BLASTX nr result
ID: Rehmannia22_contig00015505
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00015505
(935 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004516101.1| PREDICTED: cleavage and polyadenylation spec... 203 9e-50
gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus pe... 199 1e-48
gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus no... 197 5e-48
gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus... 196 1e-47
ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation spec... 192 2e-46
ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation spec... 192 2e-46
ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation spec... 191 3e-46
ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu... 191 4e-46
ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family pr... 190 6e-46
ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation spec... 188 3e-45
ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251... 182 2e-43
gb|ESW18631.1| hypothetical protein PHAVU_006G057000g [Phaseolus... 181 4e-43
gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma c... 181 4e-43
ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation spec... 178 3e-42
ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251... 177 5e-42
ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300... 171 5e-40
ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutr... 168 3e-39
ref|NP_200378.1| RNA recognition motif-containing protein [Arabi... 162 1e-37
ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arab... 162 1e-37
dbj|BAE99617.1| hypothetical protein [Arabidopsis thaliana] 162 1e-37
>ref|XP_004516101.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Cicer arietinum]
gi|502177700|ref|XP_004516102.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Cicer arietinum]
Length = 670
Score = 203 bits (516), Expect = 9e-50
Identities = 105/195 (53%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
W DPNMGGWGG+EHGG +A ESSYGEEAASDH GE SQ+R WPNA +EKDRGSERDWS
Sbjct: 476 WPDPNMGGWGGEEHGGGKAAESSYGEEAASDHQYGEESQDRAGWPNAMREKDRGSERDWS 535
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDV--GXXXXXXXXXXXXXXX 422
GSS+RR+KDDR GYERD PREKD G D +WSERR+RDD++V G
Sbjct: 536 GSSERRFKDDRDQGYERDVPREKDAGHDQEWSERRSRDDREVGRGRSRDRDRARSRDQDR 595
Query: 423 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXX 602
EAE+DDE +RGRSSRTH K
Sbjct: 596 DRERDRDRDRDRHREDRDKYADHHRYKDREAEHDDERERGRSSRTHSKSRLASHEEEHHS 655
Query: 603 XXDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 656 RKDADYGKRRRLTSE 670
>gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus persica]
Length = 717
Score = 199 bits (506), Expect = 1e-48
Identities = 107/198 (54%), Positives = 115/198 (58%), Gaps = 6/198 (3%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGP-WPNAFKEKDRGSERDW 245
WSDPNMGGW G+EHGG RAGESSYGEEAASDH GE S +RG WPNA KEKDRGSERDW
Sbjct: 520 WSDPNMGGWAGEEHGGGRAGESSYGEEAASDHQYGEVSHDRGGGWPNATKEKDRGSERDW 579
Query: 246 SGSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXX 413
SGSSDRRY+DDR GY+RD PREKDV D DWSERR RDD D
Sbjct: 580 SGSSDRRYRDDRDQGYDRDVPREKDVAHDHDWSERRYRDDGDASRERDRERDRGRERSRD 639
Query: 414 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXX 593
E E++DEW+RGRSSRTH K
Sbjct: 640 RDRDRDRERERDRDRYREDRDKYTDHHKYRDREPEHEDEWERGRSSRTHSKARVSQEDNR 699
Query: 594 XXXXXDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 700 RSRSRDADYGKRRRLTSE 717
>gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus notabilis]
Length = 687
Score = 197 bits (501), Expect = 5e-48
Identities = 105/194 (54%), Positives = 119/194 (61%), Gaps = 2/194 (1%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDP+MGGWGG+EHGG RAGESSYGEEAASDH GE S +RG WPNA KEKDRGSERDWS
Sbjct: 496 WSDPSMGGWGGEEHGGGRAGESSYGEEAASDHQYGEVSHDRGGWPNAMKEKDRGSERDWS 555
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXX 425
GSSDRRY+DDR ++RD PREKD G + +W ERR+RDD++VG
Sbjct: 556 GSSDRRYRDDRDQAFDRDMPREKDTGHE-EWPERRHRDDREVGRERDRERDRERERSRDR 614
Query: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXX 605
EAE+DDEW+RGRSSRTH K
Sbjct: 615 ERDRDRDRDRHRGEDRDRYADHHRYRDREAEHDDEWERGRSSRTH-KGRVSQEDDHRSRS 673
Query: 606 XDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 674 RDADYGKRRRLTSE 687
>gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
Length = 691
Score = 196 bits (498), Expect = 1e-47
Identities = 103/193 (53%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGG+E GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWS
Sbjct: 506 WSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWS 563
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXX 428
GSS+RRY+DDR GYERDAPREK++G D +WSERR+RDD++
Sbjct: 564 GSSERRYRDDRDQGYERDAPREKEMGHDPEWSERRHRDDRET-----VRERSRDRERSRD 618
Query: 429 XXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXX 608
EAE+DDEWDRGRSSRTH K
Sbjct: 619 RERDHRERDRHREDRDRYADHHRYRDREAEHDDEWDRGRSSRTHSKPRISQEEEHHSRPR 678
Query: 609 DADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 679 DADYGKRRRLTSE 691
>ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 659
Score = 192 bits (488), Expect = 2e-46
Identities = 100/194 (51%), Positives = 117/194 (60%), Gaps = 2/194 (1%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGG+E GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWS
Sbjct: 468 WSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWS 525
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXX 425
G+S+RRY+DDR GYERDAP+E+D+G D +WSERR+RDD++ G
Sbjct: 526 GTSERRYRDDRDQGYERDAPKEEDMGHDHEWSERRHRDDRETGRERSRDRDRERSRDRDR 585
Query: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXX 605
EAE+DDEW+RGRSSR H K
Sbjct: 586 DRERDHRERDRHREDRDKYADHHRYRDREAEHDDEWERGRSSRMHSKSRLSQEEEHHSRP 645
Query: 606 XDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 646 RDADYGKRRRLTSE 659
>ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 696
Score = 192 bits (488), Expect = 2e-46
Identities = 102/194 (52%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGG+E GG +AGESSYGEEAASD GE S +R WP +EKDRGSERDWS
Sbjct: 505 WSDPNMGGWGGEEPGGGKAGESSYGEEAASDQQYGEVSHDRAGWP--MREKDRGSERDWS 562
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXX 425
GSS+RRY+DDR GYERDA REKD+G D +WSERR+RDD++ G
Sbjct: 563 GSSERRYRDDRDQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSRDRDRDR 622
Query: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXX 605
EAE+DDEW+RGRSSRTH K
Sbjct: 623 DREKDLRERDRHREDRDGYADHHRFRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRP 682
Query: 606 XDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 683 RDADYGKRRRLTSE 696
>ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 693
Score = 191 bits (486), Expect = 3e-46
Identities = 99/194 (51%), Positives = 117/194 (60%), Gaps = 2/194 (1%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGG+E GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWS
Sbjct: 502 WSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWS 559
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG-XXXXXXXXXXXXXXXX 425
G+S+RRY+DDR GY+RDAP+EKD+G D +WSERR+RDD++ G
Sbjct: 560 GTSERRYRDDRDQGYDRDAPKEKDMGHDHEWSERRHRDDRETGRERSRDRDRERSRDRDR 619
Query: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXX 605
EAE+DDEW+RGRSS+ H K
Sbjct: 620 DRERDYRERDRHKEDRDRYADHHRYRDREAEHDDEWERGRSSKPHSKSQLSQEEEHHSRP 679
Query: 606 XDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 680 RDADYGKRRRLTSE 693
>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
gi|223537989|gb|EEF39602.1| RNA-binding protein, putative
[Ricinus communis]
Length = 702
Score = 191 bits (484), Expect = 4e-46
Identities = 104/200 (52%), Positives = 117/200 (58%), Gaps = 8/200 (4%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDP+MGGWG ++HGG RAGESSYGEEAASDH GE S +RG W N KEKDR SERDWS
Sbjct: 506 WSDPSMGGWGVEDHGGGRAGESSYGEEAASDHQYGEVSHDRGGWQNTMKEKDRASERDWS 565
Query: 249 GSSDRRYKDDRGAGYERDAPREKDV-GRDSDWSERRNRDDKDVG------XXXXXXXXXX 407
GSSDRRY+DDR AGY+RD PREKD+ G D DW ERR+R+D+DVG
Sbjct: 566 GSSDRRYRDDREAGYDRDMPREKDMGGHDHDWPERRHREDRDVGRERDRERERDRERSRD 625
Query: 408 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXX 587
E E+DD+WDRGRSSRTH K
Sbjct: 626 RERERERDRDRDRDHDRYREDRDRYADNHRYRDREVEHDDDWDRGRSSRTHTK---SRLS 682
Query: 588 XXXXXXXDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 683 QERSRSRDADYGKRRRLTSE 702
>ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS54-like
[Cicer arietinum]
Length = 710
Score = 190 bits (483), Expect = 6e-46
Identities = 100/197 (50%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
W DPNMGGWGG+E GG RAGESSYGEEAASD GE S +R W NA ++KDRGSERDWS
Sbjct: 514 WPDPNMGGWGGEEPGGGRAGESSYGEEAASDQQYGEVSHDRPGWQNAMRDKDRGSERDWS 573
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDV----GXXXXXXXXXXXXX 416
GSS+RRY+DDR GYERDAPR+KD G D ++SER++RDD++V
Sbjct: 574 GSSERRYRDDRDQGYERDAPRDKDAGHDPEYSERKHRDDREVVRERSRDRDRDREKSRDR 633
Query: 417 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXX 596
EAE+DDEW+RGRSSRTH K
Sbjct: 634 DRERERDRDRERDRYREDRDRYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQDEEHH 693
Query: 597 XXXXDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 694 SRSKDADYGKRRRLTSE 710
>ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Glycine max]
gi|571543924|ref|XP_006602132.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Glycine max] gi|571543928|ref|XP_006602133.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit CG7185-like isoform X3 [Glycine max]
Length = 698
Score = 188 bits (477), Expect = 3e-45
Identities = 101/196 (51%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGG+E GG +AGESSYGEEAASD GE S +R WP +EKDRGSERDWS
Sbjct: 505 WSDPNMGGWGGEEPGGGKAGESSYGEEAASDQQYGEVSHDRAGWP--MREKDRGSERDWS 562
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG---XXXXXXXXXXXXXX 419
GSS+RRY+DDR GYERDA REKD+G D +WSERR+RDD++ G
Sbjct: 563 GSSERRYRDDRDQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRDRDRERSRDR 622
Query: 420 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXX 599
EAE+DDEW+RGRSSRTH K
Sbjct: 623 DRDREKDHRERDRHREDRERYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHS 682
Query: 600 XXXDADYGKRRRLTSD 647
DADY KRRRLTS+
Sbjct: 683 RPRDADYVKRRRLTSE 698
>ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251491 [Solanum
lycopersicum]
Length = 697
Score = 182 bits (462), Expect = 2e-43
Identities = 93/192 (48%), Positives = 107/192 (55%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
WS+PN GGW GDEHGGRAGESSY EEA SDH GE + +RG WPN KEKDRGSERDWSG
Sbjct: 507 WSEPNAGGWAGDEHGGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSG 566
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXX 431
S+DR++++ R Y+RD REKD G D DW E+R RDD+DV
Sbjct: 567 STDRKHREGREPSYDRDMAREKDRGHDQDWPEKRYRDDRDVARDRERDRDHERPRERGRD 626
Query: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXXD 611
E EYDDE DRGRSSR H K D
Sbjct: 627 RERDRDRDRHRDDRDRYADHHRYKDREQEYDDE-DRGRSSRGHSKSRLSHEEDHRSRSRD 685
Query: 612 ADYGKRRRLTSD 647
ADYGKR+R+TS+
Sbjct: 686 ADYGKRQRITSE 697
>gb|ESW18631.1| hypothetical protein PHAVU_006G057000g [Phaseolus vulgaris]
Length = 687
Score = 181 bits (459), Expect = 4e-43
Identities = 102/205 (49%), Positives = 117/205 (57%), Gaps = 13/205 (6%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGG+E GG +AGESSYGEEAASDH GE S +R WP +EKDRGSERDWS
Sbjct: 488 WSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWP--MREKDRGSERDWS 545
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSER-----------RNRD-DKDVGXXXXX 392
GSS+RRY+DDR GYERDAPREK++G D +WSER R+RD D++
Sbjct: 546 GSSERRYRDDRDQGYERDAPREKEMGHDPEWSERRHRDDRETVRERSRDRDRE---RSRD 602
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXX 572
EAE+DDEW+RGRSSRTH K
Sbjct: 603 RDRERSRDRDRDRERDHRERDRHREDRDRYADHHRYRDGEAEHDDEWERGRSSRTHSKSR 662
Query: 573 XXXXXXXXXXXXDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 663 LSQEEEHHSRPRDADYGKRRRLTSE 687
>gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508720133|gb|EOY12030.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508720134|gb|EOY12031.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 709
Score = 181 bits (459), Expect = 4e-43
Identities = 97/196 (49%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWS 248
WSDPNMGGWGGDEHGG RAGESSYGEEAASDH GE S +RG W N KEKDR SERDWS
Sbjct: 514 WSDPNMGGWGGDEHGGGRAGESSYGEEAASDHQYGEVSHDRGGWQNPTKEKDRASERDWS 573
Query: 249 GSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXX 428
GSS+RRY+DDR GY++D PREKD+G + DW ERR RDD+D+
Sbjct: 574 GSSERRYRDDREPGYDKDMPREKDMGLEHDWPERRQRDDRDIVRERDRERDRDRERSRDH 633
Query: 429 XXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYD---DEWDRGRSSRTHGKXXXXXXXXXXX 599
D + D GRSSRTH +
Sbjct: 634 VRDRDRERDRDRDKDRYREDRDRYADHHRYRDRDPEHDDHGRSSRTHNRSRLSQEEEHRS 693
Query: 600 XXXDADYGKRRRLTSD 647
DADYGKRRRLTS+
Sbjct: 694 RSRDADYGKRRRLTSE 709
>ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform X1 [Solanum tuberosum]
gi|565358644|ref|XP_006346136.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like isoform
X2 [Solanum tuberosum] gi|565358646|ref|XP_006346137.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like isoform X3 [Solanum tuberosum]
Length = 695
Score = 178 bits (451), Expect = 3e-42
Identities = 93/192 (48%), Positives = 107/192 (55%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
WS+PN GGW GDEHGGRAGESSY EEA SDH GE + +RG WPN KEKDRGSERDWSG
Sbjct: 507 WSEPNAGGWAGDEHGGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSG 566
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXX 431
S++R++++ R Y+RD REKD G D DW E+R RDD+DV
Sbjct: 567 STERKHREGREPSYDRDMAREKDRGHDQDWPEKRYRDDRDVA--RDREKDRDHERSRERG 624
Query: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXXD 611
E EYDDE DRGRSSR H K D
Sbjct: 625 RDRERDRDRHRDDRDRYADHHRYKDREQEYDDE-DRGRSSRGHSKSRLSHEEDHRSRSRD 683
Query: 612 ADYGKRRRLTSD 647
ADYGKRRR+TS+
Sbjct: 684 ADYGKRRRITSE 695
>ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251795 [Solanum
lycopersicum]
Length = 695
Score = 177 bits (449), Expect = 5e-42
Identities = 93/192 (48%), Positives = 106/192 (55%)
Frame = +3
Query: 72 WSDPNMGGWGGDEHGGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
WS+PN GGW GDEHGGRAGESSY EEA SDH GE + +RG WPN KEKDRGSERDWSG
Sbjct: 507 WSEPNAGGWAGDEHGGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSG 566
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXXXX 431
S+DR++++ R Y+RD REKD G D DW E+R RDD+DV
Sbjct: 567 STDRKHREGREPSYDRDMAREKDRGHDQDWPEKRYRDDRDVA--RDRERDRDHERPRERG 624
Query: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXXXD 611
E EYDDE DRGRSSR H K D
Sbjct: 625 RDRERDRDRHRDDRDRYADHHRYKDREQEYDDE-DRGRSSRGHSKSRLSHEEDHRSRSRD 683
Query: 612 ADYGKRRRLTSD 647
ADYGKRRR+ S+
Sbjct: 684 ADYGKRRRIMSE 695
>ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300984 [Fragaria vesca
subsp. vesca]
Length = 672
Score = 171 bits (432), Expect = 5e-40
Identities = 95/201 (47%), Positives = 110/201 (54%), Gaps = 9/201 (4%)
Frame = +3
Query: 72 WSDPNMGG-WGGDEHGG-RAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDW 245
W DP+MGG W G+EHGG RAGESSYGEEA SDH GE S +RG W N KEKDRGSERDW
Sbjct: 474 WPDPSMGGGWPGEEHGGGRAGESSYGEEAGSDHQYGEASHDRGGWQNTMKEKDRGSERDW 533
Query: 246 SGSSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVGXXXXXXXXXXXXXXXX 425
SGSSDRRY++DR G++RD PREKDVG D +W+ERR+R+D DV
Sbjct: 534 SGSSDRRYREDRDQGFDRDMPREKDVGHDHEWTERRHRNDVDVN--RERDRERDRERDRG 591
Query: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGK-------XXXXXX 584
E + DE +RGRS+RTH K
Sbjct: 592 RERSRDHDRERYREDRERYADHHKYRDREMVHQDETERGRSTRTHSKARLPEDDDRRSRS 651
Query: 585 XXXXXXXXDADYGKRRRLTSD 647
D DYGKRRRLTS+
Sbjct: 652 RDRRSRSRDVDYGKRRRLTSE 672
>ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutrema salsugineum]
gi|557102517|gb|ESQ42880.1| hypothetical protein
EUTSA_v10012809mg [Eutrema salsugineum]
Length = 712
Score = 168 bits (425), Expect = 3e-39
Identities = 93/194 (47%), Positives = 106/194 (54%), Gaps = 4/194 (2%)
Frame = +3
Query: 78 DPNMGGWGGDEH--GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
DPN GGWGG E GGRA ESSYGEEAASDH GE + +RG PN KEKDR SER+WSG
Sbjct: 519 DPNSGGWGGGEDLGGGRAAESSYGEEAASDHQYGEVNHDRGARPNPVKEKDRASEREWSG 578
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG--XXXXXXXXXXXXXXXX 425
SSDRR ++D+ GYERD PREKDVG D ERR+RDD++ G
Sbjct: 579 SSDRRNREDKDVGYERDIPREKDVGHGYDLPERRHRDDRETGREREREHHHKERERSRDR 638
Query: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXXXX 605
E E+DDEW+RGRSSR H K
Sbjct: 639 DRERDRERDRHREERDRYGGDHRSRHRDEPEHDDEWNRGRSSRGHSKSRLSREDNHRSRS 698
Query: 606 XDADYGKRRRLTSD 647
DADYGKRRRLT++
Sbjct: 699 RDADYGKRRRLTTE 712
>ref|NP_200378.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758601|dbj|BAB09234.1| unnamed protein product
[Arabidopsis thaliana] gi|332009282|gb|AED96665.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 710
Score = 162 bits (411), Expect = 1e-37
Identities = 91/196 (46%), Positives = 104/196 (53%), Gaps = 6/196 (3%)
Frame = +3
Query: 78 DPNMGGWGGDEH--GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
DPN GGWG E GRA ESSYGEEAASDH GE + ERG PN KEK+R SER+WSG
Sbjct: 515 DPNSGGWGAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSG 574
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXX 419
SSDRR ++D+ AGYERD PREKDVG D ERR+RDD+D G
Sbjct: 575 SSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREH 634
Query: 420 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXX 599
E E+D+EW+RGRSSR H K
Sbjct: 635 VRDRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRS 694
Query: 600 XXXDADYGKRRRLTSD 647
D DYGKRRRLT++
Sbjct: 695 KSRDTDYGKRRRLTTE 710
>ref|XP_002866107.1| hypothetical protein ARALYDRAFT_495654 [Arabidopsis lyrata subsp.
lyrata] gi|297311942|gb|EFH42366.1| hypothetical protein
ARALYDRAFT_495654 [Arabidopsis lyrata subsp. lyrata]
Length = 706
Score = 162 bits (411), Expect = 1e-37
Identities = 91/196 (46%), Positives = 105/196 (53%), Gaps = 6/196 (3%)
Frame = +3
Query: 78 DPNMGGWGGDEH--GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
DPN GGWGG E GRA ESSYGEEAASDH GE + +RG PN KEK+R SER+WSG
Sbjct: 511 DPNSGGWGGGEDLGSGRAAESSYGEEAASDHQYGEVNHDRGARPNPVKEKERVSEREWSG 570
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXX 419
SSDRR ++D+ AGYERD PREKDVG D ERR+RDD+D G
Sbjct: 571 SSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREH 630
Query: 420 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXX 599
E E+D+EW+RGRSSR H K
Sbjct: 631 VRDRERDRERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHSKSRLSREDNHRS 690
Query: 600 XXXDADYGKRRRLTSD 647
D DYGKRRRLT++
Sbjct: 691 RSRDTDYGKRRRLTTE 706
>dbj|BAE99617.1| hypothetical protein [Arabidopsis thaliana]
Length = 276
Score = 162 bits (411), Expect = 1e-37
Identities = 91/196 (46%), Positives = 104/196 (53%), Gaps = 6/196 (3%)
Frame = +3
Query: 78 DPNMGGWGGDEH--GGRAGESSYGEEAASDHLDGEGSQERGPWPNAFKEKDRGSERDWSG 251
DPN GGWG E GRA ESSYGEEAASDH GE + ERG PN KEK+R SER+WSG
Sbjct: 81 DPNSGGWGAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSG 140
Query: 252 SSDRRYKDDRGAGYERDAPREKDVGRDSDWSERRNRDDKDVG----XXXXXXXXXXXXXX 419
SSDRR ++D+ AGYERD PREKDVG D ERR+RDD+D G
Sbjct: 141 SSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREH 200
Query: 420 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEYDDEWDRGRSSRTHGKXXXXXXXXXXX 599
E E+D+EW+RGRSSR H K
Sbjct: 201 VRDRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRS 260
Query: 600 XXXDADYGKRRRLTSD 647
D DYGKRRRLT++
Sbjct: 261 KSRDTDYGKRRRLTTE 276