BLASTX nr result
ID: Rehmannia22_contig00016015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00016015
(710 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra... 150 4e-34
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra... 128 2e-27
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259... 100 5e-19
ref|XP_002529152.1| conserved hypothetical protein [Ricinus comm... 100 8e-19
ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843... 95 2e-17
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus... 93 7e-17
gb|EOY02124.1| Phytochrome and flowering time regulatory protein... 92 2e-16
gb|EOY02123.1| Phytochrome and flowering time regulatory protein... 92 2e-16
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra... 89 1e-15
ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II tra... 87 4e-15
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra... 87 4e-15
gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlise... 83 8e-14
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot... 83 8e-14
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra... 82 1e-13
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr... 82 1e-13
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra... 80 5e-13
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra... 80 5e-13
ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II tra... 79 1e-12
gb|EXC06056.1| hypothetical protein L484_009967 [Morus notabilis] 78 3e-12
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu... 75 2e-11
>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum tuberosum]
Length = 819
Score = 150 bits (379), Expect = 4e-34
Identities = 103/241 (42%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNVISSGMXXXXXXXXXXXX 530
RPV AAANV+ILN VAQA Q L GGTSIGL SMGGTPMLS++ISSGM
Sbjct: 354 RPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQAVLS 413
Query: 529 SG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQASVSM-G 362
SG +T++ G++P+ +++GNS+I +SQ L+N Q VSM G
Sbjct: 414 SGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSNISISQPLNNNQRGVSMTG 473
Query: 361 QTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
QT+P MSQG+L P
Sbjct: 474 QTVPGMSQGNL--PGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQ 531
Query: 181 XXXXXXXVTNMPLNXXXXXXXXXXXS-KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 5
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 532 PVGVNSTSANMPLSQQQTSAALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 591
Query: 4 E 2
E
Sbjct: 592 E 592
>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum lycopersicum]
Length = 805
Score = 128 bits (321), Expect = 2e-27
Identities = 94/240 (39%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNVISSGMXXXXXXXXXXXX 530
RPV AAANV+ILN VAQA Q L GGTSIGL SMGGTPMLS++ISSGM
Sbjct: 354 RPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQAVLS 413
Query: 529 SG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQASVSMGQ 359
SG +T++ G++P+ N+ S ++ S+S GQ
Sbjct: 414 SGQSGVTTMTGAVPLA-------------------GSAQNTQNSAPSSFTSTAPSMS-GQ 453
Query: 358 TLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 179
T+P+MSQG+ +P
Sbjct: 454 TVPAMSQGN--IPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQP 511
Query: 178 XXXXXXVTNMPLNXXXXXXXXXXXS-KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 512 VGVNSTSANMPLSQQQTSGALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 571
>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
Length = 827
Score = 100 bits (249), Expect = 5e-19
Identities = 68/139 (48%), Positives = 84/139 (60%), Gaps = 11/139 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV AAANV ILN+++QARQ AL+GGTSIGL SMGGT M +SN+ISSGM
Sbjct: 357 RPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSV 416
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ++SI GS + SN++ NS++G+SQ LSNL
Sbjct: 417 PATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNL 476
Query: 382 QASVSMGQTLPSMSQGSLP 326
Q VSMGQT+P MSQG+LP
Sbjct: 477 QGGVSMGQTVPGMSQGNLP 495
Score = 75.5 bits (184), Expect = 2e-11
Identities = 39/51 (76%), Positives = 39/51 (76%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NMPL SKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 552 NMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 602
>ref|XP_002529152.1| conserved hypothetical protein [Ricinus communis]
gi|223531431|gb|EEF33265.1| conserved hypothetical
protein [Ricinus communis]
Length = 561
Score = 99.8 bits (247), Expect = 8e-19
Identities = 66/138 (47%), Positives = 82/138 (59%), Gaps = 11/138 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV AANV ILN+++QARQ AL GGTSIGLPS+ TP+ +SN+ISSGM
Sbjct: 315 RPVPPGAANVSILNNLSQARQVMNSAALTGGTSIGLPSINQTPVAMHMSNMISSGMASSV 374
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ITSI GS + +NV+GNS++GMSQ + NL
Sbjct: 375 PAAQTVFSSGQTGITSITGSGTLTGTTQIAPNSGLGSFTSTTTNVSGNSNLGMSQPMGNL 434
Query: 382 QASVSMGQTLPSMSQGSL 329
QA VSMGQ++P MSQG+L
Sbjct: 435 QAGVSMGQSVPGMSQGNL 452
Score = 75.1 bits (183), Expect = 2e-11
Identities = 38/51 (74%), Positives = 39/51 (76%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NMPL+ SKYVKVWEGNLSGQRQGQPVFITRLEGYRS SASE
Sbjct: 510 NMPLSQQTASALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSGSASE 560
>ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843505 [Brachypodium
distachyon]
Length = 771
Score = 95.1 bits (235), Expect = 2e-17
Identities = 72/235 (30%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Frame = -2
Query: 697 GAAANVRILNDVAQARQALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXXXXXS 527
G ANV ILN+++Q R +L+G TS+G P+MG TP+ +SN+ISSGM
Sbjct: 358 GGPANVSILNNLSQHRHSLSGATSMG-PNMGATPIQVHMSNMISSGMTSTPSV------- 409
Query: 526 GITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQASVSMGQTLPS 347
I+S++G++ S V+GNS++ +S SL+N+Q +++ Q++P
Sbjct: 410 -ISSMSGTVQPTGAQQLVQNTALGSFGSNNSTVSGNSNVAVSSSLANIQNNIATAQSVPP 468
Query: 346 MSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 167
M+QG L
Sbjct: 469 MAQGGLMSGSHGSQSGQGGIGTNQNMISSLGPTAISSAPAMMPTPGMTQQAGVNSLSVNN 528
Query: 166 XXVTNMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NMP+ K +WEG LSGQRQGQPVFI +LEGYRS +AS+
Sbjct: 529 SSAMNMPMPQQPNGQQQSKYVK---IWEGTLSGQRQGQPVFICKLEGYRSGTASD 580
>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
Length = 863
Score = 93.2 bits (230), Expect = 7e-17
Identities = 64/141 (45%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV ANV ILN+++QARQ AL+GGTS+GLPSMG TP+ +SN+ISSGM
Sbjct: 359 RPVNPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSV 418
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ITSI S P+ SN++ +S+IG+SQ L NL
Sbjct: 419 PAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIGISQPLGNL 478
Query: 382 QASVSMGQTLPSMSQGSLPVP 320
Q +VSMGQ MSQG+L P
Sbjct: 479 QGAVSMGQQASGMSQGNLSGP 499
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NMPL+ SKYVKVWEG+LSGQRQGQPVFIT+LEGYR++SASE
Sbjct: 552 NMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSASE 602
>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
[Theobroma cacao]
Length = 860
Score = 92.0 bits (227), Expect = 2e-16
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 10/136 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXX 551
RPV AANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 347 RPVP-PAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVP 405
Query: 550 XXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQ 380
SG +TS+ GS + SNVT NS+IGMSQ + N+Q
Sbjct: 406 PAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQ 465
Query: 379 ASVSMGQTLPSMSQGS 332
+ VSMGQ++P MSQG+
Sbjct: 466 SGVSMGQSVPGMSQGN 481
Score = 74.7 bits (182), Expect = 3e-11
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
+MPL+ SKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 539 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 589
>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
[Theobroma cacao]
Length = 871
Score = 92.0 bits (227), Expect = 2e-16
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 10/136 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXX 551
RPV AANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 358 RPVP-PAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVP 416
Query: 550 XXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQ 380
SG +TS+ GS + SNVT NS+IGMSQ + N+Q
Sbjct: 417 PAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQ 476
Query: 379 ASVSMGQTLPSMSQGS 332
+ VSMGQ++P MSQG+
Sbjct: 477 SGVSMGQSVPGMSQGN 492
Score = 74.7 bits (182), Expect = 3e-11
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
+MPL+ SKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 550 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 600
>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Glycine max]
Length = 877
Score = 89.4 bits (220), Expect = 1e-15
Identities = 61/138 (44%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV ANV ILN+++QARQ AL+GGTS+GLPSMG TP+ +SN+ISSGM
Sbjct: 356 RPVNPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSV 415
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ITS+ S P+ SN++ +S+IG+SQ L NL
Sbjct: 416 PAAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475
Query: 382 QASVSMGQTLPSMSQGSL 329
Q VS+GQ + MSQG+L
Sbjct: 476 QGVVSIGQQVSGMSQGNL 493
Score = 71.2 bits (173), Expect = 3e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NMPL+ SKYVKVWEG+LSGQRQGQPVFIT+LEGYR++SASE
Sbjct: 549 NMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSASE 599
>ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X3 [Glycine max]
Length = 725
Score = 87.4 bits (215), Expect = 4e-15
Identities = 61/138 (44%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV A ANV ILN+++ ARQ AL+GGTS+GLPSM TP+ +SN+ISSGM
Sbjct: 249 RPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISSGMTSSV 308
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ITS+ S P+ SN++ +S+IG+SQ L NL
Sbjct: 309 PAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 368
Query: 382 QASVSMGQTLPSMSQGSL 329
Q +VSMGQ + MSQG+L
Sbjct: 369 QGAVSMGQQVSGMSQGNL 386
Score = 73.2 bits (178), Expect = 8e-11
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -2
Query: 157 TNMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
TNMPL+ SKYVKVWEG+LSGQRQGQPVFIT+LEGYR++SASE
Sbjct: 441 TNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSASE 492
>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Glycine max]
gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X2 [Glycine max]
Length = 832
Score = 87.4 bits (215), Expect = 4e-15
Identities = 61/138 (44%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV A ANV ILN+++ ARQ AL+GGTS+GLPSM TP+ +SN+ISSGM
Sbjct: 356 RPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISSGMTSSV 415
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ITS+ S P+ SN++ +S+IG+SQ L NL
Sbjct: 416 PAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475
Query: 382 QASVSMGQTLPSMSQGSL 329
Q +VSMGQ + MSQG+L
Sbjct: 476 QGAVSMGQQVSGMSQGNL 493
Score = 73.2 bits (178), Expect = 8e-11
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -2
Query: 157 TNMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
TNMPL+ SKYVKVWEG+LSGQRQGQPVFIT+LEGYR++SASE
Sbjct: 548 TNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSASE 599
>gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlisea aurea]
Length = 527
Score = 83.2 bits (204), Expect = 8e-14
Identities = 60/135 (44%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNVISSGM-----XXXXXXX 545
RPVGGAAANVRILNDVAQ RQALA G SI GG PMLSN+IS+G+
Sbjct: 357 RPVGGAAANVRILNDVAQ-RQALAAGASI-----GGAPMLSNMISNGVTSSSAQNVAPSS 410
Query: 544 XXXXXSGITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSL--SNLQASV 371
+ S +LP+P V+G+SS G+SQ + +NLQ +
Sbjct: 411 GPSAAAASVSSGSTLPVPAAPF----------------VSGSSSHGISQPMNNNNLQGNG 454
Query: 370 SMGQTLPSMSQGSLP 326
++GQT+ SMSQG+LP
Sbjct: 455 NIGQTIQSMSQGNLP 469
>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
FLOWERING TIME 1 family protein [Populus trichocarpa]
Length = 796
Score = 83.2 bits (204), Expect = 8e-14
Identities = 59/139 (42%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQA-----LAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RP AAANV ILN+++QARQ L+GGTS+GLPS+ T + +SN+ISSGM
Sbjct: 349 RPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISSGMASSV 408
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIG-MSQSLSN 386
SG ++SI GS + SNV+GNS++G +SQ + N
Sbjct: 409 PAAPTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRISQPMGN 468
Query: 385 LQASVSMGQTLPSMSQGSL 329
LQA VS+GQ+ P MSQG++
Sbjct: 469 LQAGVSIGQSAPGMSQGNI 487
Score = 72.4 bits (176), Expect = 1e-10
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 103 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 562 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 595
>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Citrus sinensis]
Length = 829
Score = 82.4 bits (202), Expect = 1e-13
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGM---X 563
RP+ AAANV ILN+++QARQ AL GGTSIGL SMG TPM +SN+ISSGM
Sbjct: 355 RPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSV 414
Query: 562 XXXXXXXXXXXSGITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SGITSI GS + SN++GNS+ +SQ + L
Sbjct: 415 PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 474
Query: 382 QASVSMGQTLPSMSQGS 332
Q SMGQ++ MSQG+
Sbjct: 475 QGGASMGQSV-GMSQGN 490
Score = 70.5 bits (171), Expect = 5e-10
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NM L+ SKYVKVWEG+LSGQRQGQPVFIT+LEGYRSASASE
Sbjct: 549 NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSASASE 599
>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
hypothetical protein CICLE_v10030710mg [Citrus
clementina]
Length = 830
Score = 82.4 bits (202), Expect = 1e-13
Identities = 61/137 (44%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGM---X 563
RP+ AAANV ILN+++QARQ AL GGTSIGL SMG TPM +SN+ISSGM
Sbjct: 356 RPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSV 415
Query: 562 XXXXXXXXXXXSGITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SGITSI GS + SN++GNS+ +SQ + L
Sbjct: 416 PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 475
Query: 382 QASVSMGQTLPSMSQGS 332
Q SMGQ++ MSQG+
Sbjct: 476 QGGASMGQSV-GMSQGN 491
Score = 70.5 bits (171), Expect = 5e-10
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
NM L+ SKYVKVWEG+LSGQRQGQPVFIT+LEGYRSASASE
Sbjct: 550 NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSASASE 600
>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Cucumis sativus]
Length = 595
Score = 80.5 bits (197), Expect = 5e-13
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 10/130 (7%)
Frame = -2
Query: 688 ANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXXXXX 530
ANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 361 ANVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPAAQNVFS 420
Query: 529 SG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQASVSMGQ 359
SG +TSI GS T +N++GN +I SQ++ NLQ SVS+ Q
Sbjct: 421 SGQSGMTSINGS---STLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGSVSVSQ 477
Query: 358 TLPSMSQGSL 329
++P +SQG+L
Sbjct: 478 SVPGISQGNL 487
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -2
Query: 103 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
KYVK WEGNLSGQRQGQPVFITR+EGYRSASAS+
Sbjct: 562 KYVKFWEGNLSGQRQGQPVFITRMEGYRSASASD 595
>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Cucumis sativus]
Length = 858
Score = 80.5 bits (197), Expect = 5e-13
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 10/130 (7%)
Frame = -2
Query: 688 ANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXXXXX 530
ANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 361 ANVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPAAQNVFS 420
Query: 529 SG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQASVSMGQ 359
SG +TSI GS T +N++GN +I SQ++ NLQ SVS+ Q
Sbjct: 421 SGQSGMTSINGS---STLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGSVSVSQ 477
Query: 358 TLPSMSQGSL 329
++P +SQG+L
Sbjct: 478 SVPGISQGNL 487
Score = 68.6 bits (166), Expect = 2e-09
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -2
Query: 103 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
KYVK WEGNLSGQRQGQPVFITR+EGYRSASAS+
Sbjct: 562 KYVKFWEGNLSGQRQGQPVFITRMEGYRSASASD 595
>ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Cicer arietinum]
Length = 818
Score = 79.0 bits (193), Expect = 1e-12
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 554
RPV A N ILN+++QARQ AL+GGTS+GLPSMG TP+ +SN+ISS
Sbjct: 358 RPVNPAQVNGNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSATTSSG 417
Query: 553 XXXXXXXXSG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNL 383
SG ITSI S + SN++ +S+ G+SQSL+NL
Sbjct: 418 PTGQNVFSSGPPVITSITSSGSLTAPAQVAQNTGLASLTSATSNLSSSSNTGISQSLANL 477
Query: 382 QASVSMGQTLPSMSQGSL 329
Q +VSMGQ M+ G+L
Sbjct: 478 QGAVSMGQQASGMNPGNL 495
Score = 66.6 bits (161), Expect = 7e-09
Identities = 29/34 (85%), Positives = 34/34 (100%)
Frame = -2
Query: 103 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
KY++VWEG+LSGQRQGQPVFIT+LEGYRS+SASE
Sbjct: 564 KYIRVWEGSLSGQRQGQPVFITKLEGYRSSSASE 597
>gb|EXC06056.1| hypothetical protein L484_009967 [Morus notabilis]
Length = 607
Score = 77.8 bits (190), Expect = 3e-12
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Frame = -2
Query: 709 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXX 539
RPVG A ANV ILN+++ RQ + S LP MG TP+ +SN+ISSGM
Sbjct: 333 RPVGPAPANVNILNNLSAKRQVI---NSAALP-MGQTPIGMHMSNMISSGMASSTPAQNT 388
Query: 538 XXXS--GITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSIGMSQSLSNLQASVSM 365
ITS+ GS P+ NV+GNS+IG+SQ ++NLQ VSM
Sbjct: 389 LPSGQPAITSLPGSGPLTQVTQTPGLSTFSAATS---NVSGNSNIGVSQPMNNLQGGVSM 445
Query: 364 GQTLPSMSQGSL 329
GQ++P+MSQG++
Sbjct: 446 GQSVPTMSQGNI 457
>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
gi|550332870|gb|EEE88812.2| hypothetical protein
POPTR_0008s11650g [Populus trichocarpa]
Length = 896
Score = 75.5 bits (184), Expect = 2e-11
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -2
Query: 154 NMPLNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 2
N+PL+ SKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE
Sbjct: 559 NLPLSQQTAGGLQPAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 609
Score = 63.9 bits (154), Expect = 5e-08
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Frame = -2
Query: 694 AAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGM---XXXXXX 548
AAANV ILN+++QARQ AL+GGTSIGLPS+ T + +S++ISSGM
Sbjct: 363 AAANVNILNNLSQARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMTSSVPAAQT 422
Query: 547 XXXXXXSGITSIAGSLPIPTXXXXXXXXXXXXXXXXXSNVTGNSSI-GMSQSLSNLQASV 371
G++SI GS + SN+ GNS++ G+SQ + NL A V
Sbjct: 423 VFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMGNLHAGV 482
Query: 370 SMGQTLPS 347
S+ Q+ S
Sbjct: 483 SISQSAMS 490