BLASTX nr result
ID: Rehmannia22_contig00014730
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00014730
(529 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Sol... 79 8e-13
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol... 79 8e-13
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol... 79 8e-13
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope... 75 1e-11
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 74 3e-11
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 74 3e-11
gb|EOY32048.1| DNA ligase IV [Theobroma cacao] 68 1e-09
gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus pe... 67 2e-09
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly... 67 3e-09
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly... 67 3e-09
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly... 67 3e-09
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 67 3e-09
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 67 3e-09
ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca... 63 4e-08
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 61 2e-07
ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 60 2e-07
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 59 7e-07
ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Caps... 59 9e-07
gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus... 57 3e-06
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4... 57 3e-06
>ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Solanum tuberosum]
Length = 1119
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 GQRFDEINEVGYGQGTSTQYKDR---LEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXX 171
G+R DE E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1031 GERLDEAYETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTL---- 1086
Query: 172 XXXXXXXALGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 294
+ + K D P KKKKVSYKDVA ELLKDW
Sbjct: 1087 --------VKDDKPEADTNPSPKKKKKVSYKDVAGELLKDW 1119
>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
Length = 1171
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 GQRFDEINEVGYGQGTSTQYKDR---LEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXX 171
G+R DE E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1083 GERLDEAYETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTL---- 1138
Query: 172 XXXXXXXALGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 294
+ + K D P KKKKVSYKDVA ELLKDW
Sbjct: 1139 --------VKDDKPEADTNPSPKKKKKVSYKDVAGELLKDW 1171
>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
Length = 1172
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 GQRFDEINEVGYGQGTSTQYKDR---LEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXX 171
G+R DE E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1084 GERLDEAYETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTL---- 1139
Query: 172 XXXXXXXALGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 294
+ + K D P KKKKVSYKDVA ELLKDW
Sbjct: 1140 --------VKDDKPEADTNPSPKKKKKVSYKDVAGELLKDW 1172
>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
Length = 1172
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +1
Query: 4 QRFDEINEVGYGQGTSTQYKDR----LEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXX 171
+R D+ +E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1084 ERLDKAHETSYGSGNIARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSIDTL---- 1139
Query: 172 XXXXXXXALGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 294
+ + K D P KKKK+SYKDVA ELLKDW
Sbjct: 1140 --------VKDDKPDADTNPSPKKKKKISYKDVAGELLKDW 1172
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +1
Query: 64 DRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLPLDAGTQPVK 243
++LE +DP+QAMLL+M+PSL KK ES + + K P++ G +PVK
Sbjct: 1099 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPI------------IDDEKPPVEQGAEPVK 1146
Query: 244 KKKVSYKDVANELLKDW 294
KKKVSYKDVA LLKDW
Sbjct: 1147 KKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +1
Query: 64 DRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLPLDAGTQPVK 243
++LE +DP+QAMLL+M+PSL KK ES + + K P++ G +PVK
Sbjct: 1098 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPI------------IDDEKPPVEQGAEPVK 1145
Query: 244 KKKVSYKDVANELLKDW 294
KKKVSYKDVA LLKDW
Sbjct: 1146 KKKVSYKDVAGALLKDW 1162
>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
Length = 1195
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = +1
Query: 64 DRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXA----LGEGKLPLDAGT 231
++LE +DP+QAMLL+M+PSL K VE+ A + + KL D
Sbjct: 1115 EKLEVMVDPVQAMLLDMIPSLGIKHVEATNSFVENEKPPADNNAEIPVVEDYKLDADFIA 1174
Query: 232 QPVKKKKVSYKDVANELLKDW 294
PVKKKKVSYKDVA ELLKDW
Sbjct: 1175 PPVKKKKVSYKDVAGELLKDW 1195
>gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = +1
Query: 64 DRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLPLDAGTQPVK 243
++LE DP+QAML +M+PSLA KKVE+ ++ + K +D P K
Sbjct: 659 EKLEVMADPVQAMLFDMIPSLAMKKVETTNT------------SIEKEKPAVDLNAGPSK 706
Query: 244 KKKVSYKDVANELLKDW 294
KKKVSYKDVA ELLKDW
Sbjct: 707 KKKVSYKDVAGELLKDW 723
>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
Length = 939
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 49 STQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLP---- 216
+ + ++LE + DP+QAML +M+PSLAT+KVE ++ E KLP
Sbjct: 865 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ-----------PMNRSVREEKLPETSN 913
Query: 217 LDAGTQPVKKKKVSYKDVANELLKDW 294
+A KKKKVSYKDVA+ELLKDW
Sbjct: 914 AEAEPMTTKKKKVSYKDVASELLKDW 939
>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
Length = 955
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 49 STQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLP---- 216
+ + ++LE + DP+QAML +M+PSLAT+KVE ++ E KLP
Sbjct: 881 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ-----------PMNRSVREEKLPETSN 929
Query: 217 LDAGTQPVKKKKVSYKDVANELLKDW 294
+A KKKKVSYKDVA+ELLKDW
Sbjct: 930 AEAEPMTTKKKKVSYKDVASELLKDW 955
>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
Length = 1011
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 49 STQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLP---- 216
+ + ++LE + DP+QAML +M+PSLAT+KVE ++ E KLP
Sbjct: 937 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ-----------PMNRSVREEKLPETSN 985
Query: 217 LDAGTQPVKKKKVSYKDVANELLKDW 294
+A KKKKVSYKDVA+ELLKDW
Sbjct: 986 AEAEPMTTKKKKVSYKDVASELLKDW 1011
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 49 STQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLP---- 216
+ + ++LE + DP+QAML +M+PSLAT+KVE ++ E KLP
Sbjct: 1030 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ-----------PMNRSVREEKLPETSN 1078
Query: 217 LDAGTQPVKKKKVSYKDVANELLKDW 294
+A KKKKVSYKDVA+ELLKDW
Sbjct: 1079 AEAEPMTTKKKKVSYKDVASELLKDW 1104
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 49 STQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLP---- 216
+ + ++LE + DP+QAML +M+PSLAT+KVE ++ E KLP
Sbjct: 1097 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ-----------PMNRSVREEKLPETSN 1145
Query: 217 LDAGTQPVKKKKVSYKDVANELLKDW 294
+A KKKKVSYKDVA+ELLKDW
Sbjct: 1146 AEAEPMTTKKKKVSYKDVASELLKDW 1171
>ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca subsp. vesca]
Length = 1188
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Frame = +1
Query: 7 RFDEINEVGYGQGTSTQYKDRLEDTLDPIQAMLLNMVPSLATKK--------------VE 144
+F EI + K++LE DP+QAMLL ++PSL TK V+
Sbjct: 1079 KFPEIEMIEKHNSQDQDNKEKLEVNDDPVQAMLLGLIPSLGTKNAQTMKMSIESEKPPVD 1138
Query: 145 SAXXXXXXXXXXXXXXALGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 294
+ + K P D +P KKKKVSYKD+A++LLKDW
Sbjct: 1139 LIPSHGKKNVQTTSHTSAEDDKPPCDIVAEPTKKKKVSYKDLASQLLKDW 1188
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 64 DRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLPL-DAGTQPV 240
D+LE +DPI AMLL+M+PSL + VE + E + P D QPV
Sbjct: 188 DKLEIMVDPIHAMLLDMIPSLGVRNVEISNQVF-------------EREKPAGDPTAQPV 234
Query: 241 KKKKVSYKDVANELLKD 291
KKKKVSYKDVA+E+LKD
Sbjct: 235 KKKKVSYKDVASEMLKD 251
>ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like [Setaria
italica]
Length = 1241
Score = 60.5 bits (145), Expect = 2e-07
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Frame = +1
Query: 46 TSTQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGK----- 210
TS+ +++E +DP+ AMLL+M+P+L+ + E A +G
Sbjct: 1142 TSSVPGEKIEQMVDPLHAMLLDMIPTLSQTRTEGASRVPPPTIVEKAPPGVGSNTSKSSD 1201
Query: 211 -LPLDAGTQ-----------PVKKKKVSYKDVANELLKDW 294
L DAGT P KKKKVSYKDVA+ELLKDW
Sbjct: 1202 ILVPDAGTSGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1241
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +1
Query: 16 EINEVGYGQGTSTQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXA 195
E+N+V + ++ ++LE DP+QAMLL+M+PSLAT+KVE
Sbjct: 1087 EMNDVHNDE--NSHVTEKLEILTDPVQAMLLDMIPSLATEKVEQPLNSY----------- 1133
Query: 196 LGEGKLPLDAGTQP--VKKKKVSYKDVANELLKDW 294
+ E K P + +P KKKKVS+K +A +LLKDW
Sbjct: 1134 VEEEKPPEISNEEPSTSKKKKVSFKAIAGDLLKDW 1168
>ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Capsella rubella]
gi|482550899|gb|EOA15093.1| hypothetical protein
CARUB_v10028461mg [Capsella rubella]
Length = 1203
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Frame = +1
Query: 19 INEVGYGQGTSTQYKDRLEDTLDPIQAMLLNMVPSLATKKVE----------SAXXXXXX 168
+ E + T K++L+ DP+QAML+NM+PSL+ K E +A
Sbjct: 1096 VEEASRNEKTDMDMKEKLQIHEDPLQAMLMNMIPSLSQKNTETSNRITGENRTADVYGDC 1155
Query: 169 XXXXXXXXALGEGKLPLDAGTQ------PVKKKKVSYKDVANELLKDW 294
P+ A + PVKKKKVSY+DVA LLKDW
Sbjct: 1156 ESSEKRKLGAETDNTPVTADAEADTVPPPVKKKKVSYRDVAGALLKDW 1203
>gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus vulgaris]
Length = 1172
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +1
Query: 31 GYGQGTSTQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGK 210
G+ + ++LE + DP+QAML +M+PSL KK E ++ E K
Sbjct: 1092 GHNNDQNNVVIEKLEFSADPLQAMLFDMIPSLGPKKAEQ-----------PMNLSVREEK 1140
Query: 211 LP--LDAGTQP--VKKKKVSYKDVANELLKDW 294
+P +A T+P KK KVS+ D AN+LLKDW
Sbjct: 1141 VPEASNAATEPTTTKKNKVSFMDAANDLLKDW 1172
>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/82 (41%), Positives = 44/82 (53%)
Frame = +1
Query: 49 STQYKDRLEDTLDPIQAMLLNMVPSLATKKVESAXXXXXXXXXXXXXXALGEGKLPLDAG 228
S + ++LE DP++AMLL+MVPSL +S+ + E K P
Sbjct: 843 SVEKPEKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSS------TVVEEKKPFVEN 896
Query: 229 TQPVKKKKVSYKDVANELLKDW 294
KKKVSYKDVA+ELLKDW
Sbjct: 897 KSEAVKKKVSYKDVASELLKDW 918