BLASTX nr result
ID: Rehmannia22_contig00015164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00015164
(759 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containi... 45 4e-10
ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containi... 44 8e-10
ref|NP_194799.1| pentatricopeptide repeat-containing protein [Ar... 47 1e-09
gb|EMJ05798.1| hypothetical protein PRUPE_ppa002987mg [Prunus pe... 47 2e-09
ref|XP_002867333.1| pentatricopeptide repeat-containing protein ... 46 3e-09
ref|XP_004507756.1| PREDICTED: pentatricopeptide repeat-containi... 49 3e-09
ref|XP_006285932.1| hypothetical protein CARUB_v10007444mg [Caps... 46 8e-09
ref|XP_004288724.1| PREDICTED: pentatricopeptide repeat-containi... 47 1e-08
gb|EXB42930.1| hypothetical protein L484_013952 [Morus notabilis] 41 6e-08
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 42 8e-08
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi... 42 8e-08
gb|EPS60782.1| hypothetical protein M569_14020, partial [Genlise... 44 8e-08
ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containi... 42 1e-07
ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citr... 42 1e-07
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ... 42 2e-07
ref|XP_002309359.1| pentatricopeptide repeat-containing family p... 41 3e-06
gb|EOY31480.1| Pentatricopeptide repeat (PPR) superfamily protei... 42 7e-06
ref|XP_002533229.1| pentatricopeptide repeat-containing protein,... 41 8e-06
>ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Solanum lycopersicum]
Length = 791
Score = 45.1 bits (105), Expect(3) = 4e-10
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K+G HE+VLTG++SLYS CG G+I + DL++ NAMI
Sbjct: 243 AVKMGYDVHEYVLTGLISLYSKCGDVLTAKLLFGMIKEPDLISCNAMI 290
Score = 43.1 bits (100), Expect(3) = 4e-10
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = -3
Query: 223 NDSNRSSKGFYIE-----HKVIRCTMAGLIPFST---HLVICILL----VKSTVVM*CLV 80
ND N SS + E KV T+ GLIP S HL + + VK+ +V+
Sbjct: 296 NDENESSVRLFRELLVHGEKVNSSTIVGLIPVSCPFGHLNLTCSIHGFCVKTGMVL--NP 353
Query: 79 LLSTALTTVYWWLHEIQLSRKLFDES 2
STALTTVY L+E++L+R+LFDES
Sbjct: 354 SASTALTTVYSRLNEMELARRLFDES 379
Score = 22.3 bits (46), Expect(3) = 4e-10
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N ++ GLV+ F+ES+R
Sbjct: 186 NTMVSGLVRNCCFEESLR 203
>ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like isoform X1 [Solanum tuberosum]
gi|565353404|ref|XP_006343622.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g30700-like isoform X2 [Solanum tuberosum]
Length = 791
Score = 44.3 bits (103), Expect(3) = 8e-10
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K+G HE+VLTG++S+YS CG G+I + DL++ NAMI
Sbjct: 243 AVKMGYDVHEYVLTGLISMYSKCGDVSTAKLLFGMIREPDLISCNAMI 290
Score = 43.5 bits (101), Expect(3) = 8e-10
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Frame = -3
Query: 223 NDSNRSSKGFYIE-----HKVIRCTMAGLIPFST---HLVICILL----VKSTVVM*CLV 80
N+ N SS + E KV T+ GLIP S HL + + VKS +V V
Sbjct: 296 NNENESSVRLFRELLVHGEKVNSSTIVGLIPVSCPFGHLTLTCSIHGFCVKSGMVSNPSV 355
Query: 79 LLSTALTTVYWWLHEIQLSRKLFDES 2
STALTTVY L+E++L+R+LFDES
Sbjct: 356 --STALTTVYSRLNEMELARRLFDES 379
Score = 21.6 bits (44), Expect(3) = 8e-10
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N ++ GLV+ F+ESI+
Sbjct: 186 NTMVSGLVRNCCFEESIQ 203
>ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis
thaliana] gi|7269971|emb|CAB79788.1| putative protein
[Arabidopsis thaliana] gi|332660398|gb|AEE85798.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 792
Score = 47.4 bits (111), Expect(2) = 1e-09
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCGGLIM---------KLDLVAYNAMI 217
A K G +SH++VLTG +SLYS CG + M K D+VAYNAMI
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Score = 42.0 bits (97), Expect(2) = 1e-09
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = -3
Query: 166 TMAGLIPFSTHLVICILL----VKSTVVM*CLVLLSTALTTVYWWLHEIQLSRKLFDES 2
T+ L+P S HL++ + +KS + V STALTTVY L+EI+ +RKLFDES
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASV--STALTTVYSKLNEIESARKLFDES 380
>gb|EMJ05798.1| hypothetical protein PRUPE_ppa002987mg [Prunus persica]
Length = 614
Score = 46.6 bits (109), Expect(2) = 2e-09
Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+KVG HS HVLTG+VSLYS C G I + DL+ YNAMI
Sbjct: 67 ALKVGFHSDVHVLTGLVSLYSKCKELETARLLFGHITQPDLICYNAMI 114
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 CNDSNRSSKGFYIE-----HKVIRCTMAGLIPFST---HLVICILL----VKSTVVM*CL 83
CN+ SS + E KV T+ GLIP S+ HL + L VKS +V
Sbjct: 119 CNNETVSSVSLFRELLASGEKVNSSTIVGLIPVSSPFGHLQLTGSLQTFCVKSGIVSHPS 178
Query: 82 VLLSTALTTVYWWLHEIQLSRKLFDES 2
V STA TVY L+EI+L+R+LFDES
Sbjct: 179 V--STAFVTVYCRLNEIELARQLFDES 203
>ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313169|gb|EFH43592.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 792
Score = 46.2 bits (108), Expect(2) = 3e-09
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCGGLIM---------KLDLVAYNAMI 217
A K G +SH++VLTG +SLYS CG + M + D+VAYNAMI
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMI 294
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = -3
Query: 181 KVIRCTMAGLIPFSTHLVICILL----VKSTVVM*CLVLLSTALTTVYWWLHEIQLSRKL 14
K+ T+ L+P S HL++ + +KS + V STALTTVY L+EI+ +RKL
Sbjct: 319 KLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSV--STALTTVYSKLNEIESARKL 376
Query: 13 FDES 2
FDES
Sbjct: 377 FDES 380
>ref|XP_004507756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cicer arietinum]
Length = 783
Score = 48.5 bits (114), Expect(3) = 3e-09
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K G H +++V+TG++SLYS CG G+I K DL+AYNAMI
Sbjct: 235 ALKKGFHFYDYVMTGLISLYSKCGDTKTARLLFGMIGKPDLIAYNAMI 282
Score = 38.1 bits (87), Expect(3) = 3e-09
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Frame = -3
Query: 181 KVIRCTMAGLIPFST---HLVICILL----VKSTVVM*CLVLLSTALTTVYWWLHEIQLS 23
KV T+ GLIP + HL + L+ +KS +++ V STA T +Y L+EI ++
Sbjct: 307 KVSSSTIVGLIPLPSPFGHLHLACLIHGFCLKSGIILNPTV--STAFTAIYNKLNEIDMA 364
Query: 22 RKLFDES 2
R+LFDES
Sbjct: 365 RQLFDES 371
Score = 20.8 bits (42), Expect(3) = 3e-09
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N++I GLVK FD+ ++
Sbjct: 178 NSMINGLVKNCCFDDCVQ 195
>ref|XP_006285932.1| hypothetical protein CARUB_v10007444mg [Capsella rubella]
gi|482554637|gb|EOA18830.1| hypothetical protein
CARUB_v10007444mg [Capsella rubella]
Length = 790
Score = 46.2 bits (108), Expect(2) = 8e-09
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCGGLIM---------KLDLVAYNAMI 217
A K G +SH +VLTG +SLYS CG + M K D+VAYNAMI
Sbjct: 245 ATKTGCYSHNYVLTGFISLYSKCGKIKMATTLFREFHKPDVVAYNAMI 292
Score = 40.4 bits (93), Expect(2) = 8e-09
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = -3
Query: 166 TMAGLIPFSTHLVICILL----VKSTVVM*CLVLLSTALTTVYWWLHEIQLSRKLFDES 2
T+ LIP S HL++ + +KS + V ST+LTTVY L+EI+ +RKLFDES
Sbjct: 322 TLMSLIPVSGHLMLIYAIHGYSLKSNFLSHTSV--STSLTTVYSKLNEIESARKLFDES 378
>ref|XP_004288724.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Fragaria vesca subsp. vesca]
Length = 790
Score = 47.4 bits (111), Expect(2) = 1e-08
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K G H HVLTG+VSLYS CG G+I + DL+ YNAMI
Sbjct: 243 AVKAGFHDDVHVLTGLVSLYSKCGELETARRVFGMIGEPDLICYNAMI 290
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 CNDSNRSSKGFYIE-----HKVIRCTMAGLIPFST---HLVI--CI--LLVKSTVVM*CL 83
CN+ + G + E KV T+ GL+P S HL + C+ VKS +V
Sbjct: 295 CNNETVLAVGLFKELLGYGKKVNSSTIVGLVPVSCPFGHLQLSGCLQSFCVKSGIVSHPS 354
Query: 82 VLLSTALTTVYWWLHEIQLSRKLFDES 2
V STAL TVY L+EI +R+LFDES
Sbjct: 355 V--STALVTVYCRLNEIDSARQLFDES 379
>gb|EXB42930.1| hypothetical protein L484_013952 [Morus notabilis]
Length = 781
Score = 41.2 bits (95), Expect(3) = 6e-08
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+KVG S +V+TG+VSLYS CG G + DL+ YNAMI
Sbjct: 234 AIKVGLDSDVYVVTGLVSLYSKCGETDKARFLFGQLSYPDLICYNAMI 281
Score = 38.9 bits (89), Expect(3) = 6e-08
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 CNDSNRSSKGFYIE-----HKVIRCTMAGLIPFST---HLVICILLVKSTVVM*CLVL-- 77
CN+ +S + E KV T+ GLIP S+ HL + + + + C +L
Sbjct: 286 CNNDTEASLRLFKELLASGKKVNSSTIVGLIPVSSPFGHLQLASSI--QSFCLKCGILSD 343
Query: 76 --LSTALTTVYWWLHEIQLSRKLFDES 2
+STALTTVY L+E + +R++FDES
Sbjct: 344 PSVSTALTTVYCRLNETESARQVFDES 370
Score = 22.7 bits (47), Expect(3) = 6e-08
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIRFL 344
N +I GLV+ F +S+R L
Sbjct: 177 NTMISGLVRNFCFSDSVRVL 196
>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 41.6 bits (96), Expect(3) = 8e-08
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG----GLIM-----KLDLVAYNAMI 217
A K G HS +VLTG++SLYS CG G I+ + DL++YNAMI
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMI 287
Score = 39.3 bits (90), Expect(3) = 8e-08
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Frame = -3
Query: 181 KVIRCTMAGLIPFS---THLVICILLVKSTVVM*CLVL--LSTALTTVYWWLHEIQLSRK 17
+V T+ GLIP HL + L+ ++ + ++ +STALTTVY L+E+Q +R+
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQ 371
Query: 16 LFDES 2
LFDES
Sbjct: 372 LFDES 376
Score = 21.6 bits (44), Expect(3) = 8e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N +I G + YF++SIR
Sbjct: 183 NTMISGFSRNSYFEDSIR 200
>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 41.6 bits (96), Expect(3) = 8e-08
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG----GLIM-----KLDLVAYNAMI 217
A K G HS +VLTG++SLYS CG G I+ + DL++YNAMI
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMI 287
Score = 39.3 bits (90), Expect(3) = 8e-08
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Frame = -3
Query: 181 KVIRCTMAGLIPFS---THLVICILLVKSTVVM*CLVL--LSTALTTVYWWLHEIQLSRK 17
+V T+ GLIP HL + L+ ++ + ++ +STALTTVY L+E+Q +R+
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQ 371
Query: 16 LFDES 2
LFDES
Sbjct: 372 LFDES 376
Score = 21.6 bits (44), Expect(3) = 8e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N +I G + YF++SIR
Sbjct: 183 NTMISGFSRNSYFEDSIR 200
>gb|EPS60782.1| hypothetical protein M569_14020, partial [Genlisea aurea]
Length = 774
Score = 44.3 bits (103), Expect(3) = 8e-08
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K G ++H++TG+V LYS CG GL + DLVAYNAMI
Sbjct: 225 ALKFGCDFNDHLITGLVKLYSKCGDISKARSMFGLFINPDLVAYNAMI 272
Score = 33.9 bits (76), Expect(3) = 8e-08
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 181 KVIRCTMAGLIPFST---HLVICILL----VKSTVVM*CLVLLSTALTTVYWWLHEIQLS 23
+V T+ GLIP HL + + +KS V C V STAL +VY L+E+ L+
Sbjct: 297 RVSSSTIVGLIPTCHPYGHLELTQSIHGFCMKSCFVSHCSV--STALMSVYSRLNELNLA 354
Query: 22 RKLFDES 2
R++FDES
Sbjct: 355 RQIFDES 361
Score = 24.3 bits (51), Expect(3) = 8e-08
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESI 353
N ++ GLVK YFD++I
Sbjct: 168 NTMLSGLVKNSYFDDAI 184
>ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Citrus sinensis]
Length = 784
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 9/47 (19%)
Frame = -1
Query: 330 MKVGRHSHEHVLTGMVSLYSNCGGL---------IMKLDLVAYNAMI 217
+K+G H H +VLTG+VS YS CG + I++ DL++ NAMI
Sbjct: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
Score = 41.2 bits (95), Expect(2) = 1e-07
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 CNDSNRSSKGFYIE-----HKVIRCTMAGLIPF-----STHLVICI--LLVKSTVVM*CL 83
CN SS + + +V T+ GLIP HL CI +KS +V
Sbjct: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
Query: 82 VLLSTALTTVYWWLHEIQLSRKLFDES 2
VL TAL+TVY L+E++ +RKLFDES
Sbjct: 348 VL--TALSTVYSRLNEMEAARKLFDES 372
>ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citrus clementina]
gi|557556782|gb|ESR66796.1| hypothetical protein
CICLE_v10007511mg [Citrus clementina]
Length = 784
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 9/47 (19%)
Frame = -1
Query: 330 MKVGRHSHEHVLTGMVSLYSNCGGL---------IMKLDLVAYNAMI 217
+K+G H H +VLTG+VS YS CG + I++ DL++ NAMI
Sbjct: 237 LKLGFHDHVYVLTGLVSFYSKCGEVEGAELLFRDIVRPDLISCNAMI 283
Score = 41.2 bits (95), Expect(2) = 1e-07
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 CNDSNRSSKGFYIE-----HKVIRCTMAGLIPF-----STHLVICI--LLVKSTVVM*CL 83
CN SS + + +V T+ GLIP HL CI +KS +V
Sbjct: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHNFCLKSGIVSNSS 347
Query: 82 VLLSTALTTVYWWLHEIQLSRKLFDES 2
VL TAL+TVY L+E++ +RKLFDES
Sbjct: 348 VL--TALSTVYSRLNEMEAARKLFDES 372
>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 783
Score = 41.6 bits (96), Expect(3) = 2e-07
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCGGL---------IMKLDLVAYNAMI 217
A+K+G ++VLTG++SLYS CG + I + DL+AYNAMI
Sbjct: 235 ALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMI 282
Score = 37.0 bits (84), Expect(3) = 2e-07
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Frame = -3
Query: 181 KVIRCTMAGLIPFST-----HLVICI--LLVKSTVVM*CLVLLSTALTTVYWWLHEIQLS 23
+V T+ GLIP + HL I VKS +++ V STA T +Y L+EI L+
Sbjct: 307 RVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTV--STAFTAIYNKLNEIDLA 364
Query: 22 RKLFDES 2
R LFDES
Sbjct: 365 RHLFDES 371
Score = 22.7 bits (47), Expect(3) = 2e-07
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N +I GLVK FD+SI+
Sbjct: 178 NTMINGLVKNCCFDDSIQ 195
>ref|XP_002309359.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855335|gb|EEE92882.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 605
Score = 40.8 bits (94), Expect(2) = 3e-06
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K G +SH +LTG++SL+S CG G I K DL++ NAMI
Sbjct: 57 AIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMI 104
Score = 37.0 bits (84), Expect(2) = 3e-06
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Frame = -3
Query: 226 CNDSNRSSKGFYIE-----HKVIRCTMAGLIPF-----STHLVICI--LLVKSTVVM*CL 83
CN S + E +V T+ GLIP ++L CI VK +V
Sbjct: 109 CNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSS 168
Query: 82 VLLSTALTTVYWWLHEIQLSRKLFDES 2
V STALTTVY L+E+ +R+LFDES
Sbjct: 169 V--STALTTVYCRLNEMIFARQLFDES 193
>gb|EOY31480.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 801
Score = 41.6 bits (96), Expect(2) = 7e-06
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCG---------GLIMKLDLVAYNAMI 217
A+K+G HSH +VLTG++SLYS G G I + DLV+ NAMI
Sbjct: 253 ALKLGFHSHVYVLTGLISLYSKGGEIEAAKLLFGEIGRPDLVSCNAMI 300
Score = 35.0 bits (79), Expect(2) = 7e-06
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Frame = -3
Query: 181 KVIRCTMAGLIPFST-----HLVICI--LLVKSTVVM*CLVLLSTALTTVYWWLHEIQLS 23
KV T+ GLIP + +L CI VK V V STALTT Y L+EI+ +
Sbjct: 325 KVNSSTIVGLIPVLSPFGYLNLTNCIHSFCVKYGFVSQSSV--STALTTAYSRLNEIESA 382
Query: 22 RKLFDES 2
R+LFDES
Sbjct: 383 RQLFDES 389
>ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526949|gb|EEF29150.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 575
Score = 41.2 bits (95), Expect(3) = 8e-06
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 9/48 (18%)
Frame = -1
Query: 333 AMKVGRHSHEHVLTGMVSLYSNCGGL---------IMKLDLVAYNAMI 217
A+K+G SH V+TG++SLYS CG + I + DL++YNAMI
Sbjct: 243 AIKLGFLSHISVVTGLISLYSKCGDVDTASILFTDIGRKDLISYNAMI 290
Score = 33.9 bits (76), Expect(3) = 8e-06
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -3
Query: 181 KVIRCTMAGLIPFSTH-----LVICI--LLVKSTVVM*CLVLLSTALTTVYWWLHEIQLS 23
KV ++ GLIP L CI VKS +V V +TALTTVY L+E++ +
Sbjct: 315 KVNSSSIVGLIPVYCPFGYLPLTNCIHGFGVKSGIVSHSSV--ATALTTVYSRLNEMEAA 372
Query: 22 RKLFDES 2
R+LFDES
Sbjct: 373 RQLFDES 379
Score = 20.4 bits (41), Expect(3) = 8e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 403 NAIICGLVKKIYFDESIR 350
N +I GLV+ +++SIR
Sbjct: 185 NTMISGLVRVCCYEDSIR 202