BLASTX nr result
ID: Rehmannia22_contig00015486
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00015486
(846 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe... 137 6e-30
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 125 2e-26
ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260... 122 1e-25
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 122 2e-25
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 120 5e-25
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 120 8e-25
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 119 2e-24
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 118 2e-24
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 118 2e-24
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S... 117 5e-24
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 117 5e-24
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 117 7e-24
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 116 1e-23
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 116 1e-23
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 116 1e-23
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 116 1e-23
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 116 1e-23
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 115 2e-23
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 115 3e-23
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S... 115 3e-23
>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
Length = 1171
Score = 137 bits (344), Expect = 6e-30
Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Frame = +3
Query: 51 FCVDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAI-FVYASTDKITR 227
FC+ +GR GG+++ W+ + I + N H C + + W F+YA K +
Sbjct: 148 FCIPYVGRCGGIILMWNPAIFNISILNYHECYINCELQDITTNKSWTTTFIYAYPQKAKQ 207
Query: 228 RDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQ 407
+ WR + S K W + GDFN I + EK GG+ + + +F + + E+ +
Sbjct: 208 SNLWREIVSLKPTNNHPWLMLGDFNSICSMNEKVGGSFETSQAMRNFNKVIDDCEVVSLA 267
Query: 408 FSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSV 587
+G PFTW N + ERLDR +PDW P++ +Q++ + SDH + L N +
Sbjct: 268 ATGVPFTWCNGHHDNTIIYERLDRALANPDWMRLLPHSELQNLPIVRSDHGPIFLKCNQI 327
Query: 588 IYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSR 755
+ K F F+ WL + ++SQ WN S +G QIQ + L NW+R
Sbjct: 328 SRRIPKTFKFEAMWLAHKNFDQVVSQVWNCSYVGNAAQQIQTCCNTFKHQLKNWNR 383
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 125 bits (313), Expect = 2e-26
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 10/245 (4%)
Frame = +3
Query: 51 FCVDPIGRSGGLLVSWSSKVEV-IEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITR 227
F VD G GGL + W+S VEV I+ ++ H + G+ +++ VY + +
Sbjct: 19 FAVDRNGLGGGLALFWTSNVEVEIKSYSLHHIDALVKT--GNGKVWRCTGVYGHPETNQK 76
Query: 228 RDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQ 407
+ W L+ + W GDFN+IL ++EK GGN+++ F+E + + D+
Sbjct: 77 HNTWTLLKRLAGIFSYPWCCFGDFNEILNLQEKSGGNEKNIDMVVQFREAVQACNLVDVG 136
Query: 408 FSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDT--- 578
+ GHPFTW+N R G+ F+EERLDRF S DW+ F + ++ + SDHC +L++
Sbjct: 137 YRGHPFTWSNRRYGQHFIEERLDRFLCSNDWSENFHDMAATNLVNWVSDHCPILMEVRER 196
Query: 579 NSVIYKGKK---RFSFDKRWLQWDGIELIISQAWNTSVIG---TPLFQIQKRIANCRVAL 740
+ GKK R ++ W ++ + I+ W + G P+ Q+ N L
Sbjct: 197 SKDRSHGKKSIHREHYEDMWSSYEACKNIVRNEWASMGRGARENPVKHFQQAAKNSLANL 256
Query: 741 INWSR 755
WS+
Sbjct: 257 KIWSK 261
>ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260732 [Solanum
lycopersicum]
Length = 333
Score = 122 bits (307), Expect = 1e-25
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Frame = +3
Query: 105 KVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQWRFLESAKSKWGKM-- 278
K +V++++ F +E+ + E S E+F +VYA + RR W L W +
Sbjct: 2 KCKVVDMNQQLFTLEVTH--ENSSELFNITYVYAKCKEHLRRPLWDRL----LHWSDIEI 55
Query: 279 -WFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSGHPFTWANNREGEG 455
W + GDFN I +EK GG + + + DF E + D+ ++G PFTW N+R+ +
Sbjct: 56 PWCIIGDFNVIYSSQEKLGGREYNISKSVDFISTMEHCGLVDLGYNGQPFTWCNHRKNDA 115
Query: 456 FVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSVIYKGKKRFSFDKRWLQ 635
+ +RLDR + W K P+ + H+ SDHC LL++ K F F W +
Sbjct: 116 RIWKRLDRGLANDKWLDKMPHTIITHLSAVGSDHCPLLMEMKDRKDDVIKYFKFLNCWTE 175
Query: 636 WDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKNSNAADIINKCKKRLTEI 815
D I+ + WN V+G P++ + ++ + L NWS+ D+ K K+ +
Sbjct: 176 NDSFYQIVEKCWNEKVVGNPMWILHTKMKRLTITLRNWSK---KEYGDVFIKTKEFEEMV 232
Query: 816 KRLE 827
KR E
Sbjct: 233 KRAE 236
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 122 bits (305), Expect = 2e-25
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 4/264 (1%)
Frame = +3
Query: 45 RWFCVDPIGRSGGLLVSWSSKVEVI-EVHNTHFCIEMAYRLEGSEEIFW-AIFVYASTDK 218
R F V+ +G+ GGL + W + V+ + +N+ + L+ W A FVY
Sbjct: 35 RCFTVNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCCT---WRATFVYGEPRA 91
Query: 219 ITRRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMG 398
R W L +S G W + GDFN+ + E K KRS + DF+E ++
Sbjct: 92 QDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLH 151
Query: 399 DIQFSGHPFTWAN-NREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLD 575
DI F G P+T+ N REG V+ RLDR SP W+ +FP A + H+ SSDH LLL+
Sbjct: 152 DIGFQGAPWTFCNMQREGRN-VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLE 210
Query: 576 -TNSVIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWS 752
+ + + K +++ W + + +I +AW + L I ++ L++WS
Sbjct: 211 REETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWS 270
Query: 753 RLKNSNAADIINKCKKRLTEIKRL 824
+ K N I +++L E++ +
Sbjct: 271 KDKIGNVRKKIKDLREKLGELRNI 294
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 120 bits (302), Expect = 5e-25
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 4/264 (1%)
Frame = +3
Query: 45 RWFCVDPIGRSGGLLVSWSSKVEVI-EVHNTHFCIEMAYRLEGSEEIFW-AIFVYASTDK 218
R F V+ +G+ GGL + W + V+ + +N+ + L+ W A F+Y
Sbjct: 10 RCFTVNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCCT---WRATFLYGEPRA 66
Query: 219 ITRRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMG 398
R W L +S G W + GDFN+ + E K KRS + DF+E ++
Sbjct: 67 QDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLH 126
Query: 399 DIQFSGHPFTWAN-NREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLD 575
DI F G P+T+ N REG V+ RLDR SP W+ +FP A + H+ SSDH LLL+
Sbjct: 127 DIGFQGAPWTFCNMQREGRN-VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLE 185
Query: 576 -TNSVIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWS 752
+ + + K +++ W + + +I +AW + L I ++ L++WS
Sbjct: 186 REETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWS 245
Query: 753 RLKNSNAADIINKCKKRLTEIKRL 824
+ K N I +++L E++ +
Sbjct: 246 KDKIGNVRKKIKDLREKLGELRNI 269
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
Arabidopsis thaliana retrotransposon Ta11-1
gi|976278|gb|AAA75254.1| reverse transcriptase
[Arabidopsis thaliana]
Length = 1333
Score = 120 bits (300), Expect = 8e-25
Identities = 80/262 (30%), Positives = 129/262 (49%)
Frame = +3
Query: 45 RWFCVDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKIT 224
R F V+PIG SGGL + W V+++ + I+ + GS E F+ VY +
Sbjct: 57 RVFTVNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQIQF-GSHE-FYVSCVYGNPAFSD 114
Query: 225 RRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDI 404
+ W + + W + GDFN IL EK+GG +R +SF F + + +M ++
Sbjct: 115 KHLVWEKITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLEL 174
Query: 405 QFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNS 584
G+PFTW + E +++ RLDR FG+ +W FP + + +D SDH +L+
Sbjct: 175 PSIGNPFTWGG-KTNEMWIQSRLDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVRLTK 233
Query: 585 VIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKN 764
+ + F FDKR ++ I QAWN S L + K + +CR AL W + N
Sbjct: 234 TKEEYRGNFRFDKRLFNQPNVKETIVQAWNGSQRNENLLVLDK-LKHCRSALSRWKKENN 292
Query: 765 SNAADIINKCKKRLTEIKRLEG 830
N++ I + + L E+++ G
Sbjct: 293 INSSTRITQARAAL-ELEQSSG 313
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 119 bits (297), Expect = 2e-24
Identities = 73/225 (32%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Frame = +3
Query: 51 FCVDPIGRSGGLLVSWSSKVEV-IEVHNTHFCIEMAYRLEGSEEIFWAI---FVYASTDK 218
F VD IG SGGL + W S++ + I +TH + + + W + + Y +T+
Sbjct: 28 FVVDAIGLSGGLCLFWKSELNLAIRSSSTHHIDAEVGGI--GDSLHWRLTGFYGYPATED 85
Query: 219 ITRRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMG 398
W L S+ W GDFN++L EK+GG R F++ +
Sbjct: 86 THL--SWNLLRDLASESRLPWVCMGDFNELLYANEKEGGLIRPVRQMLAFRDAISDCHLD 143
Query: 399 DIQFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDT 578
D+ F G FTW + R G ++ERLDR + +W FP A V H++ SSDH +LL+
Sbjct: 144 DMGFEGATFTWFSTRNGG--IKERLDRVLANCEWRSLFPQATVHHLEPCSSDHLPILLEA 201
Query: 579 NSVIYKGKKR--FSFDKRWLQWDGIELIISQAWNTSVIGTPLFQI 707
+ + ++R F F+ W Q + E II+ AWNTS GT ++Q+
Sbjct: 202 SPTMKPWRRRSFFRFESMWTQHEDCESIIANAWNTSFTGTLMYQV 246
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 118 bits (296), Expect = 2e-24
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Frame = +3
Query: 51 FCVDPIGRSGGLLVSWSSKVEVIEVHNTHFCIE--MAYRLEGSEEIFWAIFVYASTDKIT 224
+ V+P+G+ GGL + W S V+V + F + M +++ F VY D+
Sbjct: 20 YTVEPVGKCGGLALLWKSSVQV----DLKFVDKNLMDAQVQFGAVNFCVSCVYGDPDRSK 75
Query: 225 RRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDI 404
R W + W + GDFNDIL EK GG +RS F E + ++ ++
Sbjct: 76 RSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEM 135
Query: 405 QFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNS 584
G+ FTWA R G+ +++ RLDR FG+ +W FP + +D SDH +L+ S
Sbjct: 136 PAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMS 194
Query: 585 VIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKN 764
+ +F FDKR+L + ++ I + W+ GT + + R+ CR +L +W + N
Sbjct: 195 SQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNN 253
Query: 765 SNAADIINKCKKRLTEIKRL 824
N+ D IN+ + L + + L
Sbjct: 254 LNSLDKINQLEAALEKEQSL 273
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 118 bits (296), Expect = 2e-24
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Frame = +3
Query: 51 FCVDPIGRSGGLLVSWSSKVEVIEVHNTHFCIE--MAYRLEGSEEIFWAIFVYASTDKIT 224
+ V+P+G+ GGL + W S V+V + F + M +++ F VY D+
Sbjct: 23 YTVEPVGKCGGLALLWKSSVQV----DLKFVDKNLMDAQVQFGAVNFCVSCVYGDPDRSK 78
Query: 225 RRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDI 404
R W + W + GDFNDIL EK GG +RS F E + ++ ++
Sbjct: 79 RSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEM 138
Query: 405 QFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNS 584
G+ FTWA R G+ +++ RLDR FG+ +W FP + +D SDH +L+ S
Sbjct: 139 PAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMS 197
Query: 585 VIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKN 764
+ +F FDKR+L + ++ I + W+ GT + + R+ CR +L +W + N
Sbjct: 198 SQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQNN 256
Query: 765 SNAADIINKCKKRLTEIKRL 824
N+ D IN+ + L + + L
Sbjct: 257 LNSLDKINQLEAALEKEQSL 276
>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
gi|241936686|gb|EES09831.1| hypothetical protein
SORBIDRAFT_05g019526 [Sorghum bicolor]
Length = 1209
Score = 117 bits (293), Expect = 5e-24
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 2/229 (0%)
Frame = +3
Query: 69 GRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQWRFL 248
GRSGGL + W++K+ V + + + I++ EGS + + VY + R W L
Sbjct: 327 GRSGGLGIFWNNKISVQLLPYSKYHIDVIIS-EGSADPWRLTCVYGEAQIVERYKTWDML 385
Query: 249 ESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSGHPFT 428
+S K W GDFN++L E G +RS+ A F+E +V + D+ + G +T
Sbjct: 386 KSIKPNSSLPWVCIGDFNEVLHRSEHLGVQERSYAQIAGFREMVDVCGLCDLGYEGRSWT 445
Query: 429 WANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSVIYKGKKR 608
+ G F RLDR +P+W+ +FP A+V+H+ +SDH ++L + + ++R
Sbjct: 446 YEKKVTGGSFCRVRLDRALATPEWSARFPLAKVRHITAAASDHGPIVLQWEAAQGRQRQR 505
Query: 609 --FSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINW 749
F ++ W + +ISQ W T ++Q ++ + L +W
Sbjct: 506 RQFRYETMWETHEDFANVISQTWQRGTKATTAHELQSKLRSVSCKLNHW 554
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 117 bits (293), Expect = 5e-24
Identities = 67/255 (26%), Positives = 116/255 (45%)
Frame = +3
Query: 57 VDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQ 236
+ P G SGGL+V W + + + + +++ + F+ +Y R
Sbjct: 421 ISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFN--FYLSCIYGHPIPSERHHL 478
Query: 237 WRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSG 416
W L+ + W + GDFN+IL + EKKGG +RS S +F M D++ G
Sbjct: 479 WEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKG 538
Query: 417 HPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSVIYK 596
+P++W R+ E +E LDR F + DW FP + + + SDH +++D +
Sbjct: 539 NPYSWVGKRQNE-TIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDIAEEVCT 597
Query: 597 GKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKNSNAA 776
+ +F +D+R Q++ + + WN + +K + CR L W R +N A
Sbjct: 598 KRGQFRYDRRHFQFEDFVDSVQRGWNRGRSDSHGGYYEK-LHCCRQELAKWKRRTKTNTA 656
Query: 777 DIINKCKKRLTEIKR 821
+ I K R+ +R
Sbjct: 657 EKIETLKYRVDAAER 671
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 117 bits (292), Expect = 7e-24
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Frame = +3
Query: 69 GRSGGLLVSWSSKVEV-IEVHNTHFCIEMAYRLEGSEEIFWAIF-VYASTDKITRRDQWR 242
G+SGGL + W + V I+ +T+ + +GS + W + Y + + +R D W
Sbjct: 388 GKSGGLALLWLGSIIVDIKSFSTNHIDAVISPQDGSPK--WRLTGFYGNPLQASRSDSWS 445
Query: 243 FLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSGHP 422
L ++ W + GDFN++L +E RS +S F+ E ++ D+ F G+P
Sbjct: 446 LLTRLHHQFSLPWLVVGDFNEVLWQDEHLSSCLRSCSSMGLFRNALEECDLSDLGFQGYP 505
Query: 423 FTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSVI---- 590
FTW NNR V+ RLDRF + W P+ V H+ SDHC +LL V+
Sbjct: 506 FTWTNNRTHPSTVKARLDRFVANTSWINIVPHFSVSHLKFGGSDHCPILLMFKDVVGCHT 565
Query: 591 -YKGKKRFSFDKRWLQWDGIELIISQAWNTSVIG-TPLFQIQKRIANCRVALINWSRLKN 764
+ K+ F F+K W + + +II W P + +R+ NCR L W R
Sbjct: 566 TLRRKRFFKFEKIWCENETCRVIIDGCWAVPRSSWCPQLSLLRRLQNCRQKLQCWHRTSI 625
Query: 765 SNAADIINKCKKRLTEI 815
+ I+ + RL+ +
Sbjct: 626 GSLRHRISSIQDRLSTL 642
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 116 bits (290), Expect = 1e-23
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 2/259 (0%)
Frame = +3
Query: 57 VDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQ 236
V+P GRSGGL + W S +E+ ++ +++ ++ ++++ VY R
Sbjct: 58 VEPEGRSGGLAIFWKSHLEIEFLYADKNLMDL--QVSSRNKVWFISCVYGLPVTHMRPKL 115
Query: 237 WRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSG 416
W L S K + W L GDFNDI +EK GG +RS +SF F+ M ++ +G
Sbjct: 116 WEHLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTG 175
Query: 417 HPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDH--CLLLLDTNSVI 590
+ FTW NR + +V+ +LDR FG+P W FPNA ++ F SDH L+ ++ +
Sbjct: 176 NSFTWGGNRNDQ-WVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLVKFTNDNEL 234
Query: 591 YKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKNSN 770
++G +F +DKR +I ++WN S + + CR A+ W ++N
Sbjct: 235 FRG--QFRYDKRLDDDPYCIEVIHRSWN-SAMSQGTHSSFFSLIECRRAISVWKHSSDTN 291
Query: 771 AADIINKCKKRLTEIKRLE 827
A I + +K L K ++
Sbjct: 292 AQSRIKRLRKDLDAEKSIQ 310
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 116 bits (290), Expect = 1e-23
Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Frame = +3
Query: 57 VDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQ 236
VDPI GL + W V+V + ++ ++ + ++Y + +R
Sbjct: 663 VDPIATGRGLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAF 722
Query: 237 WRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSG 416
WR + S W + GDFN++L EK GG F++F + D+ F G
Sbjct: 723 WRLMYSRFPVQSLPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKG 782
Query: 417 HPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSVIYK 596
F+W R G F++ERLDR G+ W+ PN ++ H+ SDH LLLD+N +
Sbjct: 783 PGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLN 842
Query: 597 GKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKNSN-- 770
+ F F++ W + +I ++W + G+ + + + +C AL WS+ K SN
Sbjct: 843 KTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPS 902
Query: 771 --AADIINKCKK 800
AD+++ +K
Sbjct: 903 VQVADLLSDIEK 914
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 116 bits (290), Expect = 1e-23
Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Frame = +3
Query: 42 NRWFCVDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKI 221
+R + V+P+G SGGL + W V + + I+ ++++ F+ VY
Sbjct: 20 DRVYTVNPVGLSGGLALFWKKGVNIDVRYADKNLID--FQIQFGSYDFFVSCVYGDPAFS 77
Query: 222 TRRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGD 401
+ W + + W + GDFN IL EK+GG +R +SF FK+ E +M +
Sbjct: 78 NKHLVWEKISKIGLNRKEPWCMLGDFNVILHNGEKRGGPRRGDSSFISFKDMLECCDMLE 137
Query: 402 IQFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTN 581
+ G+PF+W R +++ RLDR FG+ +W FP + + +D SD +L+ +
Sbjct: 138 LPSKGNPFSWGGKRNSL-WIQCRLDRCFGNKNWFRHFPVSNQEFLDKRGSDRRPVLVRLS 196
Query: 582 SVIYKGKKRFSFDKRWLQWDGIELIISQAWN-TSVIGTPLFQIQKRIANCRVALINWSRL 758
+ K F FDKR ++ I QAWN +G Q+ +R+ CR AL W +
Sbjct: 197 KTKEEYKGNFRFDKRLFNQPLVKEAIQQAWNGNQRVGG--MQVLERLKKCRSALSRWKQE 254
Query: 759 KNSNAADIINKCKKRLTEIKRLEG 830
NSN+ I++ + L E+++ G
Sbjct: 255 NNSNSLTCISQARAAL-ELEQSSG 277
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 116 bits (290), Expect = 1e-23
Identities = 69/250 (27%), Positives = 120/250 (48%)
Frame = +3
Query: 57 VDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQ 236
V+PIG+SGGL + W V++ + + I+ + E F+ +Y + R +
Sbjct: 59 VEPIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKE--FYLTCIYGEPVQAERGEL 116
Query: 237 WRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSG 416
W L W L GDFN+++ EK GG R +S +F++ + ++ SG
Sbjct: 117 WERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSG 176
Query: 417 HPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTNSVIYK 596
+ F+W NR E V+ RLDR + W FP A+ ++ SDH L+ + ++
Sbjct: 177 YQFSWYGNRNDE-LVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWR 235
Query: 597 GKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSRLKNSNAA 776
F +DKRW+Q +G + ++ W+ T ++K IA+CR + W R+ ++A
Sbjct: 236 KWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMMEK-IASCRREISKWKRVSKPSSA 294
Query: 777 DIINKCKKRL 806
I + + +L
Sbjct: 295 VRIQELQFKL 304
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 116 bits (290), Expect = 1e-23
Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 2/245 (0%)
Frame = +3
Query: 42 NRWFCVDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKI 221
+R + ++P+GR GGL + W V++ I++ + F+ VY D
Sbjct: 20 DRVYSIEPVGRCGGLAIFWKESVKIDIKFADKNLIDLQVQFGAVN--FFLSCVYGDPDFK 77
Query: 222 TRRDQWRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGD 401
R+ W L + W + GDFN+IL EEK GG KR + F FKE E M +
Sbjct: 78 KRKIVWERLSIIGVGRRERWCMVGDFNEILHNEEKIGGPKRCESYFKPFKEMHEACGMVE 137
Query: 402 IQFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDH--CLLLLD 575
+ +G+ FTWA R + +++ RLDR FG+ +W FP + Q ++M SDH LL L
Sbjct: 138 LASTGNRFTWAGRRY-DLWIQSRLDRAFGNKEWLKNFPASNQQFLEMRGSDHRPVLLKLM 196
Query: 576 TNSVIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPLFQIQKRIANCRVALINWSR 755
+ YKG +F FDKR L +E I Q+W+ + L + R+ CR + I R
Sbjct: 197 ASQDSYKG--QFRFDKRLLHKPRVEETILQSWDPLNVVNDLC-VSDRLKKCRGSQIIGGR 253
Query: 756 LKNSN 770
+ +N
Sbjct: 254 IGLTN 258
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 115 bits (289), Expect = 2e-23
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 9/259 (3%)
Frame = +3
Query: 57 VDPIGRSGGLLVSWSSKVEVIEVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRRDQ 236
V+PIG SGGL + +S V ++ I++ ++G+ + FVY R
Sbjct: 59 VEPIGNSGGLALFYSRDYPVKFIYVCDRLIDIETIIDGNR--VFITFVYGDPVVQYRELV 116
Query: 237 WRFLESAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDIQFSG 416
W+ L + WF+ GDFN+I+G EK+GG KRS +SF F E M D +G
Sbjct: 117 WKRLTRIGIVRSEPWFMIGDFNEIIGNHEKRGGKKRSESSFLPFCCMIENCGMIDFPSTG 176
Query: 417 HPFTWAN-------NREGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLD 575
F+W R+ ++ RLDR G+ +W+ + + V+++ SDH LL
Sbjct: 177 SLFSWVGKRSCGVAGRKRRDLIKCRLDRAMGNEEWHSIYSHTNVEYLQHRGSDHKPLLAS 236
Query: 576 TNSVIYKGKKRFSFDKRWLQWDGIELIISQAW--NTSVIGTPLFQIQKRIANCRVALINW 749
+ Y+ K F FDKRW+ G + + + W + G P FQ +I NCR + W
Sbjct: 237 IQNKPYRPYKHFIFDKRWINKPGFKESVQEGWAFPSRGEGVPFFQ---KIKNCRQTISIW 293
Query: 750 SRLKNSNAADIINKCKKRL 806
+ +N +I + +L
Sbjct: 294 KKSNKTNTEKLILELHSQL 312
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 115 bits (287), Expect = 3e-23
Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Frame = +3
Query: 15 TVCRKLKMDNRWFCVDPIG----RSGGLLVSWSS--KVEVIEVHNTHFCIEMAYRLEGSE 176
+V +KLK ++ VD G R GGL + W S KV+V+ + + H I + +G E
Sbjct: 47 SVKKKLKWEHM-VAVDCEGECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQG-E 104
Query: 177 EIFWAIFVYASTDKITRRDQWRFLESAKSKWGKM-WFLGGDFNDILGVEEKKGGNKRSFT 353
F I+ Y + +D+ L SA ++ + W GGDFN +L EKKGG+ +
Sbjct: 105 WRFTGIYGYPEEE---HKDKTGALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSR 161
Query: 354 SFADFKEFSEVMEMGDIQFSGHPFTWANNREGEGFVEERLDRFFGSPDWNLKFPNARVQH 533
F+ E D+ F G+ FTW NNR G+ ++ERLDRF + W +KFP + V H
Sbjct: 162 EADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSH 221
Query: 534 VDMFSSDHCLLLLDTN-----SVIYKGKKRFSFDKRWLQWDGIELIISQAWNTSVIGTPL 698
+ SDH ++ + K KRF F+ WL+ + ++ + W + GT
Sbjct: 222 LPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVKETW---MRGTDA 278
Query: 699 FQIQKRIANCRVALINWSRLKNSNAADIINKCKKRLTEIKRLE 827
R AN L++WS+ K + A I C+ ++ + E
Sbjct: 279 GINLARTAN---KLLSWSKQKFGHVAKEIRMCQHQMKVLMESE 318
>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
gi|241941722|gb|EES14867.1| hypothetical protein
SORBIDRAFT_07g013775 [Sorghum bicolor]
Length = 589
Score = 115 bits (287), Expect = 3e-23
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 9/216 (4%)
Frame = +3
Query: 57 VDPIGRSGGLLVSWSSKVEVI--EVHNTHFCIEMAYRLEGSEEIFWAIFVYASTDKITRR 230
VD +G+ GGL V W V+V+ H +E++ G+ F I Y + +
Sbjct: 305 VDCVGKGGGLAVLWRRGVDVVLRSKSKNHIDMEVS-ETRGNPWRFTGI--YGEPQEAMKW 361
Query: 231 DQWRFLE--SAKSKWGKMWFLGGDFNDILGVEEKKGGNKRSFTSFADFKEFSEVMEMGDI 404
W+ L+ +A+ + + W GDFN++L EK+GG R S FK+ EV E+ D+
Sbjct: 362 KTWQLLQDLAAQHQNNQAWLCAGDFNEVLYQHEKEGGVPRPQNSMDRFKQALEVSELHDL 421
Query: 405 QFSGHPFTWANNR-EGEGFVEERLDRFFGSPDWNLKFPNARVQHVDMFSSDHCLLLLDTN 581
F G+ FTW N + +GE + ERLDR + +W KFP RV++ D + SDH L++ T
Sbjct: 422 GFEGNVFTWRNKQSKGESHIRERLDRAVANFEWLAKFPLVRVKNGDTYHSDHRALVVCTE 481
Query: 582 SVIY----KGKKRFSFDKRWLQWDGIELIISQAWNT 677
+ K + F F+ WL+ +G + I+ + W +
Sbjct: 482 DDLVGRKPKAQGPFKFEAEWLKEEGFKDIVKEGWES 517