BLASTX nr result

ID: Rehmannia22_contig00015490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00015490
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231027.1| PREDICTED: choline transporter-like protein ...    91   2e-16
ref|XP_006359678.1| PREDICTED: choline transporter-like protein ...    89   6e-16
ref|XP_002277761.1| PREDICTED: choline transporter-like protein ...    76   5e-12
ref|XP_004158379.1| PREDICTED: choline transporter-like protein ...    68   1e-09
ref|XP_004147033.1| PREDICTED: choline transporter-like protein ...    68   1e-09
gb|EXB39293.1| hypothetical protein L484_024988 [Morus notabilis]      67   2e-09
gb|EOX97706.1| Plasma-membrane choline transporter family protei...    64   2e-08
ref|XP_002305508.1| choline transporter-related family protein [...    63   3e-08
emb|CAB37520.1| putative protein [Arabidopsis thaliana] gi|72708...    62   6e-08
ref|NP_568045.1| plasma-membrane choline transporter family prot...    62   6e-08
ref|XP_002313719.1| choline transporter-related family protein [...    62   8e-08
ref|XP_004289859.1| PREDICTED: choline transporter-like protein ...    62   1e-07
ref|XP_006422626.1| hypothetical protein CICLE_v10028126mg [Citr...    61   2e-07
ref|XP_002868851.1| hypothetical protein ARALYDRAFT_327819 [Arab...    60   3e-07
gb|ESW03693.1| hypothetical protein PHAVU_011G034500g [Phaseolus...    59   5e-07
ref|XP_006283462.1| hypothetical protein CARUB_v10004506mg [Caps...    59   5e-07
ref|XP_006411654.1| hypothetical protein EUTSA_v10024826mg [Eutr...    59   7e-07

>ref|XP_004231027.1| PREDICTED: choline transporter-like protein 3-like isoform 1
           [Solanum lycopersicum]
          Length = 552

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 59/128 (46%), Positives = 74/128 (57%), Gaps = 13/128 (10%)
 Frame = -2

Query: 399 KLASTLHEPXXXXTQPLLSKPYPSLDPPIA------STSETEEDQTQYLQISYNYGTRSI 238
           KL+STL +P     QPLLSKPYP +D  I        +S   +DQTQ+LQISYN+GTR  
Sbjct: 9   KLSSTLADPTT---QPLLSKPYP-VDDSITPHQYPGQSSLDPDDQTQFLQISYNFGTRPF 64

Query: 237 KDXXXXXXXXXXXXXXXXXGIFASVNRNPHRHQVSSFIYDTTSSSCTF-------RNDFR 79
           KD                 GIFASV+RNPH  Q+SSF Y+ TSSSC+         +DF 
Sbjct: 65  KDLPFLILFVLLVLCTFGFGIFASVHRNPHHSQISSFTYNITSSSCSIGSSTSESSSDFF 124

Query: 78  TPFSSNSS 55
           + +SS+SS
Sbjct: 125 SLYSSDSS 132


>ref|XP_006359678.1| PREDICTED: choline transporter-like protein 3-like [Solanum
           tuberosum]
          Length = 552

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 58/128 (45%), Positives = 74/128 (57%), Gaps = 13/128 (10%)
 Frame = -2

Query: 399 KLASTLHEPXXXXTQPLLSKPYPSLDPPIA------STSETEEDQTQYLQISYNYGTRSI 238
           KL+STL +P     QPLLSKPYP +D  I        +S   +DQTQ+LQISYN+G R +
Sbjct: 9   KLSSTLADPTT---QPLLSKPYP-VDDSITPHHYPGQSSLDPDDQTQFLQISYNFGPRPL 64

Query: 237 KDXXXXXXXXXXXXXXXXXGIFASVNRNPHRHQVSSFIYDTTSSSCTFR-------NDFR 79
           KD                 GIFASV+RNPH  Q+SSF Y+ TSSSC+         +DF 
Sbjct: 65  KDLPFLILFVLLVLCTFGFGIFASVHRNPHHSQISSFTYNFTSSSCSLESSTFESSSDFF 124

Query: 78  TPFSSNSS 55
           + +SS+SS
Sbjct: 125 SLYSSDSS 132


>ref|XP_002277761.1| PREDICTED: choline transporter-like protein 3 [Vitis vinifera]
           gi|297744628|emb|CBI37890.3| unnamed protein product
           [Vitis vinifera]
          Length = 550

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 49/115 (42%), Positives = 58/115 (50%)
 Frame = -2

Query: 354 PLLSKPYPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXGI 175
           PLLSK YPS          +E DQTQ+LQISYNYG R  KD                 GI
Sbjct: 22  PLLSKSYPSPSISEPQPESSEPDQTQFLQISYNYGPRPFKDLPFLILFLVVVLCTFGFGI 81

Query: 174 FASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNSSEWNPFYDRLSESSIS 10
           FA VNRNP+   VSS+ YD++S+SC          S+ S +  P  D L  SS S
Sbjct: 82  FAVVNRNPNSSSVSSYSYDSSSTSCVKN-------STASLKQQPISDYLKLSSSS 129


>ref|XP_004158379.1| PREDICTED: choline transporter-like protein 1-like [Cucumis
           sativus]
          Length = 556

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
 Frame = -2

Query: 390 STLHEPXXXXTQPLLSK------PYPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDX 229
           ++L +     +QPLLS       PYPS+D P  S    E D +Q+LQISYNYG R  KD 
Sbjct: 11  TSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHSNPH-ESDPSQFLQISYNYGHRPFKDV 69

Query: 228 XXXXXXXXXXXXXXXXGIFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNSSEW 49
                           GIFAS NRN H   +S + +D+ +S+C   N      SS+S  W
Sbjct: 70  PILVLFLLFVLSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMTNS----LSSSSFIW 125

Query: 48  NPFY 37
              Y
Sbjct: 126 VSLY 129


>ref|XP_004147033.1| PREDICTED: choline transporter-like protein 1-like [Cucumis
           sativus]
          Length = 556

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
 Frame = -2

Query: 390 STLHEPXXXXTQPLLSK------PYPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDX 229
           ++L +     +QPLLS       PYPS+D P  S    E D +Q+LQISYNYG R  KD 
Sbjct: 11  TSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHSNPH-ESDPSQFLQISYNYGHRPFKDV 69

Query: 228 XXXXXXXXXXXXXXXXGIFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNSSEW 49
                           GIFAS NRN H   +S + +D+ +S+C   N      SS+S  W
Sbjct: 70  PILVLFLLFVLSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMTNS----LSSSSFIW 125

Query: 48  NPFY 37
              Y
Sbjct: 126 VSLY 129


>gb|EXB39293.1| hypothetical protein L484_024988 [Morus notabilis]
          Length = 555

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/117 (40%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
 Frame = -2

Query: 357 QPLLSKPYPSLD---------PPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXX 205
           QPLLSKP P LD         PP       E D +QYLQISYNYG R  KD         
Sbjct: 23  QPLLSKP-PHLDDSPPPPLPPPPSYYDRRRESDASQYLQISYNYGPRPFKDLPFLILFLV 81

Query: 204 XXXXXXXXGIFASVNRNPHRHQVSSFIYDTTSSSCT-FRNDFRTPFSSNSSEWNPFY 37
                   GIFA  +RN +   +SSF+YD+ S+SC   +N       S+SS W  F+
Sbjct: 82  FVLSTFGFGIFAVFHRNANYSNLSSFVYDSNSTSCVEHKNQL-----SSSSNWVFFF 133


>gb|EOX97706.1| Plasma-membrane choline transporter family protein [Theobroma
           cacao]
          Length = 559

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/108 (39%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
 Frame = -2

Query: 354 PLLSKPYPS---LDPPI---ASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXX 193
           PLLSKP  S   L PPI   A    +E D TQ+LQIS+NYG R  KD             
Sbjct: 25  PLLSKPTTSSTYLSPPIEEPAQPDPSEPDPTQFLQISFNYGPRPFKDLPFLILFVLLVVC 84

Query: 192 XXXXGIFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNSSEW 49
               GIF+  +RN +   VSSF YD+ S+SC   + F      ++S+W
Sbjct: 85  TFAFGIFSIFHRNTNYSNVSSFTYDSNSTSCVQDSSF-----LSNSDW 127


>ref|XP_002305508.1| choline transporter-related family protein [Populus trichocarpa]
           gi|222848472|gb|EEE86019.1| choline transporter-related
           family protein [Populus trichocarpa]
          Length = 548

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/98 (39%), Positives = 50/98 (51%)
 Frame = -2

Query: 357 QPLLSKPYPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           QPLL KP PS + P     + E D TQYLQISYNYG R  KD                 G
Sbjct: 21  QPLLFKP-PSTEEP-NQPDQPESDPTQYLQISYNYGPRPFKDLPFLILFVLVVLCTFGFG 78

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSS 64
           IF   ++NP+   +SS+ YD  S+SC   ++F   + S
Sbjct: 79  IFCVFHKNPNYSNLSSYKYDLNSTSCVKGSNFNGFYES 116


>emb|CAB37520.1| putative protein [Arabidopsis thaliana] gi|7270847|emb|CAB80528.1|
           putative protein [Arabidopsis thaliana]
          Length = 523

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = -2

Query: 354 PLLSKPYPS-LDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           PLLSKP  S LD P    S+ E D TQ+LQISYN+G R+ KD                 G
Sbjct: 23  PLLSKPSTSALDSP--RRSDPESDPTQFLQISYNFGPRTFKDIPFLLLFDLLVLSTFGFG 80

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDF 82
           IF+  +RN      SSF YD TSSSC   + F
Sbjct: 81  IFSIFHRNNDYGNSSSFTYDFTSSSCVKNSTF 112


>ref|NP_568045.1| plasma-membrane choline transporter family protein [Arabidopsis
           thaliana] gi|16649077|gb|AAL24390.1| putative protein
           [Arabidopsis thaliana] gi|21387167|gb|AAM47987.1|
           putative protein [Arabidopsis thaliana]
           gi|332661557|gb|AEE86957.1| plasma-membrane choline
           transporter family protein [Arabidopsis thaliana]
          Length = 556

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = -2

Query: 354 PLLSKPYPS-LDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           PLLSKP  S LD P    S+ E D TQ+LQISYN+G R+ KD                 G
Sbjct: 23  PLLSKPSTSALDSP--RRSDPESDPTQFLQISYNFGPRTFKDIPFLLLFDLLVLSTFGFG 80

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDF 82
           IF+  +RN      SSF YD TSSSC   + F
Sbjct: 81  IFSIFHRNNDYGNSSSFTYDFTSSSCVKNSTF 112


>ref|XP_002313719.1| choline transporter-related family protein [Populus trichocarpa]
           gi|222850127|gb|EEE87674.1| choline transporter-related
           family protein [Populus trichocarpa]
          Length = 548

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/115 (36%), Positives = 55/115 (47%)
 Frame = -2

Query: 357 QPLLSKPYPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           QPLL KP PS++ P     + E D TQYLQISYNYG R  KD                 G
Sbjct: 21  QPLLLKP-PSIEEP-NQPDQPESDPTQYLQISYNYGPRPFKDLPFVIFFVFVVLCTFGFG 78

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNSSEWNPFYDRLSESSI 13
           IF+  ++N +   +SS+ YD  S+SC   + F   + S       FY   S  S+
Sbjct: 79  IFSVFHKNSNYSNLSSYKYDLNSNSCARNSTFNGFYESRFD----FYALSSSGSV 129


>ref|XP_004289859.1| PREDICTED: choline transporter-like protein 3-like [Fragaria vesca
           subsp. vesca]
          Length = 544

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/96 (38%), Positives = 47/96 (48%)
 Frame = -2

Query: 354 PLLSKPYPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXGI 175
           PLLSKP     PP   + + + D TQYLQIS+N+  R  KD                 GI
Sbjct: 20  PLLSKPDDPPPPPSPYSDQPDSDPTQYLQISFNHDPRPFKDLAFLLLFLLFVLSTFAAGI 79

Query: 174 FASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFS 67
           FA V+RN     +SSF YD+ S+SC       T F+
Sbjct: 80  FAVVHRNSDYSSLSSFEYDSDSTSCVKNASSLTSFA 115


>ref|XP_006422626.1| hypothetical protein CICLE_v10028126mg [Citrus clementina]
           gi|557524560|gb|ESR35866.1| hypothetical protein
           CICLE_v10028126mg [Citrus clementina]
          Length = 554

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
 Frame = -2

Query: 381 HEPXXXXTQPLLSKPYPSLDPPI--ASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXX 208
           +E     +QPLL KP   +  P   ++ S  E D TQ+LQI+YNYG R  KD        
Sbjct: 15  YESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYGPRPFKDIPFIILFI 74

Query: 207 XXXXXXXXXGIFASVNRNPHRHQVSSFIYDTTSSSC 100
                    GIF+  N+N + +  SSFIY+ +S SC
Sbjct: 75  LFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSC 110


>ref|XP_002868851.1| hypothetical protein ARALYDRAFT_327819 [Arabidopsis lyrata subsp.
           lyrata] gi|297314687|gb|EFH45110.1| hypothetical protein
           ARALYDRAFT_327819 [Arabidopsis lyrata subsp. lyrata]
          Length = 553

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = -2

Query: 354 PLLSKPYPS-LDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           PLLSKP  S LD P    S+ E D TQ+LQISYN+G R+ KD                 G
Sbjct: 23  PLLSKPSTSALDSP--RRSDPESDPTQFLQISYNFGPRTFKDIPFLLLFDLLVLSTFGFG 80

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDF 82
           IF+  +RN      SSF YD  SSSC   + F
Sbjct: 81  IFSLFHRNSDYGSSSSFTYDFHSSSCVKNSTF 112


>gb|ESW03693.1| hypothetical protein PHAVU_011G034500g [Phaseolus vulgaris]
          Length = 548

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/101 (41%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = -2

Query: 357 QPLLSKP-YPSLDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXX 181
           QP LSKP YPS     ++  E  E   QYL I+YN G RS KD                 
Sbjct: 23  QPFLSKPSYPSSTS--SAVEEESESNQQYLHITYNSGPRSFKDLPFLILFLLFIISTFAF 80

Query: 180 GIFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNS 58
           GIFA  +RN +   +SSF YD TSSSC        P SS+S
Sbjct: 81  GIFAVFHRNTNYPSLSSFSYDPTSSSCVL-----NPSSSSS 116


>ref|XP_006283462.1| hypothetical protein CARUB_v10004506mg [Capsella rubella]
           gi|482552167|gb|EOA16360.1| hypothetical protein
           CARUB_v10004506mg [Capsella rubella]
          Length = 555

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/92 (43%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
 Frame = -2

Query: 354 PLLSKPYPS-LDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           PLLSKP  S L  P    S+ E D TQ+LQISYN+G R  KD                 G
Sbjct: 23  PLLSKPSTSALGSP--RRSDPESDPTQFLQISYNFGPRPFKDIPFLLLFDLLVLSTFGFG 80

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDF 82
           IF+  +RN      SSF YD TSSSC   + F
Sbjct: 81  IFSIFHRNIDYGSASSFTYDFTSSSCVKNSTF 112


>ref|XP_006411654.1| hypothetical protein EUTSA_v10024826mg [Eutrema salsugineum]
           gi|557112824|gb|ESQ53107.1| hypothetical protein
           EUTSA_v10024826mg [Eutrema salsugineum]
          Length = 554

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
 Frame = -2

Query: 354 PLLSKPYPS-LDPPIASTSETEEDQTQYLQISYNYGTRSIKDXXXXXXXXXXXXXXXXXG 178
           PLLSKP  S LD P     + E D TQ+LQIS+N+G R  KD                 G
Sbjct: 23  PLLSKPSTSALDSP--RPCDPESDPTQFLQISFNFGPRPFKDIPFLLLFDLFVFSTFAFG 80

Query: 177 IFASVNRNPHRHQVSSFIYDTTSSSCTFRNDFRTPFSSNSSEWNPFYDRLSES 19
           IF+  +RN      SSF YD  SSSC   + F    +S  +  +  Y  L  S
Sbjct: 81  IFSIFHRNTDYGSSSSFSYDLASSSCVKNSTFNRVSNSYGASSSVMYAMLPSS 133


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