BLASTX nr result
ID: Rehmannia22_contig00014666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00014666
(1729 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ01283.1| hypothetical protein PRUPE_ppa021080mg, partial [... 74 5e-25
ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containi... 79 2e-23
emb|CBI18900.3| unnamed protein product [Vitis vinifera] 79 2e-23
ref|XP_002510616.1| pentatricopeptide repeat-containing protein,... 71 4e-23
emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera] 78 2e-22
gb|EOY15161.1| Tetratricopeptide repeat (TPR)-like superfamily p... 70 4e-22
ref|XP_002301939.2| hypothetical protein POPTR_0002s01620g [Popu... 70 2e-21
ref|XP_004292394.1| PREDICTED: pentatricopeptide repeat-containi... 67 4e-21
ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containi... 72 3e-20
ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containi... 72 4e-20
gb|ESW21043.1| hypothetical protein PHAVU_005G036500g [Phaseolus... 72 9e-20
ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-17
ref|XP_004514842.1| PREDICTED: pentatricopeptide repeat-containi... 76 1e-15
ref|XP_003599110.1| Pentatricopeptide repeat-containing protein ... 68 2e-15
ref|XP_006283350.1| hypothetical protein CARUB_v10004394mg [Caps... 63 8e-15
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t... 47 5e-14
ref|XP_006405495.1| hypothetical protein EUTSA_v10027699mg [Eutr... 60 6e-14
ref|NP_198857.2| pentatricopeptide repeat-containing protein [Ar... 63 1e-13
gb|ESW24714.1| hypothetical protein PHAVU_004G153700g [Phaseolus... 44 2e-12
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 50 3e-12
>gb|EMJ01283.1| hypothetical protein PRUPE_ppa021080mg, partial [Prunus persica]
Length = 564
Score = 73.9 bits (180), Expect(2) = 5e-25
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IH+ VIKS N DGF GD++ S YT+LG ++ LFDEMPNKDL+S NSLISGF
Sbjct: 9 RAIHSCVIKSFNYTDGFIGDQLVSCYTRLGRADDARNLFDEMPNKDLISWNSLISGF 65
Score = 69.3 bits (168), Expect(2) = 5e-25
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-NIF 550
F R+G + K LD F + +FEMG+ P+EVTLI++ SAC GA G YIHG ++K +
Sbjct: 65 FSRRGYVDKCLDAFFRMKFEMGIEPDEVTLISIT-SACASRGAVDEGKYIHGFALKLGVL 123
Query: 551 DE*K*LANSLINLYGKSG 604
E K L NSLINLYGKSG
Sbjct: 124 WEVK-LVNSLINLYGKSG 140
>ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 79.3 bits (194), Expect(2) = 2e-23
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 208 IHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISG 369
IHARVIKSLN DGF GDR+ S+Y KLG +Q+LFDEMPNKDLVS NSL+SG
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSG 194
Score = 58.9 bits (141), Expect(2) = 2e-23
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +2
Query: 383 KGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K 562
+G L L+ F + R E G PNEVTL++V+ SAC D+GA G +HG+ VK
Sbjct: 198 RGYLGACLNAFCRMRTESGRQPNEVTLLSVV-SACADMGALDEGKSLHGVVVKLGMSGKA 256
Query: 563 *LANSLINLYGKSG-LD*AKRLF 628
+ NSLIN+YGK G LD A +LF
Sbjct: 257 KVVNSLINMYGKLGFLDAASQLF 279
Score = 45.4 bits (106), Expect(2) = 8e-07
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Frame = +2
Query: 386 GELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K* 565
G K +DLFN + G+ P++ T++A+L ACTD G + IH + F+
Sbjct: 301 GYAEKGMDLFNLMK-RAGINPDQATMVALL-RACTDTGLGRQAESIHAYIHRCGFNADII 358
Query: 566 LANSLINLYGKSGLD*AKRLFSVYAKNERLDVLNALFVGMKDPDKNS----MAVVDTHLC 733
+A +L+NLY AK RL+ +F +KD D+ + +A H C
Sbjct: 359 IATALLNLY---------------AKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 403
Query: 734 ---------VLIPWLREV----*THLLSACSH 790
+++ EV THLLSACSH
Sbjct: 404 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 435
Score = 36.2 bits (82), Expect(2) = 8e-07
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLI 363
K++H V+K + + ++Y KLG ++ +LF+EMP + LVS NS++
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV 294
>emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 79.3 bits (194), Expect(2) = 2e-23
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 208 IHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISG 369
IHARVIKSLN DGF GDR+ S+Y KLG +Q+LFDEMPNKDLVS NSL+SG
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSG 137
Score = 58.9 bits (141), Expect(2) = 2e-23
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +2
Query: 383 KGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K 562
+G L L+ F + R E G PNEVTL++V+ SAC D+GA G +HG+ VK
Sbjct: 141 RGYLGACLNAFCRMRTESGRQPNEVTLLSVV-SACADMGALDEGKSLHGVVVKLGMSGKA 199
Query: 563 *LANSLINLYGKSG-LD*AKRLF 628
+ NSLIN+YGK G LD A +LF
Sbjct: 200 KVVNSLINMYGKLGFLDAASQLF 222
Score = 45.4 bits (106), Expect(2) = 8e-07
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Frame = +2
Query: 386 GELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K* 565
G K +DLFN + G+ P++ T++A+L ACTD G + IH + F+
Sbjct: 244 GYAEKGMDLFNLMK-RAGINPDQATMVALL-RACTDTGLGRQAESIHAYIHRCGFNADII 301
Query: 566 LANSLINLYGKSGLD*AKRLFSVYAKNERLDVLNALFVGMKDPDKNS----MAVVDTHLC 733
+A +L+NLY AK RL+ +F +KD D+ + +A H C
Sbjct: 302 IATALLNLY---------------AKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346
Query: 734 ---------VLIPWLREV----*THLLSACSH 790
+++ EV THLLSACSH
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 378
Score = 36.2 bits (82), Expect(2) = 8e-07
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLI 363
K++H V+K + + ++Y KLG ++ +LF+EMP + LVS NS++
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV 237
>ref|XP_002510616.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551317|gb|EEF52803.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 390
Score = 70.9 bits (172), Expect(2) = 4e-23
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +1
Query: 208 IHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+H+RVIKSL+ GF GD+ S Y +LG T +Q LFDE+P KDLVS NSLISGF
Sbjct: 65 LHSRVIKSLSYNHGFVGDQFVSAYVRLGCTKDAQNLFDELPEKDLVSWNSLISGF 119
Score = 66.2 bits (160), Expect(2) = 4e-23
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-NIF 550
F R+G+L L++F+K +++ L PNEVT I+ L SACTD GA G Y+HG +VK
Sbjct: 119 FSRRGDLDNCLNVFSKMKYQTILKPNEVTFIS-LISACTDAGALGMGKYVHGFAVKLGTI 177
Query: 551 DE*K*LANSLINLYGKSG-LD*AKRLF 628
E K + N+LI LYGKSG LD A R+F
Sbjct: 178 LEVK-VVNALICLYGKSGCLDAACRIF 203
>emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 78.2 bits (191), Expect(2) = 2e-22
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1
Query: 208 IHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISG 369
IHARVIKSLN DGF GDR+ S+Y KLG +Q+LFDEMPN+DLVS NSL+SG
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSG 214
Score = 56.2 bits (134), Expect(2) = 2e-22
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +2
Query: 383 KGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K 562
+G L L+ F + R E G PNEVTL++V+ SAC +GA G +HG+ VK
Sbjct: 218 RGYLGACLNAFCRMRTESGRQPNEVTLLSVV-SACAXMGALDEGKSLHGVVVKLGMSGKA 276
Query: 563 *LANSLINLYGKSG-LD*AKRLF 628
+ NSLIN+YGK G LD A +LF
Sbjct: 277 KVVNSLINMYGKLGFLDAASQLF 299
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Frame = +2
Query: 386 GELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K* 565
G K +DLFN + G+ P++ T++A+L ACTD G + IH + F+
Sbjct: 321 GYAEKGMDLFNLMK-RAGINPDQATMVALL-RACTDTGLGRQAESIHAYIHRCGFNADII 378
Query: 566 LANSLINLYGKSGLD*AKRLFSVYAKNERLDVLNALFVGMKDPDKNS----MAVVDTHLC 733
+A +L+NLY AK RL+ +F +KD D + +A H C
Sbjct: 379 IATALLNLY---------------AKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHAC 423
Query: 734 ---------VLIPWLREV----*THLLSACSH 790
+++ EV THLLSACSH
Sbjct: 424 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 455
Score = 36.2 bits (82), Expect(2) = 2e-06
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLI 363
K++H V+K + + ++Y KLG ++ +LF+EMP + LVS NS++
Sbjct: 261 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMV 314
>gb|EOY15161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 626
Score = 70.5 bits (171), Expect(2) = 4e-22
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISG 369
+ HARVIK++N + GF GD++ S Y +LG +Q LFDEMPNKDLVS NSLISG
Sbjct: 71 QAFHARVIKAVNYRHGFVGDQLVSSYARLGYPEYAQNLFDEMPNKDLVSWNSLISG 126
Score = 63.2 bits (152), Expect(2) = 4e-22
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 380 RKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-NIFDE 556
R G K L F K RFEM + PN VT +++ FSAC+D GA G IHG ++K I +E
Sbjct: 129 RSGFTTKCLSAFCKMRFEMDMQPNYVTFLSI-FSACSDEGALSEGKCIHGFAMKLGILNE 187
Query: 557 *K*LANSLINLYGKSG 604
K + N+LIN+YGKSG
Sbjct: 188 VK-IVNALINMYGKSG 202
>ref|XP_002301939.2| hypothetical protein POPTR_0002s01620g [Populus trichocarpa]
gi|550344065|gb|EEE81212.2| hypothetical protein
POPTR_0002s01620g [Populus trichocarpa]
Length = 613
Score = 69.7 bits (169), Expect(2) = 2e-21
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ +H RVIKS+N GF GD++ S Y +LG T + +LFDE+P+KDLVS NSLISGF
Sbjct: 58 RALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGF 114
Score = 61.6 bits (148), Expect(2) = 2e-21
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFD 553
F R+ +L L L + RFEMGL PNEVT+I V+ SAC +G G IHG++VK+
Sbjct: 114 FSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVV-SACAGVGELDVGKCIHGIAVKSGML 172
Query: 554 E*K*LANSLINLYGKSGLD*AKRLFSVYAKNERLDVLNALFVGMKDPDK---NSMAVVDT 724
+ NSLINLYGK G L+ LF GM NSM V
Sbjct: 173 LEVKVVNSLINLYGKCGC---------------LEAACCLFEGMSVQSLVSWNSMVAVHV 217
Query: 725 HL 730
H+
Sbjct: 218 HM 219
>ref|XP_004292394.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 642
Score = 67.0 bits (162), Expect(2) = 4e-21
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IHA VIKS + DGF GD++ S Y K+G + LFDEMP +DLVS NSLISGF
Sbjct: 87 RAIHACVIKSYSYSDGFIGDQLVSCYAKMGSAEDALNLFDEMPKRDLVSWNSLISGF 143
Score = 63.2 bits (152), Expect(2) = 4e-21
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-NIF 550
F +G + K L+ + RFE+G+ PNEVTLI+V+ SAC GA G +IHG+++K +
Sbjct: 143 FSPRGYVEKCLNALFRMRFEVGIEPNEVTLISVV-SACASRGAVDEGMHIHGLALKLGLL 201
Query: 551 DE*K*LANSLINLYGKSG 604
E K L NSLINLYGKSG
Sbjct: 202 WEPK-LVNSLINLYGKSG 218
>ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 71.6 bits (174), Expect(2) = 3e-20
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IHARV KSL +DGF GD++ + Y KLG + KLFD+MP+KDLVS NSLISGF
Sbjct: 59 REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGF 115
Score = 55.5 bits (132), Expect(2) = 3e-20
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 401 SLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K*LANSL 580
SL F +FEM + PNEVT+++++ SAC+ GA G YIHG +K +ANSL
Sbjct: 122 SLTAFYTMKFEMSVKPNEVTILSMI-SACS--GALDAGKYIHGFGIKVGGTLEVKVANSL 178
Query: 581 INLYGKSG-LD*AKRLF 628
IN+YGKSG L A RLF
Sbjct: 179 INMYGKSGDLTSACRLF 195
>ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 71.6 bits (174), Expect(2) = 4e-20
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IHARV KSL +DGF GD++ + Y KLG + KLFD+MP+KDLVS NSLISGF
Sbjct: 59 REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGF 115
Score = 55.1 bits (131), Expect(2) = 4e-20
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 401 SLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE*K*LANSL 580
SL F +FEM + PNEVT+++++ SAC GA G YIHG +K +ANSL
Sbjct: 122 SLTAFYTMKFEMSVKPNEVTILSMI-SACN--GALDAGKYIHGFGIKVGGTLEVKVANSL 178
Query: 581 INLYGKSG-LD*AKRLF 628
IN+YGKSG L A RLF
Sbjct: 179 INMYGKSGDLTSACRLF 195
>gb|ESW21043.1| hypothetical protein PHAVU_005G036500g [Phaseolus vulgaris]
Length = 627
Score = 71.6 bits (174), Expect(2) = 9e-20
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IHA+V+KSLN +DGF GD++ S Y G +QKLFDEMP+KD VS NSL+SGF
Sbjct: 72 RVIHAQVVKSLNYRDGFIGDQLISCYLNKGSIPDAQKLFDEMPHKDSVSWNSLVSGF 128
Score = 53.9 bits (128), Expect(2) = 9e-20
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFD 553
F ++GEL L +F++ R E L NE+T+I+V+ SAC A GG ++H +VK +
Sbjct: 128 FSKRGELGNCLSVFSRMRSEEALELNELTVISVI-SACASAKARDGGSFLHCCAVKFGME 186
Query: 554 E*K*LANSLINLYGKSG-LD*AKRLF 628
+ N+LIN+YGK G +D A +LF
Sbjct: 187 LEVKVVNALINMYGKFGCVDSAFKLF 212
>ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 75.5 bits (184), Expect(2) = 1e-17
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IHARVIKSL+ +DGF GD++ S Y +G T +QKLFDEMP+KD +S NSL+SGF
Sbjct: 71 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGF 127
Score = 42.7 bits (99), Expect(2) = 1e-17
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFD 553
F R G+L L +F R+EM NE+TL++V+ SAC A G +H +VK +
Sbjct: 127 FSRIGDLGNCLRVFYTMRYEMAFEWNELTLLSVI-SACAFAKARDEGWCLHCCAVKLGME 185
Query: 554 E*K*LANSLINLYGKSG-LD*AKRLF 628
+ N+ IN+YGK G +D A +LF
Sbjct: 186 LEVKVVNAFINMYGKFGCVDSAFKLF 211
>ref|XP_004514842.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like isoform X1 [Cicer arietinum]
gi|502170490|ref|XP_004514843.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like isoform X2 [Cicer arietinum]
gi|502170494|ref|XP_004514844.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like isoform X3 [Cicer arietinum]
gi|502170498|ref|XP_004514845.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like isoform X4 [Cicer arietinum]
gi|502170502|ref|XP_004514846.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like isoform X5 [Cicer arietinum]
Length = 628
Score = 75.9 bits (185), Expect(2) = 1e-15
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
K IHA VIKSL+ +DGF GD++ S Y KLG T + LFDEMPNKD VS NSL+SGF
Sbjct: 70 KIIHAHVIKSLDYRDGFIGDQLVSCYLKLGATQDAHLLFDEMPNKDFVSWNSLVSGF 126
Score = 35.8 bits (81), Expect(2) = 1e-15
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +2
Query: 374 FLRKGELVKSLDLF--NKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-N 544
F + G+L L +F K+ E+ + NE+T I+V+ SAC A G Y+H VK
Sbjct: 126 FSKSGQLGCCLSVFCAMKSDSELDMRLNELTFISVI-SACVLAKAKDEGYYVHCCVVKLG 184
Query: 545 IFDE*K*LANSLINLYGKSG 604
+ E K + N+L+N+YGK G
Sbjct: 185 MVIEVK-VVNALVNMYGKFG 203
>ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 623
Score = 68.2 bits (165), Expect(2) = 2e-15
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISG 369
+ IHA VIKSL+ +DGF GD++ S Y K+G T + LFDEMP KD VS NSL+SG
Sbjct: 65 RIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSG 120
Score = 42.7 bits (99), Expect(2) = 2e-15
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +2
Query: 386 GELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-NIFDE*K 562
G+L + L +F K + + L NE T ++V+ SAC A G Y+H ++K + E K
Sbjct: 125 GQLGECLSVFCKMKSDSELKLNEFTFLSVI-SACVSEKACDEGYYVHCCAMKLGLVYEVK 183
Query: 563 *LANSLINLYGKSG-LD*AKRLFSVYAKNER 652
+ N+L+N+YGK G ++ A RLFS ++E+
Sbjct: 184 -VVNALVNMYGKFGFVESAFRLFSEMPESEK 213
>ref|XP_006283350.1| hypothetical protein CARUB_v10004394mg [Capsella rubella]
gi|482552055|gb|EOA16248.1| hypothetical protein
CARUB_v10004394mg [Capsella rubella]
Length = 613
Score = 62.8 bits (151), Expect(2) = 8e-15
Identities = 26/57 (45%), Positives = 44/57 (77%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+++H +++K+++ + GF GD++ Y +LG ++KLFDEMP++DLVS NSLISG+
Sbjct: 56 RSLHCKIVKNVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPDRDLVSWNSLISGY 112
Score = 46.2 bits (108), Expect(2) = 8e-15
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +2
Query: 383 KGELVKSLD-LFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKN-IFDE 556
+G L K + L R E+GL PNEVT ++++ SAC G+ G +HG+ +K+ + +E
Sbjct: 115 RGYLGKCFEVLLRMMRSEVGLRPNEVTCLSMI-SACVHGGSKEEGRCLHGLVMKSGVLEE 173
Query: 557 *K*LANSLINLYGKSG 604
K + N+LIN YGK+G
Sbjct: 174 VK-VVNALINWYGKTG 188
>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 541
Score = 47.4 bits (111), Expect(3) = 5e-14
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ IHA V+K D F G+ + SL+ GL+ +++K+FDEM +D+VS NS++ G+
Sbjct: 149 EVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGY 205
Score = 41.2 bits (95), Expect(3) = 5e-14
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +2
Query: 377 LRKGELVKSLDLFNKTRFEMG---LGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNI 547
++ G +SL++F++ +F G + P+++T+ +VL SAC +G+ G ++H KN
Sbjct: 237 VQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVL-SACALLGSIDHGKWVHAYLRKND 295
Query: 548 FDE*K*LANSLINLYGKSG 604
+ + +L+N+YGK G
Sbjct: 296 IECDVVIGTALVNMYGKCG 314
Score = 37.4 bits (85), Expect(3) = 5e-14
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1
Query: 706 HGCGRHALMCFDSMVKRGLN----TFVECL*P---FGLLKEEKRCFEIMLSVYKVGPRLD 864
HG G+ A CF M K G+ TFV L GL+++ + CF++M VY + P++
Sbjct: 344 HGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIY 403
Query: 865 RYS 873
Y+
Sbjct: 404 HYA 406
>ref|XP_006405495.1| hypothetical protein EUTSA_v10027699mg [Eutrema salsugineum]
gi|557106633|gb|ESQ46948.1| hypothetical protein
EUTSA_v10027699mg [Eutrema salsugineum]
Length = 579
Score = 60.5 bits (145), Expect(2) = 6e-14
Identities = 27/57 (47%), Positives = 41/57 (71%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ +H +V+K++ + GF GD++ Y +LG ++KLFDEMP +DLVS NSLISG+
Sbjct: 21 RLLHCKVVKTVIYRHGFIGDQLVGCYLRLGHEVCAEKLFDEMPERDLVSWNSLISGY 77
Score = 45.4 bits (106), Expect(2) = 6e-14
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLG--PNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKN- 544
+ R+G L K ++ R E+G G PNEVT +++L S C + G +HG+ +K+
Sbjct: 77 YSRRGYLGKCFKALSRMRSEVGFGFRPNEVTFLSIL-SVCVHERSREEGRCVHGLVMKSG 135
Query: 545 IFDE*K*LANSLINLYGKSG 604
+ +E K N+LIN YGK+G
Sbjct: 136 VLEEVK-AVNALINWYGKTG 154
>ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|30725418|gb|AAP37731.1|
At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 63.2 bits (152), Expect(2) = 1e-13
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
+ +H +V+KS++ + GF GD++ Y +LG ++KLFDEMP +DLVS NSLISG+
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGY 107
Score = 42.0 bits (97), Expect(2) = 1e-13
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 383 KGELVKSLDLFNKTRF-EMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVK-NIFDE 556
+G L K ++ ++ E+G PNEVT ++++ SAC G+ G IHG+ +K + +E
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMI-SACVYGGSKEEGRCIHGLVMKFGVLEE 168
Query: 557 *K*LANSLINLYGKSG 604
K + N+ IN YGK+G
Sbjct: 169 VK-VVNAFINWYGKTG 183
>gb|ESW24714.1| hypothetical protein PHAVU_004G153700g [Phaseolus vulgaris]
Length = 542
Score = 43.9 bits (102), Expect(3) = 2e-12
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 202 KTIHARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISG 369
+ IHA+VIK KD F G+ + +LY GL ++ +FDE+ D+V+ NS++ G
Sbjct: 148 QVIHAQVIKFGFLKDVFVGNSLINLYMACGLLSNASNMFDELLVTDVVTWNSMVIG 203
Score = 40.8 bits (94), Expect(3) = 2e-12
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +2
Query: 386 GELVKSLDLFNKTRF--EMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFDE* 559
G +SL+LF++ + + + P+++T+ +VL SAC+ +GA G ++HG +N +
Sbjct: 239 GRAKESLELFHEMQLLGDDMVKPDKITIASVL-SACSQLGAIDHGKWVHGYLKRNGIECD 297
Query: 560 K*LANSLINLYGKSGLD*AKRLFSVYAKNERLD 658
+ +L+N++GK G K+ F ++ + D
Sbjct: 298 VVIGTALVNMFGKCG--DVKKAFEIFKEMPEKD 328
Score = 35.4 bits (80), Expect(3) = 2e-12
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +1
Query: 706 HGCGRHALMCFDSMVKRGLN----TFVECL*PF---GLLKEEKRCFEIMLSVYKVGPRLD 864
HG G A CF M + G+ TFV L GL+++ + CFE+M VY + P++
Sbjct: 342 HGLGWKAFDCFLEMERAGVKPNHVTFVGLLSACAHSGLVEQGRWCFEVMKRVYSIEPQVY 401
Query: 865 RYS 873
Y+
Sbjct: 402 HYA 404
>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
protein product [Vitis vinifera]
Length = 618
Score = 50.4 bits (119), Expect(2) = 3e-12
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +1
Query: 211 HARVIKSLNCKDGFTGDRVASLYTKLGLTGSSQKLFDEMPNKDLVS*NSLISGF 372
H+ V+KS C DG + ++Y++ G G ++++FDE+ KDLVS NS+ISG+
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGY 202
Score = 49.7 bits (117), Expect(2) = 3e-12
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Frame = +2
Query: 374 FLRKGELVKSLDLFNKTRFEMGLGPNEVTLIAVLFSACTDIGA*YGGDYIHGMSVKNIFD 553
+ R G ++ LF + R + G P+E+TL+++L AC D+G G +I G V+N D
Sbjct: 202 YSRMGYAGDAVGLFGEMR-DAGFEPDEMTLVSIL-GACGDLGDLGLGSWIEGFVVENEMD 259
Query: 554 E*K*LANSLINLYGKSG-LD*AKRLF---------------SVYAKNERLDVLNALFVGM 685
+ ++LI +YGK G L A+R+F + YA+N D LF GM
Sbjct: 260 LNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGM 319
Query: 686 KD----PDKNSMAVV 718
++ PDK ++ V
Sbjct: 320 RESGVNPDKITLVGV 334