BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00016081
         (1086 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...   291   2e-76
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...   291   3e-76
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   196   1e-47
gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, put...   193   9e-47
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   191   6e-46
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   191   6e-46
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...   189   2e-45
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi...   184   4e-44
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi...   183   9e-44
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]     183   1e-43
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...   182   3e-43
ref|XP_006381622.1| pentatricopeptide repeat-containing family p...   176   1e-41
ref|XP_002326124.1| predicted protein [Populus trichocarpa]           176   1e-41
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi...   171   5e-40
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]     169   2e-39
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                      166   1e-38
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...   166   1e-38
gb|ESW05417.1| hypothetical protein PHAVU_011G177400g, partial [...   164   7e-38
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps...   163   1e-37
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ...   163   1e-37

>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Solanum tuberosum]
            gi|565370447|ref|XP_006351832.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score =  291 bits (746), Expect = 2e-76
 Identities = 145/249 (58%), Positives = 190/249 (76%), Gaps = 2/249 (0%)
 Frame = +3

Query: 345  SKILSTALFHGHTRIES--SHSSPASTLWFIKVVCTLCIHHSQSLTFFDTDYFRETLNPF 518
            S IL  A FHG T  +S  S+      +WF KVVC LC HHSQSL  F +DYFR+ L+P 
Sbjct: 9    SNILLIARFHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPH 68

Query: 519  VAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYE 698
            +AF V++HIN+ LNNP LAF F + +R++LNL+H   +F+LLLRSL +MG HDSA +V++
Sbjct: 69   IAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSAMLVFK 128

Query: 699  YMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSML 878
            +MKADG L  +S+L+SVV + ANAGKF+IA+EIL+++AE   E+  IV  FV+N+LLS+L
Sbjct: 129  FMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGRIVRPFVHNSLLSLL 188

Query: 879  MNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHP 1058
            M R++V+EAV+FFK+H+LR   L PDTC+FN V+RGLCRV  V+KAFEFF+ M SFGC P
Sbjct: 189  MKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCFP 248

Query: 1059 DLVTYNTLI 1085
            D VTYNTLI
Sbjct: 249  DTVTYNTLI 257


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Solanum lycopersicum]
          Length = 550

 Score =  291 bits (745), Expect = 3e-76
 Identities = 146/249 (58%), Positives = 189/249 (75%), Gaps = 2/249 (0%)
 Frame = +3

Query: 345  SKILSTALFHGHTRIES--SHSSPASTLWFIKVVCTLCIHHSQSLTFFDTDYFRETLNPF 518
            S I   A FHG T  +S  S+      +WF KVVC LC HHSQSL  F +DYFR+ L+P 
Sbjct: 9    SNISLIARFHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNLDPH 68

Query: 519  VAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYE 698
            +AF V++HIN+ LNNP LAF F + +R++LNLIH   +F+LLLRSL +MG HDSA +V++
Sbjct: 69   IAFTVIHHINTNLNNPRLAFRFLQCTRINLNLIHCIGSFNLLLRSLSQMGFHDSAMLVFK 128

Query: 699  YMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSML 878
            YMKADG L  +S+L+SVV + ANAGKF+IA+EIL+++AE   E+  IV  FV+N+LLS+L
Sbjct: 129  YMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLL 188

Query: 879  MNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHP 1058
            M R++V+EAV+FFK+H+LR   L PDTC+FN V+RGLCRV  V+KAFEFF+ M SFGC P
Sbjct: 189  MKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSP 248

Query: 1059 DLVTYNTLI 1085
            D VTYNTLI
Sbjct: 249  DTVTYNTLI 257



 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 38/151 (25%), Positives = 66/151 (43%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF  L+   CR G  D    +++ M +  L P       ++S+ +   +   A E+L   
Sbjct: 358  TFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELL--- 414

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
             +  +  + +   FVYN +L        ++EA        +  +  C D  +F I++ G 
Sbjct: 415  RQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAE--MESKGCCHDKITFTILILGH 472

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTL 1082
            C   ++ +A   FD M S GC PD +T + L
Sbjct: 473  CMKGRMLEALAIFDKMLSLGCVPDDITISCL 503


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Vitis vinifera]
          Length = 641

 Score =  196 bits (498), Expect = 1e-47
 Identities = 123/256 (48%), Positives = 154/256 (60%), Gaps = 5/256 (1%)
 Frame = +3

Query: 333  RVSVSKILSTALFHGHTRIESSHSSPASTL----WFIKVVCTLCIH-HSQSLTFFDTDYF 497
            RV  SKI + A FH H  +  S + P        W +KV+CTLC+  HS        DYF
Sbjct: 44   RVRASKI-AIAQFHEHA-VGISRNRPEVIQNPENWIVKVICTLCVRTHSLDACL---DYF 98

Query: 498  RETLNPFVAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHD 677
             +TL P +AF VV      LNNP+LA  FF+ SR++LNL H   T+  LLRSL  MG H+
Sbjct: 99   SKTLTPSIAFEVV----RGLNNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHE 154

Query: 678  SAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVY 857
            SAK VY+ M  DG  P +SVL  +VSS  +AGKF IA    V   EF        S  VY
Sbjct: 155  SAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIA-RTWVDGVEF--------SLVVY 205

Query: 858  NNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVM 1037
            N LL+ L+  NQV+EAV FF+  M        D+CSFNI++RGLCR+ KV+KAFE F+ M
Sbjct: 206  NKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DSCSFNILIRGLCRIGKVDKAFELFNEM 263

Query: 1038 KSFGCHPDLVTYNTLI 1085
            + FGC PD++TYNTLI
Sbjct: 264  RGFGCSPDVITYNTLI 279



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 54/229 (23%), Positives = 103/229 (44%)
 Frame = +3

Query: 399  HSSPASTLWFIKVVCTLCIHHSQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAF 578
            HS  AS L F+    T     + + T+ D   F       V +  + +   R N  D A 
Sbjct: 168  HSPDASVLGFLVSSATDAGKFNIARTWVDGVEFS-----LVVYNKLLNQLVRGNQVDEAV 222

Query: 579  SFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSS 758
             FFR  ++ L+      +F++L+R LCR+G  D A  ++  M+  G  P     +++++ 
Sbjct: 223  CFFR-EQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLING 281

Query: 759  FANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRL 938
            F    +     ++L    E  ++ +       Y +++S      ++ +A   F N +   
Sbjct: 282  FCRVNEVDRGHDLL---KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISS- 337

Query: 939  RSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
              + P+  +FNI++ G  +V  +  A   ++ M   GC PD++T+ +LI
Sbjct: 338  -GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLI 385


>gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao]
          Length = 592

 Score =  193 bits (491), Expect = 9e-47
 Identities = 100/221 (45%), Positives = 146/221 (66%)
 Frame = +3

Query: 423  WFIKVVCTLCIHHSQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYSRL 602
            WF+KVVCTL ++ SQ L      Y  + L P + F VV      LNNP L   F  +SR+
Sbjct: 91   WFVKVVCTLFVY-SQPLDDSCLSYLSKNLTPLIEFEVV----KWLNNPALGLKFLEFSRV 145

Query: 603  SLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFK 782
            + N+ H   T++LL+RS C MGLHDSAK+V++YM+ DG LP +++L  ++SSF  AG+F 
Sbjct: 146  NFNIAHSFWTYNLLMRSFCHMGLHDSAKLVFDYMRIDGHLPDTTILGFMISSFGRAGEFG 205

Query: 783  IAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTC 962
            +A+++L          E ++S F  NNLL+M++ +N++ EAV  +K ++    +  PD  
Sbjct: 206  MAKKLLAD----VQSDEVVISIFALNNLLNMMVKQNKLEEAVSLYKENL--GSNFYPDAW 259

Query: 963  SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            +FNI++RGLCRV KV++AFE F+ M SFGC PD+VTYNT+I
Sbjct: 260  TFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTII 300



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEIL--V 803
            TF++L+R LCR+G  D A  ++  M + G  P     +++++      +     ++L  V
Sbjct: 260  TFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQV 319

Query: 804  AKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMR 983
               + C+   ++V+   Y +++S      +++EA   F  H +      P   +FN+++ 
Sbjct: 320  QSRDDCSP--DVVT---YTSVISGYCKLGKMDEASALF--HEMISSGTVPTVVTFNVLID 372

Query: 984  GLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            G  +V  +  A   ++ M SFGC  D+VT+ +LI
Sbjct: 373  GFGKVGDMVSAKSMYEQMASFGCIADVVTFTSLI 406


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  191 bits (484), Expect = 6e-46
 Identities = 105/225 (46%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
 Frame = +3

Query: 414  STLWFIKVVCTLCIH-HSQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFR 590
            S  W +KVVCTL    HS +  F    Y    LNP +AF V+     R ++P L   FF 
Sbjct: 45   SEAWLVKVVCTLFFRSHSLNACF---GYLSRNLNPSIAFEVI----KRFSDPLLGLKFFE 97

Query: 591  YSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANA 770
            +SR  L++ H   T+DLL+R+LC++GL+DSAK+V++ M++DG+LP SS+L+ +VSS+A  
Sbjct: 98   FSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARM 157

Query: 771  GKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLC 950
            GK   A+  L      C   +  VS FVYNNLL+ML+ +N V+EAV  F+ H+       
Sbjct: 158  GKLDSAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY--FV 211

Query: 951  PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            PD  SFNI++RGLCR+ +++KAFEFF  M +FGC PD+V+YNTLI
Sbjct: 212  PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLI 256



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
 Frame = +3

Query: 618  HLEP-------TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            HLEP       +F++L+R LCR+G  D A   ++ M   G  P     +++++ F    +
Sbjct: 205  HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNE 264

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
                 ++L           ++++   Y +++S       +  A E F   +     + P+
Sbjct: 265  ISKGHDLLKEDMLIKGVSPDVIT---YTSIISGYCKLGDMKAASELFDEMVSS--GIKPN 319

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
              +FN+++ G  +V  +  A   ++ M   GC PD+VT+ +LI
Sbjct: 320  DFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLI 362


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  191 bits (484), Expect = 6e-46
 Identities = 105/225 (46%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
 Frame = +3

Query: 414  STLWFIKVVCTLCIH-HSQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFR 590
            S  W +KVVCTL    HS +  F    Y    LNP +AF V+     R ++P L   FF 
Sbjct: 45   SEAWLVKVVCTLFFRSHSLNACF---GYLSRNLNPSIAFEVI----KRFSDPLLGLKFFE 97

Query: 591  YSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANA 770
            +SR  L++ H   T+DLL+R+LC++GL+DSAK+V++ M++DG+LP SS+L+ +VSS+A  
Sbjct: 98   FSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARM 157

Query: 771  GKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLC 950
            GK   A+  L      C   +  VS FVYNNLL+ML+ +N V+EAV  F+ H+       
Sbjct: 158  GKLDSAKNFL--NEVHCYGIK--VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY--FV 211

Query: 951  PDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            PD  SFNI++RGLCR+ +++KAFEFF  M +FGC PD+V+YNTLI
Sbjct: 212  PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLI 256



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
 Frame = +3

Query: 618  HLEP-------TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            HLEP       +F++L+R LCR+G  D A   ++ M   G  P     +++++ F    +
Sbjct: 205  HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNE 264

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
                 ++L           ++++   Y +++S       +  A E F   +     + P+
Sbjct: 265  ISKGHDLLKEDMLIKGVSPDVIT---YTSIISGYCKLGDMKAASELFDEMVSS--GIKPN 319

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
              +FN+++ G  +V  +  A   ++ M   GC PD+VT+ +LI
Sbjct: 320  DFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLI 362


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
            gi|557556032|gb|ESR66046.1| hypothetical protein
            CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score =  189 bits (479), Expect = 2e-45
 Identities = 115/261 (44%), Positives = 163/261 (62%), Gaps = 10/261 (3%)
 Frame = +3

Query: 333  RVSVSKILSTALFHGHTRIESSHSSP----------ASTLWFIKVVCTLCIHHSQSLTFF 482
            RV  S I + A FHG   + +  S P          ++  WF+KVVCTL +  S  L+  
Sbjct: 57   RVRASTIAAIAHFHG---LANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY-LSDT 112

Query: 483  DTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCR 662
               Y  E L+P  +  V+     RL+NP L   F  +SR++L+L H   T++L++RSLC 
Sbjct: 113  CARYLCEKLSPLNSLEVI----KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168

Query: 663  MGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIV 842
            MGLHDS +VV++YM++DG LP S +++  VSS   AGK   A+ +L   ++F    E  +
Sbjct: 169  MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL---SQF-RPGEVTM 224

Query: 843  SSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFE 1022
            S+F+YN+LL+ L+ +N  +EAV  FK +  RL S  PDT +FNI++RGLCR+ +V+KAFE
Sbjct: 225  STFMYNSLLNALVKQNNADEAVYMFKEY-FRLYSQ-PDTWTFNILIRGLCRIGEVKKAFE 282

Query: 1023 FFDVMKSFGCHPDLVTYNTLI 1085
            FF  M SFGC PD+VTYNTLI
Sbjct: 283  FFYDMGSFGCSPDIVTYNTLI 303


>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Fragaria vesca subsp. vesca]
          Length = 583

 Score =  184 bits (468), Expect = 4e-44
 Identities = 107/221 (48%), Positives = 144/221 (65%)
 Frame = +3

Query: 423  WFIKVVCTLCIHHSQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYSRL 602
            WF+KVV TL +  S SL  +   Y  + L P +AF V+     RLNNP L   FF  S+ 
Sbjct: 84   WFVKVVYTLFLR-SHSLDSY-VGYLSKNLTPSLAFEVI----KRLNNPKLGLRFFELSKF 137

Query: 603  SLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFK 782
            SLN+ H   T+  LLRSLC+MGL DSAK+V++YM+ DGL P  SVL+ +VSS A  G+  
Sbjct: 138  SLNVNHGVWTYHYLLRSLCQMGLQDSAKLVFDYMRTDGLSPNESVLEFLVSSCAQMGRSD 197

Query: 783  IAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTC 962
            +AE+IL      C+     +SSFVYNNL ++L+  N+V+EAV  F+ ++      CPD+ 
Sbjct: 198  LAEKIL--DEVHCSVVG--LSSFVYNNLFNVLVKLNRVDEAVCLFRKYVGSY--CCPDSW 251

Query: 963  SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            +FNI++RGLCR   V+K  EFF  M+SFGC P++VTYNTLI
Sbjct: 252  TFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLI 292


>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Citrus sinensis]
            gi|568841566|ref|XP_006474729.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Citrus sinensis]
          Length = 595

 Score =  183 bits (465), Expect = 9e-44
 Identities = 113/261 (43%), Positives = 162/261 (62%), Gaps = 10/261 (3%)
 Frame = +3

Query: 333  RVSVSKILSTALFHGHTRIESSHSSP----------ASTLWFIKVVCTLCIHHSQSLTFF 482
            RV  S I + A FHG   + +  S P          ++  WF+KVVCTL +  S  L+  
Sbjct: 57   RVRASTIAAIAHFHG---LANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY-LSDT 112

Query: 483  DTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCR 662
               Y  E L+P  +  V+     RL+NP L   F  +SR++L+L H   T++L++RSLC 
Sbjct: 113  CARYLCEKLSPLNSLEVI----KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168

Query: 663  MGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIV 842
            MGLHDS +VV++YM++DG LP S +++  VSS   AGK   A+ +L   ++F    E  +
Sbjct: 169  MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL---SQF-RPGEVTM 224

Query: 843  SSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFE 1022
            S+F+YN+LL+ L+ +N  +EAV  FK +  RL S  PDT +FNI+++GL R+ +V+KAFE
Sbjct: 225  STFMYNSLLNALVKQNNADEAVYMFKEY-FRLYSQ-PDTWTFNILIQGLSRIGEVKKAFE 282

Query: 1023 FFDVMKSFGCHPDLVTYNTLI 1085
            FF  M SFGC PD+VTYNTLI
Sbjct: 283  FFYDMGSFGCSPDIVTYNTLI 303


>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
          Length = 732

 Score =  183 bits (464), Expect = 1e-43
 Identities = 119/299 (39%), Positives = 172/299 (57%), Gaps = 15/299 (5%)
 Frame = +3

Query: 234  QENGMKTTRFIVVSLFV-----NHQSLI*LIRMQFGAQR---VSVSKILST---ALFHGH 380
            +++G   TR ++ +++      N  + + +  + F   R   V VS+I      +L HG 
Sbjct: 19   RKSGPPQTRIVIENIYESKAEPNDSAAVQMSLLFFTTTRPLWVRVSRIAIAHFNSLAHGG 78

Query: 381  TRIESSHSSPA---STLWFIKVVCTLCIHHSQSLTFFDTDYFRETLNPFVAFGVVYHINS 551
            +R    H       S  WF+KVVCTL +  S SL     D F   LNP  AF V+     
Sbjct: 79   SRARPFHDREILSNSEAWFVKVVCTLFVR-SHSL-----DCFSNNLNPSTAFEVI----R 128

Query: 552  RLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTS 731
            RLN+P L   FF  SR++LN+ H   +++ L+RSLC+MGLHDSAK V++  K+DG LP S
Sbjct: 129  RLNSPTLGLKFFALSRVNLNVNHTLSSYNYLMRSLCQMGLHDSAKFVFDCFKSDGHLPDS 188

Query: 732  SVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVE 911
            S+++ ++ S A  G+  + E++L    +       IVSS VYNNLL++L+ +N+V EAV 
Sbjct: 189  SIVEFLLCSHAQVGRLDLVEKLL----DELRRDGIIVSSIVYNNLLNVLVKQNKVCEAVC 244

Query: 912  FFKNHM-LRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
             F+ HM  R R   P T +FNI+++GLC +  V  AFEF + M   GC PD+VTYNTLI
Sbjct: 245  LFRKHMNSRFR---PSTWTFNILIQGLCGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLI 300



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHD-SAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVA 806
            T++ L+  LC+    D    ++ E      L P +    SV+S +   G+   A  +   
Sbjct: 295  TYNTLISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKLGRMSEASSLF-- 352

Query: 807  KAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRG 986
             AE  N   +  ++  +N L+        +  AV  F+ +M       PDT +FNI++RG
Sbjct: 353  -AEMINSGIKPAAA-TFNALIDGHAKAGDMASAVCLFRRNMTL--HFQPDTWTFNILIRG 408

Query: 987  LCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            LC V KV  AFEFF  M  FGC PD++TYNTLI
Sbjct: 409  LCGVGKVHTAFEFFKDMGKFGCSPDVITYNTLI 441


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score =  182 bits (461), Expect = 3e-43
 Identities = 104/223 (46%), Positives = 145/223 (65%), Gaps = 2/223 (0%)
 Frame = +3

Query: 423  WFIKVVCTLCIH-HSQSLTFFDTDYFRETLN-PFVAFGVVYHINSRLNNPDLAFSFFRYS 596
            WF+KV+  L +  H    T     Y  E LN P VAF V+  +N   NNP +   F  + 
Sbjct: 29   WFVKVIAILFVRSHCSDAT--SLGYLSEKLNDPLVAFEVIKRLN---NNPQVGLKFMEFC 83

Query: 597  RLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            RL+ +LIH   T++LL+RSLC+MGLHD  ++V  YM++DG L  S VL  +V+SFA AGK
Sbjct: 84   RLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGK 143

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
            F +A+++++        +E  +SSFVYN LL+ L+   +V+EA+  FK + L   S  P+
Sbjct: 144  FDLAKKLIIE----VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKEN-LAFHS-PPN 197

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            T +FNI++RGLCRV +VEK FE F+ M+SFGC PD+VTYNTLI
Sbjct: 198  TWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLI 240


>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550336330|gb|ERP59419.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 511

 Score =  176 bits (446), Expect = 1e-41
 Identities = 93/193 (48%), Positives = 129/193 (66%)
 Frame = +3

Query: 507  LNPFVAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAK 686
            L P +AF V+     R NNP + F F  +SRL+LN+ H   T++LL+RSLC+MG HD   
Sbjct: 38   LTPLIAFEVI----KRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVN 93

Query: 687  VVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNL 866
            +V++YM +DG LP S +L  +V+  A A  F + +++L         KE  ++SFVYNNL
Sbjct: 94   IVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE----VQGKEVRINSFVYNNL 149

Query: 867  LSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSF 1046
            LS+L+ +NQV+EA+  FK +   L    PDT +FNI++RGLCRV  V++AFE F  M+SF
Sbjct: 150  LSVLVKQNQVHEAIYLFKEY---LAMQSPDTWTFNILIRGLCRVGGVDRAFEVFKDMESF 206

Query: 1047 GCHPDLVTYNTLI 1085
            GC PD+VTYNTLI
Sbjct: 207  GCLPDVVTYNTLI 219



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 38/152 (25%), Positives = 77/152 (50%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF++L+R LCR+G  D A  V++ M++ G LP     +++++    A + +   E+    
Sbjct: 179  TFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEI 238

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
                +   +IV+   Y +++S      ++ EA   F+  M     + P+  +FN+++ G 
Sbjct: 239  QSRSDCSPDIVT---YTSIISGFCKSGKMKEASNLFEEMM--RSGIQPNVITFNVLIDGF 293

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
             ++  + +A   +  M  F C  D+VT+ +LI
Sbjct: 294  GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLI 325


>ref|XP_002326124.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  176 bits (446), Expect = 1e-41
 Identities = 92/193 (47%), Positives = 130/193 (67%)
 Frame = +3

Query: 507  LNPFVAFGVVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAK 686
            L P +AF V+     R NNP + F F  +SRL+LN+ H   T++LL+RSLC+MG HD   
Sbjct: 38   LTPLIAFEVI----KRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVN 93

Query: 687  VVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNL 866
            +V++YM +DG LP S +L  +V+  A A  F + +++L         KE  ++SFVYNNL
Sbjct: 94   IVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE----VQGKEVRINSFVYNNL 149

Query: 867  LSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSF 1046
            LS+L+ +NQV+EA+  FK +++      PDT +FNI++RGLCRV  V++AFE F  M+SF
Sbjct: 150  LSVLVKQNQVHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEVFKDMESF 207

Query: 1047 GCHPDLVTYNTLI 1085
            GC PD+VTYNTLI
Sbjct: 208  GCLPDVVTYNTLI 220



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 38/152 (25%), Positives = 77/152 (50%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF++L+R LCR+G  D A  V++ M++ G LP     +++++    A + +   E+    
Sbjct: 180  TFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEI 239

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
                +   +IV+   Y +++S      ++ EA   F+  M     + P+  +FN+++ G 
Sbjct: 240  QSRSDCSPDIVT---YTSIISGFCKSGKMKEASNLFEEMM--RSGIQPNVITFNVLIDGF 294

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
             ++  + +A   +  M  F C  D+VT+ +LI
Sbjct: 295  GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLI 326


>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Glycine max]
          Length = 544

 Score =  171 bits (433), Expect = 5e-40
 Identities = 97/221 (43%), Positives = 146/221 (66%)
 Frame = +3

Query: 423  WFIKVVCTLCIHHSQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYSRL 602
            WF+K+V TL +  S SL      YFRE L P     VV     R NNP+L F FFR++R 
Sbjct: 46   WFVKIVSTLFLC-SNSLDDRFLGYFREHLTPSHVLEVV----KRFNNPNLGFKFFRFTRE 100

Query: 603  SLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFK 782
             L++ H   T+++LLRSLC+ GLH+SAK++Y+ M++DG LP S +L  +VSSFA A +F 
Sbjct: 101  RLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFD 160

Query: 783  IAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTC 962
            +++E+L A+A+    + +++   VYNN L++L+  N++++A+  F+  ++R  S C D  
Sbjct: 161  VSKELL-AEAQCSGVQVDVI---VYNNFLNILIKHNRLDDAICLFR-ELMRSHS-CLDAF 214

Query: 963  SFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            +FNI++RGLC    V++AFE    M SFGC PD+VTYN L+
Sbjct: 215  TFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILL 255


>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
          Length = 570

 Score =  169 bits (427), Expect = 2e-39
 Identities = 104/245 (42%), Positives = 143/245 (58%), Gaps = 1/245 (0%)
 Frame = +3

Query: 354  LSTALFHGHTRIESSHSSPASTLWFIKVVCTLCIHHSQSLTFFDTDYFRETLNPFVAFGV 533
            +S   FH H R E    S A   WF+KVV TL +      TFF   Y  + L P ++F V
Sbjct: 56   VSLVHFH-HKRKEVISYSEA---WFVKVVSTLFVRSQSLNTFFG--YLSKKLTPSISFEV 109

Query: 534  VYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKAD 713
            +  +N   NNP+L   FF  SR +L++ H   T++LL+RSLC+MG HDSAK V++ M+ D
Sbjct: 110  IKRLN---NNPNLGLKFFELSRANLSVNHSFSTYNLLIRSLCQMGFHDSAKFVFDCMRID 166

Query: 714  GLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEI-VSSFVYNNLLSMLMNRN 890
            G  P +S ++ +V  FA  GK    E++L          EEI  S FVY++L ++L+  N
Sbjct: 167  GHSPDNSTIEFLVCVFAKVGKLDSCEKLL----------EEIRASKFVYSSLFNVLVKNN 216

Query: 891  QVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVT 1070
            +V EAV  F+  +       PDT +FNI++ GLC V +V  AFEFF+ M  F C PD+VT
Sbjct: 217  KVYEAVCLFRKQI--GSHFVPDTWTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVT 274

Query: 1071 YNTLI 1085
            YNTLI
Sbjct: 275  YNTLI 279


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  166 bits (420), Expect = 1e-38
 Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 2/223 (0%)
 Frame = +3

Query: 423  WFIKVVCTLCIHH--SQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYS 596
            W +K+V TL ++      L F    Y  + LNPF++F VV  ++   NNP + F F+ +S
Sbjct: 40   WLVKIVSTLFVYRVPDSDLCFC---YLSKNLNPFISFEVVKKLD---NNPHIGFRFWEFS 93

Query: 597  RLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            R  LN+ H   T++LL RSLC+ GLHD A  ++E MK+DG+ P + +L  +VSSFA  GK
Sbjct: 94   RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
               A  +L+   E            V N+LL+ L+  ++V +A++ F  H LR +S C D
Sbjct: 154  LHFATALLLQSFEVEG------CCMVVNSLLNTLVKLDRVEDAMKLFDEH-LRFQS-CND 205

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            T +FNI++RGLC V K EKA E   VM  FGC PD+VTYNTLI
Sbjct: 206  TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 40/152 (26%), Positives = 71/152 (46%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF  L+   CR+G       ++E M A G+ P +     ++++  N  +   A E+L   
Sbjct: 349  TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
            A     K+ I   F+YN ++       +VNEA    +   +  +   PD  +F I++ G 
Sbjct: 409  AS----KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE--MEKKKCKPDKITFTILIIGH 462

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            C   ++ +A   F  M + GC PD +T ++L+
Sbjct: 463  CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|42570711|ref|NP_973429.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
            [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|330250896|gb|AEC05990.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|330250897|gb|AEC05991.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  166 bits (420), Expect = 1e-38
 Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 2/223 (0%)
 Frame = +3

Query: 423  WFIKVVCTLCIHH--SQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYS 596
            W +K+V TL ++      L F    Y  + LNPF++F VV  ++   NNP + F F+ +S
Sbjct: 40   WLVKIVSTLFVYRVPDSDLCFC---YLSKNLNPFISFEVVKKLD---NNPHIGFRFWEFS 93

Query: 597  RLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            R  LN+ H   T++LL RSLC+ GLHD A  ++E MK+DG+ P + +L  +VSSFA  GK
Sbjct: 94   RFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
               A  +L+   E            V N+LL+ L+  ++V +A++ F  H LR +S C D
Sbjct: 154  LHFATALLLQSFEVEG------CCMVVNSLLNTLVKLDRVEDAMKLFDEH-LRFQS-CND 205

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            T +FNI++RGLC V K EKA E   VM  FGC PD+VTYNTLI
Sbjct: 206  TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 40/152 (26%), Positives = 71/152 (46%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF  L+   CR+G       ++E M A G+ P +     ++++  N  +   A E+L   
Sbjct: 349  TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
            A     K+ I   F+YN ++       +VNEA    +   +  +   PD  +F I++ G 
Sbjct: 409  AS----KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE--MEKKKCKPDKITFTILIIGH 462

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            C   ++ +A   F  M + GC PD +T ++L+
Sbjct: 463  CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494


>gb|ESW05417.1| hypothetical protein PHAVU_011G177400g, partial [Phaseolus vulgaris]
          Length = 456

 Score =  164 bits (414), Expect = 7e-38
 Identities = 96/223 (43%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
 Frame = +3

Query: 423  WFIKVVCTLCIHHSQSLTFFD--TDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYS 596
            WF+K+V TL +  S   TF D   DYF+              +  RLNNP+L F F++++
Sbjct: 59   WFVKIVSTLFLCSS---TFDDGFLDYFQ--------------VVRRLNNPNLGFMFYQFT 101

Query: 597  RLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            R  L++ H   T+++LLRSLCR  LH SAK++Y+ M++DG LP S +L  +VSSFA A +
Sbjct: 102  RERLSMAHSFWTYNMLLRSLCRASLHSSAKLLYDSMRSDGQLPDSGLLGFLVSSFALADR 161

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
            F +++E+L A+A+ CN  +  V   VYNN L++L+  N++++A+  F+  M    SL  +
Sbjct: 162  FDVSKELL-AEAQ-CNGIQ--VKVIVYNNFLNILIKHNKLDDAICLFRELMRTHSSL--E 215

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            T +FNI+MRGLC   +V++AF     M+SFGC PD+VTYNTL+
Sbjct: 216  TFTFNILMRGLCTAGEVDEAFRLLSDMRSFGCLPDIVTYNTLL 258


>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
            gi|565479514|ref|XP_006297397.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
            gi|482566105|gb|EOA30294.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
            gi|482566106|gb|EOA30295.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
          Length = 535

 Score =  163 bits (413), Expect = 1e-37
 Identities = 98/245 (40%), Positives = 142/245 (57%), Gaps = 7/245 (2%)
 Frame = +3

Query: 372  HGHTRIESSHSSPASTL-----WFIKVVCTLCIHH--SQSLTFFDTDYFRETLNPFVAFG 530
            HG  +    HS+    +     W IK+V TL ++      L F    Y  + LNPF+AF 
Sbjct: 18   HGGAQARPLHSNKREVMHCPEAWLIKIVSTLFVYRVPDSDLCFC---YLSKNLNPFIAFE 74

Query: 531  VVYHINSRLNNPDLAFSFFRYSRLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKA 710
            VV  +++  N+P L F F+ +SR  LN+ H   T+++L RSLC+ G+HD A  ++E M++
Sbjct: 75   VVKKLDN--NHPHLGFRFWEFSRFKLNIRHSFWTYNVLTRSLCKAGMHDLAGQMFECMRS 132

Query: 711  DGLLPTSSVLDSVVSSFANAGKFKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRN 890
            DG+ P S +L  +VSSFA  GK + A  +L+   E            V N+LL+ L+  +
Sbjct: 133  DGVSPNSRLLGFLVSSFAEKGKLQFATALLLQSYEVER------CCMVVNSLLNTLVKLD 186

Query: 891  QVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVT 1070
            +V++A++ F  H LR +  C DT +FNI++RGLC V K EKA E    M  FGC PD+VT
Sbjct: 187  RVDDAMKLFDKH-LRFQ-CCNDTKTFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIVT 244

Query: 1071 YNTLI 1085
            YNTLI
Sbjct: 245  YNTLI 249



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 41/152 (26%), Positives = 69/152 (45%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF  L+   CR G  +    ++E M A G+LP       ++++         A E+L   
Sbjct: 350  TFTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNEFTYSILINALCKENSLLKARELLGQL 409

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
            A     K+ I   F+YN ++       +VNEA    +   +  +   PD  +F I++ G 
Sbjct: 410  AS----KDIITKPFMYNPVIDGFCKAGKVNEANVIVEE--MEKKKCKPDKITFTILIIGH 463

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            C   ++ +A   F  M + GC PD +T N+L+
Sbjct: 464  CMKGRMFEAVSIFHKMVAIGCSPDKITVNSLL 495



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 40/152 (26%), Positives = 74/152 (48%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF++L+R LC +G  + A  +   M   G  P     ++++  F  + +   A E+L   
Sbjct: 209  TFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLNDV 268

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
                    ++V+   Y +++S      ++ EA     + ML L  + P T +FN+++ G 
Sbjct: 269  KSSSGCSPDVVT---YTSMISGYCKAGKMQEAY-LLLDDMLGL-GIYPTTITFNVLVDGY 323

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
             +  ++  A +    M SFGC PD+VT+ +LI
Sbjct: 324  AKAGEMTSAEDIRGKMISFGCFPDVVTFTSLI 355


>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331650|gb|EFH62069.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 536

 Score =  163 bits (412), Expect = 1e-37
 Identities = 95/223 (42%), Positives = 134/223 (60%), Gaps = 2/223 (0%)
 Frame = +3

Query: 423  WFIKVVCTLCIHH--SQSLTFFDTDYFRETLNPFVAFGVVYHINSRLNNPDLAFSFFRYS 596
            W +K+V TL ++      L F    Y  + LNPF++F VV  ++   NNP + F F+ +S
Sbjct: 40   WLVKIVSTLFVYRVPDSDLCFC---YLSKNLNPFISFEVVKKLD---NNPHIGFRFWEFS 93

Query: 597  RLSLNLIHLEPTFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGK 776
            R  LN+ H   T++LL RSLC+ G+HD A  ++E MK+DG+ P S +L  +VSSFA  GK
Sbjct: 94   RFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGK 153

Query: 777  FKIAEEILVAKAEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPD 956
               A  +L+   E            V N+LL+ L+  ++V +A++ F+ H LR +S C D
Sbjct: 154  LHCATALLLQSYEVEG------CCMVVNSLLNTLVKLDRVEDAMKLFEEH-LRFQS-CND 205

Query: 957  TCSFNIVMRGLCRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            T +FNI++RGLC V K EKA E    M  FGC PD+VTYNTLI
Sbjct: 206  TKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLI 248



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 42/152 (27%), Positives = 75/152 (49%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF++L+R LC +G  + A  +   M   G LP     ++++  F  + + K A E+    
Sbjct: 208  TFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDV 267

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
                    ++V+   Y +++S      ++ EA     + MLRL  + P   +FN+++ G 
Sbjct: 268  KSSSGCSPDVVT---YTSMISGYCKAGKMQEA-SVLLDDMLRL-GIYPTNVTFNVLVDGY 322

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
             +  ++  A E    M SFGC PD+VT+ +LI
Sbjct: 323  AKAGEMHTAEEIRGKMISFGCFPDVVTFTSLI 354



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 39/152 (25%), Positives = 72/152 (47%)
 Frame = +3

Query: 630  TFDLLLRSLCRMGLHDSAKVVYEYMKADGLLPTSSVLDSVVSSFANAGKFKIAEEILVAK 809
            TF  L+   CR+G  +    ++E M A G+ P +     ++++     +   A E+L   
Sbjct: 349  TFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQL 408

Query: 810  AEFCNEKEEIVSSFVYNNLLSMLMNRNQVNEAVEFFKNHMLRLRSLCPDTCSFNIVMRGL 989
            A     K+ I   F+YN ++       +VNEA+   +   +  +   PD  +F I++ G 
Sbjct: 409  AS----KDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEE--MEKKKCKPDKITFTILIIGH 462

Query: 990  CRVSKVEKAFEFFDVMKSFGCHPDLVTYNTLI 1085
            C   ++ +A   F  M + GC PD +T ++L+
Sbjct: 463  CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494