BLASTX nr result

ID: Rehmannia22_contig00015104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00015104
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subun...    56   6e-06

>ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
           communis] gi|223540927|gb|EEF42485.1| ATP-dependent Clp
           protease proteolytic subunit, putative [Ricinus
           communis]
          Length = 294

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/98 (40%), Positives = 48/98 (48%)
 Frame = -3

Query: 296 MDSLILSTPLTHHTLPVFRRPSLLQTPPPATVFLHAPKLLTPPLKCXXXXXXXXXXXXXX 117
           MD L+LS+PLT H+      PS   +  P T     P L++   K               
Sbjct: 1   MDMLLLSSPLTPHS----SSPSPSSSLKPTTAA--KPSLVSFNFKSPISSPHNKNFPSFS 54

Query: 116 XXXXXXXXXXXXSPQTPATAMRGAESDAMGLLLKERIV 3
                       +PQTPATAMRGAESDAMGLLL+ERIV
Sbjct: 55  IQSSGTLTPQFTAPQTPATAMRGAESDAMGLLLRERIV 92


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