BLASTX nr result
ID: Rehmannia22_contig00016076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00016076
(675 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363193.1| PREDICTED: transcription factor TFIIIB compo... 83 7e-14
ref|XP_006363194.1| PREDICTED: transcription factor TFIIIB compo... 82 2e-13
ref|XP_004232644.1| PREDICTED: uncharacterized protein LOC101258... 82 2e-13
ref|XP_006363192.1| PREDICTED: transcription factor TFIIIB compo... 80 6e-13
ref|XP_006487245.1| PREDICTED: transcription factor TFIIIB compo... 66 9e-09
ref|XP_006423360.1| hypothetical protein CICLE_v10027900mg [Citr... 65 1e-08
ref|XP_006487247.1| PREDICTED: transcription factor TFIIIB compo... 65 2e-08
ref|XP_006487246.1| PREDICTED: transcription factor TFIIIB compo... 65 2e-08
ref|XP_006487244.1| PREDICTED: transcription factor TFIIIB compo... 65 2e-08
ref|XP_006423359.1| hypothetical protein CICLE_v10027900mg [Citr... 64 3e-08
ref|XP_006423357.1| hypothetical protein CICLE_v10027900mg [Citr... 64 3e-08
gb|ABW81081.1| TF2 [Cleome spinosa] 57 4e-06
>ref|XP_006363193.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
X2 [Solanum tuberosum]
Length = 709
Score = 83.2 bits (204), Expect = 7e-14
Identities = 78/244 (31%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Frame = -1
Query: 666 DPLDDIFADEAVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSELSEPVG 487
D LDDIFA A K +A GKFQPKAK R +K D+ ++ SE +
Sbjct: 2 DLLDDIFAGGASKTVKAGGKFQPKAKPRSLKKGPAVASSSLTSKPTG-DTVATDSSEALK 60
Query: 486 TAKPSENL----------------------------VSGSDAVPNDNGAWHSFMEKSVGE 391
+ K S+N + S + ++N W S EKS GE
Sbjct: 61 SGKNSQNCDEQSSVLAEPSLVHPLAAETLVPSVGSSLDASMVITDNNENWKSCFEKSEGE 120
Query: 390 NADIFIELEALGDFLPHTSSDMECTVPPSEAVALNVPNPEDARGGRAIPVFSSVEDSLTA 211
NADI+I L++ D LPH+S + PS A A ++ IPV SSV+ S +
Sbjct: 121 NADIYIGLDSFDDLLPHSSG-----IDPSAAHAAGAEKQQEQ---LLIPV-SSVDGSAHS 171
Query: 210 GEPNVPSSD---GRDHM--HDSDLGREVMDAMDSI--NMTELTTKSGHRKGKFQPKPKIQ 52
N+ S + G+D + S L MD S+ ++ +TT SG + +FQPKPK+Q
Sbjct: 172 AS-NLQSDEVAAGQDPLTFQASVLSVSEMDTYSSLEADILGVTTISGQSR-RFQPKPKLQ 229
Query: 51 MHKE 40
+++E
Sbjct: 230 VYRE 233
>ref|XP_006363194.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
X3 [Solanum tuberosum]
Length = 702
Score = 82.0 bits (201), Expect = 2e-13
Identities = 77/242 (31%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Frame = -1
Query: 666 DPLDDIFADEAVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSELSEPVG 487
D LDDIFA A K +A GKFQPKAK R +K D+ ++ SE +
Sbjct: 2 DLLDDIFAGGASKTVKAGGKFQPKAKPRSLKKGPAVASSSLTSKPTG-DTVATDSSEALK 60
Query: 486 TAKPSENL----------------------------VSGSDAVPNDNGAWHSFMEKSVGE 391
+ K S+N + S + ++N W S EKS GE
Sbjct: 61 SGKNSQNCDEQSSVLAEPSLVHPLAAETLVPSVGSSLDASMVITDNNENWKSCFEKSEGE 120
Query: 390 NADIFIELEALGDFLPHTSSDMECTVPPSEAVALNVPNPEDARGGRAIPVFSSVEDSLTA 211
NADI+I L++ D LPH+S + PS A A ++ IPV SSV+ S +
Sbjct: 121 NADIYIGLDSFDDLLPHSSG-----IDPSAAHAAGAEKQQEQ---LLIPV-SSVDGSAHS 171
Query: 210 GEPNVPSSD---GRDHMHDSDLGREVMDAMDSI--NMTELTTKSGHRKGKFQPKPKIQMH 46
N+ S + G+D L + MD S+ ++ +TT SG + +FQPKPK+Q++
Sbjct: 172 AS-NLQSDEVAAGQD-----PLTFQEMDTYSSLEADILGVTTISGQSR-RFQPKPKLQVY 224
Query: 45 KE 40
+E
Sbjct: 225 RE 226
>ref|XP_004232644.1| PREDICTED: uncharacterized protein LOC101258718 [Solanum
lycopersicum]
Length = 702
Score = 81.6 bits (200), Expect = 2e-13
Identities = 76/239 (31%), Positives = 102/239 (42%), Gaps = 30/239 (12%)
Frame = -1
Query: 666 DPLDDIFADEAVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTI---------DST 514
D LDDIFA A K +A GKFQPKAK RP +K D
Sbjct: 2 DLLDDIFAGGASKTVKAGGKFQPKAKPRPVKKGPAVASSSLTSKPTGDTVATDYSEGDEQ 61
Query: 513 QSELSEP-VGTAKPSENLV-------SGSDAVPNDNGAWHSFMEKSVGENADIFIELEAL 358
L+EP +G +E LV S + ++N W S EKS GENADI+I L++
Sbjct: 62 SPVLAEPSLGRPLAAETLVPSVGSSLDASMVITDNNEDWKSCFEKSEGENADIYIGLDSF 121
Query: 357 GDFLPHTSSDMECTVPPSEAVALNVPN-------PEDARGGRAIPVFSSVEDSLTAG--- 208
D LPH+S + PS A A P + G A + D + AG
Sbjct: 122 DDLLPHSSG-----IDPSAAHAAGAEKRQEQLLVPVSSVDGSAHSASNLQSDEVAAGQDP 176
Query: 207 ---EPNVPSSDGRDHMHDSDLGREVMDAMDSINMTELTTKSGHRKGKFQPKPKIQMHKE 40
+ +V S G M D + +TT SG + +FQPKPK+Q+++E
Sbjct: 177 LTFQASVLSVSGSCQMETDTYSFLEADILG------VTTISGQSR-RFQPKPKLQVYRE 228
>ref|XP_006363192.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
X1 [Solanum tuberosum]
Length = 714
Score = 80.1 bits (196), Expect = 6e-13
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Frame = -1
Query: 666 DPLDDIFADEAVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSELSEPVG 487
D LDDIFA A K +A GKFQPKAK R +K D+ ++ SE +
Sbjct: 2 DLLDDIFAGGASKTVKAGGKFQPKAKPRSLKKGPAVASSSLTSKPTG-DTVATDSSEALK 60
Query: 486 TAKPSENL----------------------------VSGSDAVPNDNGAWHSFMEKSVGE 391
+ K S+N + S + ++N W S EKS GE
Sbjct: 61 SGKNSQNCDEQSSVLAEPSLVHPLAAETLVPSVGSSLDASMVITDNNENWKSCFEKSEGE 120
Query: 390 NADIFIELEALGDFLPHTSSDMECTVPPSEAVALNVPN-------PEDARGGRAIPVFSS 232
NADI+I L++ D LPH+S + PS A A P + G A +
Sbjct: 121 NADIYIGLDSFDDLLPHSSG-----IDPSAAHAAGAEKQQEQLLIPVSSVDGSAHSASNL 175
Query: 231 VEDSLTAGEPNVPSSDGRDHMHDSDLGREVMDAMDSI--NMTELTTKSGHRKGKFQPKPK 58
D + AG+ P + + S + MD S+ ++ +TT SG + +FQPKPK
Sbjct: 176 QSDEVAAGQD--PLTFQASVLSVSGSCQMEMDTYSSLEADILGVTTISGQSR-RFQPKPK 232
Query: 57 IQMHKE 40
+Q+++E
Sbjct: 233 LQVYRE 238
>ref|XP_006487245.1| PREDICTED: transcription factor TFIIIB component B'' homolog
isoform X2 [Citrus sinensis]
Length = 722
Score = 66.2 bits (160), Expect = 9e-09
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 29/241 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAKP------SENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEQFKENESSENALYSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E V EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPVLIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMDAMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEASK 22
+ G + D+ L RE A +N + T++ SG R K++P+P+++ E S
Sbjct: 183 NAGGIPVDDARLEREQDGAFPDLNCLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNISS 242
Query: 21 M 19
+
Sbjct: 243 V 243
>ref|XP_006423360.1| hypothetical protein CICLE_v10027900mg [Citrus clementina]
gi|557525294|gb|ESR36600.1| hypothetical protein
CICLE_v10027900mg [Citrus clementina]
Length = 722
Score = 65.5 bits (158), Expect = 1e-08
Identities = 66/241 (27%), Positives = 101/241 (41%), Gaps = 29/241 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAK------PSENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEHFKENESSENALHSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPALIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMDAMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEASK 22
+ G + D+ L RE A +N + T++ SG R K++P+P+++ E S
Sbjct: 183 NAGGIPVDDARLEREQDGAFPDLNFLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNISS 242
Query: 21 M 19
+
Sbjct: 243 V 243
>ref|XP_006487247.1| PREDICTED: transcription factor TFIIIB component B'' homolog
isoform X4 [Citrus sinensis]
Length = 697
Score = 65.1 bits (157), Expect = 2e-08
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAKP------SENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEQFKENESSENALYSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E V EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPVLIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMD--AMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEA 28
+ G + D+ L REV A +N + T++ SG R K++P+P+++ E
Sbjct: 183 NAGGIPVDDARLEREVQQDGAFPDLNCLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNI 242
Query: 27 SKM 19
S +
Sbjct: 243 SSV 245
>ref|XP_006487246.1| PREDICTED: transcription factor TFIIIB component B'' homolog
isoform X3 [Citrus sinensis]
Length = 702
Score = 65.1 bits (157), Expect = 2e-08
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAKP------SENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEQFKENESSENALYSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E V EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPVLIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMD--AMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEA 28
+ G + D+ L REV A +N + T++ SG R K++P+P+++ E
Sbjct: 183 NAGGIPVDDARLEREVQQDGAFPDLNCLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNI 242
Query: 27 SKM 19
S +
Sbjct: 243 SSV 245
>ref|XP_006487244.1| PREDICTED: transcription factor TFIIIB component B'' homolog
isoform X1 [Citrus sinensis]
Length = 724
Score = 65.1 bits (157), Expect = 2e-08
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAKP------SENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEQFKENESSENALYSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E V EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPVLIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMD--AMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEA 28
+ G + D+ L REV A +N + T++ SG R K++P+P+++ E
Sbjct: 183 NAGGIPVDDARLEREVQQDGAFPDLNCLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNI 242
Query: 27 SKM 19
S +
Sbjct: 243 SSV 245
>ref|XP_006423359.1| hypothetical protein CICLE_v10027900mg [Citrus clementina]
gi|557525293|gb|ESR36599.1| hypothetical protein
CICLE_v10027900mg [Citrus clementina]
Length = 702
Score = 64.3 bits (155), Expect = 3e-08
Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAK------PSENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEHFKENESSENALHSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPALIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMD--AMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEA 28
+ G + D+ L REV A +N + T++ SG R K++P+P+++ E
Sbjct: 183 NAGGIPVDDARLEREVQQDGAFPDLNFLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNI 242
Query: 27 SKM 19
S +
Sbjct: 243 SSV 245
>ref|XP_006423357.1| hypothetical protein CICLE_v10027900mg [Citrus clementina]
gi|567861408|ref|XP_006423358.1| hypothetical protein
CICLE_v10027900mg [Citrus clementina]
gi|557525291|gb|ESR36597.1| hypothetical protein
CICLE_v10027900mg [Citrus clementina]
gi|557525292|gb|ESR36598.1| hypothetical protein
CICLE_v10027900mg [Citrus clementina]
Length = 724
Score = 64.3 bits (155), Expect = 3e-08
Identities = 67/243 (27%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Frame = -1
Query: 654 DIFADE---AVKNARAVGKFQPKAKFRPTRKEXXXXXXXXXXXXXTIDSTQSEL--SEPV 490
D+FADE AV + R G+FQPKAK RP R E +D S + SE V
Sbjct: 6 DLFADESGPAVNHVR--GRFQPKAKPRP-RNERTASVDVIDKDSQLLDPVVSSVPASEVV 62
Query: 489 GTAK------PSENLVSGSDAVPNDNGAWHSFMEKSVGENADIFIELEALGDFLPHTSSD 328
T + SEN + + G S +K+ G+NAD+ LE+L DF +S+
Sbjct: 63 RTVEHFKENESSENALHSEVTASDGCGDLLSSFQKAAGQNADVLSGLESLNDFQSQSSNG 122
Query: 327 MECTV------PPSEAVALN--------VPNPEDARGGRAIPVFSSVEDSLTAGEPNVPS 190
E EAV P DA +D ++ G+ + +
Sbjct: 123 TEMPALIVSDYNGGEAVVFEGLSSDNNAAPGVCDAAQAETSADMFLTQDPISCGQAALTN 182
Query: 189 SDGRDHMHDSDLGREVMD--AMDSINMTELTTK----SGHRKGKFQPKPKIQMHKEMCEA 28
+ G + D+ L REV A +N + T++ SG R K++P+P+++ E
Sbjct: 183 NAGGIPVDDARLEREVQQDGAFPDLNFLDSTSEEAVASGQRAAKYKPRPQVRTESEKFNI 242
Query: 27 SKM 19
S +
Sbjct: 243 SSV 245
>gb|ABW81081.1| TF2 [Cleome spinosa]
Length = 660
Score = 57.4 bits (137), Expect = 4e-06
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 25/231 (10%)
Frame = -1
Query: 669 FDPLDDIFADEAVKNARAVGKFQPKAKFRPTR-------------KEXXXXXXXXXXXXX 529
F LDDIF + A ARA GKF+PKAK RP + E
Sbjct: 61 FMDLDDIFLEPAAAGARAGGKFKPKAKPRPKKLASVSAAAELPNGNEETPPMQDLSCGGE 120
Query: 528 TIDSTQSELSEPVGTAKPSENLVSGSDAVPNDNGAWHSFMEKSV-GENADIF-------I 373
D + E++ T + + S+ V D+G + F + ++ ENAD+F +
Sbjct: 121 DPDGLKGEVAR---TKSANLSNTLPSETVVPDSGTINQFTDGTILEENADVFSGGIHSSM 177
Query: 372 ELEALGDFLPHTSSDMECTVPPSEAVALNVPNPEDARGGRAIPVFSSVEDSLTAGEPNVP 193
E AL P T+ D E + + +++P P + +DS+ + P
Sbjct: 178 EAAALH---PWTNVDSEKRMDDN----IDIP---------VFPGYPGTQDSVMFTDFIAP 221
Query: 192 SSDGRDHMHDSDLGREVMD---AMDSINMTEL-TTKSGHRKGKFQPKPKIQ 52
DG H + E + M+++++ E TT G GKFQPKPK Q
Sbjct: 222 EIDGGIHAQNGGTQTEEEEYCLDMETLDIIEKGTTTYGQHSGKFQPKPKFQ 272