BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00017721
         (2252 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...   716   0.0  
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp...   696   0.0  
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   684   0.0  
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   642   0.0  
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...   642   0.0  
gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus pe...   636   e-179
gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative ...   629   e-177
gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative ...   629   e-177
gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative ...   629   e-177
gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative ...   629   e-177
gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative ...   629   e-177
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat...   615   e-173
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   614   e-173
gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlise...   602   e-169
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   591   e-166
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   591   e-166
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   591   e-166
gb|ESW11169.1| hypothetical protein PHAVU_008G007700g [Phaseolus...   571   e-160
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp...   561   e-157
ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron sp...   561   e-157

>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score =  716 bits (1847), Expect = 0.0
 Identities = 404/725 (55%), Positives = 497/725 (68%), Gaps = 8/725 (1%)
 Frame = +2

Query: 101  MSASPFLTHFSNAITPFLYNPSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSA 280
            MSA   L   SN +     N        L S      F +FSS  ++N +     E+ + 
Sbjct: 1    MSAPLVLAPNSNTLCYHHSNSFINQKTLLFSKSFNSKFTSFSSQYNDNNNPIKNEEQYNL 60

Query: 281  KYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGE 460
            ++E  D Y  SS       S IK PTAPWM  PLL++PN+ ++ +K R KKD    +  +
Sbjct: 61   EFENQD-YGSSS-------SGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKT-Q 111

Query: 461  HPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGN 631
            +P+ AL+GKV G RGK AMK I++GI+KLQET   E    +T   ++F+F PG L  WG+
Sbjct: 112  NPNDALSGKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGD 171

Query: 632  GVYESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXX---PWLRDERMVIRRVKK 799
              YE + E   Y EE  + SLE  EF +                 PW  + R+V RR+KK
Sbjct: 172  VSYEIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKK 230

Query: 800  EKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFD 979
            EKVV  AES+LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+HFIW+NNELA+LKFD
Sbjct: 231  EKVVMTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFD 290

Query: 980  IPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSS 1159
            +PLC+NMDRA+EIVEMKTGG VVW  ++ L VYRG  Y    K +++   + +   +NSS
Sbjct: 291  LPLCRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQH---DFLCSHQNSS 347

Query: 1160 STMNYQNTTTFARVSSDGSSLDETIHGKDDKWESLQM-ASLYEREADRLLDGLGPRFVDW 1336
             T N + T+ F+ ++S GSS DE I   + + +SL M  SLY REA+RLLD LGPR+VDW
Sbjct: 348  FTENIKQTSIFSPLNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDW 407

Query: 1337 WMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNR 1516
            W  KPLPV+ DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNR
Sbjct: 408  WWPKPLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNR 467

Query: 1517 KLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRG 1696
            KLQGLAAA++KLWEKCHIAKIALKWG+PNT NE MANELK LTGGVLLLRNKF IILYRG
Sbjct: 468  KLQGLAAAVVKLWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRG 527

Query: 1697 KDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIH 1876
            KDFLPS+VA +V ERE+ LTRCQL+EE AR KA ET  IT E  + S   GTLSEF +  
Sbjct: 528  KDFLPSQVANLVAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQT-- 585

Query: 1877 LDIGNLKKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSE 2056
              I    K+K+EV+VQ             +Q+  L ILKKKIEKS+  L KL  A R ++
Sbjct: 586  --IAEPGKEKSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAK 643

Query: 2057 QDPDMEIISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKK 2236
            +D D EI+++EERR LR+IGLK D SLVLGRRGV+DGV+ G+HQHWKHRE++KVITMQK 
Sbjct: 644  EDDDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKI 703

Query: 2237 FSQVM 2251
            FSQV+
Sbjct: 704  FSQVI 708


>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 766

 Score =  696 bits (1795), Expect = 0.0
 Identities = 397/725 (54%), Positives = 483/725 (66%), Gaps = 8/725 (1%)
 Frame = +2

Query: 101  MSASPFLTHFSNAITPFLYNPSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSA 280
            MSA+  +   SN +     N        L S      F TFSS  ++N +   K+E+ + 
Sbjct: 1    MSATLLVAPNSNTLCCHHANSFINQKTLLFSKSFNSKFTTFSSQSNDNNNPIKKVEQCNL 60

Query: 281  KYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGE 460
            ++E  D Y  SS       S IK PTAPWM  PLL++PN++++ +K R KKD    +  +
Sbjct: 61   EFENQD-YGSSS-------SGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKT-Q 111

Query: 461  HPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLK--FKFAPGDL--WG 628
            +P+ AL+GKV G RGK AMK I++GI+KLQET  + E +Q   ++K  F+F PG L  WG
Sbjct: 112  NPNDALSGKVSGGRGKKAMKMIYQGIDKLQETQ-IGECTQVETDVKVEFQFPPGSLSGWG 170

Query: 629  NGVYESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXX---PWLRDERMVIRRVK 796
            +  YE + E   Y EE  + SLE  EF +                 PW  +ER+V RR+K
Sbjct: 171  DVSYEIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMK 229

Query: 797  KEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKF 976
            KEKVV  AES+LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+ FIW+NNELA+LKF
Sbjct: 230  KEKVVRTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKF 289

Query: 977  DIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENS 1156
            D+PLC+NMDRA++IVEMKTGG VVW  ++ L VYRG  YE            SVG+ E  
Sbjct: 290  DLPLCRNMDRARDIVEMKTGGFVVWMKQNALVVYRG--YEM----------ISVGNSEED 337

Query: 1157 SSTMNYQNTTTFARVSSDGSSLDETIHGKDDKWESLQMASLYEREADRLLDGLGPRFVDW 1336
            S  MN                                  SLYEREA+RLLD LGPR+VDW
Sbjct: 338  SLVMN---------------------------------ESLYEREANRLLDDLGPRYVDW 364

Query: 1337 WMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNR 1516
            W  KPLPVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNR
Sbjct: 365  WWPKPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNR 424

Query: 1517 KLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRG 1696
            KLQGLAAA++KLWEKCHIAKIALKWG+PN  NE MANELK LTGGVLLLRNKF IILYRG
Sbjct: 425  KLQGLAAALVKLWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRG 484

Query: 1697 KDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIH 1876
            KDFLPS+VAK+V ERE+ LTRCQL+EE AR KA ET  IT E  + S + GTLSEF +  
Sbjct: 485  KDFLPSQVAKLVAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQT-- 542

Query: 1877 LDIGNLKKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSE 2056
              I    K+K+EV+VQ             +Q+  L+ILKKKIEKS+  L KL  A R ++
Sbjct: 543  --IAEPGKEKSEVEVQLMSEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAK 600

Query: 2057 QDPDMEIISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKK 2236
            +D D EI+++EERR LR+IGLK D SLVLGRRGV+DGV+ G+HQHWKHRE++KVITMQK 
Sbjct: 601  EDDDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKI 660

Query: 2237 FSQVM 2251
            FSQV+
Sbjct: 661  FSQVI 665


>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  684 bits (1766), Expect = 0.0
 Identities = 375/716 (52%), Positives = 465/716 (64%), Gaps = 23/716 (3%)
 Frame = +2

Query: 173  PTPFLSSNPSKYNFITFSS-----PPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSG 337
            P P  S  PS  N ++ SS     P   +      I   +     H  ++ SS+    + 
Sbjct: 11   PIPNHSQFPSNSNSLSNSSIRILNPQRIHSFKPPPISATTTATTNHPDHSISSQPVSGTD 70

Query: 338  STIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENG-EHPDMALTGKVGGARGKVA 514
            + IK PTAPWM  PLL++PNE+++ +K R KK    G  G E PD +LT KV G RG  A
Sbjct: 71   AAIKMPTAPWMKGPLLLQPNEVLDLSKARPKK--VAGSAGAEKPDRSLTEKVSGGRGAKA 128

Query: 515  MKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLE 694
            MKKI + I KLQETH  +E  +  E  +F                           +SLE
Sbjct: 129  MKKIMQSIVKLQETHTSDETQENTEEFEFG--------------------------VSLE 162

Query: 695  STEFDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAM 874
                D               PWL+ E++V RR KKEKVVTAAE +LD +LLERLR EA  
Sbjct: 163  GIGGD------ENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVK 216

Query: 875  IRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWR 1054
            +RKWVKVKKAGVT++VVDQ+H +W+++ELA++KFD+PLC+NMDRA+EI+E+KT G+V+W 
Sbjct: 217  MRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWS 276

Query: 1055 NKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN---YQNTTTFARVSSDGSSLD 1225
             KD L VYRG  Y+S SKH + +R   V   + S+S +N   +++  T + +    S+  
Sbjct: 277  KKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTG 336

Query: 1226 ETIHGKDDKWESLQMA--------------SLYEREADRLLDGLGPRFVDWWMQKPLPVD 1363
            E +  KD + +S                  SLYEREADRLLDGLGPRF+DWW  KPLPVD
Sbjct: 337  EKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVD 396

Query: 1364 GDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAI 1543
             DLLPE++PGF+ PFRL PP TRSKLTD ELTYLRKLA  LPTHFVLGRNRKLQGLAAAI
Sbjct: 397  ADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAI 456

Query: 1544 LKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVA 1723
            LKLWEK  I KIA+KWG+PNT NEQMANELK LTGGVLLLRNKF IILYRGKDFLP  VA
Sbjct: 457  LKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVA 516

Query: 1724 KVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKD 1903
             ++ EREM    CQ++EE ARLKA ET  +T +   ++   GTLSEF +I  +   LK  
Sbjct: 517  NLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDG 576

Query: 1904 KAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIIS 2083
              E++V+              QER LFILK+KIE+SAKVL KL +A R ++ D D E+I+
Sbjct: 577  NTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMIT 636

Query: 2084 EEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            EEER C R+IG K DSSL+LGRRGV+DGVIEG+HQHWKHREIVKVITMQ+ FSQV+
Sbjct: 637  EEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVL 692


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  642 bits (1657), Expect = 0.0
 Identities = 350/649 (53%), Positives = 435/649 (67%), Gaps = 14/649 (2%)
 Frame = +2

Query: 347  KAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKI 526
            K PTAPWM  P++++P+EI++ +K +TKK F      +  D  LT K  G RGK AMKKI
Sbjct: 54   KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSF------KKTDKGLTAKESGVRGKQAMKKI 107

Query: 527  FKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEF 706
             + IEKLQ+   L+E +Q     KF+F        G +E +   +E              
Sbjct: 108  IENIEKLQKDQILDE-TQKKVMEKFEF-------KGCFEENVSHEE-------------- 145

Query: 707  DIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKW 886
                            PWLR++R V RR+KKE++VT AE+ LDG LLERL+DEA  +RKW
Sbjct: 146  ------DLRGGFGGKVPWLREDRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKW 199

Query: 887  VKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDF 1066
            VKVKKAGVT++VV ++   WR NELA++KFD+PLC+NMDRA+EI+E+KTGG+V+W  KD 
Sbjct: 200  VKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDA 259

Query: 1067 LAVYRGRIYESGSKHIRNIRRNSVGDRE---NSSSTMNYQNTTTFARVSSDGSSLDETIH 1237
              VYRG      SK    +   S  D+E   + S+ ++ +     + + S+ ++LD+   
Sbjct: 260  HVVYRG----DSSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRS 315

Query: 1238 GKDDKWESLQMA-----------SLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPEL 1384
             KD +  SL  +           SLYERE DRLLDGLGPRFVDWWM KPLPVDGDLLPE+
Sbjct: 316  LKDGEENSLPTSIFMDKNLRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEV 375

Query: 1385 VPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKC 1564
            VPGFK PFRL PP  RSKLTD ELTYLRKLA PLPTHFVLGRNR LQGLA AILKLWEK 
Sbjct: 376  VPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKS 435

Query: 1565 HIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTERE 1744
             +AKI +KWG+PNTDNEQMANELK LTGGVLLLRNKFLIILYRG DFLP  V  ++ ERE
Sbjct: 436  LVAKITVKWGIPNTDNEQMANELKHLTGGVLLLRNKFLIILYRGNDFLPCGVENLIVERE 495

Query: 1745 MILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQ 1924
              L  CQ  EE ARLKA ETF +  E    +  AGTLSEF +I  D G+LK    E ++Q
Sbjct: 496  RELQICQNHEEGARLKAIETFHLPHEPLEKTSKAGTLSEFQNIQSDFGDLKMGNREFELQ 555

Query: 1925 XXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCL 2104
                          QERKLFIL  KIEKSAK L +L +A +  EQDPD+E+I+EEER+CL
Sbjct: 556  LEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQCL 615

Query: 2105 REIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
             +IG+K +S+L+LGRRGV+DGVIEG+HQHWK+RE+ +VIT QK F+QV+
Sbjct: 616  HKIGMKMNSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQVI 664


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
            gi|557532797|gb|ESR43980.1| hypothetical protein
            CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score =  642 bits (1655), Expect = 0.0
 Identities = 353/662 (53%), Positives = 440/662 (66%), Gaps = 27/662 (4%)
 Frame = +2

Query: 347  KAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKI 526
            K PTAPWM  P++++P+EI++ +K +TKK F      +  D  LT K  G RGK AMKKI
Sbjct: 60   KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSF------KKTDKGLTAKESGVRGKQAMKKI 113

Query: 527  FKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEF 706
             + IEKLQ+   L+E +Q  +  KF+F        G +E +   +E              
Sbjct: 114  IENIEKLQKDQILDE-TQKKDMEKFEF-------RGCFEENGSDEE-------------- 151

Query: 707  DIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKW 886
                            PWLR+ER V RR+KKE++VT AE+ LDG L+ERL+DEA  +RKW
Sbjct: 152  ------DLRGGFGGKVPWLREERFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKW 205

Query: 887  VKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDF 1066
            VKVKKAGVT++VV ++   WR NELA++KFD+PLC+NMDRA+EI+E+KTGG+V+W  KD 
Sbjct: 206  VKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDA 265

Query: 1067 LAVYRGRIYESGSKHIRNIRRNSVGDRE---NSSSTMNYQNTTTFARVSSDGSSLDETIH 1237
              VYRG     GSK    +   S  D+E   + S+ ++ +     + + S+ ++LD+   
Sbjct: 266  HVVYRG----DGSKSSVKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRS 321

Query: 1238 GKDDKWESLQMA-----------SLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPEL 1384
             KD +  SL  +           SLYERE DRLLDGLGPRFVDWWM KPLPVDGDLLPE+
Sbjct: 322  LKDGEENSLPTSIFMDKNLRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEV 381

Query: 1385 VPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKC 1564
            VPGFK PFRL PP  RSKLTD ELTYLRKLA PLPTHFVLGRNR LQGLA AILKLWEK 
Sbjct: 382  VPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKS 441

Query: 1565 HIAKIALKWGVPNTDNEQMANELKS-------------LTGGVLLLRNKFLIILYRGKDF 1705
             +AKIA+KWG+PNTDNEQMANELK+             LTGGVLLLRNKFLIILYRGKDF
Sbjct: 442  LVAKIAVKWGIPNTDNEQMANELKNFKFSDDGVLLMQHLTGGVLLLRNKFLIILYRGKDF 501

Query: 1706 LPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDI 1885
            LP  V  ++ ERE  L  CQ  EE ARLKA ETF +  E    +  AGTLSEF +I  D 
Sbjct: 502  LPCGVENLIVERERELQICQNHEEGARLKAIETFHLPDEPLEKTSKAGTLSEFQNIQSDF 561

Query: 1886 GNLKKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDP 2065
            G+LK    E ++Q              QERKLFIL  KIEKSAK L +L +A +  EQDP
Sbjct: 562  GDLKMGNREFELQLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPREQDP 621

Query: 2066 DMEIISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQ 2245
            D+E+I+EEER+CL +IG+K +S+L+LGRRGV+DGVIEG+HQHWK+RE+ +VIT QK F+Q
Sbjct: 622  DLEMITEEERQCLHKIGMKINSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQKLFAQ 681

Query: 2246 VM 2251
            V+
Sbjct: 682  VI 683


>gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  636 bits (1640), Expect = e-179
 Identities = 369/742 (49%), Positives = 469/742 (63%), Gaps = 25/742 (3%)
 Frame = +2

Query: 101  MSASPFLTHFSNAITPFLYNPSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSA 280
            M A+ FLT  S       + PS    PF S NP        +S P  N      I  KS 
Sbjct: 1    MPATLFLTPLSTLPNITHHLPSHSNPPFHSYNPISS---ALNSKPPQNPKPTNPIPSKSP 57

Query: 281  KYETHDSYTKS------SESTPHSGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFT 442
               +  S T +      SE    + + IKAPTAPWM  PLL++P+E+++F+K R KK   
Sbjct: 58   NSLSLSSTTTTPNSKAPSEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHN 117

Query: 443  IGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDL 622
                 E PD  L GK+ G RG  A+K+I + IE+L      +E  +        F    +
Sbjct: 118  -NAKAEKPDTVLAGKLVGIRGDKAIKQIVQSIERLGPNQKTDETQKG-------FGEFRI 169

Query: 623  WGN--GVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXXPWLRDERMVIRRVK 796
            W +  G+ +++   + + + V+  +      +  A           PW RDER+V +R+K
Sbjct: 170  WDSLEGLGQNEKWDETHKDFVEFGIGGCLEGLGKAADSRFGGKM--PWERDERIVFQRIK 227

Query: 797  KEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKF 976
            K++V +AAE SL+  LLERLR EAA +RKWVKVKKAGVTQA+VD + FIW+ NELA++KF
Sbjct: 228  KKRVASAAELSLEKELLERLRAEAAKMRKWVKVKKAGVTQAIVDDIKFIWKTNELAMVKF 287

Query: 977  DIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENS 1156
            D+PLC+NM RAQEIVE KTGG+VVW  KD L +YRG  Y+S SK    +R  S  DR+ +
Sbjct: 288  DVPLCRNMHRAQEIVETKTGGMVVWGKKDTLVIYRGCNYQSSSKFFPKMRPCSA-DRQET 346

Query: 1157 SSTMNYQ---NTTTFARVSSDGSSLDETIHGKDDKWESLQMA--------------SLYE 1285
             S+ + Q      +  +  S  S +DE +  KD + + +Q                SLYE
Sbjct: 347  LSSDHMQPDLEENSSYQYKSFESPVDEKMSRKDAEEDCIQSGTFQETSMSCQPTSRSLYE 406

Query: 1286 READRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYL 1465
            +EADRLLDGLGPRF+DWWM KPLPVD DLLPE+VPGFK P R CPP TRSKLTD ELT+L
Sbjct: 407  KEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVPGFKAPIRRCPPHTRSKLTDDELTFL 466

Query: 1466 RKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLT 1645
            RK AR LPTHFVLGRNRKLQGLAAAILKLWEK  IAKIA+K+GVPNT+NEQMA EL++  
Sbjct: 467  RKFARSLPTHFVLGRNRKLQGLAAAILKLWEKSLIAKIAVKFGVPNTNNEQMAYELRA-- 524

Query: 1646 GGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITGEH 1825
              VL+LRNKF+I+LYRGKDFLP  VA +V +RE+ LTR QL EE AR KA ETF  +GE 
Sbjct: 525  -RVLILRNKFIILLYRGKDFLPCGVADLVAKREVELTRWQLYEEHARQKAIETFCESGEP 583

Query: 1826 FLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIE 2005
             +++   GTLSEF  I  + G L K+   V+++             +QERK FIL KKIE
Sbjct: 584  LVNT--VGTLSEFQDIQTEYGELIKENKNVEIKLEAEKEQLERELRNQERKFFILNKKIE 641

Query: 2006 KSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMH 2185
            KS   L KL +    +EQD D E+++EEE+ CLR +GLK  S LVLGRRGV++GV+EG+H
Sbjct: 642  KSTNELSKLNSQRTPAEQDVDQEMMTEEEKECLRTVGLKMHSCLVLGRRGVFNGVMEGLH 701

Query: 2186 QHWKHREIVKVITMQKKFSQVM 2251
            QHWKHRE+VKVITMQK F QVM
Sbjct: 702  QHWKHREVVKVITMQKLFRQVM 723


>gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  629 bits (1622), Expect = e-177
 Identities = 353/698 (50%), Positives = 461/698 (66%), Gaps = 19/698 (2%)
 Frame = +2

Query: 215  ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 394
            I FSS   N+  N +K  +++     +  ++ S +  P++G  IK PTAPWM  PLL++P
Sbjct: 49   IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 104

Query: 395  NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 574
            +E++  +K  +KK  +     + PD AL GK  G RGK  MKKI + +E LQ    LE+ 
Sbjct: 105  HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 161

Query: 575  SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 754
              T   ++ +F  G+      + SD EV+ +  ++                         
Sbjct: 162  --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 192

Query: 755  PWLRDE-RMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQ 931
            PWLR+E ++V RR+KKEK++T AE SLD  LLERLR +A  +RKW+KV K GVT+AVVD+
Sbjct: 193  PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 252

Query: 932  VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1111
            +   WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW  KD L VYRG  +   SK 
Sbjct: 253  IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 311

Query: 1112 IRNIRRNSVGD-RENSSSTMNYQNTTTFARVSSD---GSSLDETIHGKDDKWESLQM--- 1270
            I +++     D +E SSST ++  ++    +S +   GS+L   ++ +D + ES+ +   
Sbjct: 312  ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIF 371

Query: 1271 -----------ASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLC 1417
                        SLYERE DRLLDGLGPRF+DWWM+KPLP+D DLLPE VPGF+ P RL 
Sbjct: 372  MKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLS 431

Query: 1418 PPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGV 1597
            PP TR  LTD EL YLRKL  PLP HF LG+NR LQGLAAAILKLWEK  IAKIA+KWG+
Sbjct: 432  PPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGI 491

Query: 1598 PNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEE 1777
             NTDNEQMA ELK+LTGGVLL+RNKFL+ILYRGKDFLP  VA +V EREM L RCQL EE
Sbjct: 492  QNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEE 551

Query: 1778 AARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXX 1957
             AR+K +ET  +  E    +   GTLSEF  I    G+LKK+ +E+++Q           
Sbjct: 552  GARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERE 611

Query: 1958 XXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSL 2137
              +QERKL IL  KIEKSAK L KLK++ + +EQD D+EII+EEER CLR+IGLK +S L
Sbjct: 612  LRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFL 671

Query: 2138 VLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            VLGRRGV++GVIEG++QHWKHRE+VKVITMQ+ F++V+
Sbjct: 672  VLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 709


>gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  629 bits (1622), Expect = e-177
 Identities = 353/698 (50%), Positives = 461/698 (66%), Gaps = 19/698 (2%)
 Frame = +2

Query: 215  ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 394
            I FSS   N+  N +K  +++     +  ++ S +  P++G  IK PTAPWM  PLL++P
Sbjct: 23   IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 78

Query: 395  NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 574
            +E++  +K  +KK  +     + PD AL GK  G RGK  MKKI + +E LQ    LE+ 
Sbjct: 79   HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 135

Query: 575  SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 754
              T   ++ +F  G+      + SD EV+ +  ++                         
Sbjct: 136  --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 166

Query: 755  PWLRDE-RMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQ 931
            PWLR+E ++V RR+KKEK++T AE SLD  LLERLR +A  +RKW+KV K GVT+AVVD+
Sbjct: 167  PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 226

Query: 932  VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1111
            +   WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW  KD L VYRG  +   SK 
Sbjct: 227  IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 285

Query: 1112 IRNIRRNSVGD-RENSSSTMNYQNTTTFARVSSD---GSSLDETIHGKDDKWESLQM--- 1270
            I +++     D +E SSST ++  ++    +S +   GS+L   ++ +D + ES+ +   
Sbjct: 286  ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIF 345

Query: 1271 -----------ASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLC 1417
                        SLYERE DRLLDGLGPRF+DWWM+KPLP+D DLLPE VPGF+ P RL 
Sbjct: 346  MKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLS 405

Query: 1418 PPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGV 1597
            PP TR  LTD EL YLRKL  PLP HF LG+NR LQGLAAAILKLWEK  IAKIA+KWG+
Sbjct: 406  PPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGI 465

Query: 1598 PNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEE 1777
             NTDNEQMA ELK+LTGGVLL+RNKFL+ILYRGKDFLP  VA +V EREM L RCQL EE
Sbjct: 466  QNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEE 525

Query: 1778 AARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXX 1957
             AR+K +ET  +  E    +   GTLSEF  I    G+LKK+ +E+++Q           
Sbjct: 526  GARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERE 585

Query: 1958 XXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSL 2137
              +QERKL IL  KIEKSAK L KLK++ + +EQD D+EII+EEER CLR+IGLK +S L
Sbjct: 586  LRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFL 645

Query: 2138 VLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            VLGRRGV++GVIEG++QHWKHRE+VKVITMQ+ F++V+
Sbjct: 646  VLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 683


>gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  629 bits (1622), Expect = e-177
 Identities = 353/698 (50%), Positives = 461/698 (66%), Gaps = 19/698 (2%)
 Frame = +2

Query: 215  ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 394
            I FSS   N+  N +K  +++     +  ++ S +  P++G  IK PTAPWM  PLL++P
Sbjct: 23   IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 78

Query: 395  NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 574
            +E++  +K  +KK  +     + PD AL GK  G RGK  MKKI + +E LQ    LE+ 
Sbjct: 79   HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 135

Query: 575  SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 754
              T   ++ +F  G+      + SD EV+ +  ++                         
Sbjct: 136  --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 166

Query: 755  PWLRDE-RMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQ 931
            PWLR+E ++V RR+KKEK++T AE SLD  LLERLR +A  +RKW+KV K GVT+AVVD+
Sbjct: 167  PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 226

Query: 932  VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1111
            +   WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW  KD L VYRG  +   SK 
Sbjct: 227  IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 285

Query: 1112 IRNIRRNSVGD-RENSSSTMNYQNTTTFARVSSD---GSSLDETIHGKDDKWESLQM--- 1270
            I +++     D +E SSST ++  ++    +S +   GS+L   ++ +D + ES+ +   
Sbjct: 286  ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIF 345

Query: 1271 -----------ASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLC 1417
                        SLYERE DRLLDGLGPRF+DWWM+KPLP+D DLLPE VPGF+ P RL 
Sbjct: 346  MKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLS 405

Query: 1418 PPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGV 1597
            PP TR  LTD EL YLRKL  PLP HF LG+NR LQGLAAAILKLWEK  IAKIA+KWG+
Sbjct: 406  PPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGI 465

Query: 1598 PNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEE 1777
             NTDNEQMA ELK+LTGGVLL+RNKFL+ILYRGKDFLP  VA +V EREM L RCQL EE
Sbjct: 466  QNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEE 525

Query: 1778 AARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXX 1957
             AR+K +ET  +  E    +   GTLSEF  I    G+LKK+ +E+++Q           
Sbjct: 526  GARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERE 585

Query: 1958 XXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSL 2137
              +QERKL IL  KIEKSAK L KLK++ + +EQD D+EII+EEER CLR+IGLK +S L
Sbjct: 586  LRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFL 645

Query: 2138 VLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            VLGRRGV++GVIEG++QHWKHRE+VKVITMQ+ F++V+
Sbjct: 646  VLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 683


>gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  629 bits (1622), Expect = e-177
 Identities = 353/698 (50%), Positives = 461/698 (66%), Gaps = 19/698 (2%)
 Frame = +2

Query: 215  ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 394
            I FSS   N+  N +K  +++     +  ++ S +  P++G  IK PTAPWM  PLL++P
Sbjct: 49   IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 104

Query: 395  NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 574
            +E++  +K  +KK  +     + PD AL GK  G RGK  MKKI + +E LQ    LE+ 
Sbjct: 105  HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 161

Query: 575  SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 754
              T   ++ +F  G+      + SD EV+ +  ++                         
Sbjct: 162  --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 192

Query: 755  PWLRDE-RMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQ 931
            PWLR+E ++V RR+KKEK++T AE SLD  LLERLR +A  +RKW+KV K GVT+AVVD+
Sbjct: 193  PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 252

Query: 932  VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1111
            +   WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW  KD L VYRG  +   SK 
Sbjct: 253  IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 311

Query: 1112 IRNIRRNSVGD-RENSSSTMNYQNTTTFARVSSD---GSSLDETIHGKDDKWESLQM--- 1270
            I +++     D +E SSST ++  ++    +S +   GS+L   ++ +D + ES+ +   
Sbjct: 312  ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIF 371

Query: 1271 -----------ASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLC 1417
                        SLYERE DRLLDGLGPRF+DWWM+KPLP+D DLLPE VPGF+ P RL 
Sbjct: 372  MKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLS 431

Query: 1418 PPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGV 1597
            PP TR  LTD EL YLRKL  PLP HF LG+NR LQGLAAAILKLWEK  IAKIA+KWG+
Sbjct: 432  PPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGI 491

Query: 1598 PNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEE 1777
             NTDNEQMA ELK+LTGGVLL+RNKFL+ILYRGKDFLP  VA +V EREM L RCQL EE
Sbjct: 492  QNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEE 551

Query: 1778 AARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXX 1957
             AR+K +ET  +  E    +   GTLSEF  I    G+LKK+ +E+++Q           
Sbjct: 552  GARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERE 611

Query: 1958 XXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSL 2137
              +QERKL IL  KIEKSAK L KLK++ + +EQD D+EII+EEER CLR+IGLK +S L
Sbjct: 612  LRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFL 671

Query: 2138 VLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            VLGRRGV++GVIEG++QHWKHRE+VKVITMQ+ F++V+
Sbjct: 672  VLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 709


>gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  629 bits (1622), Expect = e-177
 Identities = 353/698 (50%), Positives = 461/698 (66%), Gaps = 19/698 (2%)
 Frame = +2

Query: 215  ITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSKPLLVKP 394
            I FSS   N+  N +K  +++     +  ++ S +  P++G  IK PTAPWM  PLL++P
Sbjct: 49   IPFSSS-LNSSQNPSKTHKENRSLNNNSKFSVSKD--PNNGP-IKMPTAPWMKGPLLLQP 104

Query: 395  NEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI 574
            +E++  +K  +KK  +     + PD AL GK  G RGK  MKKI + +E LQ    LE+ 
Sbjct: 105  HEVLNPSKSTSKK--SSNSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLED- 161

Query: 575  SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXX 754
              T   ++ +F  G+      + SD EV+ +  ++                         
Sbjct: 162  --TQIGIREEFEVGNWLEE--FGSDGEVKRFDGKM------------------------- 192

Query: 755  PWLRDE-RMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQ 931
            PWLR+E ++V RR+KKEK++T AE SLD  LLERLR +A  +RKW+KV K GVT+AVVD+
Sbjct: 193  PWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDE 252

Query: 932  VHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKH 1111
            +   WR NEL ++KF +PLC+NMDRA+EI+EMKT G+VVW  KD L VYRG  +   SK 
Sbjct: 253  IKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK- 311

Query: 1112 IRNIRRNSVGD-RENSSSTMNYQNTTTFARVSSD---GSSLDETIHGKDDKWESLQM--- 1270
            I +++     D +E SSST ++  ++    +S +   GS+L   ++ +D + ES+ +   
Sbjct: 312  ISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINIF 371

Query: 1271 -----------ASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLC 1417
                        SLYERE DRLLDGLGPRF+DWWM+KPLP+D DLLPE VPGF+ P RL 
Sbjct: 372  MKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLS 431

Query: 1418 PPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGV 1597
            PP TR  LTD EL YLRKL  PLP HF LG+NR LQGLAAAILKLWEK  IAKIA+KWG+
Sbjct: 432  PPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGI 491

Query: 1598 PNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEE 1777
             NTDNEQMA ELK+LTGGVLL+RNKFL+ILYRGKDFLP  VA +V EREM L RCQL EE
Sbjct: 492  QNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEE 551

Query: 1778 AARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXX 1957
             AR+K +ET  +  E    +   GTLSEF  I    G+LKK+ +E+++Q           
Sbjct: 552  GARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERE 611

Query: 1958 XXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSL 2137
              +QERKL IL  KIEKSAK L KLK++ + +EQD D+EII+EEER CLR+IGLK +S L
Sbjct: 612  LRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFL 671

Query: 2138 VLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            VLGRRGV++GVIEG++QHWKHRE+VKVITMQ+ F++V+
Sbjct: 672  VLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVI 709


>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  615 bits (1587), Expect = e-173
 Identities = 354/719 (49%), Positives = 444/719 (61%), Gaps = 21/719 (2%)
 Frame = +2

Query: 158  NPSKIP-TPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHS 334
            +PS  P T  LSSN        F  P  +     + +  K   Y  H S  ++ +S P  
Sbjct: 8    SPSTFPNTHHLSSN--------FKRPSDSYILISSSLNPKPTNYHHHASTKENPDSKPPL 59

Query: 335  GSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVA 514
               IK PT PWM  PL+++P+E+ + +K      F+     E     LT K+ G RGK  
Sbjct: 60   -EPIKMPTPPWMKGPLVLQPHEVTDLSKPENDNKFS-NRKAEKSVNGLTDKLVGRRGKNV 117

Query: 515  MKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGD-LWGNGVYESDAEVQEYSEEVQLSL 691
            +KKI + IE+L     ++   +T ++   K   GD L G G   S  E            
Sbjct: 118  IKKIARRIEELGRKSKVDS-EETQKDFVGKNGIGDCLEGLGESRSGGE------------ 164

Query: 692  ESTEFDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAA 871
                                 PW +DE  V RR+KKEK+V++AE  L+  LLERLR EA 
Sbjct: 165  -------------------RMPWEKDEGFVFRRMKKEKIVSSAELRLERELLERLRSEAR 205

Query: 872  MIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVW 1051
             +RKWVKVKKAGVT+ VV+ V F+W++NELA++KFD+PLC+NMDRAQEI+EMKTGG+VVW
Sbjct: 206  KMRKWVKVKKAGVTKEVVEDVKFVWKSNELAMVKFDVPLCRNMDRAQEILEMKTGGLVVW 265

Query: 1052 RNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTM---NYQNTTTFARVSSDGSSL 1222
            R KD   +YRG  Y+  SK          G +E   S +   + +   + + V S  +++
Sbjct: 266  RRKDAQVIYRGCNYQPTSKTFPRTYAGFSGHQETPFSNLVQLDSRKGNSVSEVKSYENTI 325

Query: 1223 DETIHGKDDKWESLQMA-------------SLYEREADRLLDGLGPRFVDWWMQKPLPVD 1363
            +  I  K+ + E++  A             SLY READRLLDGLGPRF+DWWM KPLPVD
Sbjct: 326  ERKISKKNTEGETIPTAIILKNDANFQPSSSLYVREADRLLDGLGPRFIDWWMNKPLPVD 385

Query: 1364 GDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAI 1543
             DLLPE+VPGF+ PFR CPP TRSKLTD ELTYLRKLA  LPTHFVLGRNRKLQGLAAAI
Sbjct: 386  ADLLPEVVPGFRPPFRRCPPHTRSKLTDEELTYLRKLAHSLPTHFVLGRNRKLQGLAAAI 445

Query: 1544 LKLWEKCHIAKIALKWGVPNTDNEQMANELKS---LTGGVLLLRNKFLIILYRGKDFLPS 1714
            LKLWEKCHIAKIA+K GVPNT+NEQMA ELK+   LTGG LLLRNKF+IILYRGKDFLP 
Sbjct: 446  LKLWEKCHIAKIAVKLGVPNTNNEQMAYELKARICLTGGDLLLRNKFIIILYRGKDFLPD 505

Query: 1715 EVAKVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNL 1894
            ++A+++T+RE  L  CQL EE ARL  +E   +  E    +  AGTLSEFH I ++ G+ 
Sbjct: 506  QIAELITKRETELEYCQLYEEHARLVVAEKVFVADEPLKKTSPAGTLSEFHDIQIEYGDS 565

Query: 1895 KKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDME 2074
             K   EV +               QERKL IL  KI+KS K L KL  A + SE+D D E
Sbjct: 566  NKGNIEVKLPFEAEKERLESELRKQERKLLILNSKIKKSTKELLKLNTAWKPSERDGDQE 625

Query: 2075 IISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            +++EEER C R+IGLK  S LVLGRRG++DGVIEG+ QHWKHRE+ KVITMQ+ F QVM
Sbjct: 626  MLTEEERECFRKIGLKMRSVLVLGRRGIFDGVIEGLRQHWKHREVAKVITMQRYFWQVM 684


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  614 bits (1584), Expect = e-173
 Identities = 355/701 (50%), Positives = 443/701 (63%), Gaps = 4/701 (0%)
 Frame = +2

Query: 161  PSKIPTPFLSSNPSKYNFITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGS 340
            PS +   F S NP     I  S  P+ N+S+    +        +  +T  S     S +
Sbjct: 2    PSALFLQFFSYNP-----IASSLNPATNKSSLNNAQNPKFATNKNTEFTLLSVPNSQSNA 56

Query: 341  TIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMK 520
             IK PTAPWM  PLL++P+E++  +K R K       N E  D  LTGK  G RGK AM+
Sbjct: 57   PIKVPTAPWMKGPLLLQPHELINLSKPRNKNSSN-NANIEKSDKVLTGKESGVRGKKAME 115

Query: 521  KIFKGIEKLQETHDLEEI---SQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSL 691
            KI K IE+LQE   LE+    SQ  E  +                D+E  E  E++ L  
Sbjct: 116  KIVKSIEQLQENQALEKTQCDSQAYEKTQL---------------DSEAFEIGEKLGLIR 160

Query: 692  ESTEFDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAA 871
            E  +F +              PW R+E+ V  R+KKEK VT AE  L+  LLE LR EA+
Sbjct: 161  EHGDFGV---------NKKLKPWEREEKFVYWRIKKEKAVTKAELILEKELLEILRTEAS 211

Query: 872  MIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVW 1051
             +RKWVKV KAGVTQ+VVDQ+ + WRNNELA++KFD+PLC+NMDRA+EIVE+KTGG+VVW
Sbjct: 212  KMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVW 271

Query: 1052 RNKDFLAVYRGRIYE-SGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFARVSSDGSSLDE 1228
              KD L +YRG  Y  + S H+  +    +G ++       Y  T+ F  +  D ++   
Sbjct: 272  TRKDSLVIYRGCNYHLTKSSHVSTMDEK-IGSKDGEEE---YIPTSIF--IGDDANT--P 323

Query: 1229 TIHGKDDKWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPF 1408
            TI+G           SL+ERE DRLLDGLGPRFVDWWM+KPLPVD DLLPE+V GF  P 
Sbjct: 324  TING-----------SLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPS 372

Query: 1409 RLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALK 1588
            R    + R+KL D ELTYLRKLA  LPTHFVLGRNR+LQGLAAAILKLWE+  IAKIA+K
Sbjct: 373  RF--HYARAKLKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVK 430

Query: 1589 WGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQL 1768
            WG+PNTDNEQMANELK LTGGVLLLRNKF IIL+RGKDFLP +VA +V +RE  L  CQL
Sbjct: 431  WGIPNTDNEQMANELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQL 490

Query: 1769 QEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXX 1948
             EE ARLKA ET     E  + +   GTL+EF  I +    L K   +  +Q        
Sbjct: 491  NEEGARLKAIETSFTDDELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKL 550

Query: 1949 XXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSD 2128
                  QE KL ILK KIEKSA+ L KL +A   ++QD D+E+++EEER CLR+IGLK  
Sbjct: 551  ERELRIQEHKLLILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMR 610

Query: 2129 SSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            SSL+LGRRGV+DGVIEG+HQHWKHRE+VKVI++Q+ F+QV+
Sbjct: 611  SSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVI 651


>gb|EPS58217.1| hypothetical protein M569_16596, partial [Genlisea aurea]
          Length = 668

 Score =  602 bits (1552), Expect = e-169
 Identities = 337/653 (51%), Positives = 433/653 (66%), Gaps = 13/653 (1%)
 Frame = +2

Query: 332  SGSTIKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKV 511
            S  ++ APTAPWM KPL V P+++++  K   KK+     N +  D  L+ KVG  R K+
Sbjct: 1    SSESVSAPTAPWMRKPLFVNPSQLLDLRKSPIKKN---SFNKQRLDKDLSEKVGNGRNKL 57

Query: 512  AMKKIFKGIEKLQETHDLEEISQT---PENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQ 682
            AM++IF+GI+KLQE+    E + T   P+N +FKF PG+L GN     +   +  SE   
Sbjct: 58   AMRQIFRGIKKLQESRPSSEAAATEGSPKNFEFKFRPGELSGNPQDSKNDGCERNSETTD 117

Query: 683  LSLESTEFDIPL--AXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAE-SSLDGILLER 853
                   F IPL  A           PW R+   V R      ++ AA+ +++D +LLER
Sbjct: 118  ------GFCIPLREAAEGEEVRLKAMPWQREA--VGRMATNRPLMKAAKLNAIDELLLER 169

Query: 854  LRDEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNN--ELALLKFDIPLCQNMDRAQEIVEM 1027
            L++EAA +RKW+KVKK GVT  VVDQVH  WR++  +LALLKFD+PL + M RA+EIVEM
Sbjct: 170  LQNEAAKMRKWIKVKKLGVTPTVVDQVHSTWRSSRSQLALLKFDVPLNRCMSRAREIVEM 229

Query: 1028 KTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFARVSS 1207
            KTGG+ +W++KD +AVYRG                       S S+   Q++ +F+    
Sbjct: 230  KTGGIAIWKSKDLIAVYRG-----------------------SESSNAQQSSASFS---- 262

Query: 1208 DGSSLDETIHGKDDKWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELV 1387
                                  SLYERE DRLLD LGPRFVDWW+ KPLPVD DLLP++V
Sbjct: 263  ----------------------SLYERETDRLLDELGPRFVDWWLHKPLPVDADLLPQVV 300

Query: 1388 PGFKTPFRLCPP-FTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKC 1564
            PGFK P RLCPP FTR +L D ELTYLRKLARPLPTHFVLGRN KLQGLAAAILKLWEKC
Sbjct: 301  PGFKPPPRLCPPPFTRPQLFDDELTYLRKLARPLPTHFVLGRNNKLQGLAAAILKLWEKC 360

Query: 1565 HIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTERE 1744
            HIAKIALKWGV NTDNE MA+ELK LTGGVL+LRNK+LI+LYRGKDFLP +VAK V ER 
Sbjct: 361  HIAKIALKWGVQNTDNELMADELKRLTGGVLILRNKYLILLYRGKDFLPRKVAKAVAERN 420

Query: 1745 MILTRCQLQEEAARLKASETFSITGEHFLDSGVA----GTLSEFHSIHLDIGNLKKDKAE 1912
            ++L+  Q  EEAAR+KASE F I  E   DS  A    GTL+EFH I  +  ++   +AE
Sbjct: 421  ILLSTSQQLEEAARIKASEPFLIAEEEEEDSCSASLGGGTLAEFHDICTERSSMTMTEAE 480

Query: 1913 VDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEE 2092
            +  +             +Q++ L  LK+KIE+S++VL+K+K+ + +SE DPD+E++S EE
Sbjct: 481  LKKE------RLEKELENQQKSLSNLKRKIERSSRVLKKIKSEATYSEPDPDVEVLSNEE 534

Query: 2093 RRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
             R LR +G+++D++L+LGRRGVYDGVIEGMHQHWKHREIVKV+TMQ+K+SQ+M
Sbjct: 535  LRSLRNLGMRNDNTLLLGRRGVYDGVIEGMHQHWKHREIVKVVTMQRKYSQIM 587


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  591 bits (1524), Expect = e-166
 Identities = 343/701 (48%), Positives = 438/701 (62%), Gaps = 11/701 (1%)
 Frame = +2

Query: 182  FLSSNPSKYN------FITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGST 343
            FLS +PS +        I+ S PP++N  NG            H+    S    P     
Sbjct: 3    FLSFHPSLFPNSYSRFHISSSLPPNSN--NG------------HNHQHTSPSQVP----- 43

Query: 344  IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKK 523
            IK+PT PWM  PLL++P+E+++ +  ++KK     E  E  D AL GK    RGK AMKK
Sbjct: 44   IKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKP--EKHELSDKALMGKE--VRGKRAMKK 99

Query: 524  IFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTE 703
            I   +EKL +T +  E      N++           G Y    E+ + +EEV+       
Sbjct: 100  IVDRVEKLHKTQNSNETRVDSLNVE---------NFGGY---LEILKENEEVRSK----- 142

Query: 704  FDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRK 883
                             PW +DE+    +VK+EK VTAAE +LD  LL RLR+EAA +R 
Sbjct: 143  --------------GRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRT 188

Query: 884  WVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKD 1063
            W+KVKKAGVTQ VVDQ+   WR NELA++KFDIPLC+NMDRA+EIVE KTGG+VV   KD
Sbjct: 189  WIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKD 248

Query: 1064 FLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN-----YQNTTTFARVSSDGSSLDE 1228
            FL VYRG  ++  +K   ++R N         +T         N ++   ++ +    D 
Sbjct: 249  FLVVYRGCNHQLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDS 308

Query: 1229 TIHGKDDKWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPF 1408
               G  D    L   SLYERE +RLLDGLGPRF+DWWM KPLPVD DLLPE VPGF+ PF
Sbjct: 309  ISTGIQDVNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPF 368

Query: 1409 RLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALK 1588
            RLCPP + +KLTD ELTY RKLA+ LPTHFVLGRN+ L+GLA+AILKLWEK  IAKIA+K
Sbjct: 369  RLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIK 428

Query: 1589 WGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQL 1768
            +G+PNTDNE MANELK LTGGVLLLRNKF I+LYRG DFLP  VA +V +RE+ L   QL
Sbjct: 429  YGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQL 488

Query: 1769 QEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXX 1948
             EE AR+KA + FS   E  LD+  +GTL+EF  I   + + K    + ++Q        
Sbjct: 489  HEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRL 548

Query: 1949 XXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSD 2128
                 +++R+ FIL KKI++S + L KL  A   SEQD D+EI+++EER C R+IGLK  
Sbjct: 549  EKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQ 608

Query: 2129 SSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            SSL+LGRRG++DGV+EG+HQHWKHRE+VKVITMQK FSQV+
Sbjct: 609  SSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVI 649


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Glycine max]
            gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Glycine max]
            gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  591 bits (1524), Expect = e-166
 Identities = 343/701 (48%), Positives = 438/701 (62%), Gaps = 11/701 (1%)
 Frame = +2

Query: 182  FLSSNPSKYN------FITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGST 343
            FLS +PS +        I+ S PP++N  NG            H+    S    P     
Sbjct: 3    FLSFHPSLFPNSYSRFHISSSLPPNSN--NG------------HNHQHTSPSQVP----- 43

Query: 344  IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKK 523
            IK+PT PWM  PLL++P+E+++ +  ++KK     E  E  D AL GK    RGK AMKK
Sbjct: 44   IKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKP--EKHELSDKALMGKE--VRGKRAMKK 99

Query: 524  IFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTE 703
            I   +EKL +T +  E      N++           G Y    E+ + +EEV+       
Sbjct: 100  IVDRVEKLHKTQNSNETRVDSLNVE---------NFGGY---LEILKENEEVRSK----- 142

Query: 704  FDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRK 883
                             PW +DE+    +VK+EK VTAAE +LD  LL RLR+EAA +R 
Sbjct: 143  --------------GRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRT 188

Query: 884  WVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKD 1063
            W+KVKKAGVTQ VVDQ+   WR NELA++KFDIPLC+NMDRA+EIVE KTGG+VV   KD
Sbjct: 189  WIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKD 248

Query: 1064 FLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN-----YQNTTTFARVSSDGSSLDE 1228
            FL VYRG  ++  +K   ++R N         +T         N ++   ++ +    D 
Sbjct: 249  FLVVYRGCNHQLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDS 308

Query: 1229 TIHGKDDKWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPF 1408
               G  D    L   SLYERE +RLLDGLGPRF+DWWM KPLPVD DLLPE VPGF+ PF
Sbjct: 309  ISTGIQDVNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPF 368

Query: 1409 RLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALK 1588
            RLCPP + +KLTD ELTY RKLA+ LPTHFVLGRN+ L+GLA+AILKLWEK  IAKIA+K
Sbjct: 369  RLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIK 428

Query: 1589 WGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQL 1768
            +G+PNTDNE MANELK LTGGVLLLRNKF I+LYRG DFLP  VA +V +RE+ L   QL
Sbjct: 429  YGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQL 488

Query: 1769 QEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXX 1948
             EE AR+KA + FS   E  LD+  +GTL+EF  I   + + K    + ++Q        
Sbjct: 489  HEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRL 548

Query: 1949 XXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSD 2128
                 +++R+ FIL KKI++S + L KL  A   SEQD D+EI+++EER C R+IGLK  
Sbjct: 549  EKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQ 608

Query: 2129 SSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            SSL+LGRRG++DGV+EG+HQHWKHRE+VKVITMQK FSQV+
Sbjct: 609  SSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVI 649


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  591 bits (1524), Expect = e-166
 Identities = 343/701 (48%), Positives = 438/701 (62%), Gaps = 11/701 (1%)
 Frame = +2

Query: 182  FLSSNPSKYN------FITFSSPPSNNRSNGTKIERKSAKYETHDSYTKSSESTPHSGST 343
            FLS +PS +        I+ S PP++N  NG            H+    S    P     
Sbjct: 3    FLSFHPSLFPNSYSRFHISSSLPPNSN--NG------------HNHQHTSPSQVP----- 43

Query: 344  IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKK 523
            IK+PT PWM  PLL++P+E+++ +  ++KK     E  E  D AL GK    RGK AMKK
Sbjct: 44   IKSPTPPWMKVPLLLQPHELVDLSNPKSKKFKP--EKHELSDKALMGKE--VRGKRAMKK 99

Query: 524  IFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTE 703
            I   +EKL +T +  E      N++           G Y    E+ + +EEV+       
Sbjct: 100  IVDRVEKLHKTQNSNETRVDSLNVE---------NFGGY---LEILKENEEVRSK----- 142

Query: 704  FDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRK 883
                             PW +DE+    +VK+EK VTAAE +LD  LL RLR+EAA +R 
Sbjct: 143  --------------GRMPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRT 188

Query: 884  WVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKD 1063
            W+KVKKAGVTQ VVDQ+   WR NELA++KFDIPLC+NMDRA+EIVE KTGG+VV   KD
Sbjct: 189  WIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKD 248

Query: 1064 FLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN-----YQNTTTFARVSSDGSSLDE 1228
            FL VYRG  ++  +K   ++R N         +T         N ++   ++ +    D 
Sbjct: 249  FLVVYRGCNHQLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDS 308

Query: 1229 TIHGKDDKWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPF 1408
               G  D    L   SLYERE +RLLDGLGPRF+DWWM KPLPVD DLLPE VPGF+ PF
Sbjct: 309  ISTGIQDVNCQLVNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPF 368

Query: 1409 RLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALK 1588
            RLCPP + +KLTD ELTY RKLA+ LPTHFVLGRN+ L+GLA+AILKLWEK  IAKIA+K
Sbjct: 369  RLCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIK 428

Query: 1589 WGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQL 1768
            +G+PNTDNE MANELK LTGGVLLLRNKF I+LYRG DFLP  VA +V +RE+ L   QL
Sbjct: 429  YGIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQL 488

Query: 1769 QEEAARLKASETFSITGEHFLDSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXX 1948
             EE AR+KA + FS   E  LD+  +GTL+EF  I   + + K    + ++Q        
Sbjct: 489  HEEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRL 548

Query: 1949 XXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSD 2128
                 +++R+ FIL KKI++S + L KL  A   SEQD D+EI+++EER C R+IGLK  
Sbjct: 549  EKELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQ 608

Query: 2129 SSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            SSL+LGRRG++DGV+EG+HQHWKHRE+VKVITMQK FSQV+
Sbjct: 609  SSLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVI 649


>gb|ESW11169.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score =  571 bits (1471), Expect = e-160
 Identities = 328/666 (49%), Positives = 421/666 (63%), Gaps = 19/666 (2%)
 Frame = +2

Query: 311  SSESTPHSGST-----IKAPTAPWMSKPLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMA 475
            SS   P+S +T     IK PT PWM  PLL++PNE+++ +  ++KK F + E  E  D  
Sbjct: 24   SSSMLPNSNNTPSQLPIKGPTPPWMKGPLLLQPNELLDLSNPKSKK-FKL-ERQELSDKD 81

Query: 476  LTGKVGGARGKVAMKKIFKGIEKLQETHDLEEI---SQTPENLKFKFAPGDLWGNGVYES 646
            L GK   ARGK  MKKI + +EKL  TH+       S   EN+            GV +S
Sbjct: 82   LMGKE--ARGKKTMKKIVEKVEKLHGTHNSAGALIGSPNVENI-----------GGVLDS 128

Query: 647  DAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXXPWLRDERMVIRRVKKEKVVTAAES 826
              E    +EEV+ +                      PW  D + V  ++K+++ VTAAE 
Sbjct: 129  LKE----NEEVRRT------------------KGRMPWENDWKFVYEKIKRKRTVTAAEL 166

Query: 827  SLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDR 1006
            +LD +L  RLR+EAA +R W+KVKKAGVTQ VVDQ+ + WR NELA++KFDIPLC+NM R
Sbjct: 167  TLDKVLFRRLRNEAATMRTWIKVKKAGVTQDVVDQIKWTWRRNELAMVKFDIPLCRNMSR 226

Query: 1007 AQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTT 1186
            A+EIVE KTGG+VV   KDFL VY G  ++  +    ++R N      +  S      T 
Sbjct: 227  AREIVETKTGGLVVLSKKDFLVVYHGGNHQLTTTGYPSLRTN-----HSEMSGAELATTG 281

Query: 1187 TFARVSSDGSSLDETIHGKDDKWESLQMA-----------SLYEREADRLLDGLGPRFVD 1333
                V S+  SL E ++   +  +S+  +           SLYERE DRLLD LGPRF+D
Sbjct: 282  DICSVDSN-HSLSEMLNFIAEDKDSIATSEQNMNFQTANGSLYERETDRLLDDLGPRFID 340

Query: 1334 WWMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRN 1513
            WWM KPLPVD DLLPE VPGF+ P R+CPP + +KL+D ELTY RKLA+ LPTHFVLGRN
Sbjct: 341  WWMAKPLPVDADLLPEDVPGFQPPLRICPPHSCAKLSDYELTYFRKLAQLLPTHFVLGRN 400

Query: 1514 RKLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYR 1693
            ++L+GLAAAILKLWEK  IAKI++K+G+PNTDNE MANELK LTGGVLLLRNKF IILYR
Sbjct: 401  KRLKGLAAAILKLWEKSLIAKISIKYGIPNTDNEMMANELKYLTGGVLLLRNKFYIILYR 460

Query: 1694 GKDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSGVAGTLSEFHSI 1873
            G DFLP  VA +V  RE+ L   +L EE AR+KA E  S   E   D+  +GTL+EF  I
Sbjct: 461  GNDFLPKRVATLVENRELELKSFELHEEVARMKALEALSPIDEVPQDTSTSGTLTEFKEI 520

Query: 1874 HLDIGNLKKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFS 2053
                 + KK   E+++Q             +++ +  IL KK+EKS K L KL  A   S
Sbjct: 521  QTKFEDAKKGDIELNLQLEAEICRLEKELKEEQHRALILNKKMEKSGKELSKLNAAWTPS 580

Query: 2054 EQDPDMEIISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQK 2233
            EQD D+E++++EER C R+IGLK  S L+LGRRG++DGV+EG+HQHWKHRE+VKVITMQK
Sbjct: 581  EQDTDLEMMTDEERECFRKIGLKMQSFLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQK 640

Query: 2234 KFSQVM 2251
             FSQV+
Sbjct: 641  LFSQVI 646


>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 764

 Score =  561 bits (1446), Expect = e-157
 Identities = 327/701 (46%), Positives = 428/701 (61%), Gaps = 19/701 (2%)
 Frame = +2

Query: 206  YNFITFSSPPS---NNRSNGTKIERKSAKYETHDSYTKSSESTPHSGSTIKAPTAPWMSK 376
            Y++I  SS  S   N ++N      K      +++    S S  H  S IK+PT PW+  
Sbjct: 10   YSYIHISSSSSFSPNPKNNNNLNHHKPLSIPNNNN----SHSHDHI-SIIKSPTPPWIKS 64

Query: 377  PLLVKPNEIMEFTKRRTKKDFTIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQET 556
            PL ++P + +       K D +        D AL  K     GK  ++KI   +EKL + 
Sbjct: 65   PLHLQPQQHL-LNSNVEKSDLS--------DKALNSKE--ISGKKVLRKIAHKVEKLHKA 113

Query: 557  HDLEEISQTPENLKFKFAPGDLWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXX 736
             D E+ ++T   +                   +V+ + + + + +E+ E           
Sbjct: 114  LDSEK-NETLTQM----------------GSEKVENFGDCLDILMENEEV---------- 146

Query: 737  XXXXXXPWLRDERMVIRRVKKEKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQ 916
                  PW +DE++   +VK+EK  +AA+ ++D ++L RLR EAA +RKWVKVKK GVTQ
Sbjct: 147  VNKGRMPWEKDEKIGFFKVKREKTFSAADLNVDKVVLHRLRGEAARMRKWVKVKKIGVTQ 206

Query: 917  AVVDQVHFIWRNNELALLKFDIPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYE 1096
             VVD++   WR NELA++KFDIPLCQNM RA+EIVE KTGG+V+W  KD L VYRG  Y+
Sbjct: 207  DVVDEIKRSWRMNELAMVKFDIPLCQNMGRAREIVETKTGGLVIWCKKDTLVVYRGCNYQ 266

Query: 1097 SGSKHIRNIRRNSVGDRENSSSTMNYQNTTT---FARVSSDGSSLDETIHGKDDKWESL- 1264
              SK    I    +  ++ +S   N   + T    +RV S  SS  E +    +  +SL 
Sbjct: 267  LTSKSSPKIHTGYIRSQKTNSYETNEVKSATKGDLSRVESTQSS-SEILSSNAEHKDSLS 325

Query: 1265 ----------QMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRL 1414
                      +  SLYE+E DRLLDGLGPRFVDWWM KPLPVD DLLPE+VPGF+ PFRL
Sbjct: 326  TDNYNMNYQPRSGSLYEKECDRLLDGLGPRFVDWWMDKPLPVDADLLPEVVPGFEPPFRL 385

Query: 1415 CPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWG 1594
            CPP  RSKLTD ELTY RK++ PLPTHFVLGRNR LQGLAAAILKLW+K H AKIA+K+G
Sbjct: 386  CPPHARSKLTDDELTYFRKISHPLPTHFVLGRNRGLQGLAAAILKLWQKSHTAKIAIKYG 445

Query: 1595 VPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQE 1774
            VPNTDNE MANELK LTGGVLLLRNKF I+LYRGKDFLP  VA +V  RE+ L  CQL E
Sbjct: 446  VPNTDNEVMANELKRLTGGVLLLRNKFYILLYRGKDFLPRRVAALVERRELELKSCQLHE 505

Query: 1775 EAARLKASETFSITGEHFL--DSGVAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXX 1948
            E AR KA + FS   E  L  ++  +GTL+EF  I +   ++K+   + ++         
Sbjct: 506  EVARAKAIQAFSSFDELQLPQEASTSGTLTEFMKIQMKFEDIKEVNVDSNIALEAEIYRL 565

Query: 1949 XXXXXDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSD 2128
                 +Q+ K FIL KKIE+SA  L KL      + +D D+EI+++EER C R++GLK  
Sbjct: 566  EKELKEQQHKAFILNKKIERSAMELSKLNAVWTPAGEDIDLEIMTDEERECFRKMGLKMR 625

Query: 2129 SSLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVM 2251
            S LVLGRRG++DGV+EG+HQ+WKHREI KVITMQ+  SQV+
Sbjct: 626  SCLVLGRRGIFDGVLEGLHQYWKHREIAKVITMQRLLSQVI 666


>ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 760

 Score =  561 bits (1445), Expect = e-157
 Identities = 326/676 (48%), Positives = 401/676 (59%), Gaps = 30/676 (4%)
 Frame = +2

Query: 311  SSESTPHSGSTIKAP-----------TAPWMSKPLLVKPNEIMEF------TKRRTKKDF 439
            S+ STP   S +  P           TAPWM  PL ++P +  E        KRR   D 
Sbjct: 36   SATSTPSQSSVLPEPPSISNAAVNLRTAPWMKAPLHLQPQQQEEEGVDPANPKRRNGSD- 94

Query: 440  TIGENGEHPDMALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGD 619
              G   +    AL        GK AM++I K I KL+   DL E     E ++F    G 
Sbjct: 95   --GSGRDKCSRALGDSGIDKTGKYAMRRIAKSIGKLRRNGDLGETRMKLEEVEF----GG 148

Query: 620  LWGNGVYESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXXPWLRDERMVIRRVKK 799
                G  ES    +                               PW +D+  ++ R  K
Sbjct: 149  FDLEGFEESGTRRR------------------------------MPWEKDDDGIVLRRMK 178

Query: 800  EKVVTAAESSLDGILLERLRDEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFD 979
            +K VT+AE +LD +LLERL+ EA+ + KWVKV K GVTQ VV+Q+ F+W  NELA+LKFD
Sbjct: 179  KKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFD 238

Query: 980  IPLCQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSS 1159
            +PL +NMDRA+EIVEMKTGG+VVW  K+ L VYRG  Y    KH    + +      +  
Sbjct: 239  VPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKHSTKKQVHI-----SPQ 293

Query: 1160 STMNYQNTTTFARVSSDGSSLDETIHGKDDKWESLQM-------------ASLYEREADR 1300
            + +  +  T F+      S L+ +I+  D +WE                  SLYERE DR
Sbjct: 294  NPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLIRHENLQPLSGSLYERETDR 353

Query: 1301 LLDGLGPRFVDWWMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLAR 1480
            LLD LGPRF+DWWM KPLPVD D+LPE+VPG+  PFR CPP+T+  LTDA L +LRKLA 
Sbjct: 354  LLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAH 413

Query: 1481 PLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLL 1660
             LPTHFVLGRNRKLQGLAA+ILKLWEK  IAKIALKWGVPNTDNEQMA ELK+LTGG LL
Sbjct: 414  SLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELKNLTGGTLL 473

Query: 1661 LRNKFLIILYRGKDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITGEHFLDSG 1840
            LRNKF+IILYRG DFLP  VA  + +RE+ L R QL EE +RLKASE F    E+  + G
Sbjct: 474  LRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEENSRLKASEFFCFDTENMEERG 533

Query: 1841 VAGTLSEFHSIHLDIGNLKKDKAEVDVQXXXXXXXXXXXXXDQERKLFILKKKIEKSAKV 2020
             AGTLS+F  I +   +L     E  +Q              QER+L IL  K+EKS K 
Sbjct: 534  KAGTLSDFKDITVGYEDLSTGSTESRLQAEAEKGKIIRGLRMQERRLKILNFKVEKSTKE 593

Query: 2021 LEKLKNASRFSEQDPDMEIISEEERRCLREIGLKSDSSLVLGRRGVYDGVIEGMHQHWKH 2200
            L KL  + R  E D D E+I+ EER C R++GLK DS L LGRRGV+DGVIEG+HQHWKH
Sbjct: 594  LTKLNASWRRVEPDADQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKH 653

Query: 2201 REIVKVITMQKKFSQV 2248
            RE+VKVITMQ+ F+QV
Sbjct: 654  REVVKVITMQRAFNQV 669