BLASTX nr result
ID: Rehmannia22_contig00016895
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00016895
(439 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY16927.1| RNA-binding family protein isoform 2, partial [Th... 106 3e-21
ref|XP_002337594.1| predicted protein [Populus trichocarpa] 100 2e-19
ref|XP_003605646.1| RNA-binding protein [Medicago truncatula] gi... 98 1e-18
ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isofo... 97 2e-18
ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citr... 97 2e-18
gb|ESW03309.1| hypothetical protein PHAVU_011G003400g [Phaseolus... 96 5e-18
gb|EOY16926.1| RNA-binding family protein isoform 1 [Theobroma c... 95 1e-17
ref|XP_006352100.1| PREDICTED: RNA-binding protein 24-A-like iso... 94 1e-17
ref|XP_002510776.1| RNA-binding region-containing protein, putat... 94 2e-17
ref|XP_006371379.1| hypothetical protein POPTR_0019s09640g [Popu... 93 3e-17
ref|XP_004506366.1| PREDICTED: RNA-binding protein Musashi homol... 93 3e-17
ref|XP_004250742.1| PREDICTED: uncharacterized protein LOC101249... 91 1e-16
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera] 91 2e-16
ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin... 89 8e-16
ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Popu... 86 5e-15
ref|XP_004141612.1| PREDICTED: uncharacterized protein LOC101221... 86 7e-15
ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isofo... 84 1e-14
ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citr... 84 1e-14
ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isofo... 83 3e-14
ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isofo... 83 4e-14
>gb|EOY16927.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
Length = 261
Score = 106 bits (265), Expect = 3e-21
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPPT 227
+YPYL F + GTGGATGY++ QGYGV YPHH FQYSA+NSTG YP HYG P+SLAP
Sbjct: 194 FYPYLQFGE--GTGGATGYTSGQGYGVQYPHHPFQYSAVNSTGS-YPQHYGAPMSLAPTP 250
Query: 228 PLQSGITMTLH 260
LQSG+TM LH
Sbjct: 251 ALQSGVTMALH 261
>ref|XP_002337594.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 100 bits (249), Expect = 2e-19
Identities = 51/80 (63%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYS--ASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAP 221
+YPYL F + TGGAT YS + Q YGV YPHHLFQYS+INST G YP HYG P+SLAP
Sbjct: 93 FYPYLQFGEGS-TGGATSYSNTSGQSYGVQYPHHLFQYSSINSTTGGYPQHYGAPMSLAP 151
Query: 222 PTPLQSGITMTLHA-TIPHR 278
L SG+TM L A IPHR
Sbjct: 152 TAALPSGVTMALQAPPIPHR 171
>ref|XP_003605646.1| RNA-binding protein [Medicago truncatula]
gi|355506701|gb|AES87843.1| RNA-binding protein
[Medicago truncatula]
Length = 272
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/80 (63%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAP 221
YYPYL + + GTGGAT GY++ QGYGV+YP +FQYS I STGG Y HYGTP+SLAP
Sbjct: 196 YYPYLQYGE--GTGGATTGGYTSGQGYGVNYPPQVFQYSPIASTGG-YAQHYGTPISLAP 252
Query: 222 -PTPLQSGITMTLHATIPHR 278
P L SG+TM L A IPHR
Sbjct: 253 SPAALPSGVTMALQAPIPHR 272
>ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Citrus sinensis]
gi|568849099|ref|XP_006478307.1| PREDICTED: RNA-binding
protein 24-like isoform X2 [Citrus sinensis]
Length = 286
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 224
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 266
Query: 225 TPLQSGIT-MTLHA-TIPHR 278
LQSG+T M LHA IPHR
Sbjct: 267 PALQSGVTNMALHAPPIPHR 286
>ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849101|ref|XP_006478308.1| PREDICTED: RNA-binding
protein 24-like isoform X3 [Citrus sinensis]
gi|557544073|gb|ESR55051.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 285
Score = 97.4 bits (241), Expect = 2e-18
Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 224
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 265
Query: 225 TPLQSGIT-MTLHA-TIPHR 278
LQSG+T M LHA IPHR
Sbjct: 266 PALQSGVTNMALHAPPIPHR 285
>gb|ESW03309.1| hypothetical protein PHAVU_011G003400g [Phaseolus vulgaris]
Length = 273
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/80 (60%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTG-GIYPPHYGTPVSLA 218
+YPYL + GG T GYS+ QGYGV+Y HLFQYS I ST G Y HYGTP+SLA
Sbjct: 194 FYPYLQYGGEGSGGGGTSGGYSSGQGYGVNYAPHLFQYSPIASTAAGAYAQHYGTPMSLA 253
Query: 219 PPTPLQSGITMTLHATIPHR 278
P LQSG+TM+L A IPHR
Sbjct: 254 PSPALQSGVTMSLQAPIPHR 273
>gb|EOY16926.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 344
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/64 (68%), Positives = 50/64 (78%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPPT 227
+YPYL F + GTGGATGY++ QGYGV YPHH FQYSA+NSTG YP HYG P+SLAP
Sbjct: 194 FYPYLQFGE--GTGGATGYTSGQGYGVQYPHHPFQYSAVNSTGS-YPQHYGAPMSLAPTP 250
Query: 228 PLQS 239
LQS
Sbjct: 251 ALQS 254
>ref|XP_006352100.1| PREDICTED: RNA-binding protein 24-A-like isoform X1 [Solanum
tuberosum]
Length = 264
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGI 182
S SG +YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAAAAGPGY 232
Query: 183 YPPHYGTPVSLAPPTPLQSGITMTLHATIPH 275
HYGTP+SLAP L SG+TMTL A IPH
Sbjct: 233 PTQHYGTPISLAPSPALHSGVTMTLRAPIPH 263
>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223551477|gb|EEF52963.1| RNA-binding
region-containing protein, putative [Ricinus communis]
Length = 259
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/74 (60%), Positives = 52/74 (70%)
Frame = +3
Query: 18 SGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYPPHY 197
SG +YPYL F + G+GGAT YS+SQ Y V YPHHLFQYSA+NSTGG YP H+
Sbjct: 181 SGMMSGAAAAFYPYLQFGE--GSGGATSYSSSQNYNVQYPHHLFQYSAVNSTGG-YPQHF 237
Query: 198 GTPVSLAPPTPLQS 239
G P+SLAP LQS
Sbjct: 238 GAPLSLAPTASLQS 251
>ref|XP_006371379.1| hypothetical protein POPTR_0019s09640g [Populus trichocarpa]
gi|550317135|gb|ERP49176.1| hypothetical protein
POPTR_0019s09640g [Populus trichocarpa]
Length = 271
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/79 (60%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSAS-QGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 224
+YPYL F + G G AT Y S Q YGV YP++LFQYSAINST G YP HYG P+SLAP
Sbjct: 194 FYPYLQFGEGSG-GAATSYPTSGQSYGVQYPYNLFQYSAINSTTGGYPQHYGAPMSLAPT 252
Query: 225 TPLQSGITMTLHA-TIPHR 278
L SG+T+ L A IPHR
Sbjct: 253 AALPSGVTLALQAPPIPHR 271
>ref|XP_004506366.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform X1
[Cicer arietinum]
Length = 272
Score = 93.2 bits (230), Expect = 3e-17
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTG 176
+ G++SG +YPYL + + G+GGAT GY++ QGYGV+Y +FQYS I STG
Sbjct: 183 AGGMMSGAAAAAAA-FYPYLQYGE--GSGGATTGGYTSGQGYGVNYQPQVFQYSPIASTG 239
Query: 177 GIYPPHYGTPVSLAPPTPLQSGITMTLHATIPHR 278
G Y HYGTP+SLAP LQSG+TM A IPHR
Sbjct: 240 G-YAQHYGTPISLAPSPALQSGVTMAPQAQIPHR 272
>ref|XP_004250742.1| PREDICTED: uncharacterized protein LOC101249883 isoform 1 [Solanum
lycopersicum]
Length = 266
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/93 (51%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGI 182
S SG +YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAAAAAAGP 232
Query: 183 -YPP-HYGTPVSLAPPTPLQSGITMTLHATIPH 275
YP HYGTP+SLAP L SG+TM+L A IPH
Sbjct: 233 GYPTQHYGTPISLAPSPALHSGVTMSLRAPIPH 265
>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
Length = 269
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/68 (66%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT---GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLA 218
+YPYL F + G+GGA GY++ QGYGV YPHHL QYSAINSTGG YP HYG P+SLA
Sbjct: 193 FYPYLQFGE--GSGGAAASGGYTSGQGYGVQYPHHLVQYSAINSTGG-YPQHYGAPMSLA 249
Query: 219 PPTPLQSG 242
P LQSG
Sbjct: 250 PTPALQSG 257
>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
gi|297734754|emb|CBI16988.3| unnamed protein product
[Vitis vinifera]
Length = 264
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT---GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLA 218
+YPYL F + G+GGA GY++ QGYGV YPHHL QYSAINSTGG YP HYG P+SLA
Sbjct: 193 FYPYLQFGE--GSGGAAASGGYTSGQGYGVQYPHHLVQYSAINSTGG-YPQHYGAPMSLA 249
Query: 219 PPTPLQS 239
P LQS
Sbjct: 250 PTPALQS 256
>ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Populus trichocarpa]
gi|222858241|gb|EEE95788.1| hypothetical protein
POPTR_0013s09120g [Populus trichocarpa]
Length = 266
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/66 (63%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYS--ASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAP 221
+YPYL F + TGGAT YS + Q YGV YPHHLFQYS+INST G YP HYG P+SLAP
Sbjct: 194 FYPYLQFGEGS-TGGATSYSNTSGQSYGVQYPHHLFQYSSINSTTGGYPQHYGAPMSLAP 252
Query: 222 PTPLQS 239
L S
Sbjct: 253 TAALPS 258
>ref|XP_004141612.1| PREDICTED: uncharacterized protein LOC101221767 [Cucumis sativus]
Length = 274
Score = 85.5 bits (210), Expect = 7e-15
Identities = 46/81 (56%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYS-AINSTGG-IYPPHYGTPVSLAP 221
+YPY F + G GG S QGYGV YPHHLFQYS AINST +P HY P P
Sbjct: 198 FYPYFQFGEGSGGGG----SGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLP 253
Query: 222 PTP--LQSGITMTLHATIPHR 278
PTP L SG+TM L A IPHR
Sbjct: 254 PTPPTLPSGVTMALPAPIPHR 274
>ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isoform X4 [Citrus sinensis]
Length = 279
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 224
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 266
Query: 225 TPLQS 239
LQS
Sbjct: 267 PALQS 271
>ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849105|ref|XP_006478310.1| PREDICTED: RNA-binding
protein 24-like isoform X5 [Citrus sinensis]
gi|557544074|gb|ESR55052.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 278
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 224
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 265
Query: 225 TPLQS 239
LQS
Sbjct: 266 PALQS 270
>ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
Length = 272
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
Frame = +3
Query: 48 YYPYLNFNDHQGTGGATG-YSASQGYGVHYP--HHLFQYSAINSTGGI---YPPHYGTP- 206
+YPYL + + G GG +G YS+ QGYGV+YP HLFQYS I ST Y HYGTP
Sbjct: 188 FYPYLQYGEGSGGGGTSGGYSSGQGYGVNYPPQAHLFQYSPIASTAAATAGYAQHYGTPA 247
Query: 207 VSLAPPTPLQSGITM-TLHATIPHR 278
+SLAP LQSG+TM L A IPHR
Sbjct: 248 MSLAPSPALQSGVTMPPLQAPIPHR 272
>ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
Length = 272
Score = 82.8 bits (203), Expect = 4e-14
Identities = 50/95 (52%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Frame = +3
Query: 3 SNGLVSGXXXXXXXXYYPYLNFNDHQGTGGATGYSASQGYGVHYPH--HLFQYSAINSTG 176
+ G++SG +YPYL + +G+GG G ++ QGYGV+YP HLFQYS I ST
Sbjct: 187 AGGMMSGGAA-----FYPYLQYGG-EGSGG--GGTSGQGYGVNYPPQAHLFQYSPIASTA 238
Query: 177 GIYPPHYGTP-VSLAPPTPLQSGITMTLHATIPHR 278
G Y HYGTP +SLAP LQSG+TM L A IPHR
Sbjct: 239 G-YAQHYGTPTMSLAPSPALQSGVTMPLQAPIPHR 272