BLASTX nr result
ID: Rehmannia22_contig00018080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00018080
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351197.1| PREDICTED: WD repeat-containing protein RUP2... 112 3e-43
ref|XP_004249856.1| PREDICTED: protein SPA1-RELATED 3-like [Sola... 113 3e-43
ref|XP_002321910.2| hypothetical protein POPTR_0015s13210g, part... 110 7e-43
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric... 107 9e-41
ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citr... 112 3e-39
ref|XP_002318819.2| hypothetical protein POPTR_0012s13290g [Popu... 107 4e-39
gb|EMJ20682.1| hypothetical protein PRUPE_ppa022067mg [Prunus pe... 104 4e-39
gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis] 100 8e-39
ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2... 112 1e-38
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 106 5e-38
ref|XP_004309213.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 104 7e-38
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 105 1e-37
gb|EOY21331.1| Transducin/WD40 repeat-like superfamily protein [... 109 3e-36
gb|EPS69049.1| hypothetical protein M569_05710, partial [Genlise... 96 2e-35
ref|XP_006401846.1| hypothetical protein EUTSA_v10015606mg [Eutr... 91 2e-31
ref|NP_200038.1| UV-B induced transducin protein [Arabidopsis th... 91 9e-31
ref|XP_002864159.1| hypothetical protein ARALYDRAFT_495294 [Arab... 91 9e-31
gb|AAM64761.1| contains similarity to photomorphogenesis repress... 91 2e-30
ref|XP_006280618.1| hypothetical protein CARUB_v10026582mg [Caps... 91 5e-30
ref|NP_568435.2| WD repeat-containing protein RUP2 [Arabidopsis ... 107 2e-21
>ref|XP_006351197.1| PREDICTED: WD repeat-containing protein RUP2-like [Solanum
tuberosum]
Length = 370
Score = 112 bits (279), Expect(2) = 3e-43
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPG G RV+GSGDYDGVVMEYDLEK++PVFERDEHGG+RVWS+DY DP LGASGSDDG
Sbjct: 113 KPGLGGRVLGSGDYDGVVMEYDLEKKMPVFERDEHGGRRVWSIDYCHSDPVLGASGSDDG 172
Query: 182 T 184
T
Sbjct: 173 T 173
Score = 89.4 bits (220), Expect(2) = 3e-43
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Frame = +1
Query: 205 DLGNCVATVQVNR----PVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQ 372
D G C+A VQ + PVC VEFNPF G +VAVGCADR++Y YD R+M DP+FILDGHQ
Sbjct: 183 DNGKCLAMVQPTKEYSTPVCCVEFNPFKGPIVAVGCADRRVYAYDMRKMVDPLFILDGHQ 242
Query: 373 KAVT 384
KAVT
Sbjct: 243 KAVT 246
>ref|XP_004249856.1| PREDICTED: protein SPA1-RELATED 3-like [Solanum lycopersicum]
Length = 360
Score = 113 bits (283), Expect(2) = 3e-43
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPG GSRV+GSGDYDGVVMEYDLEK++PVFERDEHGG+RVWS+DY DP LGASGSDDG
Sbjct: 107 KPGLGSRVLGSGDYDGVVMEYDLEKKMPVFERDEHGGRRVWSIDYCQSDPVLGASGSDDG 166
Query: 182 T 184
T
Sbjct: 167 T 167
Score = 87.8 bits (216), Expect(2) = 3e-43
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Frame = +1
Query: 205 DLGNCVATVQVNR----PVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQ 372
D G C+A VQ + PVC VEFNPF G +VAVGCADR++Y YD R+M DP+F+LDGH+
Sbjct: 177 DSGKCLAMVQPTKGYSTPVCCVEFNPFKGPIVAVGCADRRVYAYDMRKMLDPLFVLDGHE 236
Query: 373 KAVT 384
KAVT
Sbjct: 237 KAVT 240
>ref|XP_002321910.2| hypothetical protein POPTR_0015s13210g, partial [Populus
trichocarpa] gi|550322626|gb|EEF06037.2| hypothetical
protein POPTR_0015s13210g, partial [Populus trichocarpa]
Length = 382
Score = 110 bits (276), Expect(2) = 7e-43
Identities = 48/61 (78%), Positives = 56/61 (91%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KP S RV+GS DYDGVVMEY+LE+R+P+FERDEHGG+RVWS+DYS CDPT+GASGSDDG
Sbjct: 115 KPRSDGRVLGSEDYDGVVMEYNLERRIPIFERDEHGGRRVWSVDYSHCDPTMGASGSDDG 174
Query: 182 T 184
T
Sbjct: 175 T 175
Score = 89.0 bits (219), Expect(2) = 7e-43
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
Frame = +1
Query: 211 GNCVATVQVN---RPVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAV 381
G CVATVQ + VC VEFNPF G +VA+GCADRK+YGYD R MADPVF+LDGH+K V
Sbjct: 186 GECVATVQPSVRRSAVCCVEFNPFGGPIVAIGCADRKVYGYDLRMMADPVFVLDGHRKTV 245
Query: 382 T 384
T
Sbjct: 246 T 246
>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
cop1, putative [Ricinus communis]
Length = 426
Score = 107 bits (267), Expect(2) = 9e-41
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KP SG RV+GSGDYDGVVMEYD+E R+P+FERDEHGG+R+WS+DYS P +GASGSDDG
Sbjct: 167 KPCSGGRVIGSGDYDGVVMEYDVETRIPIFERDEHGGRRIWSVDYSHWSPVVGASGSDDG 226
Query: 182 T 184
T
Sbjct: 227 T 227
Score = 85.5 bits (210), Expect(2) = 9e-41
Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 5/63 (7%)
Frame = +1
Query: 211 GNCVATVQVN-----RPVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQK 375
G CVATV+ + R VCSVEFNPF G ++AVGCADR++YGYD R + +PVF+LDGH+K
Sbjct: 238 GGCVATVKPSVTSSCRAVCSVEFNPFGGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKK 297
Query: 376 AVT 384
VT
Sbjct: 298 TVT 300
>ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citrus clementina]
gi|557523775|gb|ESR35142.1| hypothetical protein
CICLE_v10005222mg [Citrus clementina]
Length = 366
Score = 112 bits (281), Expect(2) = 3e-39
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPG+ RV+GSGDYDGVVMEYDLEK+VP+FERDEHGG+RVWS+DYS DP LGASGSDDG
Sbjct: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
Query: 182 T 184
T
Sbjct: 166 T 166
Score = 75.1 bits (183), Expect(2) = 3e-39
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Frame = +1
Query: 205 DLGNCVATVQVNRP---VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQK 375
D G CV+TVQ + VC VEF+PF +VA GCAD+K Y YD R+M DPV + DGH+K
Sbjct: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
Query: 376 AVT 384
VT
Sbjct: 235 TVT 237
>ref|XP_002318819.2| hypothetical protein POPTR_0012s13290g [Populus trichocarpa]
gi|550327039|gb|EEE97039.2| hypothetical protein
POPTR_0012s13290g [Populus trichocarpa]
Length = 390
Score = 107 bits (268), Expect(2) = 4e-39
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KP S RV+GSGDYDGVVMEY LE+R+P+FERDEHGG+RVWS+DYS DP LGASGSDDG
Sbjct: 134 KPSSDGRVLGSGDYDGVVMEYCLERRIPIFERDEHGGRRVWSVDYSHWDPVLGASGSDDG 193
Query: 182 T 184
T
Sbjct: 194 T 194
Score = 79.7 bits (195), Expect(2) = 4e-39
Identities = 41/61 (67%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = +1
Query: 211 GNCVATVQ--VNRP-VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAV 381
G VATVQ V R VC VEFNPF G +VAVGCADR++YGYD R DPVF+LDGH+K V
Sbjct: 205 GEGVATVQPGVGRSAVCCVEFNPFGGPIVAVGCADRRVYGYDIRMTGDPVFVLDGHRKTV 264
Query: 382 T 384
T
Sbjct: 265 T 265
>gb|EMJ20682.1| hypothetical protein PRUPE_ppa022067mg [Prunus persica]
Length = 380
Score = 104 bits (259), Expect(2) = 4e-39
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
+PGS RV+ SGDYDGVV EYDLE R+P+FERDEHGG+RVWS+DYS DP LGASGSDDG
Sbjct: 114 RPGSDGRVLCSGDYDGVVTEYDLETRLPIFERDEHGGRRVWSVDYSHSDPFLGASGSDDG 173
Query: 182 T 184
T
Sbjct: 174 T 174
Score = 83.2 bits (204), Expect(2) = 4e-39
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Frame = +1
Query: 205 DLGNCVATVQVNR---PVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQK 375
D G CVA+VQ ++ PVC +EF+PF G +VAVGCADR+ YGYD R+M DPV + DGH+K
Sbjct: 183 DGGECVASVQPSKAGNPVCCLEFDPFGGALVAVGCADRRAYGYDMRKMVDPVLVFDGHRK 242
Query: 376 AVT 384
VT
Sbjct: 243 TVT 245
>gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
Length = 396
Score = 100 bits (249), Expect(2) = 8e-39
Identities = 46/64 (71%), Positives = 54/64 (84%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYS---GCDPTLGASGS 172
+PG+G R++GSGDYDGVV EYDLE+R PVFERDEHGG+RVWS+DYS GC + ASGS
Sbjct: 135 RPGAGGRIIGSGDYDGVVTEYDLERRTPVFERDEHGGRRVWSVDYSHWEGCS-VMAASGS 193
Query: 173 DDGT 184
DDGT
Sbjct: 194 DDGT 197
Score = 85.9 bits (211), Expect(2) = 8e-39
Identities = 42/64 (65%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
Frame = +1
Query: 205 DLGNCVATVQVNRP----VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQ 372
D G CVATV+ + VC VEFNPF G +VAVGCADRK YGYD R+++DPV ILDGHQ
Sbjct: 206 DGGECVATVRPSATKTSSVCCVEFNPFGGPLVAVGCADRKAYGYDVRKLSDPVLILDGHQ 265
Query: 373 KAVT 384
K VT
Sbjct: 266 KTVT 269
>ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2-like [Citrus sinensis]
Length = 366
Score = 112 bits (281), Expect(2) = 1e-38
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPG+ RV+GSGDYDGVVMEYDLEK+VP+FERDEHGG+RVWS+DYS DP LGASGSDDG
Sbjct: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
Query: 182 T 184
T
Sbjct: 166 T 166
Score = 72.8 bits (177), Expect(2) = 1e-38
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = +1
Query: 205 DLGNCVATVQVNRP---VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQK 375
D G CV+ VQ + VC VEF+PF +VA GCAD+K Y YD R+M DPV + DGH+K
Sbjct: 175 DGGKCVSMVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
Query: 376 AVT 384
VT
Sbjct: 235 TVT 237
>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 383
Score = 106 bits (265), Expect(2) = 5e-38
Identities = 45/61 (73%), Positives = 55/61 (90%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPGS RV+GSGDYDGVV EYDL++++P+FERDEHGG+R+WS+DYS DP +GASGSDDG
Sbjct: 125 KPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGGRRIWSVDYSHWDPFVGASGSDDG 184
Query: 182 T 184
T
Sbjct: 185 T 185
Score = 77.0 bits (188), Expect(2) = 5e-38
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
VC VEFNPF G ++AVGCADR+ YGYD R+M DPV I DGHQK VT
Sbjct: 211 VCCVEFNPFGGPLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTVT 256
>ref|XP_004309213.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Fragaria vesca
subsp. vesca]
Length = 385
Score = 104 bits (260), Expect(2) = 7e-38
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
+PGSG RV+GSGDYDGVV EYDLE R+PVFERDEHGG+RVWS+DY+ LGASGSDDG
Sbjct: 124 RPGSGGRVLGSGDYDGVVTEYDLESRLPVFERDEHGGRRVWSLDYNSDPGCLGASGSDDG 183
Query: 182 T 184
T
Sbjct: 184 T 184
Score = 78.6 bits (192), Expect(2) = 7e-38
Identities = 38/63 (60%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Frame = +1
Query: 205 DLGNCVATV---QVNRPVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQK 375
+ G CVA V + PVC VEFNPF G ++AVGCADRK Y YDARRM+ PV DGH K
Sbjct: 193 EAGECVARVVPSEAGNPVCCVEFNPFGGPLLAVGCADRKAYVYDARRMSGPVLSFDGHDK 252
Query: 376 AVT 384
VT
Sbjct: 253 TVT 255
>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 382
Score = 105 bits (261), Expect(2) = 1e-37
Identities = 44/61 (72%), Positives = 55/61 (90%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPGS RV+GSGDYDGVV EYDL++++P+FERDEHGG+R+WS+DYS +P +GASGSDDG
Sbjct: 125 KPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRIWSVDYSHWNPFVGASGSDDG 184
Query: 182 T 184
T
Sbjct: 185 T 185
Score = 77.0 bits (188), Expect(2) = 1e-37
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
VC VEFNPF G +VAVGCADR+ YGYD R+M DPV I DGHQK VT
Sbjct: 211 VCCVEFNPFGGPLVAVGCADRRAYGYDVRKMVDPVLIFDGHQKPVT 256
>gb|EOY21331.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 414
Score = 109 bits (273), Expect(2) = 3e-36
Identities = 47/61 (77%), Positives = 57/61 (93%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTLGASGSDDG 181
KPGSG R++GSGDYDGVVMEYDLE+++P+FERDEHGG+RVWS+DYS DP +GASGS+DG
Sbjct: 156 KPGSGGRLLGSGDYDGVVMEYDLERKLPIFERDEHGGRRVWSVDYSHWDPFVGASGSEDG 215
Query: 182 T 184
T
Sbjct: 216 T 216
Score = 68.2 bits (165), Expect(2) = 3e-36
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +1
Query: 211 GNCVATVQ---VNRPVCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAV 381
G CVA VQ VC VEF+PF ++A GCADRK Y YD R+M +P+ + DGH K V
Sbjct: 228 GGCVAKVQPALARSSVCCVEFDPFGEALIAAGCADRKAYTYDVRKMVEPLHVYDGHTKTV 287
Query: 382 T 384
T
Sbjct: 288 T 288
>gb|EPS69049.1| hypothetical protein M569_05710, partial [Genlisea aurea]
Length = 357
Score = 95.5 bits (236), Expect(2) = 2e-35
Identities = 43/63 (68%), Positives = 54/63 (85%), Gaps = 2/63 (3%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSG--CDPTLGASGSD 175
KPGSGSR++GSGDYDGVV+E+DLE+R PV+ERDEH G+RVWS+DY+ ++GAS SD
Sbjct: 93 KPGSGSRILGSGDYDGVVLEHDLERRFPVYERDEHSGRRVWSIDYASEYSSLSVGASASD 152
Query: 176 DGT 184
DGT
Sbjct: 153 DGT 155
Score = 79.3 bits (194), Expect(2) = 2e-35
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
+CSVEFNPF GH+V VG ADR++YGYD RRMA PVF LDGHQK VT
Sbjct: 182 ICSVEFNPFGGHLVVVGSADRRVYGYDVRRMAAPVFKLDGHQKPVT 227
>ref|XP_006401846.1| hypothetical protein EUTSA_v10015606mg [Eutrema salsugineum]
gi|557102936|gb|ESQ43299.1| hypothetical protein
EUTSA_v10015606mg [Eutrema salsugineum]
Length = 400
Score = 91.3 bits (225), Expect(2) = 2e-31
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYS-GCDPTLGASGSDD 178
+P RV+GSGDYDGVV EYD+EK VPVFERDEHGG+R+WS+DY+ +GASGSDD
Sbjct: 145 RPDLSGRVIGSGDYDGVVTEYDVEKGVPVFERDEHGGRRIWSVDYTLQNGSVIGASGSDD 204
Query: 179 GT 184
GT
Sbjct: 205 GT 206
Score = 70.5 bits (171), Expect(2) = 2e-31
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
+CSVEF+PF G+ +AVGCADR Y YD RR+ DPV +LDGH K VT
Sbjct: 230 ICSVEFDPFGGYFLAVGCADRNAYVYDIRRLVDPVVVLDGHTKTVT 275
>ref|NP_200038.1| UV-B induced transducin protein [Arabidopsis thaliana]
gi|75335470|sp|Q9LTJ6.1|RUP1_ARATH RecName: Full=WD
repeat-containing protein RUP1; AltName: Full=Protein
EARLY FLOWERING BY OVEREXPRESSION 1; AltName:
Full=Protein REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1
gi|8885538|dbj|BAA97468.1| unnamed protein product
[Arabidopsis thaliana] gi|27808604|gb|AAO24582.1|
At5g52250 [Arabidopsis thaliana]
gi|110736198|dbj|BAF00070.1| hypothetical protein
[Arabidopsis thaliana] gi|332008809|gb|AED96192.1| UV-B
induced transducin protein [Arabidopsis thaliana]
Length = 385
Score = 90.5 bits (223), Expect(2) = 9e-31
Identities = 42/62 (67%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTL-GASGSDD 178
+P RV+GSGDYDGVV EYD+EK+VPV ERDEHGG+R+WS+DY+ + +L GASGSDD
Sbjct: 130 RPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDD 189
Query: 179 GT 184
GT
Sbjct: 190 GT 191
Score = 68.9 bits (167), Expect(2) = 9e-31
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
+CSVEF+PF G +AVGCADR Y YD RR+ DP+ +LDGH K VT
Sbjct: 215 ICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVT 260
>ref|XP_002864159.1| hypothetical protein ARALYDRAFT_495294 [Arabidopsis lyrata subsp.
lyrata] gi|297309994|gb|EFH40418.1| hypothetical protein
ARALYDRAFT_495294 [Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 90.5 bits (223), Expect(2) = 9e-31
Identities = 42/62 (67%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTL-GASGSDD 178
+P RV+GSGDYDGVV EYD+EK+VPV ERDEHGG+R+WS+DY+ + +L GASGSDD
Sbjct: 129 RPDLSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDD 188
Query: 179 GT 184
GT
Sbjct: 189 GT 190
Score = 68.9 bits (167), Expect(2) = 9e-31
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
+CSVEF+PF G +AVGCADR Y YD RR+ DP+ +LDGH K VT
Sbjct: 214 ICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVT 259
>gb|AAM64761.1| contains similarity to photomorphogenesis repressor protein
[Arabidopsis thaliana]
Length = 385
Score = 90.5 bits (223), Expect(2) = 2e-30
Identities = 42/62 (67%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPT-LGASGSDD 178
+P RV+GSGDYDGVV EYD+EK+VPV ERDEHGG+R+WS+DY+ + + LGASGSDD
Sbjct: 130 RPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLLGASGSDD 189
Query: 179 GT 184
GT
Sbjct: 190 GT 191
Score = 67.4 bits (163), Expect(2) = 2e-30
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
+CSVEF+PF G +AVGCAD+ Y YD RR+ DP+ +LDGH K VT
Sbjct: 215 ICSVEFDPFGGSSIAVGCADQNAYVYDIRRLVDPLIVLDGHTKTVT 260
>ref|XP_006280618.1| hypothetical protein CARUB_v10026582mg [Capsella rubella]
gi|482549322|gb|EOA13516.1| hypothetical protein
CARUB_v10026582mg [Capsella rubella]
Length = 385
Score = 90.5 bits (223), Expect(2) = 5e-30
Identities = 41/62 (66%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYSGCDPTL-GASGSDD 178
+P RV+GSGDYDGVV EYD+EK+VP+FERDEHGG+R+WS+DY+ + +L ASGSDD
Sbjct: 130 RPDLSGRVIGSGDYDGVVTEYDVEKQVPIFERDEHGGRRIWSVDYTLHNGSLVAASGSDD 189
Query: 179 GT 184
GT
Sbjct: 190 GT 191
Score = 66.2 bits (160), Expect(2) = 5e-30
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 247 VCSVEFNPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
VCSVEF+P G +AVGCADR Y YD RR+ DP+ +LDGH K VT
Sbjct: 215 VCSVEFDPLGGSSLAVGCADRNAYVYDIRRLVDPLLVLDGHTKTVT 260
>ref|NP_568435.2| WD repeat-containing protein RUP2 [Arabidopsis thaliana]
gi|75333740|sp|Q9FFA7.1|RUP2_ARATH RecName: Full=WD
repeat-containing protein RUP2; AltName: Full=Protein
EARLY FLOWERING BY OVEREXPRESSION 2; AltName:
Full=Protein EPRESSOR OF UV-B PHOTOMORPHOGENESIS 2
gi|10176840|dbj|BAB10046.1| unnamed protein product
[Arabidopsis thaliana] gi|332005822|gb|AED93205.1| WD
repeat-containing protein RUP2 [Arabidopsis thaliana]
Length = 368
Score = 107 bits (267), Expect = 2e-21
Identities = 50/63 (79%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +2
Query: 2 KPGSGSRVVGSGDYDGVVMEYDLEKRVPVFERDEHGGKRVWSMDYS--GCDPTLGASGSD 175
+PGSG RV+GSGDYDGVVMEYDLEKR PVFERDEHGG+RVWS+DY+ G T+GASGSD
Sbjct: 108 RPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSD 167
Query: 176 DGT 184
DGT
Sbjct: 168 DGT 170
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = +1
Query: 97 RRAWRKTGMEHG----LFGL*PDPGRIRVGRWDXXXXXXXDLGNCVATVQVNRPVCSVEF 264
RR W HG + D G ++V WD +G VC VEF
Sbjct: 145 RRVWSVDYTRHGGASTVGASGSDDGTMQV--WDPRCPPEESVGVVRPAGICRSAVCCVEF 202
Query: 265 NPFIGHMVAVGCADRKIYGYDARRMADPVFILDGHQKAVT 384
+P G VAVGCADRK Y YD R++ DP L GH K V+
Sbjct: 203 DPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVS 242