BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00016010
         (1190 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   719   0.0  
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      719   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   719   0.0  
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   718   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   718   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   718   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         717   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   713   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              709   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   709   0.0  
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...   695   0.0  
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ...   687   0.0  
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   687   0.0  
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [...   682   0.0  
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   682   0.0  
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   681   0.0  
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr...   681   0.0  
ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   681   0.0  
ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   677   0.0  
gb|ESW28387.1| hypothetical protein PHAVU_003G282700g [Phaseolus...   677   0.0  

>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  719 bits (1857), Expect = 0.0
 Identities = 336/396 (84%), Positives = 369/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAFVHTLK+VET++G
Sbjct: 343  QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKG 402

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++G YLFLPSYIMRTHGAK
Sbjct: 403  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAK 462

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW+VN+K+LG+VDRIWA+GGRLADLVDR+DVPL
Sbjct: 463  QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPL 522

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PE PDTEDE+E+           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF
Sbjct: 523  PEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 582

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLK+HLAN+YGGGVDKLSYEGR+
Sbjct: 583  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRV 642

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENHL+DIFDSA+RPLEGKRWWLGAEDPFQCLATCIN++EALRSP PE+ ISYMP+HQ
Sbjct: 643  AFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 702

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 703  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 738


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  719 bits (1857), Expect = 0.0
 Identities = 336/396 (84%), Positives = 369/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAFVHTLK+VET++G
Sbjct: 56   QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKG 115

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++G YLFLPSYIMRTHGAK
Sbjct: 116  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAK 175

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW+VN+K+LG+VDRIWA+GGRLADLVDR+DVPL
Sbjct: 176  QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPL 235

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PE PDTEDE+E+           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF
Sbjct: 236  PEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 295

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLK+HLAN+YGGGVDKLSYEGR+
Sbjct: 296  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRV 355

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENHL+DIFDSA+RPLEGKRWWLGAEDPFQCLATCIN++EALRSP PE+ ISYMP+HQ
Sbjct: 356  AFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 415

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 416  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 451


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  719 bits (1856), Expect = 0.0
 Identities = 334/396 (84%), Positives = 372/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGC+LIQIL +TAYIQPP DQ++D PPDIRPAF+HTLK+VETV+G
Sbjct: 334  QQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTVETVKG 393

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP +W+GY+RGAYLFLPSYIMRTHGAK
Sbjct: 394  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAK 453

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW+VNK++LG++DRIWA+GGRLADLVDR+DVPL
Sbjct: 454  QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPL 513

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PEEPDTEDE E+           KEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDF
Sbjct: 514  PEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDF 573

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGL WLK+HLAN+YGGGVDKLSYEGR 
Sbjct: 574  RGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRA 633

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENH++DIFDSADRPLEG+RWWLGAEDPFQCLATCIN+SEALRSP PE++IS+MP+HQ
Sbjct: 634  AFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQ 693

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 694  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 729


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  718 bits (1853), Expect = 0.0
 Identities = 334/396 (84%), Positives = 370/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAFVHTLK+VET++G
Sbjct: 343  QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKG 402

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++GAYLFLPSYIMRTHGAK
Sbjct: 403  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAK 462

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW++N+K+LG+VDRIWA+GGRLADLVDR+DVPL
Sbjct: 463  QQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPL 522

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PEEPD EDE+++           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF
Sbjct: 523  PEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 582

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+YGGGVDKLSYEGR+
Sbjct: 583  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRV 642

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENH++DIFDSA+RPLEGKRWWLGAEDPFQCLATCIN++EALRSP PE+ ISYMP+HQ
Sbjct: 643  AFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 702

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYS
Sbjct: 703  DGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYS 738


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  718 bits (1853), Expect = 0.0
 Identities = 334/396 (84%), Positives = 370/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAFVHTLK+VET++G
Sbjct: 343  QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKG 402

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++GAYLFLPSYIMRTHGAK
Sbjct: 403  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAK 462

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW++N+K+LG+VDRIWA+GGRLADLVDR+DVPL
Sbjct: 463  QQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPL 522

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PEEPD EDE+++           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF
Sbjct: 523  PEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 582

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+YGGGVDKLSYEGR+
Sbjct: 583  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRV 642

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENH++DIFDSA+RPLEGKRWWLGAEDPFQCLATCIN++EALRSP PE+ ISYMP+HQ
Sbjct: 643  AFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 702

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYS
Sbjct: 703  DGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYS 738


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  718 bits (1853), Expect = 0.0
 Identities = 334/396 (84%), Positives = 370/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAFVHTLK+VET++G
Sbjct: 343  QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKG 402

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++GAYLFLPSYIMRTHGAK
Sbjct: 403  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAK 462

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW++N+K+LG+VDRIWA+GGRLADLVDR+DVPL
Sbjct: 463  QQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPL 522

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PEEPD EDE+++           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF
Sbjct: 523  PEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 582

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+YGGGVDKLSYEGR+
Sbjct: 583  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRV 642

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENH++DIFDSA+RPLEGKRWWLGAEDPFQCLATCIN++EALRSP PE+ ISYMP+HQ
Sbjct: 643  AFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 702

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRD LGAAAVNLVAGDKPADVYS
Sbjct: 703  DGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYS 738


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  717 bits (1852), Expect = 0.0
 Identities = 335/396 (84%), Positives = 369/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ++D PPDIRPAFVHTLK+VET++G
Sbjct: 343  QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKG 402

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP SW GY++G YLFLPSYIMRTHGAK
Sbjct: 403  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAK 462

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW+VN+K+LG+V+RIWA+GGRLADLVDR+DVPL
Sbjct: 463  QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPL 522

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PE PDTEDE+E+           KEN ERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF
Sbjct: 523  PEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 582

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLK+HLAN+YGGGVDKLSYEGR+
Sbjct: 583  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRV 642

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENHL+DIFDSA+RPLEGKRWWLGAEDPFQCLATCIN++EALRSP PE+ ISYMP+HQ
Sbjct: 643  AFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQ 702

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 703  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 738


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score =  713 bits (1840), Expect = 0.0
 Identities = 332/396 (83%), Positives = 371/396 (93%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSVETVRG 1010
            QQDD KPWGQD  VKVGCRLIQIL +TAYIQPP DQ+ED PPDIRPAF+HTLK+V+TV+G
Sbjct: 334  QQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVDTVKG 393

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVI+CDPLVRKGL+KTARHMVIPYMPMLVPP +W+GY+RGAYLFLPSYIMRTHGAK
Sbjct: 394  SRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAK 453

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQREAVKR PK+QLEP+FQAL+TLGNTKW+VNK++LG++DRIWA+GGRLADLVDR+DVPL
Sbjct: 454  QQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPL 513

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PEEPDTE+E E+           KEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDF
Sbjct: 514  PEEPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDF 573

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGL WLK+HLAN+YGGGVDKLS EGR 
Sbjct: 574  RGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRA 633

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +F+ENH++DIFDSADRPLEG+RWWLGAEDPFQCLATCI++SEALRSP PE++IS+MP+HQ
Sbjct: 634  AFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQ 693

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS
Sbjct: 694  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 729


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  709 bits (1831), Expect = 0.0
 Identities = 333/398 (83%), Positives = 369/398 (92%), Gaps = 2/398 (0%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETV 1016
            +QDD KPWGQDA VKVG RLI++L +TAYIQPP DQ+ D PPDIRPAFVHTLK+V  ET 
Sbjct: 149  RQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQ 208

Query: 1015 RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 836
            +GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPL+WTGY++GAYLFLPSY+MR HG
Sbjct: 209  KGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHG 268

Query: 835  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 656
            A+QQREA+KR+P++ LEP F+ALNTLGNTKW++NK++LGV+DRIWA+GGRLADLVDR+DV
Sbjct: 269  ARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDV 328

Query: 655  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 476
            PLPEEPDTEDE+E+           KENSERHSQRCDIELKLAVARKMKDEDGF+YPHNL
Sbjct: 329  PLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 388

Query: 475  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEG 296
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+Y GGVDKLSYEG
Sbjct: 389  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEG 448

Query: 295  RMSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPV 116
            R++FTENHL+DIFDSADRPLEG+RWWL AEDPFQCLATCINLSEALRS  PE+TIS+MPV
Sbjct: 449  RVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPV 508

Query: 115  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYS
Sbjct: 509  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 546


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  709 bits (1831), Expect = 0.0
 Identities = 333/398 (83%), Positives = 369/398 (92%), Gaps = 2/398 (0%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETV 1016
            +QDD KPWGQDA VKVG RLI++L +TAYIQPP DQ+ D PPDIRPAFVHTLK+V  ET 
Sbjct: 317  RQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQ 376

Query: 1015 RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 836
            +GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPL+WTGY++GAYLFLPSY+MR HG
Sbjct: 377  KGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHG 436

Query: 835  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 656
            A+QQREA+KR+P++ LEP F+ALNTLGNTKW++NK++LGV+DRIWA+GGRLADLVDR+DV
Sbjct: 437  ARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDV 496

Query: 655  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 476
            PLPEEPDTEDE+E+           KENSERHSQRCDIELKLAVARKMKDEDGF+YPHNL
Sbjct: 497  PLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNL 556

Query: 475  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEG 296
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLAN+Y GGVDKLSYEG
Sbjct: 557  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEG 616

Query: 295  RMSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPV 116
            R++FTENHL+DIFDSADRPLEG+RWWL AEDPFQCLATCINLSEALRS  PE+TIS+MPV
Sbjct: 617  RVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPV 676

Query: 115  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYS
Sbjct: 677  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 714


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  695 bits (1793), Expect = 0.0
 Identities = 320/398 (80%), Positives = 366/398 (91%), Gaps = 2/398 (0%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETV 1016
            +Q+D+KPWGQ+A VKVGCRLIQ+L  TAYIQPP+DQ+ D PPDIRPAFVH LK++  +T 
Sbjct: 345  EQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQ 404

Query: 1015 RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 836
            + +RRYGVIECDP+VRKG+EKTARHMV+PYMPMLVPP++WTGY+RGAYLFLPSY+MRTHG
Sbjct: 405  KTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHG 464

Query: 835  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 656
            AKQQRE VKR+P++QLEP+F+AL+TLG+TKW+VNK++LGV+DRIWA+GGRLADLVDR+DV
Sbjct: 465  AKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDV 524

Query: 655  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 476
            PLPEEPDTEDE+E+           KENSERHSQRCDIELKLA +RKMKDE+GFYYPHNL
Sbjct: 525  PLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNL 584

Query: 475  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEG 296
            DFRGRAYPMHPYLNHLGSD+CRGILEF+EGR LGKSGL WLK+HLANLY GGVDKLS++ 
Sbjct: 585  DFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDD 644

Query: 295  RMSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPV 116
            R +FTENH+D+IFDSADRPLEG+RWWLGAEDPFQCLA CINL EALRSP PE+TISYMPV
Sbjct: 645  RAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPV 704

Query: 115  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            HQDGSCNGLQHYAALGRDKLGAAAVNLV GDKPADVYS
Sbjct: 705  HQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYS 742


>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
          Length = 932

 Score =  687 bits (1773), Expect = 0.0
 Identities = 320/396 (80%), Positives = 362/396 (91%), Gaps = 2/396 (0%)
 Frame = -2

Query: 1183 DDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVRG 1010
            D  K WGQ+A VKVGCRLIQ+L + AYIQPP+DQ+ D PPDIRPAFVH+LK++  +  +G
Sbjct: 337  DTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKG 396

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVIECD LVRKGLEKTARHMVIPYMPMLVPP +WTGY+RGAYLFLPSY+MRTHGAK
Sbjct: 397  SRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAK 456

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQRE VKR+P++QLEPIF+AL+TLGNTKW++NK++LGVVDR+WANGGR+A LVDR+DVPL
Sbjct: 457  QQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPL 516

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PE+PDTEDE+E+           K+N+ERHS RCD+ELKLAVARKM+DEDGFYYPHNLDF
Sbjct: 517  PEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDF 576

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLK+HLANLY GGVDKLSYEGR+
Sbjct: 577  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRI 636

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +FTENHLDDIFDSADRPLEG+RWWL AEDPFQCLA CINLSEALRS  PE+TIS+MPVHQ
Sbjct: 637  AFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQ 696

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAA+VNLVAG+KPADVYS
Sbjct: 697  DGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYS 732


>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 996

 Score =  687 bits (1773), Expect = 0.0
 Identities = 320/396 (80%), Positives = 362/396 (91%), Gaps = 2/396 (0%)
 Frame = -2

Query: 1183 DDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVRG 1010
            D  K WGQ+A VKVGCRLIQ+L + AYIQPP+DQ+ D PPDIRPAFVH+LK++  +  +G
Sbjct: 337  DTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKG 396

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVIECD LVRKGLEKTARHMVIPYMPMLVPP +WTGY+RGAYLFLPSY+MRTHGAK
Sbjct: 397  SRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAK 456

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQRE VKR+P++QLEPIF+AL+TLGNTKW++NK++LGVVDR+WANGGR+A LVDR+DVPL
Sbjct: 457  QQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPL 516

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PE+PDTEDE+E+           K+N+ERHS RCD+ELKLAVARKM+DEDGFYYPHNLDF
Sbjct: 517  PEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDF 576

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLK+HLANLY GGVDKLSYEGR+
Sbjct: 577  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRI 636

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            +FTENHLDDIFDSADRPLEG+RWWL AEDPFQCLA CINLSEALRS  PE+TIS+MPVHQ
Sbjct: 637  AFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQ 696

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAA+VNLVAG+KPADVYS
Sbjct: 697  DGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYS 732


>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 862

 Score =  682 bits (1759), Expect = 0.0
 Identities = 319/396 (80%), Positives = 358/396 (90%), Gaps = 2/396 (0%)
 Frame = -2

Query: 1183 DDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVRG 1010
            DD  PWGQ+A +KVG RLIQ++ +TAYIQPPIDQ+ D PPDIRPAFVHTLK++  +T + 
Sbjct: 203  DDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVHTLKTITKDTQKS 262

Query: 1009 TRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAK 830
            +RRYGVIECDPLVRKGLEK+ARHMVIPYMPMLVPPL+WTGY++GAY FLPSY+MR HGAK
Sbjct: 263  SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYFFLPSYVMRIHGAK 322

Query: 829  QQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPL 650
            QQR A+KR+ + QLEP+F+AL+TLGNTKW+VNK+ILGV+DRIWA+GG LA LVDR+DVPL
Sbjct: 323  QQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILGVIDRIWASGGHLAGLVDREDVPL 382

Query: 649  PEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDF 470
            PEEP TEDE+E+           KENSERHSQRCD+ELKLAVARKMKDE+GFYYPHN+DF
Sbjct: 383  PEEPQTEDEAEIRKWRWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNVDF 442

Query: 469  RGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRM 290
            RGRAYPMHPYLNHLGSD+CRGILEFAEGRPLGKSGL WLK+HLANLY GGVDKLSY+GR+
Sbjct: 443  RGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRI 502

Query: 289  SFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQ 110
            SFTENHLDDIFDSADRPLEG+RWWLGAEDPFQCLA CINLSEALRSP PE+ IS+ PVHQ
Sbjct: 503  SFTENHLDDIFDSADRPLEGQRWWLGAEDPFQCLAVCINLSEALRSPSPETAISHTPVHQ 562

Query: 109  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            DGSCNGLQHYAALGRDKLGAAAVNLV G KPADVYS
Sbjct: 563  DGSCNGLQHYAALGRDKLGAAAVNLVGGGKPADVYS 598


>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 949

 Score =  682 bits (1759), Expect = 0.0
 Identities = 319/397 (80%), Positives = 361/397 (90%), Gaps = 2/397 (0%)
 Frame = -2

Query: 1186 QDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVR 1013
            QDD K WGQ+AQVKVG RL+Q+L +TAYIQPP + + D PPDIRPAF HTLK++  E+ +
Sbjct: 289  QDDWKAWGQEAQVKVGSRLMQLLIETAYIQPPANLIGDGPPDIRPAFKHTLKTLSSESQK 348

Query: 1012 GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGA 833
             TRRYGVIECDPLV+ GLEK+ARHMVIPYMPMLVPP++WTGY++GAYLFLPSY+MR HGA
Sbjct: 349  ETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHGA 408

Query: 832  KQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVP 653
            KQQREAVKR+PK QL+P+F+ALNTLG+TKW+VNK++L V+D+IWANGGRLADLVDR++VP
Sbjct: 409  KQQREAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDRENVP 468

Query: 652  LPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 473
             P+EPDT+DE+E+           KEN+ERHSQRCDIELKLAVARKMKDE+GFYYPHNLD
Sbjct: 469  EPKEPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLD 528

Query: 472  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGR 293
            FRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGLCWLK+HLANLY GGVDKLSY+GR
Sbjct: 529  FRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLSYDGR 588

Query: 292  MSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVH 113
            + FTENHLDDIFDSADRPLEGKRWWL AEDPFQCLA C NLSEALRSP PE+TIS+MPVH
Sbjct: 589  IEFTENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRSPTPETTISHMPVH 648

Query: 112  QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            QDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYS
Sbjct: 649  QDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYS 685


>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Citrus
            sinensis]
          Length = 980

 Score =  681 bits (1758), Expect = 0.0
 Identities = 319/395 (80%), Positives = 359/395 (90%), Gaps = 2/395 (0%)
 Frame = -2

Query: 1180 DVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVRGT 1007
            D+KPWGQDA VKVGCRLIQ+L +TAYIQPP+DQ+ D+PPDIRPAFVHTLKS   E ++G 
Sbjct: 323  DLKPWGQDALVKVGCRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKG- 381

Query: 1006 RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAKQ 827
            RRYGVIECDPLVRKGLEKT RHM+IPYMPMLVPPL+W GY RG + FLPSY+MRTHGA+Q
Sbjct: 382  RRYGVIECDPLVRKGLEKTGRHMIIPYMPMLVPPLNWRGYNRGGHFFLPSYVMRTHGARQ 441

Query: 826  QREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPLP 647
            QRE +K +P+ QLEP+FQAL+TLG+TKW+VNK+ILGV+DR+WA+GG LA LVD++DVPLP
Sbjct: 442  QRETIKMTPRSQLEPVFQALDTLGSTKWRVNKRILGVIDRMWASGGCLAGLVDQEDVPLP 501

Query: 646  EEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFR 467
            E+PDT+DE+E+           K+NSE+HSQRCDIELKL+VARKMKDE+GFYYPHNLDFR
Sbjct: 502  EKPDTDDETEIKKWKWKVKTAKKQNSEKHSQRCDIELKLSVARKMKDEEGFYYPHNLDFR 561

Query: 466  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRMS 287
            GRAYPMHPYLNHLGSDLCRGILEF EG PLGKSGL WLK+HLANLY GGVDKLSYEGR++
Sbjct: 562  GRAYPMHPYLNHLGSDLCRGILEFEEGCPLGKSGLHWLKIHLANLYAGGVDKLSYEGRVA 621

Query: 286  FTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQD 107
            FTENHLDDIFDSADRPLEG+RWWLGAEDPFQCLATCINLSEALRSP PESTIS++PVH D
Sbjct: 622  FTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLATCINLSEALRSPSPESTISHIPVHMD 681

Query: 106  GSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            GSCNGLQHYAALGRDKLGAAAVNLV GDKPADVYS
Sbjct: 682  GSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYS 716


>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
            gi|557540028|gb|ESR51072.1| hypothetical protein
            CICLE_v10030633mg [Citrus clementina]
          Length = 980

 Score =  681 bits (1758), Expect = 0.0
 Identities = 319/395 (80%), Positives = 359/395 (90%), Gaps = 2/395 (0%)
 Frame = -2

Query: 1180 DVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVRGT 1007
            D+KPWGQDA VKVGCRLIQ+L +TAYIQPP+DQ+ D+PPDIRPAFVHTLKS   E ++G 
Sbjct: 323  DLKPWGQDALVKVGCRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKG- 381

Query: 1006 RRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGAKQ 827
            RRYGVIECDPLVRKGLEKT RHM+IPYMPMLVPPL+W GY RG + FLPSY+MRTHGA+Q
Sbjct: 382  RRYGVIECDPLVRKGLEKTGRHMIIPYMPMLVPPLNWRGYNRGGHFFLPSYVMRTHGARQ 441

Query: 826  QREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVPLP 647
            QRE +K +P+ QLEP+FQAL+TLG+TKW+VNK+ILGV+DR+WA+GG LA LVD++DVPLP
Sbjct: 442  QRETIKMTPRSQLEPVFQALDTLGSTKWRVNKRILGVIDRMWASGGCLAGLVDQEDVPLP 501

Query: 646  EEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFR 467
            E+PDT+DE+E+           K+NSE+HSQRCDIELKL+VARKMKDE+GFYYPHNLDFR
Sbjct: 502  EKPDTDDETEIKKWKWKVKTAKKQNSEKHSQRCDIELKLSVARKMKDEEGFYYPHNLDFR 561

Query: 466  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGRMS 287
            GRAYPMHPYLNHLGSDLCRGILEF EG PLGKSGL WLK+HLANLY GGVDKLSYEGR++
Sbjct: 562  GRAYPMHPYLNHLGSDLCRGILEFEEGCPLGKSGLHWLKIHLANLYAGGVDKLSYEGRVA 621

Query: 286  FTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVHQD 107
            FTENHLDDIFDSADRPLEG+RWWLGAEDPFQCLATCINLSEALRSP PESTIS++PVH D
Sbjct: 622  FTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLATCINLSEALRSPSPESTISHIPVHMD 681

Query: 106  GSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            GSCNGLQHYAALGRDKLGAAAVNLV GDKPADVYS
Sbjct: 682  GSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYS 716


>ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer
            arietinum]
          Length = 1002

 Score =  681 bits (1757), Expect = 0.0
 Identities = 318/397 (80%), Positives = 361/397 (90%), Gaps = 2/397 (0%)
 Frame = -2

Query: 1186 QDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVR 1013
            +D+ KPWGQ+AQVKVG RL+Q+L +TAY+QPP +Q  D+PPDI PAF HTLK+V  ++  
Sbjct: 342  RDEGKPWGQEAQVKVGSRLVQLLIETAYLQPPANQFGDSPPDIYPAFKHTLKTVSADSNN 401

Query: 1012 GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGA 833
            G++RYGVIECDPL++KGLEKTARHMVIPYMPMLVPP +WTG ++GAYLFLPSY+MR HGA
Sbjct: 402  GSKRYGVIECDPLIQKGLEKTARHMVIPYMPMLVPPTNWTGDDKGAYLFLPSYVMRIHGA 461

Query: 832  KQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVP 653
            KQQREAVKR+PK QL+P+F+ALNTLG+TKW+VNK +LGV+D+IWANGGRLADLVDRDD P
Sbjct: 462  KQQREAVKRAPKNQLKPVFEALNTLGDTKWRVNKSVLGVIDQIWANGGRLADLVDRDDTP 521

Query: 652  LPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 473
            LPEEPDTEDE+E+           KENSERHSQRCDIELKLAVARKMK+E+GFYYPHNLD
Sbjct: 522  LPEEPDTEDEAEIRKWKWKVKSVKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLD 581

Query: 472  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGR 293
            FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG+ WLK+HLANLYGGGVDKL Y+GR
Sbjct: 582  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGMQWLKIHLANLYGGGVDKLCYDGR 641

Query: 292  MSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVH 113
            ++FTE+HLDDIFDSADRPLEGKRWWL AEDPFQCLA CINLSEALRS  PE+T+S+MPVH
Sbjct: 642  IAFTEDHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACINLSEALRSDTPETTLSHMPVH 701

Query: 112  QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            QDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYS
Sbjct: 702  QDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYS 738


>ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 957

 Score =  677 bits (1747), Expect = 0.0
 Identities = 320/398 (80%), Positives = 359/398 (90%), Gaps = 2/398 (0%)
 Frame = -2

Query: 1189 QQDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETV 1016
            +QDD K WGQ+AQVKVG RL+Q+L +TAYIQPP +Q+ D PPDI PAF HTL+++  E+ 
Sbjct: 296  RQDDWKTWGQEAQVKVGSRLMQLLIETAYIQPPTNQIGDGPPDIHPAFRHTLRTLSNESQ 355

Query: 1015 RGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHG 836
            R TRRYGVIECDPLV+ GLEK+ARHMVIPYMPMLVPP++WTGY++GAYLFLPSY+MR HG
Sbjct: 356  RETRRYGVIECDPLVQNGLEKSARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRVHG 415

Query: 835  AKQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDV 656
            AKQQREAVKR+PK QL+P+F+ALNTLGNTKW+VNK++L V+D+IWANGGRLADLVDR++V
Sbjct: 416  AKQQREAVKRAPKSQLDPVFEALNTLGNTKWRVNKRVLCVIDQIWANGGRLADLVDRENV 475

Query: 655  PLPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNL 476
            P P+EPDT DE+E+           KENSERHSQRCDIELKLAVARKMKDE+ FYYPHNL
Sbjct: 476  PSPKEPDTIDEAEIRKWKWKVKAVKKENSERHSQRCDIELKLAVARKMKDEEAFYYPHNL 535

Query: 475  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEG 296
            DFRGRAYPMHPYLNHLGSDLCRGILEFAEGR LGKSGL WLK+HLANLY GGVDKLSY+G
Sbjct: 536  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLSYDG 595

Query: 295  RMSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPV 116
            R+SFTENHLDDIFDSADRPLEGK WWL AEDPFQCLA CINLSEALRSP PE+TIS+MPV
Sbjct: 596  RISFTENHLDDIFDSADRPLEGKHWWLQAEDPFQCLAACINLSEALRSPTPETTISHMPV 655

Query: 115  HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            HQDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYS
Sbjct: 656  HQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYS 693


>gb|ESW28387.1| hypothetical protein PHAVU_003G282700g [Phaseolus vulgaris]
          Length = 959

 Score =  677 bits (1746), Expect = 0.0
 Identities = 321/397 (80%), Positives = 357/397 (89%), Gaps = 2/397 (0%)
 Frame = -2

Query: 1186 QDDVKPWGQDAQVKVGCRLIQILTQTAYIQPPIDQMEDAPPDIRPAFVHTLKSV--ETVR 1013
            QD  KPWGQ+AQVKVG RLI++L +TAYIQPP +Q  D PPDIRPAF HTLK++  E+ +
Sbjct: 299  QDYWKPWGQEAQVKVGSRLIEMLIETAYIQPPANQFGDGPPDIRPAFKHTLKTLSNESQK 358

Query: 1012 GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLSWTGYERGAYLFLPSYIMRTHGA 833
             TRRYGVIECD LV+ GLEK+ARH+VIPYMPMLVPP+SWTGY+RGAY FLPSY+MR HGA
Sbjct: 359  ETRRYGVIECDSLVQNGLEKSARHVVIPYMPMLVPPISWTGYDRGAYFFLPSYVMRIHGA 418

Query: 832  KQQREAVKRSPKQQLEPIFQALNTLGNTKWKVNKKILGVVDRIWANGGRLADLVDRDDVP 653
            KQQREAVKR+ K QL+P+F+ALNTLG+TKW+VNK++L V+D+IWANGGRLADLVDRDDVP
Sbjct: 419  KQQREAVKRATKNQLDPVFEALNTLGSTKWRVNKRVLCVMDQIWANGGRLADLVDRDDVP 478

Query: 652  LPEEPDTEDESEMXXXXXXXXXXXKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 473
            LPEEPDTEDE+E+           KEN+ERHSQRCDIELKLAVARKMKDE+GFYYPHNLD
Sbjct: 479  LPEEPDTEDEAEVRKWKWKVKTVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLD 538

Query: 472  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLCWLKVHLANLYGGGVDKLSYEGR 293
            FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLK+HLANLY GGVDKLSY  R
Sbjct: 539  FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYNDR 598

Query: 292  MSFTENHLDDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTISYMPVH 113
            ++FTENHLDDIFDSADRPLEG RWWL AEDPFQCLA C+NLSEALRSP PE+TIS+MPVH
Sbjct: 599  IAFTENHLDDIFDSADRPLEGNRWWLQAEDPFQCLAACMNLSEALRSPNPETTISHMPVH 658

Query: 112  QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYS 2
            QDGSCNGLQHYAALGRDKLGAAAVNLV GD+PADVYS
Sbjct: 659  QDGSCNGLQHYAALGRDKLGAAAVNLVCGDQPADVYS 695