BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00017310
         (544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]       90   3e-16
ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotei...    89   7e-16
ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotei...    89   7e-16
ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotei...    89   9e-16
ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotei...    89   9e-16
ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Popu...    77   2e-12
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...    70   4e-10
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...    67   2e-09
gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus pe...    63   4e-08
ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei...    61   2e-07
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]     60   3e-07
ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citr...    55   8e-06
ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citr...    55   8e-06

>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
 Frame = -2

Query: 540 RGWSDQPXXXXXXXXXXXXXXHYDYYG--KGRGQYDIPDGQGGDYDRYRESDRDNDRYDQ 367
           RGW +Q               HYDYY   +G+GQYD    QG D DRY++SDR +DRYDQ
Sbjct: 437 RGWYEQSDRGRKRPEGEHDHGHYDYYDHYQGQGQYDNQGAQGDD-DRYQDSDRYHDRYDQ 495

Query: 366 MEDDGYGYDRDASEP--KDKDYRRSDRSLSREH*VLFLRQLWLSHD 235
           M++D YGY+R  SEP  KD+DY+RSDRSLS            LSHD
Sbjct: 496 MDEDNYGYERTTSEPQEKDRDYQRSDRSLSHS----------LSHD 531


>ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Solanum lycopersicum]
          Length = 390

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -2

Query: 474 YDYYG--KGRGQYDIPDGQGGDYDRYRESDRDNDRYDQMEDDGYGYDRDASEPK--DKDY 307
           YDYY   +GRG Y+ PD QGGD DRY+++ R +DRYDQME+D Y YD  ASE K  D+DY
Sbjct: 319 YDYYDHHQGRGDYENPDAQGGD-DRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDY 377

Query: 306 RRSDRSLSREH 274
           +RSDRS SRE+
Sbjct: 378 KRSDRSHSREY 388


>ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Solanum lycopersicum]
          Length = 482

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -2

Query: 474 YDYYG--KGRGQYDIPDGQGGDYDRYRESDRDNDRYDQMEDDGYGYDRDASEPK--DKDY 307
           YDYY   +GRG Y+ PD QGGD DRY+++ R +DRYDQME+D Y YD  ASE K  D+DY
Sbjct: 411 YDYYDHHQGRGDYENPDAQGGD-DRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDY 469

Query: 306 RRSDRSLSREH 274
           +RSDRS SRE+
Sbjct: 470 KRSDRSHSREY 480


>ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X2 [Solanum tuberosum]
          Length = 474

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -2

Query: 474 YDYYG--KGRGQYDIPDGQGGDYDRYRESDRDNDRYDQMEDDGYGYDRDASEPK--DKDY 307
           YDYY   +GRG Y+ PD QGGD DRY+++ R +DRYDQME+D Y YD  ASE K  D+DY
Sbjct: 403 YDYYDHHQGRGDYENPDAQGGD-DRYKDASRGHDRYDQMEEDNYAYDHGASEAKERDQDY 461

Query: 306 RRSDRSLSREH 274
           +RSDRS SRE+
Sbjct: 462 KRSDRSHSREY 472


>ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Solanum tuberosum]
          Length = 475

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -2

Query: 474 YDYYG--KGRGQYDIPDGQGGDYDRYRESDRDNDRYDQMEDDGYGYDRDASEPK--DKDY 307
           YDYY   +GRG Y+ PD QGGD DRY+++ R +DRYDQME+D Y YD  ASE K  D+DY
Sbjct: 404 YDYYDHHQGRGDYENPDAQGGD-DRYKDASRGHDRYDQMEEDNYAYDHGASEAKERDQDY 462

Query: 306 RRSDRSLSREH 274
           +RSDRS SRE+
Sbjct: 463 KRSDRSHSREY 473


>ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
           gi|550334743|gb|EEE90671.2| hypothetical protein
           POPTR_0007s12690g [Populus trichocarpa]
          Length = 497

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
 Frame = -2

Query: 540 RGWSDQPXXXXXXXXXXXXXXHYDYYG--KGRGQYDIPDGQGGDYDRYRE-SDRDNDRYD 370
           RGW +QP               YD+Y   + RG YD  D QG D DRY +  DRD+DRYD
Sbjct: 404 RGWYEQPEQGQRLPDAENDPR-YDHYEHHRSRGPYDPMDVQG-DQDRYDQYPDRDHDRYD 461

Query: 369 QMEDDGYGYDRDASE--PKDKDYRRSDRSLSREH 274
           QMEDD Y YDR  SE   K+++YRRS+RS+SR++
Sbjct: 462 QMEDDDYHYDRGTSESREKEREYRRSERSVSRDY 495


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
 Frame = -2

Query: 537 GWSDQPXXXXXXXXXXXXXXHYDYYG-KGRGQYDIPDGQGGDYDRY-RESDRDNDRYDQM 364
           GW +QP              HY +Y  + RGQYD  D QG D+D Y R +D D DRY+QM
Sbjct: 416 GWYEQPEHGHRRPEAEHDDEHYKHYDHQARGQYDHLDAQG-DHDLYDRHADNDRDRYNQM 474

Query: 363 EDDGYGYD--------RDASEPKDKDYRRSDRSLSRE 277
           ++D Y YD        RD +   +++YRRS+RSLSR+
Sbjct: 475 DEDNYHYDHAAYDSRERDRTRDLEREYRRSERSLSRD 511


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
           communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
           ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
 Frame = -2

Query: 537 GWSDQPXXXXXXXXXXXXXXHYDYYGKGRGQYDIPDGQGGDYDRYRE-SDRDNDRYDQME 361
           GW +QP              +  Y  + RGQ+D  DG G D+DRY +  D D DRYD+++
Sbjct: 415 GWYEQPEQGHRRQDAEHDQRYDHYEHRSRGQFDNMDGHG-DHDRYDQYPDHDRDRYDRID 473

Query: 360 DDGYGYDRDASEPKDK--DYRRSDRSLSREH 274
           +D Y YD   SE +++  +YR S+RS+SRE+
Sbjct: 474 EDDYHYDGGTSESREREHEYRHSERSVSREY 504


>gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus persica]
          Length = 517

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
 Frame = -2

Query: 540 RGWSDQPXXXXXXXXXXXXXXHYDYYGKGRGQYDIPDGQGGDYDRYRE-SDRDNDRYDQM 364
           +GW +QP               Y+++   R QYD  D Q  D+DRY++  DR +DRYD+M
Sbjct: 421 QGWFEQPEHGHRRSDPDQDAEPYEHH---RSQYDQLDVQH-DHDRYKQYPDRGHDRYDRM 476

Query: 363 EDDGYGY--------DRDASEPKDKDYRRSDRSLSREH 274
           E+D Y Y        +RD     ++DYRRS RSLSR++
Sbjct: 477 EEDDYHYEQAPVESRERDRDGDVERDYRRSSRSLSRDY 514


>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
           small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus]
          Length = 505

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
 Frame = -2

Query: 540 RGWSDQPXXXXXXXXXXXXXXHYDYYGKGRGQYDIPDGQGGDYDRYRESDRDNDRYDQME 361
           RGW DQP               +  + +GRGQYD P+G   D DRY       D+YD   
Sbjct: 417 RGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGH-RDQDRY-------DQYDDRM 468

Query: 360 DDGYGYDRDASEPKDK--------DYRRSDRSLSREH 274
           DD Y Y+R  SE  D+        +Y+RS+RS SRE+
Sbjct: 469 DDDYHYERGNSESHDRERSRDLNHEYKRSERSHSREY 505


>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
          Length = 506

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
 Frame = -2

Query: 543 HRGWSDQPXXXXXXXXXXXXXXHYDYYG--KGRGQYDIPDGQGGDYDRYRESDRDNDRYD 370
           HRG  +QP               YD+Y   +GRGQYD  D  G DY++Y + D+  D + 
Sbjct: 414 HRGRYNQPGHGKRHADTEHDPDRYDHYEHQRGRGQYDEGDDHG-DYNQYPDHDKMEDDHH 472

Query: 369 QMEDDGYGYDRDASEPKDKDYRRSDRSLSREH 274
                    DRD +  KD DY RS+RS SRE+
Sbjct: 473 TERPKSKSRDRDRNRDKDHDYHRSERSHSREY 504


>ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
           gi|568824794|ref|XP_006466779.1| PREDICTED: U1 small
           nuclear ribonucleoprotein 70 kDa-like [Citrus sinensis]
           gi|557527686|gb|ESR38936.1| hypothetical protein
           CICLE_v10025502mg [Citrus clementina]
          Length = 480

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -2

Query: 420 GDYDRYRE-SDRDNDRYDQMEDDGYGYDRDASEPKDKDYRRSDRSLSREH 274
           GD+DRY +  D DNDRYDQME+D Y YDR  SE +DK+     R L RE+
Sbjct: 434 GDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKE---RTRDLDREY 480


>ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
           gi|557527685|gb|ESR38935.1| hypothetical protein
           CICLE_v10025502mg [Citrus clementina]
          Length = 478

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -2

Query: 420 GDYDRYRE-SDRDNDRYDQMEDDGYGYDRDASEPKDKDYRRSDRSLSREH 274
           GD+DRY +  D DNDRYDQME+D Y YDR  SE +DK+     R L RE+
Sbjct: 432 GDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKE---RTRDLDREY 478