BLASTX nr result

ID: Rehmannia22_contig00015054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00015054
         (544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    79   7e-13
emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]    75   8e-12
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...    74   2e-11
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]    71   2e-10
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    68   2e-09
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         68   2e-09
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar...    67   2e-09
emb|CAN71688.1| hypothetical protein VITISV_015290 [Vitis vinifera]    67   2e-09
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...    67   3e-09
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    66   5e-09
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               66   6e-09
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               66   6e-09
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    66   6e-09
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                     65   1e-08
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    65   1e-08
emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]    65   1e-08
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    65   1e-08
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    64   2e-08
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]         64   2e-08
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot...    64   3e-08

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 58/177 (32%), Positives = 78/177 (44%)
 Frame = +1

Query: 13   KTIISRDVLFNELEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSHIXXXXXXX 192
            K IISRDV FNE +      +  + V   D    EVE   + P       S         
Sbjct: 663  KCIISRDVTFNEQDMS--KQTPAKDVEGLDQLQFEVEHETLQPEKSKETSSKT------- 713

Query: 193  XXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNK 372
                        Q + VH+          +NEP       L  Y L RDR +R V+ P +
Sbjct: 714  -----------AQEEIVHER---------QNEPTQG----LESYNLVRDRQKRQVKPPKR 749

Query: 373  FADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            +    MT++  SV E I   EPKT+ EA+NS E+ +W+ A+ E+M SL  N TW LV
Sbjct: 750  YGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELV 806


>emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]
          Length = 992

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
 Frame = +1

Query: 214  IEDDTQHDNVHDMHNEFPDVNTENEPVA-DNHDE----LNDYVLTRDRTRRHVRVPNKFA 378
            ++ D +H+ +    +      T  E +  +  DE    L  Y L RDR +R V+ P ++ 
Sbjct: 860  LQFDVEHETLQPKKSTETSSKTVQEKIVYERQDEPTQGLESYSLARDRQKRQVKPPKRYG 919

Query: 379  DFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
               MT++  SV E I   EPKT  EA+NS E+ +W+  + EKM SL  N TW LV
Sbjct: 920  QAEMTTFALSVAEEIVDMEPKTNQEAINSDEANQWVKVIQEKMDSLRKNETWELV 974


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 2/179 (1%)
 Frame = +1

Query: 13  KTIISRDVLFNELEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSH--IXXXXX 186
           K +ISR+V+F E      ++    +V + D              I    D+H  I     
Sbjct: 391 KCVISRNVIFQEEVVYKDLNDKETVVKKED--------------IRTQTDNHLVISKTKE 436

Query: 187 XXXXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVP 366
                   HIE+  + D   +     P+   E +P  ++   L +Y L +DR RR +  P
Sbjct: 437 VSDQGGVTHIEECEESDENDEQE---PETVNETDPTVESEGSLANYQLAKDRVRRQINPP 493

Query: 367 NKFADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            +F +    ++   V ES+   EP+++ EA    E  KW +A HE+M SL  N TW LV
Sbjct: 494 ARFTEESGVAFALVVVESLSLEEPESYQEATQDKEWLKWKNATHEEMDSLIKNGTWDLV 552


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
 Frame = +1

Query: 271 VNTENEPVADNHDE--------LNDYVLTRDRTRRHVRVPNKFADFHMTSYVFSVFESID 426
           +N EN  V D  +         L +Y LTRD  RR +R P +F    M +Y  S+ E + 
Sbjct: 395 INKENGEVKDKFETKPQQYDIPLENYQLTRDGARRSIRPPQRFGYNDMVAYSLSIGEELS 454

Query: 427 GSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            +EPK + EA++  +S KW++AM E+  SL  N TW LV
Sbjct: 455 CAEPKNYLEAISCKDSPKWMTAMQEEFESLLKNGTWQLV 493


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 2/179 (1%)
 Frame = +1

Query: 13   KTIISRDVLFNELEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSHIXXXXXXX 192
            K ++SRD++F E +   +       +SE D    EVE + +    +   D +        
Sbjct: 696  KCVVSRDIVFQENQM--YKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSEGG--- 750

Query: 193  XXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNK 372
                     D++  +      +   D   E     D  D L +Y+L RDR RR +R P +
Sbjct: 751  ---------DNSNQEQASTTRSASKDKQVEETDSDD--DCLENYLLARDRIRRQIRAPQR 799

Query: 373  FA--DFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            F   D  +  +  ++ E  +  EP+T+ EAM S E  KW  A  E+M S+  N+TW ++
Sbjct: 800  FVEEDDSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVI 858


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 43/78 (55%)
 Frame = +1

Query: 310  ELNDYVLTRDRTRRHVRVPNKFADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLS 489
            +L +Y L RDR RR VR P ++    + +Y     + +   EP  FSEAM S    KWL 
Sbjct: 772  DLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANFSEAMESVHCDKWLE 831

Query: 490  AMHEKMTSLHVNNTWILV 543
            AM ++M SL  N TW L+
Sbjct: 832  AMQDEMESLQRNQTWTLI 849


>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 348

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = +1

Query: 283 NEPV--ADNHDELNDYVLTRDRTRR-HVRVPNKFADFHMTSYVFSVFESIDGSEPKTFSE 453
           NE V  ++N   L+DY+L R+R RR ++R P++F D    +Y  +  E ++  EPK++ E
Sbjct: 151 NEEVDGSENEQSLDDYLLARERKRRSNIRPPSRFKDGDFVAYALATEEDLEIEEPKSYEE 210

Query: 454 AMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
           AM  ++  +W SAM E+M S   ++TW L+
Sbjct: 211 AMKRSKRKQWESAMKEEMDSHQKSHTWDLI 240


>emb|CAN71688.1| hypothetical protein VITISV_015290 [Vitis vinifera]
          Length = 259

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/82 (36%), Positives = 50/82 (60%)
 Frame = +1

Query: 298 DNHDELNDYVLTRDRTRRHVRVPNKFADFHMTSYVFSVFESIDGSEPKTFSEAMNSAEST 477
           +N  +   Y L RDR  R ++ P +++     +Y FSV ++I+  EP+T+ E + + EST
Sbjct: 146 ENTPQEQQYCLARDRIMRQIKPPQRYSYVDSVAYAFSVAKNIEKEEPQTYHETITNREST 205

Query: 478 KWLSAMHEKMTSLHVNNTWILV 543
           +W+  M+E++ SL  N TW LV
Sbjct: 206 QWIITMNEEIESLQKNLTWQLV 227


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = +1

Query: 283 NEPV--ADNHDELNDYVLTRDRTRR-HVRVPNKFADFHMTSYVFSVFESIDGSEPKTFSE 453
           NE V  ++N   L+DY+L RD  RR ++R P++F D    +Y  +  E ++  EPK++ E
Sbjct: 679 NEEVVGSENEQSLDDYLLARDMKRRSNIRPPSRFEDEDFVAYALATAEDLEEEEPKSYEE 738

Query: 454 AMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
           A+ S++  +W +AM E+M S   ++TW L+
Sbjct: 739 ALKSSKRKQWENAMKEEMDSHKKSHTWDLI 768


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 328 LTRDRTRR-HVRVPNKFADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEK 504
           + +DR RR  VR P ++    M  Y   V E +D SEP T+ EA+ S++S KW +AM ++
Sbjct: 754 IAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDE 813

Query: 505 MTSLHVNNTWILV 543
           M SLH N TW LV
Sbjct: 814 MESLHKNQTWDLV 826


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 51/177 (28%), Positives = 83/177 (46%)
 Frame = +1

Query: 13   KTIISRDVLFNELEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSHIXXXXXXX 192
            K ++SRDV+F E E         Q   +ND+T  E  +  +                   
Sbjct: 695  KVVVSRDVVFAENEL--------QSEQKNDSTSKETAIVQMEEK---------------- 730

Query: 193  XXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNK 372
                     D ++ ++VH+          E EP     D++ND V    R+ R  + P+ 
Sbjct: 731  -----SKESDSSEAESVHE----------EQEP-----DDVNDGVR---RSTRQTQKPSW 767

Query: 373  FADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
             +D+ MTS+      + +G EP TF EA+N +++++W++AMHE+M +LH N TW LV
Sbjct: 768  QSDYVMTSHDAYCLITEEG-EPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELV 823


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 51/177 (28%), Positives = 83/177 (46%)
 Frame = +1

Query: 13   KTIISRDVLFNELEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSHIXXXXXXX 192
            K ++SRDV+F E E         Q   +ND+T  E  +  +                   
Sbjct: 695  KVVVSRDVVFAENEL--------QSEQKNDSTSKETAIVQMEEK---------------- 730

Query: 193  XXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNK 372
                     D ++ ++VH+          E EP     D++ND V    R+ R  + P+ 
Sbjct: 731  -----SKESDSSEAESVHE----------EQEP-----DDVNDGVR---RSTRQTQKPSW 767

Query: 373  FADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
             +D+ MTS+      + +G EP TF EA+N +++++W++AMHE+M +LH N TW LV
Sbjct: 768  QSDYVMTSHDAYCLITEEG-EPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELV 823


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
 Frame = +1

Query: 13   KTIISRDVLFNE-LEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSHIXXXXXX 189
            K +ISR+V+F E + F      S   +SE+D     +E   V+P++    +         
Sbjct: 685  KCVISRNVIFREQVMFKDLKGDSQNTISESD-----LEDLRVNPDM----NDQEFTDQGG 735

Query: 190  XXXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPN 369
                     E  T H+ V +      D  +E E  +D  ++L+ Y L RDR RR ++   
Sbjct: 736  ATQDNSNPSEATTSHNPVLNSPTHSQDEESEEED-SDAVEDLSTYQLVRDRVRRTIKANP 794

Query: 370  KFADFHMTSYVFSVFESIDGS-EPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            K+ + +M  + +  +   DG  EPK++ EA+   +  KW +AM E+M S+  N+TW LV
Sbjct: 795  KYNESNMVGFAY--YSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLV 851


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 47/177 (26%), Positives = 78/177 (44%)
 Frame = +1

Query: 13   KTIISRDVLFNELEFPCFVHSSPQIVSENDNTPNEVELSNVSPNIVVPADSHIXXXXXXX 192
            K +ISR+VLF+E           ++V       +E E ++ S + ++   +         
Sbjct: 718  KCVISRNVLFHEESVYKDTMKKERVVE------SEAEPASHSKSTLIKVKT-----PGNL 766

Query: 193  XXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNK 372
                   + D+ + D   +   E P+   E  P       L +Y L RDR RR +  P +
Sbjct: 767  NSGEVIQVSDEEESDESVEEEQE-PETQVEL-PETQTTSSLANYQLARDRERRQIHPPAR 824

Query: 373  FADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            F +    ++     E++   EP+++ EA +  E  KW  A HE+M SL  N TW+LV
Sbjct: 825  FTEESGVAFALVTVETLSMEEPQSYQEATSDKEWKKWKLATHEEMDSLIKNGTWVLV 881


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = +1

Query: 268  DVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNKFADF------HMTSYVFSVFESIDG 429
            D  +E +PV D +D  +   +   R RR +R P ++ D       +  ++  +V E I  
Sbjct: 855  DDTSEEQPVIDQNDSQS---IAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGR 911

Query: 430  SEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
             EP+++ EAM S +S KWLS+M ++M SL  N TW LV
Sbjct: 912  EEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELV 949


>emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]
          Length = 807

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
 Frame = +1

Query: 238 NVHDMHNEFP--DVNTENEPVAD-NHDELNDYVLTR--DRTRRHVRVPNKFADFHMTSYV 402
           N  DM  + P  DV   N+   +  H+ L     T      +R V+ P ++    MT++ 
Sbjct: 460 NEQDMPKQTPAKDVEGSNQLQFEVEHETLQPEKSTETIQEEKRQVKPPKRYGQAKMTTFA 519

Query: 403 FSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
            SV E I   EPKT+ EA+NS E+ +W+ ++ EKM SL  N TW LV
Sbjct: 520 LSVAEEIVDMEPKTYQEAINSNEADQWVKSIQEKMDSLRKNETWELV 566


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = +1

Query: 268  DVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNKFADF------HMTSYVFSVFESIDG 429
            D  +E +PV D +D  +   +   R RR +R P ++ D       +  ++  +V E I  
Sbjct: 1068 DDTSEEQPVIDQNDSQS---IAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGR 1124

Query: 430  SEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
             EP+++ EAM S +S KWLS+M ++M SL  N TW LV
Sbjct: 1125 EEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELV 1162


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
 Frame = +1

Query: 280  ENEPVADNHDE-----LNDYV--------LTRDRTRRHVRVPNKFAD-FHMTSYVFSVFE 417
            E E VA N DE      N  +        + +DR +R+++ P ++ +  ++ +Y  SV E
Sbjct: 956  EKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNIKPPQRYIEEANIVAYALSVAE 1015

Query: 418  SIDGS-EPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
             I+G+ EP T+SEA+ S +  +W++AMH++M SL  N+TW LV
Sbjct: 1016 EIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELV 1058


>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
          Length = 494

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/108 (33%), Positives = 54/108 (50%)
 Frame = +1

Query: 220 DDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTRRHVRVPNKFADFHMTSY 399
           D+ + D   D   E P+   E  P       L +Y L RDR RR +  P +F +    ++
Sbjct: 1   DEEESDESVDEEQE-PEPQVEL-PETQTTSSLANYQLARDRERRQIHPPARFTEESGVAF 58

Query: 400 VFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNNTWILV 543
                E++   EP+++ EA ++ E  KW  A HE+M SL  N TW+LV
Sbjct: 59  ALVTVETLSMEEPQSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLV 106


>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
            (strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
            unnamed protein product [Arabidopsis thaliana]
          Length = 1084

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
 Frame = +1

Query: 13   KTIISRDVLFNE-------LEFPCFVHSSPQIVSENDNTPNEVEL-SNVSPNIVVPADSH 168
            K +ISR+VLF+E       +E    V S  +  S + +T  +++   N++   V+     
Sbjct: 618  KCVISRNVLFHEELVYKDTIEKERVVESEAEPASHSKSTLIKMKTPGNLNSGGVI----- 672

Query: 169  IXXXXXXXXXXXXXHIEDDTQHDNVHDMHNEFPDVNTENEPVADNHDELNDYVLTRDRTR 348
                           + D+ + D   D   E P+   E  P       L +Y L RDR R
Sbjct: 673  --------------QVSDEEESDESVDEEQE-PEPQVEL-PETQTTSSLANYQLVRDRER 716

Query: 349  RHVRVPNKFADFHMTSYVFSVFESIDGSEPKTFSEAMNSAESTKWLSAMHEKMTSLHVNN 528
            R +  P +F +    ++     E++   EP+++ EA +  E  KW  A HE+  SL  N 
Sbjct: 717  RQIHPPARFTEESGVAFALVTVETLSMEEPQSYQEATSDKEWKKWKLATHEEKNSLIKNG 776

Query: 529  TWILV 543
            TW+LV
Sbjct: 777  TWVLV 781


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