BLASTX nr result

ID: Rehmannia22_contig00015952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00015952
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343828.1| PREDICTED: auxin response factor 9-like [Sol...    67   3e-09
ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicu...    66   4e-09
ref|XP_006352241.1| PREDICTED: auxin response factor 9-like isof...    61   1e-07
ref|XP_006352240.1| PREDICTED: auxin response factor 9-like isof...    61   1e-07
ref|XP_006476352.1| PREDICTED: auxin response factor 9-like isof...    55   7e-06
ref|XP_006476351.1| PREDICTED: auxin response factor 9-like isof...    55   7e-06
ref|XP_006476350.1| PREDICTED: auxin response factor 9-like isof...    55   7e-06

>ref|XP_006343828.1| PREDICTED: auxin response factor 9-like [Solanum tuberosum]
          Length = 655

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
 Frame = +2

Query: 5   KHKRLRTHVEIPVPETMKSTASPAWNLTHDQISRKSPLCVNASSN--------------- 139
           K+KR R H EI + E   S AS  WN + D   + +   +N+S+N               
Sbjct: 371 KNKRHRLHSEIKISEPASSIASAVWNPSLDS-PQFNTSGINSSTNCTLTSRTESGWPLPH 429

Query: 140 -----MIVEEMEESKSASAWSIISNHSGPGSGKQSNNSPASCPNDGRKSDTVVSCRLFGF 304
                M+V+E E+S+SAS W        P  G Q  N P   P D RK +T  +CRLFG 
Sbjct: 430 LNTAGMLVDETEDSRSASTWCGFPCVLAPQFG-QGTNQPIVIPTDERKCNTKTTCRLFGI 488

Query: 305 DLKSSSL 325
           DLK +S+
Sbjct: 489 DLKKTSI 495


>ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
           gi|296245060|gb|ADH03013.1| auxin response factor 9
           [Solanum lycopersicum]
          Length = 644

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 50/127 (39%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
 Frame = +2

Query: 5   KHKRLRTHVEIPVPETMKST-ASPAWN--LTHDQIS----RKSPLCVNAS---------- 133
           K+KR R H EI + E   S+ AS  WN  L   Q +      S  C  AS          
Sbjct: 359 KNKRHRLHSEIKISEQPSSSNASAVWNPSLRSPQFNTFGINSSTNCALASLTESGWQLPH 418

Query: 134 ---SNMIVEEMEESKSASAWSIISNHSGPGSGKQSNNSPASCPNDGRKSDTVVSCRLFGF 304
              S M+V+E E+ +SA  W        P  G Q  N P   P DGRK DT  +CRLFG 
Sbjct: 419 LNTSGMLVDEPEDGRSAPTWCGFPCVLAPQFG-QGTNQPIVIPTDGRKCDTKKTCRLFGI 477

Query: 305 DLKSSSL 325
           DLKSSS+
Sbjct: 478 DLKSSSI 484


>ref|XP_006352241.1| PREDICTED: auxin response factor 9-like isoform X2 [Solanum
           tuberosum]
          Length = 683

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/95 (42%), Positives = 54/95 (56%)
 Frame = +2

Query: 59  STASPAWNLTHDQISRKSPLCVNASSNMIVEEMEESKSASAWSIISNHSGPGSGKQSNNS 238
           ST +  + +  D I   S   V+AS NM+++E E SKSAS      + +    GKQ N+ 
Sbjct: 427 STTNSTFKVHEDGIWSASK--VSASLNMLLDETEGSKSASPRPAFPSFASSQFGKQ-NDL 483

Query: 239 PASCPNDGRKSDTVVSCRLFGFDLKSSSLVALCEN 343
              C +D RK DT+ SCRLFG DLKS S  ++ EN
Sbjct: 484 LLPCLDDERKRDTITSCRLFGIDLKSPSFGSVNEN 518


>ref|XP_006352240.1| PREDICTED: auxin response factor 9-like isoform X1 [Solanum
           tuberosum]
          Length = 685

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/95 (42%), Positives = 54/95 (56%)
 Frame = +2

Query: 59  STASPAWNLTHDQISRKSPLCVNASSNMIVEEMEESKSASAWSIISNHSGPGSGKQSNNS 238
           ST +  + +  D I   S   V+AS NM+++E E SKSAS      + +    GKQ N+ 
Sbjct: 429 STTNSTFKVHEDGIWSASK--VSASLNMLLDETEGSKSASPRPAFPSFASSQFGKQ-NDL 485

Query: 239 PASCPNDGRKSDTVVSCRLFGFDLKSSSLVALCEN 343
              C +D RK DT+ SCRLFG DLKS S  ++ EN
Sbjct: 486 LLPCLDDERKRDTITSCRLFGIDLKSPSFGSVNEN 520


>ref|XP_006476352.1| PREDICTED: auxin response factor 9-like isoform X3 [Citrus
           sinensis]
          Length = 688

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = +2

Query: 122 VNASSNMIVEEMEESKSASAWSIISNHSGPGSGKQSNNSPASCPNDGRKSDTVVSCRLFG 301
           VN S  +  E M+++K+ SAW   S HS P S K +N++       GRK++T  SCRLFG
Sbjct: 450 VNFSQQLFQEAMDDNKNISAWPAHSGHSTPHSSKPNNDTLLEQVETGRKTETGTSCRLFG 509

Query: 302 FDL 310
            +L
Sbjct: 510 IEL 512


>ref|XP_006476351.1| PREDICTED: auxin response factor 9-like isoform X2 [Citrus
           sinensis]
          Length = 690

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = +2

Query: 122 VNASSNMIVEEMEESKSASAWSIISNHSGPGSGKQSNNSPASCPNDGRKSDTVVSCRLFG 301
           VN S  +  E M+++K+ SAW   S HS P S K +N++       GRK++T  SCRLFG
Sbjct: 446 VNFSQQLFQEAMDDNKNISAWPAHSGHSTPHSSKPNNDTLLEQVETGRKTETGTSCRLFG 505

Query: 302 FDL 310
            +L
Sbjct: 506 IEL 508


>ref|XP_006476350.1| PREDICTED: auxin response factor 9-like isoform X1 [Citrus
           sinensis]
          Length = 694

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = +2

Query: 122 VNASSNMIVEEMEESKSASAWSIISNHSGPGSGKQSNNSPASCPNDGRKSDTVVSCRLFG 301
           VN S  +  E M+++K+ SAW   S HS P S K +N++       GRK++T  SCRLFG
Sbjct: 450 VNFSQQLFQEAMDDNKNISAWPAHSGHSTPHSSKPNNDTLLEQVETGRKTETGTSCRLFG 509

Query: 302 FDL 310
            +L
Sbjct: 510 IEL 512


Top