BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00015483
         (837 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   563   e-158
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   562   e-158
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   561   e-157
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   558   e-156
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   557   e-156
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   557   e-156
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   557   e-156
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   556   e-156
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 556   e-156
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   556   e-156
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   502   e-140
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             414   e-113
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   410   e-112
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   391   e-106
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   374   e-101
gb|AFM77886.1| replicase [Hosta virus X]                              369   e-100
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA...   369   e-100
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548...   361   2e-97
gb|AAF67818.1|AF111193_1 replicase [Potato virus X]                   360   4e-97
gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]          360   4e-97

>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  563 bits (1451), Expect = e-158
 Identities = 273/278 (98%), Positives = 278/278 (100%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN
Sbjct: 1080 FHEHQILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 1139

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1140 NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1199

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1200 IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1259

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1260 AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1319

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGV+DAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1320 LAKAQKKAGVRDAITNVVANYSLDAKLAYSLGDDLQDL 1357


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  562 bits (1448), Expect = e-158
 Identities = 272/278 (97%), Positives = 278/278 (100%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPN
Sbjct: 1075 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  561 bits (1445), Expect = e-157
 Identities = 271/278 (97%), Positives = 277/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 1075 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  558 bits (1437), Expect = e-156
 Identities = 269/278 (96%), Positives = 276/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEH ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 1075 FHEHHILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  557 bits (1436), Expect = e-156
 Identities = 270/278 (97%), Positives = 276/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 1075 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  557 bits (1436), Expect = e-156
 Identities = 270/278 (97%), Positives = 276/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 1075 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  557 bits (1436), Expect = e-156
 Identities = 270/278 (97%), Positives = 276/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 1075 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score =  556 bits (1434), Expect = e-156
 Identities = 269/278 (96%), Positives = 276/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 406  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 465

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 466  NIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 525

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDC
Sbjct: 526  IEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDC 585

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 586  AISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 645

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 646  LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 683


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  556 bits (1434), Expect = e-156
 Identities = 270/278 (97%), Positives = 276/278 (99%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN
Sbjct: 1063 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 1122

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1123 NIMINCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1182

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDC
Sbjct: 1183 IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDC 1242

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSFALLK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1243 AIAQVCPEKPSFALLKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1302

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ANYSLDAKLAYSLGD+L DL
Sbjct: 1303 LAKAQKKAGVKDAITNVVANYSLDAKLAYSLGDELHDL 1340


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  556 bits (1434), Expect = e-156
 Identities = 269/278 (96%), Positives = 275/278 (98%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PN
Sbjct: 1075 FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPN 1134

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV
Sbjct: 1135 NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 1194

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDC
Sbjct: 1195 IEGYLDIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDC 1254

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE
Sbjct: 1255 AIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 1314

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKAQKKAGVKDAI+NV+ NYSLDAKLAYSLGDDLQDL
Sbjct: 1315 LAKAQKKAGVKDAITNVVDNYSLDAKLAYSLGDDLQDL 1352


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  502 bits (1292), Expect = e-140
 Identities = 242/278 (87%), Positives = 260/278 (93%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F E++ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PN
Sbjct: 1056 FPENKILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPN 1115

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            NIMINCE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFEILKAK+FNLPEWV
Sbjct: 1116 NIMINCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKAKFFNLPEWV 1175

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            IEGYLDIKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTHTRF IP+  AQ+YAGDDC
Sbjct: 1176 IEGYLDIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPDHVAQLYAGDDC 1235

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIA+VC EKPSFALLKNRIALQAKPAY PQ RG WAEFCGYLITPKGLIKDPLKLH+SLE
Sbjct: 1236 AIAEVCQEKPSFALLKNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLIKDPLKLHSSLE 1295

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LAKA +K G KDAI+NV+ANYSLDAK+AYSLGDDLQDL
Sbjct: 1296 LAKALRKQGRKDAITNVVANYSLDAKMAYSLGDDLQDL 1333


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  414 bits (1064), Expect = e-113
 Identities = 203/278 (73%), Positives = 228/278 (82%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F +HQIL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN
Sbjct: 1082 FEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPN 1141

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            +I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEILKAK+FN+PE +
Sbjct: 1142 HIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEILKAKHFNIPEEI 1201

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD 
Sbjct: 1202 IQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDS 1261

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIA V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+
Sbjct: 1262 AIACVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLK 1321

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            L +A   +G K  +     NY  D  LAY+L D L ++
Sbjct: 1322 LLQA--TSGSKKELVEAAGNYERDVGLAYALKDSLYEI 1357


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  410 bits (1055), Expect = e-112
 Identities = 202/278 (72%), Positives = 227/278 (81%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F +HQIL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN
Sbjct: 1082 FEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPN 1141

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            +I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQD AMLQFEILKAK+FN+P  +
Sbjct: 1142 HIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFEILKAKHFNIPGEI 1201

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD 
Sbjct: 1202 IQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDS 1261

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            AIA V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+
Sbjct: 1262 AIACVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLK 1321

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            L +A   +G K  +     NY  D  LAY+L D L ++
Sbjct: 1322 LLQA--TSGSKKELVEAAGNYERDVGLAYALKDSLYEI 1357


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  391 bits (1005), Expect = e-106
 Identities = 200/283 (70%), Positives = 221/283 (78%), Gaps = 5/283 (1%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F E  ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P 
Sbjct: 1149 FGEKDILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPE 1208

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            +IMINCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PEWV
Sbjct: 1209 HIMINCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPEWV 1268

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            +EGYLDIKL  +IFLGTLSIMRLTGE  TFDANTECNIAYTHTRF+IPEG AQ     D 
Sbjct: 1269 LEGYLDIKLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTHTRFDIPEGVAQ-----DS 1323

Query: 295  AIAQVCPEKPSFALLKNRIALQ-----AKPAYTPQERGQWAEFCGYLITPKGLIKDPLKL 131
            A+   C EKPSF L+++ ++L+      KP    Q  G+WAEFCGYLITPKGLIKDPLKL
Sbjct: 1324 AMDATCLEKPSFKLIESELSLKLYAGDCKPCLKAQIPGEWAEFCGYLITPKGLIKDPLKL 1383

Query: 130  HASLELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
             AS  LAK + K      + N + NY+ D KLAY LGDDL +L
Sbjct: 1384 AASFRLAKERGKR----ELDNCLENYARDMKLAYDLGDDLLEL 1422


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  374 bits (959), Expect = e-101
 Identities = 183/278 (65%), Positives = 219/278 (78%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F ++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A  P 
Sbjct: 1403 FDKNTIALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPP 1462

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
             IMINCEK PQ LS W+ NYW F+  +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV
Sbjct: 1463 EIMINCEKDPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWV 1522

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            +EGYLDIK + K+F G LSIMRLTGEGPTFDANTECNIAYTH RF++P+GTAQ+YAGDD 
Sbjct: 1523 LEGYLDIKTNAKVFSGVLSIMRLTGEGPTFDANTECNIAYTHLRFDVPKGTAQLYAGDDS 1582

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            A++ + PE+PSFA  K ++ L +KPA   Q+RG WAEFCGYLITP G++KDP KL A++ 
Sbjct: 1583 ALSCLPPERPSFADFKQQLTLTSKPALFAQKRGFWAEFCGYLITPLGIMKDPAKLAATVV 1642

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LA+ Q K      +     +++LD KLAY   D L ++
Sbjct: 1643 LAQKQNK------LHECWRSHALDLKLAYVHRDALTEV 1674


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  369 bits (947), Expect = e-100
 Identities = 183/278 (65%), Positives = 216/278 (77%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F ++ I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P 
Sbjct: 1155 FDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPK 1214

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            +I+INCEKTP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +
Sbjct: 1215 HILINCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDI 1274

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            I GY+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD 
Sbjct: 1275 ILGYMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDS 1334

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            A+++VCPEK SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  
Sbjct: 1335 ALSKVCPEKDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWV 1394

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LA    K G    I   + +Y  D KL+Y LGD LQ+L
Sbjct: 1395 LA---TKLGTLQQI-KCVNSYGEDLKLSYDLGDHLQEL 1428


>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
            [Hosta virus X]
          Length = 1507

 Score =  369 bits (947), Expect = e-100
 Identities = 183/278 (65%), Positives = 216/278 (77%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F ++ I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P 
Sbjct: 1189 FDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPK 1248

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            +I+INCEKTP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +
Sbjct: 1249 HILINCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDI 1308

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            I GY+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD 
Sbjct: 1309 ILGYMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDS 1368

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            A+++VCPEK SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  
Sbjct: 1369 ALSKVCPEKDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWV 1428

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LA    K G    I   + +Y  D KL+Y LGD LQ+L
Sbjct: 1429 LA---TKLGTLQQI-KCVNSYGEDLKLSYDLGDHLQEL 1462


>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
            replicase [Tamus red mosaic virus]
          Length = 1501

 Score =  361 bits (927), Expect = 2e-97
 Identities = 172/276 (62%), Positives = 212/276 (76%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            FH++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+   P 
Sbjct: 1202 FHKNTIALFLKSQWVKKMEKLGADKIKPGQTIASFQQAAVMLYGTMARYMRRMREVFQPT 1261

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
            ++ INCE++P+ +S W+ N W+F   +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV
Sbjct: 1262 HVFINCEQSPEGMSDWIKNEWNFKGNAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWV 1321

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            +EGYLDIK +  +F GTL IMRLTGEGPTFDANTECNIAYTH RF +P+GTAQ YAGDD 
Sbjct: 1322 LEGYLDIKTNAHVFTGTLGIMRLTGEGPTFDANTECNIAYTHLRFNVPKGTAQAYAGDDS 1381

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
             +A +  E+ SF + KN++ L AKP Y PQ +G+WA+FCG+L TP G +K+PLK+ A +E
Sbjct: 1382 VLACIPEERESFKMWKNKLELTAKPEYFPQMQGEWAQFCGFLFTPLGALKEPLKMLAVVE 1441

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQ 8
            LAK       +  +   + +Y+LD  L Y  GD LQ
Sbjct: 1442 LAKQ------RGELKKNMRSYALDVLLNYQHGDALQ 1471


>gb|AAF67818.1|AF111193_1 replicase [Potato virus X]
          Length = 1456

 Score =  360 bits (923), Expect = 4e-97
 Identities = 172/278 (61%), Positives = 214/278 (76%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F E++I++FLKSQWV K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P 
Sbjct: 1152 FDENKIMVFLKSQWVTKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPK 1211

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
             + INCE TP+D+S W LN W+F +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +
Sbjct: 1212 EVFINCETTPEDMSAWALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEI 1271

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD 
Sbjct: 1272 IQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDS 1331

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            A+  V   KPSF  L++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+
Sbjct: 1332 ALDCVPEVKPSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLK 1391

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LA+A      K  +     +Y +D   AY   D L DL
Sbjct: 1392 LAEA------KGELKKCQDSYEIDLSYAYDHKDSLHDL 1423


>gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]
          Length = 1456

 Score =  360 bits (923), Expect = 4e-97
 Identities = 173/278 (62%), Positives = 214/278 (76%)
 Frame = -3

Query: 835  FHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPN 656
            F E++I++FLKSQWV K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P 
Sbjct: 1152 FDENKIMVFLKSQWVTKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPK 1211

Query: 655  NIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWV 476
             + INCE TP+D+S WVLN WDF +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +
Sbjct: 1212 EVFINCETTPEDMSAWVLNNWDFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEI 1271

Query: 475  IEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDC 296
            I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD 
Sbjct: 1272 IQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDS 1331

Query: 295  AIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLE 116
            A+  V   K SF  L++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+
Sbjct: 1332 ALDCVPEVKHSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLK 1391

Query: 115  LAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 2
            LA+A      K  +     +Y +D   AY   D L DL
Sbjct: 1392 LAEA------KGELKKCQDSYEIDLSYAYDHKDSLHDL 1423