K+FSE    F++  + K  +D IF+++   +RSLE  N    S   
Sbjct: 1   MWRNVFKTAASRKAKLFSE----FSSSTSRKVTEDHIFLDQIRSSRSLETLNTCCQSGG- 55

Query: 377 ISWRRQSEVSFL---KYAFPNDTFRHFGNT--------RTRGYAAVAEALV---STSGSE 514
                 S + FL   K  F N  F H  N           +GYA  AEA +     SGSE
Sbjct: 56  -----SSRIIFLHPQKVGFTNSNFPHSSNPVPFYGVLYHAKGYATAAEAAIFEGDLSGSE 110

Query: 515 EEVDEVQELIDEINKEINVKRSDIREQKQPK-MVGGMGLGKYNSLRRRQIKMETEAWEEA 691
           E    +QE+++ +NK+  V+       KQPK MV G    KY+ LR+RQIK+ETEAWEEA
Sbjct: 111 E----IQEIMEGLNKQDKVEL----HFKQPKGMVDGNRDTKYDMLRKRQIKIETEAWEEA 162

Query: 692 AKEYQELLMDMCEQKL 739
           AKEYQ+L+ D+CEQKL
Sbjct: 163 AKEYQDLIADICEQKL 178


>ref|XP_004135424.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 968

 Score =  109 bits (273), Expect = 8e-22
 Identities = 81/196 (41%), Positives = 109/196 (55%), Gaps = 18/196 (9%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEK---TRSLEPQNELFFSQDL 376
           MWRN+ + +  RK K+FSE    F++  + K  +D IF+++   +RSLE  N    S   
Sbjct: 1   MWRNVFKTAASRKAKLFSE----FSSSTSRKVTEDHIFLDQIRSSRSLETLNTCCQSGG- 55

Query: 377 ISWRRQSEVSFL---KYAFPNDTFRHFGNT--------RTRGYAAVAEALV---STSGSE 514
                 S + FL   K  F N  F H  N           +GYA  AEA +     SGSE
Sbjct: 56  -----SSRIIFLHPQKVGFTNSNFPHSSNPVPFYGVLYHAKGYATAAEAAIFEGDLSGSE 110

Query: 515 EEVDEVQELIDEINKEINVKRSDIREQKQPK-MVGGMGLGKYNSLRRRQIKMETEAWEEA 691
           E    +QE+++ +NK+  V+       KQPK MV G    KY+ LR+RQIK+ETEAWEEA
Sbjct: 111 E----IQEIMEGLNKQDKVEL----HFKQPKGMVDGNRDTKYDMLRKRQIKIETEAWEEA 162

Query: 692 AKEYQELLMDMCEQKL 739
           AKEYQ+L+ D+CEQKL
Sbjct: 163 AKEYQDLIADICEQKL 178


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score =  108 bits (271), Expect = 1e-21
 Identities = 75/191 (39%), Positives = 112/191 (58%), Gaps = 13/191 (6%)
 Frame = +2

Query: 206 MWRNLSRQSYLRKLK--IFSESHPSFNAFYAVKSPQDSIFIE--KTRSLEPQNELFFSQD 373
           MWRN+++++  R  +  ++ +S P    +  +   QD IF E  K  + EP +       
Sbjct: 40  MWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFS 99

Query: 374 LISWRRQSEVSFLKYAFPNDTF------RHFGNTRTRGYAAVAEALVSTSGSEEEV---D 526
            + +RR  E+S  + A    +F        F     + YA+VAEA VS++  EE+V   D
Sbjct: 100 EMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVAEA-VSSTDVEEDVSASD 158

Query: 527 EVQELIDEINKEINVKRSDIREQKQPKMVGGMGLGKYNSLRRRQIKMETEAWEEAAKEYQ 706
           E+QEL+ E+ KE   ++ + + +++ KM  GM  G+Y  LRRRQ+K+ETEAWE AAKEY+
Sbjct: 159 EIQELLGEMKKE-EKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYK 217

Query: 707 ELLMDMCEQKL 739
           ELLMDMCEQKL
Sbjct: 218 ELLMDMCEQKL 228