BLASTX nr result
ID: Rehmannia22_contig00015653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00015653
(1294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 280 9e-73
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 276 1e-71
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 275 2e-71
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 269 2e-69
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 269 2e-69
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 266 1e-68
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 263 9e-68
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 263 1e-67
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 262 2e-67
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 262 3e-67
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 261 3e-67
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 258 5e-66
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 255 2e-65
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 254 4e-65
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 253 9e-65
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 252 3e-64
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 252 3e-64
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put... 249 2e-63
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 248 5e-63
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 248 5e-63
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform 1 [Solanum lycopersicum]
gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like isoform 2 [Solanum
lycopersicum]
Length = 237
Score = 280 bits (716), Expect = 9e-73
Identities = 139/241 (57%), Positives = 185/241 (76%), Gaps = 1/241 (0%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 403
MSRS + ++LKRKRP++ GLVDAE +LN++KSK++ G+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDK 59
Query: 404 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 583
+ SL+ K LIK+V +IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 584 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 763
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSI 178
Query: 764 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGID 940
PIG CYR+A GV GP+ +G A+IPCGACPRIS+CT DG+IS TCVY+TKWL I+
Sbjct: 179 PIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDIE 236
Query: 941 F 943
F
Sbjct: 237 F 237
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum tuberosum]
Length = 237
Score = 276 bits (707), Expect = 1e-71
Identities = 138/241 (57%), Positives = 183/241 (75%), Gaps = 1/241 (0%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 403
MSRS + +++KRKR ++ GLVDAE +LN++KSK++LG+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVDK 59
Query: 404 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 583
+ SL+ K LIK+V IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 584 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 763
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSI 178
Query: 764 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGID 940
PIG CYR+A G GP+ +G A+IPCGACPRIS+CT DG+IS TCVYYTKWL I+
Sbjct: 179 PIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNIE 236
Query: 941 F 943
F
Sbjct: 237 F 237
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 275 bits (704), Expect = 2e-71
Identities = 144/272 (52%), Positives = 181/272 (66%), Gaps = 3/272 (1%)
Frame = +2
Query: 125 AKSVFPPAQRENHRTHAILSGEFFRPFAVEIEGMSRSLVSPSSLKRKRPETQLPG--LVD 298
++S+ PP HR + E GMSRS SSLKRKRP+T L+D
Sbjct: 39 SQSIHPPYSLHPHRNPPLFLSE----------GMSRS--QGSSLKRKRPDTNTASQPLLD 86
Query: 299 AEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTY 478
AE + +LI+SK D+GIWTR++K ET L DNVVTKS+K+L K LIKEVVNIQ+K +K Y
Sbjct: 87 AERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLIKEVVNIQSKGRKHY 146
Query: 479 MAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVT 658
MAVEFEPSKE++GG WY G LD + I LK C R + KVAT EG+ I K G+
Sbjct: 147 MAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTGLCA 206
Query: 659 FDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCYRVAGGAGV-AKGPRMGAF 835
+ S+QQI EIL ++VLDN+I+EV+S+G G++ SIPIG CYR G+ GP +GA
Sbjct: 207 TECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPTIGAM 266
Query: 836 ATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 267 ASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 298
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 269 bits (688), Expect = 2e-69
Identities = 137/239 (57%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 397
MSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 398 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 577
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 118
Query: 578 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 757
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 758 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 269 bits (687), Expect = 2e-69
Identities = 137/239 (57%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 397
MSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 398 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 577
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 578 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 757
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 758 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 266 bits (680), Expect = 1e-68
Identities = 139/258 (53%), Positives = 175/258 (67%), Gaps = 2/258 (0%)
Frame = +2
Query: 164 RTHAILSGEFFRPFAVEIEGMSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKR 337
R A +G FR F V GMSR + PSSLKRKRPE P L + E + ++I+SK+
Sbjct: 34 RVPAYCTGCLFR-FDVLSVGMSR-VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQ 91
Query: 338 DLGIWTREIKLETKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISG 517
D+GIWTR++K E KL DNVV KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISG
Sbjct: 92 DIGIWTRDMKKEAKLPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISG 151
Query: 518 GEWYNNGELDKQLIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILN 697
G WY G LD + I++L+ +C R + + VATLE V + I D++ QQI EIL
Sbjct: 152 GAWYLEGSLDTEFIESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILR 211
Query: 698 SMVLDNDIIEVKSTGLGDYYSIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLC 877
+++LDN I+EVKS G+G++ SIP GK CYR + P+ GA A+IPCG CPRIS C
Sbjct: 212 TLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHC 271
Query: 878 TSDGVISQSTCVYYTKWL 931
T DG+IS TCVYY KWL
Sbjct: 272 TPDGIISPKTCVYYQKWL 289
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 263 bits (673), Expect = 9e-68
Identities = 130/229 (56%), Positives = 166/229 (72%), Gaps = 2/229 (0%)
Frame = +2
Query: 251 SLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLA 424
+LKRK+PE+ P L + E + N+I SK+D+GIWTR++K ET L DNVV KS+K L A
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 425 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 604
K LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD + I LK VC + + K
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 605 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 784
VATLEG+ + IK++G+ +++ QQI EI+ ++VLDN +IEVKS G+ ++ IPIGK CY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 785 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
+ G A PR+GA A+IPCG CPRIS CT DG+IS TCVYY+KWL
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWL 234
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 263 bits (672), Expect = 1e-67
Identities = 133/239 (55%), Positives = 169/239 (70%), Gaps = 3/239 (1%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 397
MSRS SLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 398 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 577
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 578 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 757
C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 758 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+IS +C YY KWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWL 237
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 262 bits (670), Expect = 2e-67
Identities = 132/238 (55%), Positives = 167/238 (70%), Gaps = 2/238 (0%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 397
MSR L PSSLKRKRPE P L + E + ++I+SK+D+GIWTR++K E KL DNVV
Sbjct: 1 MSR-LQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVV 59
Query: 398 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 577
KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISGG WY G LD + I++LK +
Sbjct: 60 NKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQL 119
Query: 578 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 757
C R + + VATLE V + I D++ QQI EIL +++LDN I+EVKS G+G++
Sbjct: 120 CKRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFA 179
Query: 758 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
SIP G+ CY+ G+ P+ GA A+IPCG CPRIS CT DG+IS TCVYY KWL
Sbjct: 180 SIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWL 237
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 239
Score = 262 bits (669), Expect = 3e-67
Identities = 129/234 (55%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Frame = +2
Query: 236 LVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSV 409
L SSLKRKR + L L D E + NLI SK+D+GIWT ++K ET L D++V KS+
Sbjct: 4 LQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 410 KSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRY 589
K L +K LIKEVVNIQNK +K YMA EFEPSKEI+GG WYN G LD I+ +K VC +Y
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKY 123
Query: 590 MRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPI 769
+ QKVAT +GV +K+GV ++++QQI EIL ++VLD++I+EVKSTG GD+ S+P+
Sbjct: 124 IFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPV 183
Query: 770 GKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
G+ CYR G + GA A+IPCG CPRI+ CT DG+IS TCVYY KWL
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 261 bits (668), Expect = 3e-67
Identities = 124/231 (53%), Positives = 168/231 (72%), Gaps = 2/231 (0%)
Frame = +2
Query: 245 PSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSL 418
PS+LKRK+P++ P L + E + ++I+SK+D+GIWTR++K E L DN+V KS+KSL
Sbjct: 4 PSALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSL 63
Query: 419 LAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRM 598
AK LIKEVVN+Q+K +K YMA EFEPSKE++GG+WY+NG LDK I +K + +
Sbjct: 64 QAKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQ 123
Query: 599 QKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKT 778
KVATLEG+ +E+KK+G+ + QQI EIL +VLD + EVKSTG+G++ S P+GK
Sbjct: 124 LKVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKV 183
Query: 779 CYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
CY+ G + P++GA A+IPCG CPRIS CT DG+IS TCVY+TKWL
Sbjct: 184 CYKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWL 234
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 258 bits (658), Expect = 5e-66
Identities = 128/234 (54%), Positives = 165/234 (70%), Gaps = 2/234 (0%)
Frame = +2
Query: 236 LVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSV 409
L SSLKRKR + L + D E + NLI SK+D+GIWT ++K ET L D++V KS+
Sbjct: 4 LQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 410 KSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRY 589
K L +K LIKEVVNIQNK +K YMA EFEPSKEI+GG+WY G LD I+ +K VC +
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKC 123
Query: 590 MRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPI 769
+ QKVAT +GV +K+GV T ++++QQI EIL ++VLD++I EVKSTGLGD+ S+P+
Sbjct: 124 IFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPV 183
Query: 770 GKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
G+ CYR G + GA A+IPCG CPRI+ CT DG+IS TCVYY KWL
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWL 237
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 255 bits (652), Expect = 2e-65
Identities = 132/243 (54%), Positives = 170/243 (69%), Gaps = 3/243 (1%)
Frame = +2
Query: 200 PFAVEIEGMSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLE 373
P + I GMSRS SLKRKRP+T L+DAE + +LI+SK D+GIWTR++K E
Sbjct: 83 PQVILILGMSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRE 140
Query: 374 TKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQ 553
T L DNVVTKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD +
Sbjct: 141 TNLPDNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTE 200
Query: 554 LIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVK 733
I LK C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+
Sbjct: 201 YIKILKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVR 260
Query: 734 STGLGDYYSIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTC 910
S+G G++ SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+IS +
Sbjct: 261 SSGSGEFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSS 320
Query: 911 VYY 919
V+Y
Sbjct: 321 VHY 323
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 254 bits (650), Expect = 4e-65
Identities = 125/229 (54%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
Frame = +2
Query: 257 KRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETK--LADNVVTKSVKSLLA 424
KRKRPE+ P L D E I ++I+SK+D+GIWTR++K E + L DN+VTKS+KSL
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 425 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 604
K LIKEVVNI +K KK MAVEFEPSKEISGG WY+ G LD + I +K C + + K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 605 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 784
VATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 785 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
+ G P+ G+ A+IPCG CP+I++CT DGVIS TCVYYT WL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWL 231
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 253 bits (647), Expect = 9e-65
Identities = 124/229 (54%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
Frame = +2
Query: 257 KRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETK--LADNVVTKSVKSLLA 424
KRKRP++ P L D E I ++I+SK+D+GIWTR++K E + L DN+VTKS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 425 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 604
K LIKEVVNI +K KK MAVEFEPSKEISGG WY+ G LD + I +K C + + K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 605 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 784
VATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 785 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
+ G P+ G+ A+IPCG CP+I++C DGVIS TCVYYTKWL
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWL 231
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 252 bits (643), Expect = 3e-64
Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 5/230 (2%)
Frame = +2
Query: 257 KRKRPETQLPG--LVDAEHAILNLIKS-KRDLGIWTREIKLETK--LADNVVTKSVKSLL 421
KRKRP++ P L D E I ++I+S K+D+GIWTR++K E K L DN+VTKS+KSL
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 422 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 601
K LIKEVVNI NK KK MAVEFEPSKEISGG WY+ G LD + I +K C + +
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 602 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 781
KVATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 782 YRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
Y+ G P+ G+ A++PCG CP+I+ CT DGVIS TCVYYTKWL
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 232
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 252 bits (643), Expect = 3e-64
Identities = 126/230 (54%), Positives = 163/230 (70%), Gaps = 5/230 (2%)
Frame = +2
Query: 257 KRKRPETQLPG--LVDAEHAILNLIKS-KRDLGIWTREIKLETK--LADNVVTKSVKSLL 421
KRKRP++ P L D E I ++I+S K+D+GIWTR++K E K L DN+VTKS+KSL
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 422 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 601
K LIKEVVNI NK KK MAVEFEPSKEISGG WY+ G LD + I +K C + +
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 602 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 781
KVATLEG+ + IK++G D++ QQI EI+ ++VLDN I+EVKS G G++ +IP+GK C
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200
Query: 782 YRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
Y+ G P+ G+ A++PCG CP+I+ CT DGVIS TCVYYTKWL
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWL 250
>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 249 bits (636), Expect = 2e-63
Identities = 123/236 (52%), Positives = 167/236 (70%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 403
MSR L P++LKRKRP L + E + ++I+ K+D+GI R++K E L DN+VTK
Sbjct: 1 MSR-LQGPNALKRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTK 59
Query: 404 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 583
+KSLLAK LIKEV NIQN+ +K +++ EFEPS EI+GG WY G LD + I+ LK C+
Sbjct: 60 CLKSLLAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCW 119
Query: 584 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 763
R + KVATLEGV + IK++ V ++S QQI EI+ ++VLDN+++EVKS+G G++ SI
Sbjct: 120 RKIYGLKVATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASI 179
Query: 764 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
P+GK CY+ G G P++G A+IPCG CP+IS CT DG+IS TCVYY KWL
Sbjct: 180 PVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWL 235
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 248 bits (632), Expect = 5e-63
Identities = 119/238 (50%), Positives = 176/238 (73%), Gaps = 2/238 (0%)
Frame = +2
Query: 224 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 397
MSR L PSSLKRK+P+++ P L + E I N+I+SK+D+GIW +++K K+ DNV
Sbjct: 1 MSR-LQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVA 59
Query: 398 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 577
K++KSL K LIKEVVNIQ + KK Y+A EFEP+ EI+GG WY+NG++D +I+ LK
Sbjct: 60 NKALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQ 119
Query: 578 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 757
C +++ Q+VATLEG+ + I+K+G+ ++++ QI E++ ++VLDN+++EVKS G+G++
Sbjct: 120 CLKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFD 179
Query: 758 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
SIP+GK CY+ + G P++GA ++IPCG CPRIS CT DG+IS TC YY++WL
Sbjct: 180 SIPVGKVCYK-STSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWL 236
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 248 bits (632), Expect = 5e-63
Identities = 125/227 (55%), Positives = 159/227 (70%), Gaps = 2/227 (0%)
Frame = +2
Query: 257 KRKRPETQ--LPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLAKG 430
KRK+PE+ L + E A+ N I+SK+D+GIWTR++K ET L D VV KS+K L AK
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 431 LIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQKVA 610
LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD I LK C + + KVA
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 611 TLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCYRV 790
T+E V + I + GV T ++ QQI EIL ++VLDN + EVKS G+G++ SIP+GK CY+
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYK- 186
Query: 791 AGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 931
+ G G + P++GA A+IPCG CPRI CT +G+IS TCVYY KWL
Sbjct: 187 SIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWL 233