BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00016465
         (1438 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   366   e-140
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   362   e-138
ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like...   355   e-136
gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus...   350   e-136
gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma ...   363   e-136
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   356   e-134
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           353   e-134
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   353   e-134
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   355   e-134
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   355   e-134
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   357   e-133
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              365   e-133
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   351   e-133
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   363   e-133
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   345   e-131
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   352   e-131
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   352   e-130
ref|XP_006651272.1| PREDICTED: RNA pseudouridine synthase 5-like...   327   e-124
sp|Q0DST9.2|PUS5_ORYSJ RecName: Full=RNA pseudouridine synthase ...   324   e-123
ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutr...   336   e-122

>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  366 bits (939), Expect(2) = e-140
 Identities = 182/264 (68%), Positives = 215/264 (81%), Gaps = 1/264 (0%)
 Frame = -3

Query: 1316 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 1137
            ++    G PWPE NDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2    SRQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITV 61

Query: 1136 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 957
            D  VVTDP  +LR G +LVYHRLPWKEPDAP+ +++LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 62   DAKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLF 121

Query: 956  QQRTVLTQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 780
            QQRTVLTQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A+  LA++FADG
Sbjct: 122  QQRTVLTQLQWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181

Query: 779  TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 600
            TS +G  R  DT Q+  + I K+YRAL SG+I  D+V IDQPIG+VKYPGVAKGLYVAS 
Sbjct: 182  TSRIGGKR--DTNQELGK-IAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238

Query: 599  SGKPALSKVVVLERNLLSNSTLVQ 528
            SGKPALS V +LERN+  NSTLVQ
Sbjct: 239  SGKPALSVVDILERNVKENSTLVQ 262



 Score =  160 bits (404), Expect(2) = e-140
 Identities = 72/100 (72%), Positives = 86/100 (86%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           V+IQSGRPHQIRIHLSFIGHPL+GDPLY+  GQPK  D++ +D+SFA+DGGY RP KPVP
Sbjct: 263 VKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKCLDYDFLDDSFAEDGGYPRPPKPVP 322

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK 199
           GDCGY+LHAH ++ +HP+TNEI EI APLP  LQT EE+K
Sbjct: 323 GDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTHEEAK 362


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
            gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
            [Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
            pseudourine synthase [Medicago truncatula]
            gi|355504493|gb|AES85696.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 371

 Score =  362 bits (928), Expect(2) = e-138
 Identities = 183/259 (70%), Positives = 212/259 (81%), Gaps = 2/259 (0%)
 Frame = -3

Query: 1298 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 1119
            G PWPEFNDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+D  VVT
Sbjct: 8    GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67

Query: 1118 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 939
            DP  ILR G +LVYHR+PWKEPDAP+ +E+LYED+D+IALNKPSGLQVLPGGLFQQRTVL
Sbjct: 68   DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127

Query: 938  TQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV-G 765
            TQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS + G
Sbjct: 128  TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEG 187

Query: 764  VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 585
                N    K    I K+YRAL SG+I  D+V I+QPIG+VKYPGVAKGLYVAS SGKPA
Sbjct: 188  KGHTNQELGK----IAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPA 243

Query: 584  LSKVVVLERNLLSNSTLVQ 528
            LS V VLERN+  NSTLVQ
Sbjct: 244  LSVVHVLERNVKENSTLVQ 262



 Score =  159 bits (402), Expect(2) = e-138
 Identities = 74/102 (72%), Positives = 85/102 (83%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           V+IQSGRPHQIRIHLSFIGHPL+GDPLY+  GQPK  D + +DESFA+DGGY RP KPVP
Sbjct: 264 VKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFLDESFAEDGGYTRPSKPVP 323

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESKAK 193
           GDCGYHLHAH +  SHP+TNEI E+ APLP  LQT EE+ A+
Sbjct: 324 GDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEEAIAQ 365


>ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like [Glycine max]
          Length = 371

 Score =  355 bits (910), Expect(2) = e-136
 Identities = 179/264 (67%), Positives = 216/264 (81%), Gaps = 1/264 (0%)
 Frame = -3

Query: 1316 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 1137
            T    FG PWPE NDG+ Y D++R SDAGATLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2    TSRKKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITV 61

Query: 1136 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 957
            DG VVTD   +LR G +L+YHRLPWKEPDAP+++++LYED+D+IALNKPSGLQVLPGGL+
Sbjct: 62   DGGVVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLY 121

Query: 956  QQRTVLTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 780
            QQRT+LTQLQ  A+N  T   ++  HPVPVHRLGRGTSG+LLCAKTK+A++RLA+ FADG
Sbjct: 122  QQRTILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADG 181

Query: 779  TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 600
            TS VG  R  DT+Q+  + I K+YRAL SG++  D+V I+QPIG+VKYPGVAKGLYVAS 
Sbjct: 182  TSHVGGKR--DTKQELGK-IAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASE 238

Query: 599  SGKPALSKVVVLERNLLSNSTLVQ 528
            SGKPALS V +LE N+  NSTLVQ
Sbjct: 239  SGKPALSVVDILETNIQENSTLVQ 262



 Score =  160 bits (404), Expect(2) = e-136
 Identities = 74/100 (74%), Positives = 83/100 (83%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           V+IQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D + VDESFA+DGGY+RP KPVP
Sbjct: 263 VKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDFVDESFAEDGGYQRPTKPVP 322

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK 199
           GDCGY+LHAH +V SHP TNE+ EI APLP  L T EE+K
Sbjct: 323 GDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEAK 362


>gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  350 bits (897), Expect(2) = e-136
 Identities = 179/258 (69%), Positives = 213/258 (82%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FG PWPE NDG+ Y D++R SD+G TLI+FY  KYKSSAPL GWLQRI + QIT DG VV
Sbjct: 7    FGIPWPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGRVV 66

Query: 1121 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 942
            TD   +LR G +LVYHRLPWKEPDAP+++E+LYED+++IALNKPSGLQVLPGGLFQQRTV
Sbjct: 67   TDSSTVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQRTV 126

Query: 941  LTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGV 762
            LTQLQ  A NL    +++PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +G 
Sbjct: 127  LTQLQWEA-NL----HKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIGG 181

Query: 761  CRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPAL 582
             R  DT  +  + I K+YR LASG++  DEV I+QPIG+VKYPGVAKGLYVAS SGKPAL
Sbjct: 182  KR--DTNGEIGK-IAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPAL 238

Query: 581  SKVVVLERNLLSNSTLVQ 528
            S V +LERN+  NSTLVQ
Sbjct: 239  SVVGILERNVQENSTLVQ 256



 Score =  165 bits (417), Expect(2) = e-136
 Identities = 76/100 (76%), Positives = 87/100 (87%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           V+IQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D +S+DESFA+DGGY+RP KPVP
Sbjct: 257 VKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLDCDSIDESFAEDGGYQRPTKPVP 316

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK 199
           GDCGY+LHAH +V SHPLTNE+ EI+APLP  LQT EE+K
Sbjct: 317 GDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPEEAK 356


>gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 378

 Score =  363 bits (932), Expect(2) = e-136
 Identities = 180/264 (68%), Positives = 212/264 (80%), Gaps = 1/264 (0%)
 Frame = -3

Query: 1316 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 1137
            T+ + FG PWPE NDG++Y D+++PSD+  TLI+FYS KYK+SAP  GWLQRI N QI++
Sbjct: 7    TQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISV 66

Query: 1136 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 957
            DG VV DP  ILRG  ELVYHRLPWKEPDAP+ LE+LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 67   DGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLF 126

Query: 956  QQRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 780
            QQRTVLTQL       T+S   QE HPVPVHRLGRGTSG+LLCAKTK AK+ LAA+FADG
Sbjct: 127  QQRTVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADG 186

Query: 779  TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 600
            TS +G       Q   TR I+K+YRAL +G++ ED+V I+QPIG+V+YPGVAKGLYVASP
Sbjct: 187  TSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASP 246

Query: 599  SGKPALSKVVVLERNLLSNSTLVQ 528
            SGKPALSKV VLE++   N TLVQ
Sbjct: 247  SGKPALSKVEVLEKDEQQNHTLVQ 270



 Score =  150 bits (379), Expect(2) = e-136
 Identities = 68/103 (66%), Positives = 83/103 (80%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           V+I+SGRPHQIRIHLSFIGHPL+GDPLY   GQP+  D E VDE++AQDGGY+RP  PVP
Sbjct: 271 VQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDSEFVDENYAQDGGYQRPVNPVP 330

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESKAKK 190
           GDCGY+LHAH ++ SHP T+EI  I+APLP  LQT +E +  +
Sbjct: 331 GDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQDEVRRSR 373


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  356 bits (914), Expect(2) = e-134
 Identities = 181/260 (69%), Positives = 210/260 (80%), Gaps = 2/260 (0%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FG PWP+ N+G+ Y D++RP+DAG TLI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 37   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 96

Query: 1121 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 942
              P   LR G ELVYHRLPW+EPDAPYLLE+L+ED+ +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 97   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 156

Query: 941  LTQLQRHADNL--TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 768
            LTQLQ HA  L  T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+GTS V
Sbjct: 157  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 216

Query: 767  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 588
               +  +++    R I K+YRAL SGV+  DE  I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 217  EE-KCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKP 275

Query: 587  ALSKVVVLERNLLSNSTLVQ 528
            ALS V VLER+  SN TLVQ
Sbjct: 276  ALSSVRVLERDSESNCTLVQ 295



 Score =  151 bits (381), Expect(2) = e-134
 Identities = 69/103 (66%), Positives = 84/103 (81%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIG+PL+GDPLY + GQPK    E +DESF +DGGY+RPE PVP
Sbjct: 296 VEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELLDESFEKDGGYQRPENPVP 355

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESKAKK 190
           GDCGY+LHAH +   HP+TNE+ +I+APLP  LQT +E +A +
Sbjct: 356 GDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDEREANQ 398


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  353 bits (907), Expect(2) = e-134
 Identities = 178/259 (68%), Positives = 210/259 (81%), Gaps = 1/259 (0%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FG  WPE NDG++Y D++R SD+ +TLI FYSRKYK+SAPL GWLQRI N QIT++G VV
Sbjct: 14   FGFSWPELNDGLFYSDVVRTSDSESTLIQFYSRKYKNSAPLQGWLQRIRNGQITVNGRVV 73

Query: 1121 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 942
             DP  IL  G ELVYHRLPWKEP APY+LEILYED D+IAL+KPS LQVLPGGLFQQRTV
Sbjct: 74   RDPDTILSIGSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSELQVLPGGLFQQRTV 133

Query: 941  LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 765
            LTQLQ  A   ++S    EP+PVPVHRLGRGTSG+LLCAKTK AK++LAA+FADGTS VG
Sbjct: 134  LTQLQWRATKQSSSLVCCEPNPVPVHRLGRGTSGILLCAKTKFAKTQLAAYFADGTSYVG 193

Query: 764  VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 585
                N+ +  A R I K+YRAL +G++ ED+V ++QPIG V+YPGVAKGLYVASPSGKPA
Sbjct: 194  GNSKNNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYVASPSGKPA 253

Query: 584  LSKVVVLERNLLSNSTLVQ 528
            LSKV VLER++  N TLV+
Sbjct: 254  LSKVEVLERDVEKNCTLVK 272



 Score =  154 bits (388), Expect(2) = e-134
 Identities = 73/105 (69%), Positives = 83/105 (79%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIGHPL+GDPLY   G+P+  D E VD SFAQDGG+ RP KPVP
Sbjct: 273 VEIQSGRPHQIRIHLSFIGHPLLGDPLYVVGGRPRCFDPEFVDGSFAQDGGFPRPAKPVP 332

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESKAKKVL 184
           GDCGY LHAHHV  SHP TNE+ EI+APLP  L T +E++   V+
Sbjct: 333 GDCGYTLHAHHVSLSHPTTNEVIEITAPLPPVLWTRQEAQETSVI 377


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
            vesca]
          Length = 375

 Score =  353 bits (905), Expect(2) = e-134
 Identities = 175/260 (67%), Positives = 207/260 (79%), Gaps = 1/260 (0%)
 Frame = -3

Query: 1304 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 1125
            +FG PWP+ NDG+ Y D+++ SD+  TLI+FYS KYKSSAPL GWLQRI N QIT+DG V
Sbjct: 12   TFGLPWPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRIRNGQITVDGEV 71

Query: 1124 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 945
            V D   ILR G ELVYHRLPW EPDAPYLLE+LYED+D+IALNKP GLQVLPGGLFQQRT
Sbjct: 72   VRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLFQQRT 131

Query: 944  VLTQ-LQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 768
            VLTQ L R +        Q+ H VPVHRLGRGTSG+LLCAKTK AK++LAA+FADGTS +
Sbjct: 132  VLTQLLWRESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTSHI 191

Query: 767  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 588
            G     +T+   TR ITK+YRAL +G+I EDEV + QPIG V+YPGVAKGLY+ASP+GKP
Sbjct: 192  GDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAGKP 251

Query: 587  ALSKVVVLERNLLSNSTLVQ 528
            ALSKV VL+R++  N T+VQ
Sbjct: 252  ALSKVEVLDRDIQKNHTIVQ 271



 Score =  154 bits (389), Expect(2) = e-134
 Identities = 72/98 (73%), Positives = 82/98 (83%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK    + VDESFA DGG++RP KPVP
Sbjct: 272 VEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPKCLGSDLVDESFADDGGFKRPTKPVP 331

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEE 205
           GDCGY+LHAH VV SHP +NE+ +I+APLPL L+T EE
Sbjct: 332 GDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVLRTREE 369


>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
            sinensis]
          Length = 390

 Score =  355 bits (911), Expect(2) = e-134
 Identities = 177/259 (68%), Positives = 207/259 (79%), Gaps = 1/259 (0%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FGEPWP+ N+G+ Y D++ PSD+  TLI+FYS K+K+SAPL GWLQRI N QIT+DG VV
Sbjct: 13   FGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVV 72

Query: 1121 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 942
             DP IIL  G ELVYHRLPWKEPD PYLLE+ YED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 73   NDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTV 132

Query: 941  LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 765
            L QLQ  A   ++S   Q  HPVPVHRLGRGTSG+LLCAKTK+AK+ +AA+FAD TS V 
Sbjct: 133  LKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD 192

Query: 764  VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 585
                N   + + R ITK+YRAL  G++ ED+V I QPIG+V+YPGVAKGLYVASPSGKPA
Sbjct: 193  A--DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPA 250

Query: 584  LSKVVVLERNLLSNSTLVQ 528
            LSKV VLER++  N TLVQ
Sbjct: 251  LSKVDVLERDVQRNCTLVQ 269



 Score =  151 bits (382), Expect(2) = e-134
 Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHL+F+GHPL+GDPLY   GQPK  D E  D +FAQDGGYERP  PVP
Sbjct: 271 VEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFADGTFAQDGGYERPVNPVP 330

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK-AKKVL*EQRLAGVSI 154
           GDCGY+LHA+ +  SHP TNE+ +I+APLP  L+T EE +   K +  +R+ G+ I
Sbjct: 331 GDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGREVDKSVGSERIRGIHI 386


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
            sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED: RNA
            pseudouridine synthase 5-like isoform X3 [Citrus
            sinensis]
          Length = 389

 Score =  355 bits (911), Expect(2) = e-134
 Identities = 177/259 (68%), Positives = 207/259 (79%), Gaps = 1/259 (0%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FGEPWP+ N+G+ Y D++ PSD+  TLI+FYS K+K+SAPL GWLQRI N QIT+DG VV
Sbjct: 13   FGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVV 72

Query: 1121 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 942
             DP IIL  G ELVYHRLPWKEPD PYLLE+ YED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 73   NDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTV 132

Query: 941  LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 765
            L QLQ  A   ++S   Q  HPVPVHRLGRGTSG+LLCAKTK+AK+ +AA+FAD TS V 
Sbjct: 133  LKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD 192

Query: 764  VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 585
                N   + + R ITK+YRAL  G++ ED+V I QPIG+V+YPGVAKGLYVASPSGKPA
Sbjct: 193  A--DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPA 250

Query: 584  LSKVVVLERNLLSNSTLVQ 528
            LSKV VLER++  N TLVQ
Sbjct: 251  LSKVDVLERDVQRNCTLVQ 269



 Score =  151 bits (382), Expect(2) = e-134
 Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHL+F+GHPL+GDPLY   GQPK  D E  D +FAQDGGYERP  PVP
Sbjct: 270 VEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEFADGTFAQDGGYERPVNPVP 329

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK-AKKVL*EQRLAGVSI 154
           GDCGY+LHA+ +  SHP TNE+ +I+APLP  L+T EE +   K +  +R+ G+ I
Sbjct: 330 GDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGREVDKSVGSERIRGIHI 385


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
            gi|222851845|gb|EEE89392.1| hypothetical protein
            POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  357 bits (915), Expect(2) = e-133
 Identities = 176/263 (66%), Positives = 212/263 (80%), Gaps = 2/263 (0%)
 Frame = -3

Query: 1310 MVSFGEPWPEFNDGIYYRDLLRPS-DAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITID 1134
            + SFG PWP+ N+G++Y D++  S D+G TLI FYS KYK+SAPL GWLQRIHN QITID
Sbjct: 11   LCSFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITID 70

Query: 1133 GCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQ 954
            G VV +PK ILR G ELVYHRLPW+EPDAPYLL++LYED+D++ALNKP GLQVLPGGLFQ
Sbjct: 71   GEVVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQ 130

Query: 953  QRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGT 777
            QRTVL QLQ  A   ++S   Q  HPVPVHRLGRGTSG+LLCAKTK+AK+ LAA+FADGT
Sbjct: 131  QRTVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGT 190

Query: 776  SAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPS 597
            S +G     + +Q   R I+K+YRAL +G++ +D++ I QPIG ++YPGVAKGLYVASPS
Sbjct: 191  SLIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPS 250

Query: 596  GKPALSKVVVLERNLLSNSTLVQ 528
            GKPALSKV VLER+   N TLVQ
Sbjct: 251  GKPALSKVEVLERDSQLNQTLVQ 273



 Score =  148 bits (373), Expect(2) = e-133
 Identities = 70/101 (69%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEI+SGRPHQIRIHLSFIGHPL+GDPLY   GQP   D E  DESFA+DGGYERP KPVP
Sbjct: 274 VEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDSEHEDESFAEDGGYERPAKPVP 333

Query: 318 GDCGYHLHAHHVVFSHPLTNE-INEISAPLPLNLQTVEESK 199
           GDCGY+LHAH +V SHP  NE + +I+APLP  L+T  E++
Sbjct: 334 GDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQAETE 374


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  365 bits (936), Expect(2) = e-133
 Identities = 178/260 (68%), Positives = 216/260 (83%), Gaps = 1/260 (0%)
 Frame = -3

Query: 1304 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 1125
            +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4    TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 1124 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 945
            VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64   VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 944  VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 768
            VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124  VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 767  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 588
            G  R  D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGKP
Sbjct: 184  GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243

Query: 587  ALSKVVVLERNLLSNSTLVQ 528
            ALSKV +LER++  +  +VQ
Sbjct: 244  ALSKVSILERDVQGDHMIVQ 263



 Score =  139 bits (351), Expect(2) = e-133
 Identities = 63/81 (77%), Positives = 68/81 (83%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D E  +ES+A DGGY+RP KPVP
Sbjct: 264 VEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPVKPVP 323

Query: 318 GDCGYHLHAHHVVFSHPLTNE 256
           GDCGYHLHAH +V SHP TNE
Sbjct: 324 GDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
            tuberosum]
          Length = 374

 Score =  351 bits (900), Expect(2) = e-133
 Identities = 178/260 (68%), Positives = 208/260 (80%), Gaps = 2/260 (0%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FG  WPE N+G+ Y D++RP+DAG  LI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1121 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 942
              P   LR G ELVYHRLPW+EPDAPYLLE+L++D+ +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 74   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTV 133

Query: 941  LTQLQRHA--DNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 768
            LTQLQ HA     T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+GTS V
Sbjct: 134  LTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193

Query: 767  GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 588
               +  +++    R I K+YRAL SGV+  DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 194  -EDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 252

Query: 587  ALSKVVVLERNLLSNSTLVQ 528
            ALS V VLER+  +N TLVQ
Sbjct: 253  ALSSVRVLERDSENNCTLVQ 272



 Score =  152 bits (383), Expect(2) = e-133
 Identities = 70/101 (69%), Positives = 83/101 (82%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIG+PL+GDPLY + GQPK    E +DESF +DGGY+RPE PVP
Sbjct: 273 VEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELMDESFEKDGGYQRPENPVP 332

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESKA 196
           GDCGY+LHAH +   HP+TNE+ +I+APLP  LQT EE +A
Sbjct: 333 GDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREEREA 373


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  363 bits (932), Expect(2) = e-133
 Identities = 178/261 (68%), Positives = 218/261 (83%), Gaps = 2/261 (0%)
 Frame = -3

Query: 1304 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 1125
            +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4    TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 1124 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 945
            VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64   VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 944  VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 768
            VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124  VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 767  GVCRMN-DTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 591
            G  R++ D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGK
Sbjct: 184  GGNRLDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGK 243

Query: 590  PALSKVVVLERNLLSNSTLVQ 528
            PALSKV +LER++  +  +VQ
Sbjct: 244  PALSKVSILERDVQGDHMIVQ 264



 Score =  139 bits (351), Expect(2) = e-133
 Identities = 63/81 (77%), Positives = 68/81 (83%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D E  +ES+A DGGY+RP KPVP
Sbjct: 265 VEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPVKPVP 324

Query: 318 GDCGYHLHAHHVVFSHPLTNE 256
           GDCGYHLHAH +V SHP TNE
Sbjct: 325 GDCGYHLHAHQLVLSHPTTNE 345


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
            tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
            RNA pseudouridine synthase 5-like isoform X2 [Solanum
            tuberosum]
          Length = 379

 Score =  345 bits (884), Expect(2) = e-131
 Identities = 178/265 (67%), Positives = 208/265 (78%), Gaps = 7/265 (2%)
 Frame = -3

Query: 1301 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 1122
            FG  WPE N+G+ Y D++RP+DAG  LI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1121 TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 957
              P   L     R G ELVYHRLPW+EPDAPYLLE+L++D+ +I +NKPSGLQVLPGGL+
Sbjct: 74   ILPDTELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLY 133

Query: 956  QQRTVLTQLQRHA--DNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 783
            QQRTVLTQLQ HA     T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+
Sbjct: 134  QQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAE 193

Query: 782  GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 603
            GTS V   +  +++    R I K+YRAL SGV+  DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 194  GTSVV-EDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVAS 252

Query: 602  PSGKPALSKVVVLERNLLSNSTLVQ 528
            PSGKPALS V VLER+  +N TLVQ
Sbjct: 253  PSGKPALSSVRVLERDSENNCTLVQ 277



 Score =  152 bits (383), Expect(2) = e-131
 Identities = 70/101 (69%), Positives = 83/101 (82%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLSFIG+PL+GDPLY + GQPK    E +DESF +DGGY+RPE PVP
Sbjct: 278 VEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPELMDESFEKDGGYQRPENPVP 337

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESKA 196
           GDCGY+LHAH +   HP+TNE+ +I+APLP  LQT EE +A
Sbjct: 338 GDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREEREA 378


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  352 bits (904), Expect(2) = e-131
 Identities = 172/257 (66%), Positives = 212/257 (82%)
 Frame = -3

Query: 1298 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 1119
            G PWP+ NDG++Y D+++P D+G +LI FYS KYKSSAPL GWLQRI N+QITIDG V+T
Sbjct: 11   GIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVIT 70

Query: 1118 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 939
            DP+ ILR G +LVY RLPWKEPD PYLLEILYEDN++IALNKPSGLQVLPGG+FQQRTVL
Sbjct: 71   DPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVL 130

Query: 938  TQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVC 759
            TQLQ  +   + S  +E HPVPVHRLGRGTSG+LLCAKTK+A+++ AA+FA+GTS+V   
Sbjct: 131  TQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRN 190

Query: 758  RMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALS 579
            R +  ++   R I+K+YRAL +G+I +DEV +DQPIG ++YPGVA+GLYVA+PSGKPA S
Sbjct: 191  RNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACS 250

Query: 578  KVVVLERNLLSNSTLVQ 528
            KV VLER+  S  TLVQ
Sbjct: 251  KVNVLERDEQSKHTLVQ 267



 Score =  144 bits (363), Expect(2) = e-131
 Identities = 68/100 (68%), Positives = 79/100 (79%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLS IGHPLVGDPLY   GQP     E V++SFA+DGGYERP KPVP
Sbjct: 268 VEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVP 327

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK 199
           GDCGY+LHAH ++  HP TNE+ +I APLP  L+T  E++
Sbjct: 328 GDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  352 bits (904), Expect(2) = e-130
 Identities = 172/257 (66%), Positives = 212/257 (82%)
 Frame = -3

Query: 1298 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 1119
            G PWP+ NDG++Y D+++P D+G +LI FYS KYKSSAPL GWLQRI N+QITIDG V+T
Sbjct: 11   GIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVIT 70

Query: 1118 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 939
            DP+ ILR G +LVY RLPWKEPD PYLLEILYEDN++IALNKPSGLQVLPGG+FQQRTVL
Sbjct: 71   DPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVL 130

Query: 938  TQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVC 759
            TQLQ  +   + S  +E HPVPVHRLGRGTSG+LLCAKTK+A+++ AA+FA+GTS+V   
Sbjct: 131  TQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRN 190

Query: 758  RMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALS 579
            R +  ++   R I+K+YRAL +G+I +DEV +DQPIG ++YPGVA+GLYVA+PSGKPA S
Sbjct: 191  RNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACS 250

Query: 578  KVVVLERNLLSNSTLVQ 528
            KV VLER+  S  TLVQ
Sbjct: 251  KVNVLERDEQSKHTLVQ 267



 Score =  143 bits (360), Expect(2) = e-130
 Identities = 67/100 (67%), Positives = 79/100 (79%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHLS IGHPL+GDPLY   GQP     E V++SFA+DGGYERP KPVP
Sbjct: 268 VEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVP 327

Query: 318 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK 199
           GDCGY+LHAH ++  HP TNE+ +I APLP  L+T  E++
Sbjct: 328 GDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367


>ref|XP_006651272.1| PREDICTED: RNA pseudouridine synthase 5-like [Oryza brachyantha]
          Length = 396

 Score =  327 bits (838), Expect(2) = e-124
 Identities = 171/266 (64%), Positives = 202/266 (75%), Gaps = 7/266 (2%)
 Frame = -3

Query: 1304 SFGEPWPEFNDGIYYRDLLRPSDAGAT--LIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 1131
            SFG PWPEFN+GI Y D  R +DAGAT  LI+FYS  YKSSAPL GW++RI N QIT+DG
Sbjct: 22   SFGRPWPEFNEGISYTDTFRCADAGATMTLIEFYSTTYKSSAPLPGWIKRIRNGQITVDG 81

Query: 1130 CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 951
             VVTDP + LR G +L+YHRLPW+EP AP+LL +LYED+D+IALNKPSGLQVLP GLFQQ
Sbjct: 82   EVVTDPDMTLRQGSKLIYHRLPWQEPFAPHLLGVLYEDDDMIALNKPSGLQVLPKGLFQQ 141

Query: 950  RTVLTQLQRHADNLTASGYQ-----EPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFA 786
            RTVL QLQ     + +S        + HPVPVHRLGRGTSG+LLCAKTK+AK+RLAA+FA
Sbjct: 142  RTVLAQLQMKDWKIPSSFCSKQKDVQSHPVPVHRLGRGTSGLLLCAKTKLAKARLAAYFA 201

Query: 785  DGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVA 606
            +GT+  G  R ++T     R I+K YRAL +G++  DEV I QPIGLV YPGVA+GLY A
Sbjct: 202  EGTTNAGKSR-DETDMCKVRKISKFYRALVTGILENDEVMITQPIGLVHYPGVAEGLYAA 260

Query: 605  SPSGKPALSKVVVLERNLLSNSTLVQ 528
              SGKPA+SKV VLER    N TLVQ
Sbjct: 261  CSSGKPAMSKVSVLERLEHRNQTLVQ 286



 Score =  147 bits (371), Expect(2) = e-124
 Identities = 74/108 (68%), Positives = 84/108 (77%), Gaps = 4/108 (3%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHES--VDESFAQDGGYERPEKP 325
           VEI SGRPHQIRIHL+ IGHPLV DPLY   GQPKF + ES   D+SFA DGGYERP +P
Sbjct: 287 VEIHSGRPHQIRIHLACIGHPLVDDPLYGIGGQPKFDELESSSTDDSFAYDGGYERPLQP 346

Query: 324 VPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK--AKKV 187
           VPGDCGYHLHAH +V  HP TNE+ +I+APLP  LQT EE +  AK+V
Sbjct: 347 VPGDCGYHLHAHWLVLCHPTTNEMIKITAPLPQILQTREEQQDTAKQV 394


>sp|Q0DST9.2|PUS5_ORYSJ RecName: Full=RNA pseudouridine synthase 5; AltName: Full=RNA
            pseudouridylate synthase 5; AltName: Full=RNA-uridine
            isomerase 5
          Length = 397

 Score =  324 bits (831), Expect(2) = e-123
 Identities = 168/268 (62%), Positives = 205/268 (76%), Gaps = 7/268 (2%)
 Frame = -3

Query: 1310 MVSFGEPWPEFNDGIYYRDLLRPSDAGAT--LIDFYSRKYKSSAPLHGWLQRIHNKQITI 1137
            + SFG PWPEFN+GI Y D  R +DAGAT  LI+FYS  YKSSAPL GW++RI + QIT+
Sbjct: 21   LYSFGTPWPEFNEGISYIDTFRCADAGATTTLIEFYSTSYKSSAPLPGWIKRIRDGQITV 80

Query: 1136 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 957
            DG V TDP +ILR G +LVYHRLPW+EP AP+LL++LYED+D+IALNKPSGLQVLP GLF
Sbjct: 81   DGEVATDPDMILREGSKLVYHRLPWQEPFAPHLLDVLYEDDDMIALNKPSGLQVLPKGLF 140

Query: 956  QQRTVLTQLQRHADNLTASGYQ-----EPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAF 792
            QQRTVL QLQ     + +S        + HPVPVHRLGRGTSG+LLCAKTK+AK++LAA+
Sbjct: 141  QQRTVLAQLQLKDWKMPSSFCSKRKDAQSHPVPVHRLGRGTSGLLLCAKTKLAKAQLAAY 200

Query: 791  FADGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLY 612
            FA+G +  G  R ++T     R I+K YRAL +G++  DEV I QPIGLV+YPGVA+GLY
Sbjct: 201  FAEGATNAGKSR-DETDICKARKISKFYRALVTGILENDEVMITQPIGLVRYPGVAEGLY 259

Query: 611  VASPSGKPALSKVVVLERNLLSNSTLVQ 528
             A  SGKPA+SKV VLER  + N TL+Q
Sbjct: 260  AACSSGKPAMSKVRVLERLKIHNHTLIQ 287



 Score =  145 bits (367), Expect(2) = e-123
 Identities = 70/102 (68%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE--SVDESFAQDGGYERPEKP 325
           VEI SGRPHQIRIHL++IGHPLV DPLY   GQPKF + E  S  +SFA DGGYERP +P
Sbjct: 288 VEIHSGRPHQIRIHLAYIGHPLVDDPLYGIGGQPKFDEPEPTSTADSFAYDGGYERPLQP 347

Query: 324 VPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLQTVEESK 199
           VPGDCGYHLHAH +V  HP TNE+ +I+APLP  LQT EE +
Sbjct: 348 VPGDCGYHLHAHWLVLCHPTTNEMIKITAPLPHILQTREEQQ 389


>ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutrema salsugineum]
            gi|557104939|gb|ESQ45273.1| hypothetical protein
            EUTSA_v10010446mg [Eutrema salsugineum]
          Length = 382

 Score =  336 bits (861), Expect(2) = e-122
 Identities = 171/261 (65%), Positives = 206/261 (78%), Gaps = 4/261 (1%)
 Frame = -3

Query: 1298 GEPWPEFNDGIYYRDLLRPSDAGA---TLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGC 1128
            G PWPE NDG+ Y+D++    + +   T+ DFYS KYKSSAPL GW+QRI N QI IDG 
Sbjct: 12   GLPWPELNDGLAYKDVVSSFSSSSELTTVSDFYSTKYKSSAPLLGWIQRIQNGQIQIDGE 71

Query: 1127 VVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQR 948
            VV D   +LR G +LVYHRLPWKEPD PY LE+LYEDND+IALNKPSGLQVLPGGLFQQR
Sbjct: 72   VVKDHNTLLRRGSKLVYHRLPWKEPDTPYSLEVLYEDNDLIALNKPSGLQVLPGGLFQQR 131

Query: 947  TVLTQLQ-RHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 771
            T+LTQLQ   +   +++G +E HPVPVHRLGRGTSG+LLCAKTK+AK++LA++FA+GTS 
Sbjct: 132  TLLTQLQWCFSKKDSSTGARESHPVPVHRLGRGTSGILLCAKTKLAKTKLASYFAEGTSL 191

Query: 770  VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 591
            VG   + D +    R I+K+YRALA G++ EDEV I QPIG+V+YPGVAKGLYVAS  GK
Sbjct: 192  VGFGNL-DQECGTGRKISKIYRALADGIVEEDEVVIKQPIGVVRYPGVAKGLYVASSEGK 250

Query: 590  PALSKVVVLERNLLSNSTLVQ 528
            PALSKV VLERN+  N TLV+
Sbjct: 251  PALSKVAVLERNMQRNCTLVK 271



 Score =  132 bits (333), Expect(2) = e-122
 Identities = 62/101 (61%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
 Frame = -2

Query: 498 VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 319
           VEIQSGRPHQIRIHL+++GHPLVGDPLY   G+PK  D ++VD +FA+DGGY RP + VP
Sbjct: 272 VEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGKPKCFDPDAVDSAFAEDGGYRRPNQAVP 331

Query: 318 GDCGYHLHAHHVVFSHPLT-NEINEISAPLPLNLQTVEESK 199
           GDCGYHLHAH V   + L  N++ ++ APLP  LQT  E++
Sbjct: 332 GDCGYHLHAHQVELPNLLNLNKVVKVVAPLPPILQTSSEAE 372