BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00017390
         (1361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   362   2e-97
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   357   5e-96
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla...   352   3e-94
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo...   350   6e-94
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr...   349   2e-93
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo...   346   1e-92
gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus pe...   346   1e-92
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla...   343   1e-91
ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Caps...   343   1e-91
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla...   342   2e-91
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu...   341   5e-91
ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutr...   339   1e-90
ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp....   338   2e-90
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   337   7e-90
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu...   336   2e-89
gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]   336   2e-89
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   335   2e-89
gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]    335   3e-89
ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana] g...   335   3e-89
gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]               324   6e-86

>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  362 bits (929), Expect = 2e-97
 Identities = 179/232 (77%), Positives = 206/232 (88%)
 Frame = +1

Query: 268 SNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTF 447
           S++ KP   PV AQA+RSFS   KE  +A+ ADL FE PLKIVEYPDPILR KNKR+ TF
Sbjct: 53  SSIAKPPSIPVRAQAKRSFS--FKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTF 110

Query: 448 DESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYS 627
           D++LKKLVDEMFDVMY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVL+NPR+ +YS
Sbjct: 111 DDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYS 170

Query: 628 KKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGI 807
           KKIVPFNEGCLSFPGIYADV RP+S+++DA+DI GARF VNL+GLPARVFQHEYDHL+GI
Sbjct: 171 KKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHLEGI 230

Query: 808 LFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           LFFDRM+DEVLDSIR +LQALEKK+E++TG  SPEKI+ R+ KK A GFGKS
Sbjct: 231 LFFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGKS 282


>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  357 bits (917), Expect = 5e-96
 Identities = 183/278 (65%), Positives = 221/278 (79%), Gaps = 2/278 (0%)
 Frame = +1

Query: 136 MACATCIHSNPFAHXXXXXXXXXXXXXHSP--VRRLLAGAGFHTLSSNLYKPLVRPVIAQ 309
           MA A+C+HS+  ++              S   + R  + + F + ++    PL++ V  Q
Sbjct: 1   MAFASCLHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQ-VQVQ 59

Query: 310 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 489
           A+R FS   KE  +AS ADL FE PLKIVEYPDPILRAKNK + TFD++LKKLVDEMFDV
Sbjct: 60  AKRGFS--FKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDV 117

Query: 490 MYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFP 669
           MY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ +YSKKIV FNEGCLSFP
Sbjct: 118 MYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFP 177

Query: 670 GIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDEVLDSI 849
           GIYADVERP+S+++DA+DITGARF +NL+GLPARVFQHE+DHLQG LFFDRM++EVLDSI
Sbjct: 178 GIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSI 237

Query: 850 RDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
              LQ LE+KYE+RTG PSPE+I+ R+R+K A GFGKS
Sbjct: 238 HANLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275


>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
           [Citrus sinensis] gi|568832146|ref|XP_006470304.1|
           PREDICTED: peptide deformylase 1B, chloroplastic-like
           isoform X2 [Citrus sinensis]
           gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
           deformylase 1B, chloroplastic-like isoform X3 [Citrus
           sinensis]
          Length = 282

 Score =  352 bits (902), Expect = 3e-94
 Identities = 179/278 (64%), Positives = 219/278 (78%), Gaps = 2/278 (0%)
 Frame = +1

Query: 136 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVR--RLLAGAGFHTLSSNLYKPLVRPVIAQ 309
           MACAT + S+  +H                +R  RL + A   +  +    PL    + Q
Sbjct: 9   MACATRLCSSSLSHALFPVLINQTAVSTKLLRFNRLYSTARLFSSPNRTNLPL----LTQ 64

Query: 310 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 489
           A+R +    KE  VAS ADL FE PLKIVEYPDPILRAKNKR+ TFD++LKKLVDEMFD 
Sbjct: 65  AKRRYGFSTKEDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDF 124

Query: 490 MYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFP 669
           MY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ +YS K++P+ EGCLSFP
Sbjct: 125 MYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFP 184

Query: 670 GIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDEVLDSI 849
           GI+ADVERP+S+++DA+DI GARF V+L+ LPARVFQHE+DHLQGILFF+RM+D+VLDSI
Sbjct: 185 GIHADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTDDVLDSI 244

Query: 850 RDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           R++L+ALEKKYE++TGL SPEKI+A +R+K AVGFGKS
Sbjct: 245 REQLEALEKKYEDKTGLQSPEKIEASKRRKAAVGFGKS 282


>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
           gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
          Length = 278

 Score =  350 bits (899), Expect = 6e-94
 Identities = 171/235 (72%), Positives = 203/235 (86%)
 Frame = +1

Query: 259 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 438
           T S N   P + PV AQA+R F  ++K+  VAS  DL F+ PLKIVEYPDPILR +NKR+
Sbjct: 46  TSSLNQTNPQLTPVHAQAKRGF--LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRI 103

Query: 439 KTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIK 618
            TFDE+LKKLVDEMFDVMY+TDGIGLSAPQVG+NV+LMVFNPVGERGEG+EIVLVNPR+ 
Sbjct: 104 DTFDENLKKLVDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVN 163

Query: 619 RYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHL 798
           +YSKK V FNEGCLSFP IYADVERP+S+++DA+D+ GARF VNL+GL AR+FQHE+DHL
Sbjct: 164 KYSKKTVLFNEGCLSFPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHL 223

Query: 799 QGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           QGILFFDRM+ EVLDSIR +L+ALEKKYE+ TGLPSPEK++ ++RKK A GFGKS
Sbjct: 224 QGILFFDRMTGEVLDSIRAQLEALEKKYEDTTGLPSPEKVETQKRKKAAAGFGKS 278


>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
           gi|567908433|ref|XP_006446530.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|567908435|ref|XP_006446531.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|557549140|gb|ESR59769.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|557549141|gb|ESR59770.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|557549142|gb|ESR59771.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
          Length = 274

 Score =  349 bits (895), Expect = 2e-93
 Identities = 166/223 (74%), Positives = 201/223 (90%)
 Frame = +1

Query: 295 PVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 474
           P++ QA+R +    KE +VAS ADL FE PLKIVEYPDPILRAKNKR+ TFD +LKKLVD
Sbjct: 52  PLLTQAKRRYGFSTKEDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVD 111

Query: 475 EMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEG 654
           EMFDVMY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ +YS K++P+ EG
Sbjct: 112 EMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEG 171

Query: 655 CLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDE 834
           CLSFPGI+ADVERP+S+++DA+DI GARF V+L+ LPARVFQHE+DHLQGILFF+RM+ +
Sbjct: 172 CLSFPGIHADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTGD 231

Query: 835 VLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           VLD I+++L+ALEKKYE++TGL SPEKI+AR+R+K AVGFGKS
Sbjct: 232 VLDGIQEQLEALEKKYEDKTGLQSPEKIEARKRRKAAVGFGKS 274


>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
          Length = 279

 Score =  346 bits (887), Expect = 1e-92
 Identities = 171/236 (72%), Positives = 203/236 (86%), Gaps = 1/236 (0%)
 Frame = +1

Query: 259 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 438
           T S N   P + PV AQA+R F  ++K+  VAS  DL F+ PLKIVEYPDPILR +NKR+
Sbjct: 46  TSSLNQTNPQLTPVHAQAKRGF--LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRI 103

Query: 439 KTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIK 618
            TFDE+LKKLVDEMFDVMY+TDGIGLSAPQVG+NV+LMVFNPVGERGEG+EIVLVNPR+ 
Sbjct: 104 DTFDENLKKLVDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVN 163

Query: 619 RYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHL 798
           +YSKK V FNEGCLSFP IYADVERP+S+++DA+D+ GARF VNL+GL AR+FQHE+DHL
Sbjct: 164 KYSKKTVLFNEGCLSFPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHL 223

Query: 799 -QGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
            QGILFFDRM+ EVLDSIR +L+ALEKKYE+ TGLPSPEK++ ++RKK A GFGKS
Sbjct: 224 QQGILFFDRMTGEVLDSIRAQLEALEKKYEDTTGLPSPEKVETQKRKKAAAGFGKS 279


>gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
          Length = 271

 Score =  346 bits (887), Expect = 1e-92
 Identities = 171/223 (76%), Positives = 197/223 (88%)
 Frame = +1

Query: 295 PVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 474
           PV AQA+R FS   KE  VA+AAD+ FE PLKIVEYPDPILRAKNKR+ +FDE+LK LVD
Sbjct: 51  PVHAQAKRGFS--VKEDEVATAADVEFETPLKIVEYPDPILRAKNKRIDSFDENLKILVD 108

Query: 475 EMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVPFNEG 654
           EMFD+MY+TDGIGLSAPQVGINV+LMVFNPVGERGEGEEIVLVNPR+ RYS+K  PFNEG
Sbjct: 109 EMFDIMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRPFNEG 168

Query: 655 CLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGILFFDRMSDE 834
           CLSFPGIYADV RP+S+++DA+DI GARF VNL+GLPARVFQHE+DHLQGILFFDRMS+ 
Sbjct: 169 CLSFPGIYADVVRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMSEG 228

Query: 835 VLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           VL++I  +LQ LEKKYE++TGLPSPE+I  R+R K A GFGKS
Sbjct: 229 VLETICAQLQTLEKKYEDKTGLPSPERIQTRKRMKAATGFGKS 271


>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 275

 Score =  343 bits (880), Expect = 1e-91
 Identities = 180/254 (70%), Positives = 213/254 (83%), Gaps = 9/254 (3%)
 Frame = +1

Query: 229 RRLLAGAGFHTLS--SNLYKPL-----VRPVIAQARRSFSPMAKEAAVASAADLLFEGPL 387
           RR L  A FH     S+  +PL        V AQA+R FS   KE  VASAAD+ FE PL
Sbjct: 24  RRPLFPAIFHRFCTFSSADRPLSTANRFTAVRAQAKRGFS--LKEDQVASAADVEFETPL 81

Query: 388 KIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPV 567
           +IVEYPDPILRAKNKR+ TFD++LKKLV+EMFD+MYRTDGIGLSAPQVGINV+LMVFNPV
Sbjct: 82  EIVEYPDPILRAKNKRLDTFDDNLKKLVEEMFDIMYRTDGIGLSAPQVGINVQLMVFNPV 141

Query: 568 GERGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEV 747
           GERGEGEEIVLVNPR+ RYS+K   FNEGCLSFPGIYADV+RP+S+++DA+DI+GARF V
Sbjct: 142 GERGEGEEIVLVNPRVSRYSQKTRLFNEGCLSFPGIYADVQRPESVKIDARDISGARFTV 201

Query: 748 NLTGLPARVFQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDAR 927
           NL+GLPARVFQHE+DHLQGILFFDRM++ VL+SI ++LQALEKKYE++TGLPSPE+I++R
Sbjct: 202 NLSGLPARVFQHEFDHLQGILFFDRMTEGVLESISEQLQALEKKYEDKTGLPSPERIESR 261

Query: 928 RRK--KKAVGFGKS 963
           +R   K A GFGKS
Sbjct: 262 KRMKLKAAAGFGKS 275


>ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Capsella rubella]
           gi|482557139|gb|EOA21331.1| hypothetical protein
           CARUB_v10001691mg [Capsella rubella]
          Length = 273

 Score =  343 bits (879), Expect = 1e-91
 Identities = 167/242 (69%), Positives = 202/242 (83%)
 Frame = +1

Query: 235 LLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPI 414
           LL   G  + + N   PL  PV A  +R      KE  VASA+DL FE PLKIVEYPDPI
Sbjct: 34  LLKSTGMFSSAVNRSTPLTSPVRAAVKRV---PRKEDEVASASDLEFETPLKIVEYPDPI 90

Query: 415 LRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEI 594
           LRAKNKR+  FDE+LK LVD MFD+MY+TDGIGLSAPQVG+NV+LMVFNP GE GEGEEI
Sbjct: 91  LRAKNKRIGVFDENLKNLVDAMFDIMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGEEI 150

Query: 595 VLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARV 774
           VLVNP+I +YS K+VPF+EGCLSFPGIYA+V RP S+++DA+DITGA+F ++L+ LPAR+
Sbjct: 151 VLVNPKINKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGAKFSISLSRLPARI 210

Query: 775 FQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGF 954
           FQHEYDHL+G+LFFDRM+DEVLDSIR+EL+ALEKKYEE+TGLPSPE++ AR+++K  VGF
Sbjct: 211 FQHEYDHLEGVLFFDRMTDEVLDSIREELEALEKKYEEKTGLPSPERVQARQKRKAGVGF 270

Query: 955 GK 960
           GK
Sbjct: 271 GK 272


>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
           tuberosum]
          Length = 279

 Score =  342 bits (877), Expect = 2e-91
 Identities = 170/237 (71%), Positives = 199/237 (83%)
 Frame = +1

Query: 253 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 432
           F + SSN  KP    V AQARR  S   K   +A+ ADL FE PLKIVEYPDPILRAKNK
Sbjct: 45  FFSASSN--KPPKLAVYAQARRVLSSKTKGDEIATPADLSFEVPLKIVEYPDPILRAKNK 102

Query: 433 RVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPR 612
           R+  FD +LKKLVDEMFD+MY+TDGIGLSAPQVG+NV+LMVFN  GERGEGEEIVLVNPR
Sbjct: 103 RIGKFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPR 162

Query: 613 IKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYD 792
           + RYS++I+P+ EGCLSFP I+ DVERPDS++V AQDI GARFE++L+ LPARVFQHE+D
Sbjct: 163 VSRYSRRIIPYEEGCLSFPMIHGDVERPDSVKVGAQDINGARFEISLSALPARVFQHEFD 222

Query: 793 HLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           HLQG+LFFD+M+DEVLD+IR+ L ALEKKYEERTGLP+PE I+ R+ KK AVGFGKS
Sbjct: 223 HLQGVLFFDKMTDEVLDTIRETLVALEKKYEERTGLPTPESINTRKTKKAAVGFGKS 279


>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
           gi|566152890|ref|XP_006369926.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|566152892|ref|XP_006369927.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348928|gb|EEE84852.2| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348929|gb|ERP66495.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348930|gb|ERP66496.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
          Length = 268

 Score =  341 bits (874), Expect = 5e-91
 Identities = 167/248 (67%), Positives = 200/248 (80%)
 Frame = +1

Query: 217 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIV 396
           HS  + L         SS + +P    +  +++    P  K+  VA+ +DL FE PLKIV
Sbjct: 20  HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIV 79

Query: 397 EYPDPILRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGER 576
           EYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY+TDGIGLSAPQVGINV+LMVFNP  E 
Sbjct: 80  EYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEH 139

Query: 577 GEGEEIVLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLT 756
           GEG+EIVLVNPR+ +YSKK V FNEGCLSFPGIYADV+RP+S+++DA+DI GARF VNL+
Sbjct: 140 GEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLS 199

Query: 757 GLPARVFQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRK 936
           GLPARVFQHE+DHLQGILFFDRM++EVLDSIR  LQALEKKYE++TG PSPE+I+  R K
Sbjct: 200 GLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLK 259

Query: 937 KKAVGFGK 960
           K A GFGK
Sbjct: 260 KVAAGFGK 267


>ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutrema salsugineum]
           gi|557101069|gb|ESQ41432.1| hypothetical protein
           EUTSA_v10014367mg [Eutrema salsugineum]
          Length = 273

 Score =  339 bits (870), Expect = 1e-90
 Identities = 164/241 (68%), Positives = 200/241 (82%)
 Frame = +1

Query: 238 LAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPIL 417
           L G    + + N   PL  PV A+ +R      K+  VAS +DL FE PLKIVEYPDPIL
Sbjct: 35  LKGTVMFSSAVNRIGPLTSPVRAEVKRL---SRKDDEVASVSDLQFETPLKIVEYPDPIL 91

Query: 418 RAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIV 597
           RAKNKR+  FDE+LK LVD MF VMY+TDG+GLSAPQVG+NV+LMVFNP GERGEGEEIV
Sbjct: 92  RAKNKRIGVFDENLKNLVDAMFHVMYKTDGVGLSAPQVGLNVQLMVFNPAGERGEGEEIV 151

Query: 598 LVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVF 777
           LVNP+I +YS K+VPF+EGCLSFPGIYADV RP S+++DA+DITGARF ++L+ LPAR+F
Sbjct: 152 LVNPKINKYSDKLVPFSEGCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIF 211

Query: 778 QHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFG 957
           QHEYDHL+G+LFFD+M+D+VLDSIR+EL+ALEKKYEE+TGLPSPE++  RR++K  VGFG
Sbjct: 212 QHEYDHLEGVLFFDKMTDQVLDSIREELEALEKKYEEKTGLPSPERVQERRKRKAGVGFG 271

Query: 958 K 960
           K
Sbjct: 272 K 272


>ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319520|gb|EFH49942.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  338 bits (868), Expect = 2e-90
 Identities = 163/232 (70%), Positives = 198/232 (85%)
 Frame = +1

Query: 265 SSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKT 444
           + N   PL+ PV A+ +R      K+  VASA+DL FE PL+IVEYPDPILRAKNKR+  
Sbjct: 44  TGNRTSPLISPVRAEVKRV---SRKDVEVASASDLQFETPLRIVEYPDPILRAKNKRIGV 100

Query: 445 FDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRY 624
           FD++LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEGEEIVLVNP IK+Y
Sbjct: 101 FDQNLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGEEIVLVNPIIKKY 160

Query: 625 SKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQG 804
           S K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G
Sbjct: 161 SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEG 220

Query: 805 ILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 960
           +LFFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+I AR ++K  VGFGK
Sbjct: 221 VLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERIQARHKRKAGVGFGK 272


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score =  337 bits (864), Expect = 7e-90
 Identities = 166/237 (70%), Positives = 199/237 (83%)
 Frame = +1

Query: 253 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 432
           F + SSN  KP    V AQARR  S   K   +A+ ADL F  PLKIVEYPDPILRAKNK
Sbjct: 45  FFSASSN--KPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNK 102

Query: 433 RVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPR 612
           R+  FD +LKKLVDEMFD+MY+TDGIGLSAPQVG+NV+LMVFN  GERGEGEEIVLVNPR
Sbjct: 103 RIDNFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPR 162

Query: 613 IKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYD 792
           + RYS++I+P+ EGCLSFP I+ DV+RP+S++VDAQDI G RFE++L+ LPARVFQHE+D
Sbjct: 163 VSRYSRRIIPYEEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFD 222

Query: 793 HLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           HLQG+LFFD+M+DEVLD+IR++L ALEKKYE+RTGLP+PE I+ R+ KK AVGFGKS
Sbjct: 223 HLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS 279


>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
           gi|550348931|gb|ERP66497.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
          Length = 269

 Score =  336 bits (861), Expect = 2e-89
 Identities = 167/249 (67%), Positives = 199/249 (79%), Gaps = 1/249 (0%)
 Frame = +1

Query: 217 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAA-DLLFEGPLKI 393
           HS  + L         SS + +P    +  +++    P  K+  VA+   DL FE PLKI
Sbjct: 20  HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATTGDLEFEAPLKI 79

Query: 394 VEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGE 573
           VEYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY+TDGIGLSAPQVGINV+LMVFNP  E
Sbjct: 80  VEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADE 139

Query: 574 RGEGEEIVLVNPRIKRYSKKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNL 753
            GEG+EIVLVNPR+ +YSKK V FNEGCLSFPGIYADV+RP+S+++DA+DI GARF VNL
Sbjct: 140 HGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNL 199

Query: 754 TGLPARVFQHEYDHLQGILFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRR 933
           +GLPARVFQHE+DHLQGILFFDRM++EVLDSIR  LQALEKKYE++TG PSPE+I+  R 
Sbjct: 200 SGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRL 259

Query: 934 KKKAVGFGK 960
           KK A GFGK
Sbjct: 260 KKVAAGFGK 268


>gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]
          Length = 273

 Score =  336 bits (861), Expect = 2e-89
 Identities = 161/230 (70%), Positives = 197/230 (85%)
 Frame = +1

Query: 271 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 450
           N   PL   V A+ +R      K+  VASA D+ FE PLKIVEYPDPILRAKNKR+  FD
Sbjct: 46  NRTSPLTSSVRAEVKRV---SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFD 102

Query: 451 ESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSK 630
           E+LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEG+EIVLVNP+IK+YS 
Sbjct: 103 ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD 162

Query: 631 KIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGIL 810
           K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G+L
Sbjct: 163 KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSSLPARIFQHEYDHLEGVL 222

Query: 811 FFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 960
           FFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+++AR+++K  VGFGK
Sbjct: 223 FFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEARQKRKAGVGFGK 272


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  335 bits (860), Expect = 2e-89
 Identities = 172/232 (74%), Positives = 200/232 (86%)
 Frame = +1

Query: 268 SNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTF 447
           S+ +K     V AQA+R FS  AKE  VAS+ DL FE PLKIVEYPDPILRAKNKR+ +F
Sbjct: 45  SSKFKAPSTLVYAQAKRGFS--AKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSF 102

Query: 448 DESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYS 627
           D++LKKLV EMFDVMY+TDGIGLSAPQVG+NV+LMVFN VGERGEGEEIVLVNP++ RYS
Sbjct: 103 DDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYS 162

Query: 628 KKIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGI 807
           KK V FNEGCLSFP IYADVERP+S+++DA+DI+G RF VNL+GL ARVFQHE+DHLQG 
Sbjct: 163 KKTVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGT 222

Query: 808 LFFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGKS 963
           LFFDRM+DEVL++IR +LQALEKKYE+RTGLPSPE+I+  RRK  A GFGKS
Sbjct: 223 LFFDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIENFRRKVGA-GFGKS 273


>gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
          Length = 273

 Score =  335 bits (859), Expect = 3e-89
 Identities = 161/230 (70%), Positives = 197/230 (85%)
 Frame = +1

Query: 271 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 450
           N   PL   V A+ +R      K+  VASA D+ FE PLKIVEYPDPILRAKNKR+  FD
Sbjct: 46  NRNSPLTSSVRAEVKRV---SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFD 102

Query: 451 ESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSK 630
           E+LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEG+EIVLVNP+IK+YS 
Sbjct: 103 ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD 162

Query: 631 KIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGIL 810
           K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G+L
Sbjct: 163 KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVL 222

Query: 811 FFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 960
           FFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+++AR+++K  VGFGK
Sbjct: 223 FFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEARQKRKAGVGFGK 272


>ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
           gi|30684999|ref|NP_850821.1| peptide deformylase 1B
           [Arabidopsis thaliana]
           gi|39932734|sp|Q9FUZ2.2|DEF1B_ARATH RecName:
           Full=Peptide deformylase 1B,
           chloroplastic/mitochondrial; Short=AtDEF2;
           Short=AtPDF1B; Short=PDF 1B; AltName: Full=Polypeptide
           deformylase; Flags: Precursor gi|7573315|emb|CAB87633.1|
           putative protein [Arabidopsis thaliana]
           gi|15292891|gb|AAK92816.1| unknown protein [Arabidopsis
           thaliana] gi|20465677|gb|AAM20307.1| unknown protein
           [Arabidopsis thaliana] gi|332004676|gb|AED92059.1|
           peptide deformylase 1B [Arabidopsis thaliana]
           gi|332004677|gb|AED92060.1| peptide deformylase 1B
           [Arabidopsis thaliana]
          Length = 273

 Score =  335 bits (859), Expect = 3e-89
 Identities = 161/230 (70%), Positives = 197/230 (85%)
 Frame = +1

Query: 271 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 450
           N   PL   V A+ +R      K+  VASA D+ FE PLKIVEYPDPILRAKNKR+  FD
Sbjct: 46  NRTSPLTSSVRAEVKRV---SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFD 102

Query: 451 ESLKKLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSK 630
           E+LK LVD MFDVMY+TDGIGLSAPQVG+NV+LMVFNP GE GEG+EIVLVNP+IK+YS 
Sbjct: 103 ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD 162

Query: 631 KIVPFNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDHLQGIL 810
           K+VPF+EGCLSFPGIYA+V RP S+++DA+DITG RF ++L+ LPAR+FQHEYDHL+G+L
Sbjct: 163 KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVL 222

Query: 811 FFDRMSDEVLDSIRDELQALEKKYEERTGLPSPEKIDARRRKKKAVGFGK 960
           FFDRM+D+VLDSIR+EL+ALEKKYEE+TGLPSPE+++AR+++K  VGFGK
Sbjct: 223 FFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEARQKRKAGVGFGK 272


>gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]
          Length = 266

 Score =  324 bits (830), Expect = 6e-86
 Identities = 172/264 (65%), Positives = 200/264 (75%), Gaps = 37/264 (14%)
 Frame = +1

Query: 283 PLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLK 462
           PLV PV+AQARR  S   KE  VAS ADL FE PLKIV YPDPILRAKNKR+ +FD++LK
Sbjct: 5   PLV-PVVAQARRGSS--LKEDEVASPADLQFEPPLKIVVYPDPILRAKNKRIDSFDDNLK 61

Query: 463 KLVDEMFDVMYRTDGIGLSAPQVGINVELMVFNPVGERGEGEEIVLVNPRIKRYSKKIVP 642
           KLV EMFDVMY+TDGIGLSAPQVG+NV+LMV NP GERG GEEIVLVNPR+ RYSKK+V 
Sbjct: 62  KLVHEMFDVMYKTDGIGLSAPQVGMNVQLMVLNPAGERGVGEEIVLVNPRVSRYSKKMVL 121

Query: 643 FNEGCLSFPGIYADVERPDSLQVDAQDITGARFEVNLTGLPARVFQHEYDH--------- 795
           FNEGCLSFPGIYADV+RP+S+++DA+D+ GARF VNL+GLPARVFQHE+DH         
Sbjct: 122 FNEGCLSFPGIYADVQRPESVKIDARDVNGARFTVNLSGLPARVFQHEFDHLQVSIQHFL 181

Query: 796 ---------------------------LQGILFFDRMSDEVLDSIRDELQALEKKYEERT 894
                                      LQG+LFFDRM++ VLD IR +LQ+LEKKYE++T
Sbjct: 182 IQYIIAFLMKNYPLYFISSFIFLWQPCLQGVLFFDRMTEGVLDGIRAQLQSLEKKYEDKT 241

Query: 895 GLPSPEKIDARRRKKK-AVGFGKS 963
           G PSPE+ID  R+KKK AVGFGKS
Sbjct: 242 GFPSPERIDETRKKKKVAVGFGKS 265