BLASTX nr result
ID: Rehmannia22_contig00014536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00014536
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEK78183.1| hypothetical chloroplast RF2 [Gisekia africana] 50 1e-09
gb|AEK71511.1| hypothetical chloroplast RF2 [Lythrum flagellare] 50 5e-09
ref|YP_005088849.1| Ycf2 (chloroplast) [Millettia pinnata] gi|37... 50 9e-09
gb|AEK71591.1| hypothetical chloroplast RF2 [Terminalia catappa] 50 1e-08
gb|ADB24086.1| Ycf2 [Cynomorium songaricum] 49 2e-08
ref|YP_004842281.1| hypothetical chloroplast RF2 [Pyrus pyrifoli... 49 2e-08
ref|YP_008965535.1| hypothetical chloroplast RF21 [Pyrus spinosa... 49 2e-08
gb|AEK71440.1| hypothetical chloroplast RF2 [Ceanothus prostratus] 49 2e-08
ref|NP_084839.1| Ycf2 [Lotus japonicus] gi|13518498|ref|NP_08485... 48 2e-08
gb|AFQ39506.1| putative chloroplast RF2 [Fragaria nilgerrensis] 49 2e-08
gb|AFQ39497.1| putative chloroplast RF2 [Fragaria viridis] 49 2e-08
gb|AFQ39461.1| putative chloroplast RF2 [Fragaria x ananassa sub... 49 2e-08
ref|XP_002523212.1| conserved hypothetical protein [Ricinus comm... 50 3e-08
gb|AGE93499.1| hypothetical chloroplast RF21 [Xiphidium caeruleu... 48 4e-08
gb|AEX93975.1| hypothetical chloroplast RF21 (chloroplast) [Iris... 48 4e-08
gb|AEZ48741.1| hypothetical chloroplast RF2, partial [Iris virgi... 48 4e-08
ref|YP_008082624.1| hypothetical chloroplast RF21 (chloroplast) ... 50 4e-08
ref|YP_007889763.1| hypothetical protein RF2 (chloroplast) [Vign... 47 9e-08
ref|YP_003434383.1| hypothetical protein RF2 [Vigna radiata] gi|... 47 9e-08
ref|YP_006883306.1| hypothetical chloroplast RF2 (chloroplast) [... 49 9e-08
>gb|AEK78183.1| hypothetical chloroplast RF2 [Gisekia africana]
Length = 2275
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWNLFQT
Sbjct: 1203 MYRTFQRDSAFSTLSKWNLFQT 1224
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK FC KKCVEKGQMY
Sbjct: 1164 LNFNSNMGLIYTPCSEKYLPSEKRKKQSFCLKKCVEKGQMY 1204
>gb|AEK71511.1| hypothetical chloroplast RF2 [Lythrum flagellare]
Length = 2278
Score = 49.7 bits (117), Expect(2) = 5e-09
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWNLFQT
Sbjct: 1208 MYRTFQRDSAFSTLSKWNLFQT 1229
Score = 36.2 bits (82), Expect(2) = 5e-09
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK C KKCVEKGQMY
Sbjct: 1169 LNFNSNMGLIHTPCSEKYLPSEKRKKPSLCLKKCVEKGQMY 1209
>ref|YP_005088849.1| Ycf2 (chloroplast) [Millettia pinnata]
gi|374249596|ref|YP_005088866.1| Ycf2 (chloroplast)
[Millettia pinnata] gi|356474868|gb|AET11386.1| Ycf2
(chloroplast) [Millettia pinnata]
gi|356474885|gb|AET11402.1| Ycf2 (chloroplast) [Millettia
pinnata]
Length = 2285
Score = 49.7 bits (117), Expect(2) = 9e-09
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWNLFQT
Sbjct: 1207 MYRTFQRDSAFSTLSKWNLFQT 1228
Score = 35.4 bits (80), Expect(2) = 9e-09
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK CPKKC+EKG MY
Sbjct: 1168 LNFNSNMGLIHTPCSDKYLPSEKRKKWSPCPKKCLEKGHMY 1208
>gb|AEK71591.1| hypothetical chloroplast RF2 [Terminalia catappa]
Length = 2271
Score = 49.7 bits (117), Expect(2) = 1e-08
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWNLFQT
Sbjct: 1202 MYRTFQRDSAFSTLSKWNLFQT 1223
Score = 35.0 bits (79), Expect(2) = 1e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 132 TEKRKNGVFCPKKCVEKGQMY 70
+EKRK C KKCVEKGQMY
Sbjct: 1183 SEKRKKWSLCLKKCVEKGQMY 1203
>gb|ADB24086.1| Ycf2 [Cynomorium songaricum]
Length = 2288
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1225 MYRTFQRDSAFSTLSKWNIFQT 1246
Score = 35.0 bits (79), Expect(2) = 2e-08
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 161 HTPCPEKYLPPKRGKTESFVQRNALRKGR 75
HTPC EKYLP ++ K + L KGR
Sbjct: 1196 HTPCSEKYLPSEKRKKRGLCLKKCLEKGR 1224
>ref|YP_004842281.1| hypothetical chloroplast RF2 [Pyrus pyrifolia]
gi|346683354|ref|YP_004842298.1| hypothetical chloroplast
RF2 [Pyrus pyrifolia] gi|345433603|dbj|BAK69425.1|
hypothetical chloroplast RF2 [Pyrus pyrifolia]
gi|345433621|dbj|BAK69443.1| hypothetical chloroplast RF2
[Pyrus pyrifolia]
Length = 2281
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1218 MYRTFQRDSAFSTLSKWNIFQT 1239
Score = 35.0 bits (79), Expect(2) = 2e-08
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 161 HTPCPEKYLPPKRGKTESFVQRNALRKGR 75
HTPC EKYLP ++ K + L KGR
Sbjct: 1189 HTPCSEKYLPSEKRKKRGLCLKKCLEKGR 1217
>ref|YP_008965535.1| hypothetical chloroplast RF21 [Pyrus spinosa]
gi|568246791|ref|YP_008965553.1| hypothetical chloroplast
RF21 [Pyrus spinosa] gi|565666507|emb|CDI73607.1|
hypothetical chloroplast RF21 [Pyrus spinosa]
gi|565666525|emb|CDI73626.1| hypothetical chloroplast
RF21 [Pyrus spinosa]
Length = 2279
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1216 MYRTFQRDSAFSTLSKWNIFQT 1237
Score = 35.0 bits (79), Expect(2) = 2e-08
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 161 HTPCPEKYLPPKRGKTESFVQRNALRKGR 75
HTPC EKYLP ++ K + L KGR
Sbjct: 1187 HTPCSEKYLPSEKRKKRGLCLKKCLEKGR 1215
>gb|AEK71440.1| hypothetical chloroplast RF2 [Ceanothus prostratus]
Length = 2272
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1204 MYRTFQRDSAFSTLSKWNIFQT 1225
Score = 35.0 bits (79), Expect(2) = 2e-08
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 161 HTPCPEKYLPPKRGKTESFVQRNALRKGR 75
HTPC EKYLP ++ K + L KGR
Sbjct: 1175 HTPCSEKYLPSEKRKKRGLCLKKCLEKGR 1203
>ref|NP_084839.1| Ycf2 [Lotus japonicus] gi|13518498|ref|NP_084856.1| Ycf2 [Lotus
japonicus] gi|23822370|sp|Q9B1K6.1|YCF2_LOTJA RecName:
Full=Protein Ycf2 gi|13359021|dbj|BAB33238.1|
hypothetical protein [Lotus japonicus]
gi|13359039|dbj|BAB33256.1| hypothetical protein [Lotus
japonicus]
Length = 2298
Score = 48.1 bits (113), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDS FSTLSKWNLFQT
Sbjct: 1217 MYRTFQRDSVFSTLSKWNLFQT 1238
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3
Query: 132 TEKRKNGVFCPKKCVEKGQMY 70
+E RK G+ C KKC+EKGQMY
Sbjct: 1198 SENRKKGIPCLKKCLEKGQMY 1218
>gb|AFQ39506.1| putative chloroplast RF2 [Fragaria nilgerrensis]
Length = 2273
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1210 MYRTFQRDSAFSTLSKWNIFQT 1231
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK C KKCVEKGQMY
Sbjct: 1171 LNFNSNMGLIHTPCSEKYLPSEKRKGRGRCLKKCVEKGQMY 1211
>gb|AFQ39497.1| putative chloroplast RF2 [Fragaria viridis]
Length = 2273
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1210 MYRTFQRDSAFSTLSKWNIFQT 1231
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK C KKCVEKGQMY
Sbjct: 1171 LNFNSNMGLIHTPCSEKYLPSEKRKRRGRCLKKCVEKGQMY 1211
>gb|AFQ39461.1| putative chloroplast RF2 [Fragaria x ananassa subsp. cuneifolia]
gi|402239285|gb|AFQ39533.1| putative chloroplast RF2
[Fragaria tibetica]
Length = 2273
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1210 MYRTFQRDSAFSTLSKWNIFQT 1231
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK C KKCVEKGQMY
Sbjct: 1171 LNFNSNMGLIHTPCSEKYLPSEKRKRRGRCLKKCVEKGQMY 1211
>ref|XP_002523212.1| conserved hypothetical protein [Ricinus communis]
gi|223537508|gb|EEF39133.1| conserved hypothetical
protein [Ricinus communis]
Length = 451
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWNLFQT
Sbjct: 54 MYRTFQRDSAFSTLSKWNLFQT 75
Score = 33.9 bits (76), Expect(2) = 3e-08
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 161 HTPCPEKYLPPKRGKTESFVQRNALRKGR 75
HTPC EKYLP ++ K + L+KG+
Sbjct: 25 HTPCSEKYLPSEKRKKRRLCLKKCLKKGQ 53
>gb|AGE93499.1| hypothetical chloroplast RF21 [Xiphidium caeruleum]
gi|449326941|gb|AGE93518.1| hypothetical chloroplast RF21
[Xiphidium caeruleum]
Length = 2288
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFS LSKWNLFQT
Sbjct: 1205 MYRTFQRDSAFSNLSKWNLFQT 1226
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3
Query: 126 KRKNGVFCPKKCVEKGQMY 70
KRKNG C KKCVEK QMY
Sbjct: 1188 KRKNGSLCLKKCVEKRQMY 1206
>gb|AEX93975.1| hypothetical chloroplast RF21 (chloroplast) [Iris tenax]
Length = 2287
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFS LSKWNLFQT
Sbjct: 1212 MYRTFQRDSAFSNLSKWNLFQT 1233
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3
Query: 126 KRKNGVFCPKKCVEKGQMY 70
KRKN C KKCVEKGQMY
Sbjct: 1195 KRKNRSLCLKKCVEKGQMY 1213
>gb|AEZ48741.1| hypothetical chloroplast RF2, partial [Iris virginica]
Length = 2286
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFS LSKWNLFQT
Sbjct: 1214 MYRTFQRDSAFSNLSKWNLFQT 1235
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3
Query: 126 KRKNGVFCPKKCVEKGQMY 70
KRKN C KKCVEKGQMY
Sbjct: 1197 KRKNRSLCLKKCVEKGQMY 1215
>ref|YP_008082624.1| hypothetical chloroplast RF21 (chloroplast) [Utricularia gibba]
gi|519704569|ref|YP_008082645.1| hypothetical chloroplast
RF21 (chloroplast) [Utricularia gibba]
gi|498921897|gb|AGL61118.1| hypothetical chloroplast RF21
(chloroplast) [Utricularia gibba]
gi|498921919|gb|AGL61140.1| hypothetical chloroplast RF21
(chloroplast) [Utricularia gibba]
Length = 2271
Score = 49.7 bits (117), Expect(2) = 4e-08
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWNLFQT
Sbjct: 1200 MYRTFQRDSAFSTLSKWNLFQT 1221
Score = 33.1 bits (74), Expect(2) = 4e-08
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -3
Query: 132 TEKRKNGVFCPKKCVEKGQMY 70
+EKRK C KCVEKGQMY
Sbjct: 1181 SEKRKKRSLCLNKCVEKGQMY 1201
>ref|YP_007889763.1| hypothetical protein RF2 (chloroplast) [Vigna angularis]
gi|501594988|ref|YP_007889779.1| hypothetical protein RF2
(chloroplast) [Vigna angularis]
gi|478620920|dbj|BAN14967.1| hypothetical protein RF2
(chloroplast) [Vigna angularis]
gi|478620937|dbj|BAN14984.1| hypothetical protein RF2
(chloroplast) [Vigna angularis]
Length = 2291
Score = 46.6 bits (109), Expect(2) = 9e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQ+DS FSTLSKWNLFQT
Sbjct: 1209 MYRTFQQDSVFSTLSKWNLFQT 1230
Score = 35.0 bits (79), Expect(2) = 9e-08
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNT---HS-MS*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN H+ S + F +EKRK C +KC+EKGQMY
Sbjct: 1170 LNFNSNMGWIHTPCSEKYFPSEKRKKRSSCLQKCLEKGQMY 1210
>ref|YP_003434383.1| hypothetical protein RF2 [Vigna radiata]
gi|289066883|ref|YP_003434400.1| hypothetical protein RF2
[Vigna radiata] gi|259020052|gb|ACV90250.1| hypothetical
protein RF2 [Vigna radiata] gi|259020070|gb|ACV90268.1|
hypothetical protein RF2 [Vigna radiata]
Length = 2285
Score = 46.6 bits (109), Expect(2) = 9e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQ+DS FSTLSKWNLFQT
Sbjct: 1209 MYRTFQQDSVFSTLSKWNLFQT 1230
Score = 35.0 bits (79), Expect(2) = 9e-08
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNT---HS-MS*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN H+ S + F +EKRK C +KC+EKGQMY
Sbjct: 1170 LNFNSNMGWIHTPCSEKYFPSEKRKKRSSCLQKCLEKGQMY 1210
>ref|YP_006883306.1| hypothetical chloroplast RF2 (chloroplast) [Fragaria vesca subsp.
bracteata] gi|408830362|ref|YP_006883379.1| hypothetical
chloroplast RF2 [Fragaria mandshurica]
gi|428697243|ref|YP_007025426.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria chiloensis]
gi|428697261|ref|YP_007025444.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria chiloensis]
gi|428697329|ref|YP_007025511.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria virginiana]
gi|428697347|ref|YP_007025529.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria virginiana]
gi|357198782|gb|AET62698.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria chiloensis]
gi|357198800|gb|AET62716.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria chiloensis]
gi|357198868|gb|AET62783.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria virginiana]
gi|357198886|gb|AET62801.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria virginiana]
gi|378554750|gb|AFC17685.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|378554824|gb|AFC17758.1| hypothetical chloroplast RF2
[Fragaria mandshurica]
Length = 2275
Score = 48.9 bits (115), Expect(2) = 9e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -2
Query: 67 MYRTFQRDSAFSTLSKWNLFQT 2
MYRTFQRDSAFSTLSKWN+FQT
Sbjct: 1212 MYRTFQRDSAFSTLSKWNIFQT 1233
Score = 32.7 bits (73), Expect(2) = 9e-08
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -3
Query: 180 LNFISNTHSM----S*EIFTTEKRKNGVFCPKKCVEKGQMY 70
LNF SN + S + +EKRK C KKC EKGQMY
Sbjct: 1173 LNFNSNMGLIHTPCSEKYLPSEKRKRRGRCLKKCFEKGQMY 1213