BLASTX nr result
ID: Rehmannia22_contig00017729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00017729
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006417635.1| hypothetical protein EUTSA_v10008780mg [Eutr... 100 3e-19
ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thalian... 99 6e-19
ref|XP_002894599.1| hypothetical protein ARALYDRAFT_337754 [Arab... 99 6e-19
ref|XP_002868724.1| hypothetical protein ARALYDRAFT_916372 [Arab... 99 6e-19
ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|3555008... 99 8e-19
ref|XP_004494649.1| PREDICTED: histone H2AX-like [Cicer arietinum] 98 1e-18
sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb... 98 1e-18
ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arab... 98 1e-18
ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Frag... 97 2e-18
ref|XP_006302804.1| hypothetical protein CARUB_v10020931mg [Caps... 97 2e-18
ref|NP_172363.1| putative histone H2AXa [Arabidopsis thaliana] g... 97 3e-18
ref|XP_006305729.1| hypothetical protein CARUB_v10010499mg, part... 97 3e-18
gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus pe... 97 3e-18
ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativu... 96 4e-18
gb|EXB93885.1| Histone H2AX [Morus notabilis] 96 5e-18
ref|XP_002319038.2| hypothetical protein POPTR_0013s02990g [Popu... 96 5e-18
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121... 96 5e-18
gb|AFK45499.1| unknown [Lotus japonicus] 96 6e-18
ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu... 95 8e-18
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|566169383... 95 1e-17
>ref|XP_006417635.1| hypothetical protein EUTSA_v10008780mg [Eutrema salsugineum]
gi|557095406|gb|ESQ35988.1| hypothetical protein
EUTSA_v10008780mg [Eutrema salsugineum]
Length = 207
Score = 99.8 bits (247), Expect = 3e-19
Identities = 52/57 (91%), Positives = 54/57 (94%), Gaps = 1/57 (1%)
Frame = +3
Query: 144 KMSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
KMS+ A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 65 KMSTGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 121
>ref|NP_175868.1| gamma histone variant H2AX [Arabidopsis thaliana]
gi|567130275|ref|XP_006392493.1| hypothetical protein
EUTSA_v10023750mg [Eutrema salsugineum]
gi|75313113|sp|Q9S9K7.1|H2AXB_ARATH RecName:
Full=Probable histone H2AXb; AltName: Full=HTA3
gi|15724172|gb|AAL06478.1|AF411788_1 At1g54690/T22H22_12
[Arabidopsis thaliana] gi|3776566|gb|AAC64883.1| Strong
similarity to histone H2A gb|AJ006768 from Cicer
arietinum [Arabidopsis thaliana]
gi|20334846|gb|AAM16179.1| At1g54690/T22H22_12
[Arabidopsis thaliana] gi|21553797|gb|AAM62890.1|
histone H2A, putative [Arabidopsis thaliana]
gi|332195014|gb|AEE33135.1| gamma histone variant H2AX
[Arabidopsis thaliana] gi|557088999|gb|ESQ29779.1|
hypothetical protein EUTSA_v10023750mg [Eutrema
salsugineum]
Length = 142
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/56 (92%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 MSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MSS A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 1 MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 56
>ref|XP_002894599.1| hypothetical protein ARALYDRAFT_337754 [Arabidopsis lyrata subsp.
lyrata] gi|297340441|gb|EFH70858.1| hypothetical protein
ARALYDRAFT_337754 [Arabidopsis lyrata subsp. lyrata]
Length = 209
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/56 (92%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 MSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MSS A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 1 MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 56
>ref|XP_002868724.1| hypothetical protein ARALYDRAFT_916372 [Arabidopsis lyrata subsp.
lyrata] gi|297314560|gb|EFH44983.1| hypothetical protein
ARALYDRAFT_916372 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/56 (92%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 MSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MSS A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 1 MSSGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 56
>ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|355500896|gb|AES82099.1|
Histone H2A [Medicago truncatula]
gi|388495504|gb|AFK35818.1| unknown [Medicago
truncatula]
Length = 142
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/54 (90%), Positives = 50/54 (92%)
Frame = +3
Query: 150 SSNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
S A TTKGGRGKPKA+KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 3 SKGATTTTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 56
>ref|XP_004494649.1| PREDICTED: histone H2AX-like [Cicer arietinum]
Length = 139
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = +3
Query: 156 NAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
++ ATTKGGRGKPKA+KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 2 SSTATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 53
>sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb|CAA07234.1| histone H2A
[Cicer arietinum]
Length = 139
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = +3
Query: 156 NAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
++ ATTKGGRGKPKA+KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 2 SSTATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 53
>ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp.
lyrata] gi|297338317|gb|EFH68734.1| hypothetical protein
ARALYDRAFT_888122 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/56 (91%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 MSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MS+ A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 1 MSTGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 56
>ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Fragaria vesca subsp.
vesca]
Length = 141
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +3
Query: 147 MSSNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MS +TKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP
Sbjct: 1 MSGKESGSTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAP 55
>ref|XP_006302804.1| hypothetical protein CARUB_v10020931mg [Capsella rubella]
gi|482571514|gb|EOA35702.1| hypothetical protein
CARUB_v10020931mg [Capsella rubella]
Length = 218
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/57 (89%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
Frame = +3
Query: 144 KMSSNAPAT-TKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
KMSS A + +KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 76 KMSSGAGSEKSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 132
>ref|NP_172363.1| putative histone H2AXa [Arabidopsis thaliana]
gi|75276926|sp|O04848.1|H2AXA_ARATH RecName:
Full=Probable histone H2AXa; AltName: Full=HTA5
gi|15724304|gb|AAL06545.1|AF412092_1 At1g08880/F7G19_24
[Arabidopsis thaliana] gi|1922944|gb|AAB70416.1| Strong
similarity to Picea histone H2A (gb|X67819). ESTs
gb|ATTS3874,gb|T46627,gb|T14194 come from this gene
[Arabidopsis thaliana] gi|20334750|gb|AAM16236.1|
At1g08880/F7G19_24 [Arabidopsis thaliana]
gi|332190240|gb|AEE28361.1| putative histone H2AXa
[Arabidopsis thaliana]
Length = 142
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/56 (89%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 MSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MS+ A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP
Sbjct: 1 MSTGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAP 56
>ref|XP_006305729.1| hypothetical protein CARUB_v10010499mg, partial [Capsella rubella]
gi|482574440|gb|EOA38627.1| hypothetical protein
CARUB_v10010499mg, partial [Capsella rubella]
Length = 164
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/56 (89%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Frame = +3
Query: 147 MSSNAPA-TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MS+ A + TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP
Sbjct: 23 MSTGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAP 78
>gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus persica]
Length = 141
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/55 (87%), Positives = 50/55 (90%)
Frame = +3
Query: 147 MSSNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MSS +TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 1 MSSKEAGSTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAP 55
>ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativus]
gi|449528788|ref|XP_004171385.1| PREDICTED: histone
H2AX-like [Cucumis sativus]
Length = 139
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +3
Query: 156 NAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
++ A+TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 2 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAP 53
>gb|EXB93885.1| Histone H2AX [Morus notabilis]
Length = 141
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/55 (85%), Positives = 49/55 (89%)
Frame = +3
Query: 147 MSSNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MSS +TKGGRGKPKA+KSVSRSSKAGLQFPVGRIARFLK GKYAERVG GAP
Sbjct: 1 MSSTVAGSTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKVGKYAERVGGGAP 55
>ref|XP_002319038.2| hypothetical protein POPTR_0013s02990g [Populus trichocarpa]
gi|550324815|gb|EEE94961.2| hypothetical protein
POPTR_0013s02990g [Populus trichocarpa]
Length = 185
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/57 (87%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
Frame = +3
Query: 144 KMSSN-APATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
KMSS A+TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 43 KMSSKEGGASTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAP 99
>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
Histone H2A [Medicago truncatula]
gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
[Medicago truncatula] gi|124360160|gb|ABN08176.1|
Histone H2A; Histone-fold [Medicago truncatula]
gi|355501355|gb|AES82558.1| Histone H2A [Medicago
truncatula] gi|355501357|gb|AES82560.1| Histone H2A
[Medicago truncatula] gi|388498640|gb|AFK37386.1|
unknown [Medicago truncatula]
Length = 139
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 156 NAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
++ TTKGGRGKPKA KSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 2 SSTGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 53
>gb|AFK45499.1| unknown [Lotus japonicus]
Length = 141
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/55 (87%), Positives = 48/55 (87%)
Frame = +3
Query: 147 MSSNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
MSS TKGGRGKPKA KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 1 MSSTGGNNTKGGRGKPKAAKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAP 55
>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
gi|449485770|ref|XP_004157270.1| PREDICTED: probable
histone H2AXb-like [Cucumis sativus]
Length = 140
Score = 95.1 bits (235), Expect = 8e-18
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +3
Query: 153 SNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
S+ +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 2 SSTGGSTKGGRGKPKATKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAP 54
>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|566169383|ref|XP_006382663.1|
histone H2A family protein [Populus trichocarpa]
gi|566256156|ref|XP_006388063.1| hypothetical protein
POPTR_0369s00210g [Populus trichocarpa]
gi|550309370|gb|ERP46977.1| hypothetical protein
POPTR_0369s00210g [Populus trichocarpa]
gi|550338028|gb|ERP60460.1| histone H2A family protein
[Populus trichocarpa]
Length = 142
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +3
Query: 150 SSNAPATTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP 311
S A+TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAP
Sbjct: 3 SKEGGASTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAP 56