BLASTX nr result

ID: Rehmannia22_contig00016791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00016791
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS72235.1| hypothetical protein M569_02522 [Genlisea aurea]        79   6e-13
ref|XP_004240565.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_004240564.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006355855.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08

>gb|EPS72235.1| hypothetical protein M569_02522 [Genlisea aurea]
          Length = 692

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 47/98 (47%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = +3

Query: 60  MASSTPPPHCTLTTTKPYXXXXXXXXXXXXXXXXXXXXXX-WTPQKVYLNXXXXXXXXXX 236
           MASSTPPPHC LTT KPY                       WTPQKV LN          
Sbjct: 1   MASSTPPPHCALTTAKPYPGHHHFNHPQNHRRSTSNQQRQNWTPQKVSLNNPAASHASAG 60

Query: 237 XXXXXXXXXXXXKFPCLSAADFSGRRSTRFVSKMHFGR 350
                        FPCLS ADFS RRSTRFVSKMHFGR
Sbjct: 61  AVVD---------FPCLSVADFSSRRSTRFVSKMHFGR 89


>ref|XP_004240565.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like isoform 2 [Solanum lycopersicum]
          Length = 829

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/97 (43%), Positives = 45/97 (46%)
 Frame = +3

Query: 60  MASSTPPPHCTLTTTKPYXXXXXXXXXXXXXXXXXXXXXXWTPQKVYLNXXXXXXXXXXX 239
           MASSTPPPHC LTT+KPY                      W+ QKV LN           
Sbjct: 1   MASSTPPPHCALTTSKPYQPQTHSHPHPNHRNNHQRH---WSSQKVSLNPPRNPNHPSQT 57

Query: 240 XXXXXXXXXXXKFPCLSAADFSGRRSTRFVSKMHFGR 350
                       F    +ADFSGRRSTRFVSKMHFGR
Sbjct: 58  PNFLSLSSSKSDF----SADFSGRRSTRFVSKMHFGR 90


>ref|XP_004240564.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like isoform 1 [Solanum lycopersicum]
          Length = 841

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/97 (43%), Positives = 45/97 (46%)
 Frame = +3

Query: 60  MASSTPPPHCTLTTTKPYXXXXXXXXXXXXXXXXXXXXXXWTPQKVYLNXXXXXXXXXXX 239
           MASSTPPPHC LTT+KPY                      W+ QKV LN           
Sbjct: 1   MASSTPPPHCALTTSKPYQPQTHSHPHPNHRNNHQRH---WSSQKVSLNPPRNPNHPSQT 57

Query: 240 XXXXXXXXXXXKFPCLSAADFSGRRSTRFVSKMHFGR 350
                       F    +ADFSGRRSTRFVSKMHFGR
Sbjct: 58  PNFLSLSSSKSDF----SADFSGRRSTRFVSKMHFGR 90


>ref|XP_006355855.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Solanum tuberosum]
          Length = 848

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/103 (42%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
 Frame = +3

Query: 60  MASSTPPPHCTLTTTKPYXXXXXXXXXXXXXXXXXXXXXXWTPQKVYLNXXXXXXXXXXX 239
           MASSTPPPHC LTT+KPY                      W+ QKV LN           
Sbjct: 1   MASSTPPPHCALTTSKPY-HPHPLTQTHSHPNHRNNHQRHWSSQKVSLN-----RPAPPR 54

Query: 240 XXXXXXXXXXXKFPCLS------AADFSGRRSTRFVSKMHFGR 350
                       F  LS      +ADFSGRRSTRFVSKMHFGR
Sbjct: 55  NATHPPPSQTPNFLSLSSSKSDFSADFSGRRSTRFVSKMHFGR 97


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