BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00016974
         (553 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]   176   1e-49
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   174   1e-49
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   167   5e-49
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   169   5e-49
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   164   2e-48
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   167   3e-48
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...   167   3e-48
gb|EMT21953.1| ABC transporter C family member 10 [Aegilops taus...   165   3e-48
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   174   4e-48
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   165   6e-48
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                167   1e-47
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   164   3e-47
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]   172   4e-47
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   168   5e-47
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   164   6e-47
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   174   1e-46
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]   174   1e-46
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   164   1e-46
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc...   164   1e-46
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz...   164   1e-46

>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score =  176 bits (447), Expect(2) = 1e-49
 Identities = 88/148 (59%), Positives = 109/148 (73%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            ACK +LRY+ G+   GL F P T+  LE FSDADWA +VDDRR T G+ V+LG NL+TW 
Sbjct: 900  ACKRLLRYVSGTRTLGLSFXPTTRFTLEGFSDADWACNVDDRRXTTGYXVFLGGNLVTWS 959

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
            SRKQ V+ARS+TES+YRA LA  T +LIWIKSL  EL  PL    I WC N+ A +LA N
Sbjct: 960  SRKQQVIARSNTESKYRA-LASVTMELIWIKSLLDELQFPLQHRPIAWCXNLXAHALAHN 1018

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            P++H+ TKHIEVDVHFIRE + ++ +EV
Sbjct: 1019 PIYHSRTKHIEVDVHFIREKILHRALEV 1046



 Score = 46.2 bits (108), Expect(2) = 1e-49
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT  D+SF+VNKLSQFL APT  H+   K
Sbjct: 869 LQYLTLTRLDISFSVNKLSQFLKAPTQHHWSACK 902


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  174 bits (441), Expect(2) = 1e-49
 Identities = 80/146 (54%), Positives = 110/146 (75%)
 Frame = +2

Query: 113 KMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWGSR 292
           K VLRY+KGSL++GL FQP + L L +++DADWA+  DDRRST G+C++ G NL++W + 
Sbjct: 142 KRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASCPDDRRSTSGYCIFFGGNLVSWSAS 201

Query: 293 KQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASNPV 472
           KQ VV+RSSTESEYR  LA A A+L WI+SL  EL +PL  P +++CDN+S   LA+NP+
Sbjct: 202 KQKVVSRSSTESEYRG-LANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAANPI 260

Query: 473 FHAHTKHIEVDVHFIREMVRNKDIEV 550
            H+  KH+E+D HF+RE V  K ++V
Sbjct: 261 LHSRAKHVEIDYHFVRERVLQKTLDV 286



 Score = 48.1 bits (113), Expect(2) = 1e-49
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +3

Query: 3   LVLFIQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           LV  +QY T+T PD+++TVNKL QF+HAPT  H  + K
Sbjct: 105 LVGALQYCTITRPDIAYTVNKLCQFMHAPTSTHLQVVK 142


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  167 bits (424), Expect(2) = 5e-49
 Identities = 79/148 (53%), Positives = 109/148 (73%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K +LRY+K ++  GL       L + +FSDADWA  +DDRRSTGGF V++GPNL++W 
Sbjct: 850  AAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWS 909

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
            +RKQ  V+RSSTE+EY+A LA ATA+++WI++L  ELG+ +   + +WCDN+ A  + +N
Sbjct: 910  ARKQATVSRSSTEAEYKA-LANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTAN 968

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            PVFHA TKHIEVD HF+RE V  K ++V
Sbjct: 969  PVFHARTKHIEVDYHFVRERVARKLLQV 996



 Score = 52.8 bits (125), Expect(2) = 5e-49
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   LVLFIQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           LV  +QYLTLT PDLSF+VNK+ Q+LHA T +H+V AK
Sbjct: 815 LVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAK 852


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  169 bits (428), Expect(2) = 5e-49
 Identities = 82/150 (54%), Positives = 110/150 (73%)
 Frame = +2

Query: 101  FCACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLIT 280
            + A K +LRY+K ++  GL F     L +  FSDADWA S DDRRSTGGF V+LGPNL++
Sbjct: 633  WAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVS 692

Query: 281  WGSRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLA 460
            W +RKQ  V+RSSTE+EY+A LA ATA+++W+++L  ELGV     + +WCDN+ A  L+
Sbjct: 693  WSARKQATVSRSSTEAEYKA-LANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLS 751

Query: 461  SNPVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            +NP+FHA TKHIEVD HF+RE V  K +E+
Sbjct: 752  ANPIFHARTKHIEVDFHFVRERVARKLLEI 781



 Score = 51.2 bits (121), Expect(2) = 5e-49
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD+SF++NK+ QFLHAPT  H+   K
Sbjct: 604 LQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVK 637


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  164 bits (415), Expect(2) = 2e-48
 Identities = 77/150 (51%), Positives = 107/150 (71%)
 Frame = +2

Query: 101  FCACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLIT 280
            + A K +LRY+K ++  GL       L + +FSDADWA  +DDR STGGF V++GPNL++
Sbjct: 1248 WAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVS 1307

Query: 281  WGSRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLA 460
            W +RKQ  V+RSSTE+EY+A LA  TA+++WI++L  ELG+     + +WCDN+ A  + 
Sbjct: 1308 WSARKQATVSRSSTEAEYKA-LANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMT 1366

Query: 461  SNPVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            +NPVFHA TKHIEVD HF+RE V  K ++V
Sbjct: 1367 ANPVFHARTKHIEVDYHFVRERVARKFLQV 1396



 Score = 54.3 bits (129), Expect(2) = 2e-48
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +3

Query: 3    LVLFIQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            LV  +QYLTLT PDLSF+VNK+ Q+LHAPT +H+  AK
Sbjct: 1215 LVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAK 1252


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  167 bits (422), Expect(2) = 3e-48
 Identities = 81/150 (54%), Positives = 109/150 (72%)
 Frame = +2

Query: 101  FCACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLIT 280
            + A K +LRY+K ++  GL F     L +  FSDADWA S DDRRSTGGF V+LGPNL++
Sbjct: 1211 WAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVS 1270

Query: 281  WGSRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLA 460
            W +RKQ  V+RSS E+EY+A LA ATA+++W+++L  ELGV     + +WCDN+ A  L+
Sbjct: 1271 WSARKQATVSRSSIEAEYKA-LANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLS 1329

Query: 461  SNPVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            +NP+FHA TKHIEVD HF+RE V  K +E+
Sbjct: 1330 ANPIFHARTKHIEVDFHFVRERVARKLLEI 1359



 Score = 51.2 bits (121), Expect(2) = 3e-48
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QYLTLT PD+SF++NK+ QFLHAPT  H+   K
Sbjct: 1182 LQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVK 1215


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score =  167 bits (422), Expect(2) = 3e-48
 Identities = 81/150 (54%), Positives = 109/150 (72%)
 Frame = +2

Query: 101 FCACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLIT 280
           + A K +LRY+K ++  GL F     L +  FSDADWA S DDRRSTGGF V+LGPNL++
Sbjct: 203 WAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVS 262

Query: 281 WGSRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLA 460
           W +RKQ  V+RSS E+EY+A LA ATA+++W+++L  ELGV     + +WCDN+ A  L+
Sbjct: 263 WSARKQATVSRSSIEAEYKA-LANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLS 321

Query: 461 SNPVFHAHTKHIEVDVHFIREMVRNKDIEV 550
           +NP+FHA TKHIEVD HF+RE V  K +E+
Sbjct: 322 ANPIFHARTKHIEVDFHFVRERVARKLLEI 351



 Score = 51.2 bits (121), Expect(2) = 3e-48
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD+SF++NK+ QFLHAPT  H+   K
Sbjct: 174 LQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVK 207


>gb|EMT21953.1| ABC transporter C family member 10 [Aegilops tauschii]
          Length = 3041

 Score =  165 bits (417), Expect(2) = 3e-48
 Identities = 75/148 (50%), Positives = 107/148 (72%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K ++RY+K ++  GL F   +   + +FSD+DWA  +DDRRSTGGF V+ GPNLI+W 
Sbjct: 2603 AAKRIVRYVKNTMSLGLTFTKSSSTLVSAFSDSDWAGCIDDRRSTGGFAVFFGPNLISWC 2662

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
             +KQ  V+RSSTE+EY+A LA ATA++IW++S+  ELGV       +WCDN+ A  L++N
Sbjct: 2663 VKKQATVSRSSTEAEYKA-LANATAEIIWVQSMLRELGVKHTKTPCLWCDNLGATYLSAN 2721

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            PVFHA TKHI++D HF+RE V  + +++
Sbjct: 2722 PVFHARTKHIKIDFHFVRERVARRQLDI 2749



 Score = 52.8 bits (125), Expect(2) = 3e-48
 Identities = 25/38 (65%), Positives = 28/38 (73%)
 Frame = +3

Query: 3    LVLFIQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            LV  +QYLTLT PD+SF VNK+ QFLHAPT  H   AK
Sbjct: 2568 LVGALQYLTLTRPDISFAVNKVCQFLHAPTTVHLTAAK 2605


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  174 bits (441), Expect(2) = 4e-48
 Identities = 80/146 (54%), Positives = 112/146 (76%)
 Frame = +2

Query: 113  KMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWGSR 292
            K +LRY++G+L HGL  +  + L L  F DADWA+ +DDRRST G CV+LGPNLI+W S+
Sbjct: 1265 KRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSK 1324

Query: 293  KQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASNPV 472
            KQ +V+RSS E EYR+ LA   A++ W++SL +EL +PLA P ++WCDN+S + L++NPV
Sbjct: 1325 KQHIVSRSSIEIEYRS-LAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPV 1383

Query: 473  FHAHTKHIEVDVHFIREMVRNKDIEV 550
             HA TKHIE+D++F+RE V  K++EV
Sbjct: 1384 LHARTKHIELDLYFVREKVIRKEVEV 1409



 Score = 43.1 bits (100), Expect(2) = 4e-48
 Identities = 17/34 (50%), Positives = 27/34 (79%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QY+T+T P+LSF+VNK+ QF+  PT +H+ + K
Sbjct: 1232 LQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVK 1265


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  165 bits (417), Expect(2) = 6e-48
 Identities = 78/148 (52%), Positives = 107/148 (72%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K +LRY+K S+  GL     +   + +F DADWA S+DDRRSTGGF V+LG NL++W 
Sbjct: 1894 AVKRILRYVKFSVDLGLKISRSSSTLVSAFLDADWAGSIDDRRSTGGFAVFLGSNLVSWS 1953

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
            +RKQ  V+RSSTE+EY+A +A ATA+++W+++L  ELG+     + +WCDN+ A  LA N
Sbjct: 1954 ARKQATVSRSSTEAEYKA-VANATAEVMWVQALLKELGINSPETACMWCDNLGATYLAVN 2012

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            PVFHA TKHIE+D HF+RE V  K +E+
Sbjct: 2013 PVFHARTKHIEIDYHFVRERVARKQLEI 2040



 Score = 52.0 bits (123), Expect(2) = 6e-48
 Identities = 21/34 (61%), Positives = 28/34 (82%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QYLTLT PD+SF VNK+ QFLH+PT+ H++  K
Sbjct: 1863 LQYLTLTRPDISFAVNKVCQFLHSPTIDHWMAVK 1896


>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score =  167 bits (423), Expect(2) = 1e-47
 Identities = 81/148 (54%), Positives = 108/148 (72%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K +LRYIKG+   G+ F     + + +F+DADWA  VDDRRSTGGF V+LG NLI+W 
Sbjct: 832  AVKRILRYIKGTTKLGIKFSKSESMLVSAFADADWAGCVDDRRSTGGFAVFLGNNLISWT 891

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
            ++KQ  V+RSSTE+EY+A LA ATA++IW++ L  ELGV     + +WCDN+ A  L++N
Sbjct: 892  AKKQPTVSRSSTEAEYKA-LANATAEMIWVQKLLNELGVRHPPRARLWCDNLGATYLSAN 950

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            P+FHA TKHIE+D HF+RE V  K +EV
Sbjct: 951  PIFHARTKHIEIDFHFVRERVAQKLLEV 978



 Score = 48.5 bits (114), Expect(2) = 1e-47
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD+SF VNK+ QFLH+PT  H+   K
Sbjct: 801 LQYLTLTRPDISFAVNKVCQFLHSPTTIHWSAVK 834


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  164 bits (416), Expect(2) = 3e-47
 Identities = 80/150 (53%), Positives = 109/150 (72%)
 Frame = +2

Query: 101  FCACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLIT 280
            + A K +LRY+K     GL       + + ++SDADWA S+DDRRSTGGF V+LG NL++
Sbjct: 1065 WAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVS 1124

Query: 281  WGSRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLA 460
            W +RKQ  V+RSSTESEY+A LA ATA+++W+++L AEL V   + + +WCDN+ A  L+
Sbjct: 1125 WSARKQATVSRSSTESEYKA-LANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLS 1183

Query: 461  SNPVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            +NPVFHA TKHIEVD HF+RE V  K +E+
Sbjct: 1184 ANPVFHARTKHIEVDYHFVRERVSRKLLEI 1213



 Score = 50.1 bits (118), Expect(2) = 3e-47
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QYLTLT PD++F VNK+ QFLHAPT  H+   K
Sbjct: 1036 LQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVK 1069


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score =  172 bits (436), Expect(2) = 4e-47
 Identities = 82/146 (56%), Positives = 109/146 (74%)
 Frame = +2

Query: 113  KMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWGSR 292
            K +LRY+KG++  GLL  P T L +E FSDADW    DDRRS+ G+ VYLG NL++W S 
Sbjct: 1084 KRILRYLKGTMQDGLLLSPSTNLTIEGFSDADWGAQPDDRRSSSGYLVYLGGNLVSWSST 1143

Query: 293  KQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASNPV 472
            KQ VV+RSS +SEYRA LA+ATA++IW+++L  EL VP+ A  ++W DN+SA  +A NPV
Sbjct: 1144 KQKVVSRSSAKSEYRA-LALATAEIIWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPV 1202

Query: 473  FHAHTKHIEVDVHFIREMVRNKDIEV 550
            FHA TKHIE+D+HFIR+ V    I++
Sbjct: 1203 FHARTKHIEIDLHFIRDQVIRGKIQL 1228



 Score = 42.0 bits (97), Expect(2) = 4e-47
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QYLT+T PD++F VNK  QF+  PT  H++  K
Sbjct: 1051 LQYLTITRPDIAFAVNKTCQFMQQPTSAHWLSVK 1084


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  168 bits (425), Expect(2) = 5e-47
 Identities = 78/144 (54%), Positives = 107/144 (74%)
 Frame = +2

Query: 113  KMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWGSR 292
            K +LRY+KG+L  GL  +  +   + ++SDADWA+ +DD+RSTGGF V+LG NLI+W +R
Sbjct: 873  KRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLGSNLISWNAR 932

Query: 293  KQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASNPV 472
            KQ  V+RSSTE+EY+A LA ATA+++W++ L  ELG+    PS +WCDN+ A  L+ NPV
Sbjct: 933  KQATVSRSSTEAEYKA-LANATAEIMWVRKLLEELGISHPGPSQLWCDNIGATYLSVNPV 991

Query: 473  FHAHTKHIEVDVHFIREMVRNKDI 544
            FHA TKHIE+D HF+RE V  K +
Sbjct: 992  FHARTKHIEIDYHFVREQVAQKQL 1015



 Score = 45.8 bits (107), Expect(2) = 5e-47
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD+SF+VNK+ QFL  PT  H+   K
Sbjct: 840 LQYLTLTRPDISFSVNKVCQFLQNPTTVHWATVK 873


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  164 bits (416), Expect(2) = 6e-47
 Identities = 80/150 (53%), Positives = 107/150 (71%)
 Frame = +2

Query: 101  FCACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLIT 280
            + A K +LRY+K     GL       + +  +SDADWA ++DDRRSTGGF V+LG NL++
Sbjct: 1074 WAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVS 1133

Query: 281  WGSRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLA 460
            W ++KQ  V RSSTESEY+A LA ATA+++WI++L  EL VP    + +WCDN+ A  L+
Sbjct: 1134 WNAKKQATVPRSSTESEYKA-LANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLS 1192

Query: 461  SNPVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            SNPVFHA TKHIEVD HF+RE ++ K +EV
Sbjct: 1193 SNPVFHARTKHIEVDYHFVRERMQRKLLEV 1222



 Score = 48.9 bits (115), Expect(2) = 6e-47
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QYLTLT PD+ F VNK+ QFLHAPT+ H+   K
Sbjct: 1045 LQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMK 1078


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  174 bits (440), Expect(2) = 1e-46
 Identities = 82/148 (55%), Positives = 113/148 (76%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K +LRY+KG+++ GL FQP   + L+ +SDADWA+  DDRRST G+CV+LG NLI+W 
Sbjct: 1185 AVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWS 1244

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
            S KQ +V++SS ESEYR  L   TA+L+WI+SL  EL +P  +P I+WCDN SA  LA+N
Sbjct: 1245 SSKQRLVSKSSAESEYRG-LVSLTAELVWIQSLLQELCLP-TSPPILWCDNQSAAHLAAN 1302

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            PVFH+ +KHIE+D+HFIRE V  +++++
Sbjct: 1303 PVFHSRSKHIELDLHFIREKVLRQELQI 1330



 Score = 38.9 bits (89), Expect(2) = 1e-46
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QY+TLT PD++F VNK  QF+  P+  H++  K
Sbjct: 1154 LQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVK 1187


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score =  174 bits (440), Expect(2) = 1e-46
 Identities = 82/148 (55%), Positives = 113/148 (76%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K +LRY+KG+++ GL FQP   + L+ +SDADWA+  DDRRST G+CV+LG NLI+W 
Sbjct: 1054 AVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWS 1113

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
            S KQ +V++SS ESEYR  L   TA+L+WI+SL  EL +P  +P I+WCDN SA  LA+N
Sbjct: 1114 SSKQRLVSKSSAESEYRG-LVSLTAELVWIQSLLQELCLP-TSPPILWCDNQSAXHLAAN 1171

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            PVFH+ +KHIE+D+HFIRE V  +++++
Sbjct: 1172 PVFHSRSKHIELDLHFIREKVLRQELQI 1199



 Score = 38.9 bits (89), Expect(2) = 1e-46
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +3

Query: 15   IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
            +QY+TLT PD++F VNK  QF+  P+  H++  K
Sbjct: 1023 LQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVK 1056


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  164 bits (414), Expect(2) = 1e-46
 Identities = 78/148 (52%), Positives = 108/148 (72%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K ++RY++G++  GL  Q    + + +FSDADWA  VDDRRST GF V+LG NLI+W 
Sbjct: 884  AVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWS 943

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
             RKQ  V+RSSTE+EY+A LA ATA++IW+++L  ELG+   + + +WCDN+ A  L++N
Sbjct: 944  VRKQATVSRSSTEAEYKA-LANATAEVIWVQTLLKELGIQCPSMARLWCDNLGATYLSAN 1002

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            P+FHA TKHIEV  HF+RE V  K +E+
Sbjct: 1003 PIFHARTKHIEVYFHFVRERVAQKLLEI 1030



 Score = 48.5 bits (114), Expect(2) = 1e-46
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD++F++NK+ QFLH+PT+ H+   K
Sbjct: 853 LQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVK 886


>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  164 bits (414), Expect(2) = 1e-46
 Identities = 78/148 (52%), Positives = 108/148 (72%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K ++RY++G++  GL  Q    + + +FSDADWA  VDDRRST GF V+LG NLI+W 
Sbjct: 846  AVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWS 905

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
             RKQ  V+RSSTE+EY+A LA ATA++IW+++L  ELG+   + + +WCDN+ A  L++N
Sbjct: 906  VRKQATVSRSSTEAEYKA-LANATAEVIWVQTLLKELGIQCPSMARLWCDNLGATYLSAN 964

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            P+FHA TKHIEV  HF+RE V  K +E+
Sbjct: 965  PIFHARTKHIEVYFHFVRERVAQKLLEI 992



 Score = 48.5 bits (114), Expect(2) = 1e-46
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD++F++NK+ QFLH+PT+ H+   K
Sbjct: 815 LQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVK 848


>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1139

 Score =  164 bits (414), Expect(2) = 1e-46
 Identities = 78/148 (52%), Positives = 108/148 (72%)
 Frame = +2

Query: 107  ACKMVLRYIKGSLYHGLLFQPFTQL*LESFSDADWANSVDDRRSTGGFCVYLGPNLITWG 286
            A K ++RY++G++  GL  Q    + + +FSDADWA  VDDRRST GF V+LG NLI+W 
Sbjct: 852  AVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWS 911

Query: 287  SRKQDVVARSSTESEYRA*LAIATADLIWIKSLFAELGVPLAAPSIIWCDNVSAISLASN 466
             RKQ  V+RSSTE+EY+A LA ATA++IW+++L  ELG+   + + +WCDN+ A  L++N
Sbjct: 912  VRKQATVSRSSTEAEYKA-LANATAEVIWVQTLLKELGIQCPSMARLWCDNLGATYLSAN 970

Query: 467  PVFHAHTKHIEVDVHFIREMVRNKDIEV 550
            P+FHA TKHIEV  HF+RE V  K +E+
Sbjct: 971  PIFHARTKHIEVYFHFVRERVAQKLLEI 998



 Score = 48.5 bits (114), Expect(2) = 1e-46
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 15  IQYLTLTGPDLSFTVNKLSQFLHAPTVQHFVLAK 116
           +QYLTLT PD++F++NK+ QFLH+PT+ H+   K
Sbjct: 821 LQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVK 854