BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00015290
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise...   167   1e-39
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   127   2e-27
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   127   2e-27
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   127   2e-27
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe...   124   1e-26
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   121   8e-26
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...   120   2e-25
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc...   119   3e-25
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   117   2e-24
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              116   4e-24
gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus...   115   8e-24
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro...   114   1e-23
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]              113   3e-23
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   112   7e-23
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   111   9e-23
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]       110   2e-22
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   110   3e-22
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr...   100   2e-19
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ...   100   3e-19
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha...    99   5e-19

>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
          Length = 1094

 Score =  167 bits (423), Expect = 1e-39
 Identities = 76/118 (64%), Positives = 97/118 (82%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           GHGRVQFD+   K +ALSLS +RKL+F+G YL +S SF DII RP++P+NR+EN  GL L
Sbjct: 23  GHGRVQFDSPKFKAEALSLSEERKLVFKGHYLCVSHSFEDIITRPVDPENRLENAAGLCL 82

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
           LAGIM++GDCMGILESW+G KLWV+PE+KKL  F+++E E YKLE+Q+GD+ ET  CC
Sbjct: 83  LAGIMLKGDCMGILESWNGCKLWVLPERKKLLLFLDNEEESYKLEIQYGDICETHLCC 140


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  127 bits (319), Expect = 2e-27
 Identities = 62/117 (52%), Positives = 84/117 (71%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           GHGRVQF+    K+  LSLS Q  LLF+G  LS+  SF+DII RP+EP+ R ++G   +L
Sbjct: 54  GHGRVQFETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDG---IL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGC 6
             G++V+ D M +LE+W+ VK  +MPE+K LEF+V+H  ECY+LEVQFGDV+E   C
Sbjct: 111 HTGLLVKNDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVC 167


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
           gi|297733815|emb|CBI15062.3| unnamed protein product
           [Vitis vinifera]
          Length = 1127

 Score =  127 bits (319), Expect = 2e-27
 Identities = 66/118 (55%), Positives = 85/118 (72%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF+   AK  A  LS Q  L+FRG  LSIS +F+DII RP+EP+N+V++G   VL
Sbjct: 52  GFGRVQFETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSG---VL 108

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
             G +V  DCM +LESW+GVK  VMPE+ ++EF+V+ +GE YKLEV F DVLE+  CC
Sbjct: 109 HVGFLVEDDCMLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACC 166


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/118 (51%), Positives = 88/118 (74%), Gaps = 1/118 (0%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           GHGRVQF+ + +K+++LSLS Q KL+F+G  L ++ SF+DII RP+E   R + G   +L
Sbjct: 54  GHGRVQFETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKG---IL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNH-EGECYKLEVQFGDVLETRGC 6
             GI++  D M +LE+W+ VK  +MPE+K LEF+V+H +GECY+LEVQFGD++ET  C
Sbjct: 111 HTGILLENDYMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCEC 168


>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  124 bits (311), Expect = 1e-26
 Identities = 60/117 (51%), Positives = 85/117 (72%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF   +AK +A SLS Q  L+F+   L +S +++DII RP++P+ R+    G VL
Sbjct: 52  GFGRVQFTTLEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLN---GTVL 108

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGC 6
            AG MV+GDCM +LESW+GV+ WVMPE+K++EF+V    ECYKLE+ F +++E+ GC
Sbjct: 109 HAGFMVKGDCMSMLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGC 165


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum
           lycopersicum]
          Length = 1119

 Score =  121 bits (304), Expect = 8e-26
 Identities = 61/117 (52%), Positives = 81/117 (69%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           GHGRVQF+    K+  LSL+ Q  LLF+G  LS+  SF+DII RP+EP+ R + G   +L
Sbjct: 54  GHGRVQFETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAG---IL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGC 6
             G++V  D M +LE+W+ VK  +MPE+K LEF+V+H  ECY+LEVQFGDV E   C
Sbjct: 111 HTGLLVEKDVMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLC 167


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
           gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
           2 [Cucumis sativus]
          Length = 1117

 Score =  120 bits (301), Expect = 2e-25
 Identities = 60/118 (50%), Positives = 80/118 (67%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF   +AK KA+SLS Q  L+F    L  S   +DI+ RP+   NR ENG   VL
Sbjct: 52  GSGRVQFTTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENG---VL 108

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
             G M++ + M +LESW+GVK W+MPE++++EF++ HE ECYKLEV F ++LET G C
Sbjct: 109 HVGFMLKEERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHC 166


>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
           gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
           [Medicago truncatula]
          Length = 1308

 Score =  119 bits (299), Expect = 3e-25
 Identities = 56/118 (47%), Positives = 81/118 (68%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF+  +AK KAL+L+  +KLL    +L +  S +DII RP  P+NR+ NG    L
Sbjct: 54  GVGRVQFETLEAKSKALTLAENKKLLLSSHFLCLDASSDDIIPRPALPRNRINNG---AL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG  +  DCM +L+SW+GV+ WVMPE+++L+F+V H  +C+KLE+ F ++LE  G C
Sbjct: 111 YAGFPIGPDCMSVLQSWEGVRGWVMPERQRLDFWVTHGDQCFKLEIPFENILECDGYC 168


>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
          Length = 1120

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/118 (49%), Positives = 83/118 (70%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF+  DA+ +ALSLS   +LLF   +L +S + +DIIFRP   Q+R++NG   VL
Sbjct: 55  GFGRVQFETLDARSRALSLSQLNQLLFNRHFLRLSETDSDIIFRP---QHRLQNG---VL 108

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG M+    M +LESW+G+  WV+P++K+L+F+V H G+CY+LE  F D+LE+ G C
Sbjct: 109 YAGFMLSDHRMSVLESWEGIAGWVLPQRKRLDFWVWHNGDCYRLEFLFEDILESHGYC 166


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/118 (48%), Positives = 78/118 (66%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF    AK  AL LS    LLF+   L +S +++DII RP+   +R++ G   VL
Sbjct: 54  GFGRVQFAAPQAKSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGG---VL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG M   DC+ +LE W+GV+ W+MPE+++LEF+V  +GECYKL+  F D+ ET GCC
Sbjct: 111 HAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCC 168


>gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
          Length = 1119

 Score =  115 bits (287), Expect = 8e-24
 Identities = 58/118 (49%), Positives = 84/118 (71%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF+  DAK +ALSLS  ++LL    +L +S +  DIIFRPL   +R++NG   VL
Sbjct: 55  GAGRVQFEALDAKSRALSLSQLQQLLIHSHFLRLSDTSEDIIFRPL---HRLQNG---VL 108

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG+M+  D M +LESW+GV   V+P+++KL+F V H+G+CY++E+ F D+LE+ G C
Sbjct: 109 YAGLMLSDDRMSVLESWEGVAGLVVPQRRKLDFLVLHDGDCYRVEIFFEDILESHGYC 166


>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
           gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score =  114 bits (285), Expect = 1e-23
 Identities = 57/118 (48%), Positives = 81/118 (68%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF   +AK KA  LS +  L+F+   L +S +++DII RP+   +R++ G   VL
Sbjct: 59  GFGRVQFATLEAKSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGG---VL 115

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
             G MV+ D + +LE W+ V+ W+MPE+++LEF++ + GECYKLEV F DVLET GCC
Sbjct: 116 HVGFMVQDDYLRVLERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCC 173


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  113 bits (282), Expect = 3e-23
 Identities = 56/118 (47%), Positives = 77/118 (65%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF    A   AL LS    LLF+   L +S +++DII RP+   +R++ G   VL
Sbjct: 54  GFGRVQFAAPQAMSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGG---VL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG M   DC+ +LE W+GV+ W+MPE+++LEF+V  +GECYKL+  F D+ ET GCC
Sbjct: 111 HAGFMSSDDCLRVLERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCC 168


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
          Length = 1122

 Score =  112 bits (279), Expect = 7e-23
 Identities = 56/116 (48%), Positives = 78/116 (67%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF+  +AK KALSLS   KLLF   +L ++ S +DI+ RP  P NR+ NG    L
Sbjct: 54  GSGRVQFETFEAKSKALSLSSNDKLLFNSHFLRLAASSDDIVPRPPLPCNRLHNG---TL 110

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRG 9
            AG  +  D M +++SW+GVK WVMPE+ +L+F+V H  +C+KLE+ F ++LE  G
Sbjct: 111 HAGFPLGPDRMSVIQSWEGVKGWVMPERNRLDFWVTHHDQCFKLEIPFENILECDG 166


>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
           max]
          Length = 1121

 Score =  111 bits (278), Expect = 9e-23
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF+  DA+ +ALSLS    LLF   +L +S +  DIIFRP   Q+R+ NG   VL
Sbjct: 56  GFGRVQFETLDARSRALSLSQLNHLLFHRHFLRLSETDADIIFRP---QHRLHNG---VL 109

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG ++    M +LESW+GV  WV+P +K+L+F+V H G+CY+LE  F D+LE+ G C
Sbjct: 110 YAGFVLSDHRMSVLESWEGVAGWVLPLRKRLDFWVWHNGDCYRLEFLFEDILESHGYC 167


>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
          Length = 1115

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/118 (47%), Positives = 79/118 (66%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G GRVQF +  AK+ A +LS     +FR   L I  + +DI+  P++P+ R+E+G   VL
Sbjct: 53  GFGRVQFTSLAAKLVAQALSLSNNFVFRSRNLGIFDTHDDIVALPVDPKLRLEDG---VL 109

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG M+R D M +L+SW+GV+ W MPE+ ++EF+V  + +CYKLEV F DVLET G C
Sbjct: 110 HAGFMIRDDRMAVLQSWEGVRAWAMPERNRVEFWVWSDEDCYKLEVAFEDVLETVGYC 167


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca
           subsp. vesca]
          Length = 1136

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/118 (44%), Positives = 80/118 (67%)
 Frame = -3

Query: 356 GHGRVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVL 177
           G+GR+QF     K +A SLS    L F+   L +  + +DII RPL+P++R+ +    VL
Sbjct: 55  GYGRIQFTALRHKARAQSLSSSADLFFKSHNLRLFEAHDDIIPRPLDPRHRLNS---TVL 111

Query: 176 LAGIMVRGDCMGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
            AG +V  + M +LESW+GV+ WVMPE+K++EF+V   G+CYK+E+ F +++E+ GCC
Sbjct: 112 HAGFVVNDETMSVLESWEGVRAWVMPERKRVEFWVWRVGDCYKMEIAFENIVESVGCC 169


>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
           gi|557097970|gb|ESQ38406.1| hypothetical protein
           EUTSA_v10028370mg [Eutrema salsugineum]
          Length = 1124

 Score =  100 bits (249), Expect = 2e-19
 Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = -3

Query: 347 RVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVLLAG 168
           RVQF + + K +A  LS Q KLLF+   L IS +++DII RP++P+  ++   G+VL  G
Sbjct: 56  RVQFTSLEVKSRAHLLSSQSKLLFKSRNLRISEAYDDIIPRPVDPRKMLD---GVVLTVG 112

Query: 167 IMVRGDC-MGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
                +     LE W+GV+ WV+ EK+++EF+V   GECYKLEV+F D++ET GCC
Sbjct: 113 FPEADEGRFCALEKWEGVRCWVIEEKRRVEFWVCDGGECYKLEVRFEDIVETVGCC 168


>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
           2 [Arabidopsis lyrata subsp. lyrata]
          Length = 1134

 Score =  100 bits (248), Expect = 3e-19
 Identities = 51/116 (43%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
 Frame = -3

Query: 347 RVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVLLAG 168
           RVQF   + K +A  LS Q KLLF+   L +S +++DII RP++P+ R+++   +VL  G
Sbjct: 58  RVQFTTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRRRLDD---IVLTVG 114

Query: 167 IMVRGDC-MGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
                +     LE WDGV+ W++ EK++LEF+V   GECYK+EV+F D++ET  CC
Sbjct: 115 FPESDEKRFCALEKWDGVRCWILEEKRRLEFWVWENGECYKIEVRFEDIVETLCCC 170


>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
           gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
           Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
           AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
           AltName: Full=RNA-directed RNA polymerase 2
           gi|3600048|gb|AAC35535.1| similar to hypothetical
           proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
           elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
           gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
           polymerase [Arabidopsis thaliana]
           gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
           polymerase [Arabidopsis thaliana]
           gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
           2 [Arabidopsis thaliana]
          Length = 1133

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/116 (42%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
 Frame = -3

Query: 347 RVQFDNADAKIKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPQNRVENGEGLVLLAG 168
           RVQF   + K +A  LS Q KLLF+   L +S +++DII RP++P+ R+++   +VL  G
Sbjct: 58  RVQFTTLEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDD---IVLTVG 114

Query: 167 IMVRGDC-MGILESWDGVKLWVMPEKKKLEFFVNHEGECYKLEVQFGDVLETRGCC 3
                +     LE WDGV+ W++ EK+++EF+V   G+CYK+EV+F D++ET  CC
Sbjct: 115 FPESDEKRFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCC 170