BLASTX nr result
ID: Rehmannia22_contig00013977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00013977
(837 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 457 e-126
gb|AFB73911.1| polyprotein [Citrus sinensis] 452 e-125
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 406 e-111
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 404 e-110
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 403 e-110
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 400 e-109
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 396 e-108
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 392 e-106
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 244 2e-62
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 241 2e-61
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 241 2e-61
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 240 4e-61
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 240 5e-61
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 239 7e-61
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 239 9e-61
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 239 1e-60
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 239 1e-60
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera] 238 3e-60
emb|CAN70932.1| hypothetical protein VITISV_040966 [Vitis vinifera] 238 3e-60
emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera] 238 3e-60
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 457 bits (1175), Expect = e-126
Identities = 227/279 (81%), Positives = 236/279 (84%), Gaps = 1/279 (0%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQEK-GDSNA 179
YN QERTKLDPKSRKCIFLGYADGVKGYRLWDPT HKIVISRDVIF ED+LQ K GD
Sbjct: 659 YNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDGT 718
Query: 180 VKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYV 359
VKE ET V VENN +N D SSEA PEH RRSTRER+PP W SEYV
Sbjct: 719 VKEKSETVPVYVENNPENSD--SSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYV 776
Query: 360 MESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAI 539
E NVAYCLLTEDGEPSTFHEA S D + WMTAM EEIEALHKN+TW+LVPLPHGRKAI
Sbjct: 777 TEINVAYCLLTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPHGRKAI 836
Query: 540 GNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATFD 719
GNKWVYKIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVR++LAMCATFD
Sbjct: 837 GNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFD 896
Query: 720 LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC
Sbjct: 897 LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 935
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 452 bits (1162), Expect = e-125
Identities = 225/279 (80%), Positives = 235/279 (84%), Gaps = 1/279 (0%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQEK-GDSNA 179
YN QERTKLD KSR+CIFLGYADGVKGYRLWDPT HKIVISRDVIF ED+LQ K GD
Sbjct: 659 YNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQLQRKDGDDGT 718
Query: 180 VKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYV 359
VKE ET V VENN +N D SSEA PEH RRSTRER+PP W SEYV
Sbjct: 719 VKEKSETVPVYVENNPENSD--SSEAAPEHEEQEPVESEAPEVRRSTRERRPPTWHSEYV 776
Query: 360 MESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAI 539
E NVAYCLLTEDGEPSTFHEA SSD + WMTAM EEIEALHKN+TW+LVPLP GRKAI
Sbjct: 777 TEINVAYCLLTEDGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLPRGRKAI 836
Query: 540 GNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATFD 719
GNKWVYKIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVR++LAMCATFD
Sbjct: 837 GNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFD 896
Query: 720 LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC
Sbjct: 897 LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 935
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 406 bits (1044), Expect = e-111
Identities = 202/278 (72%), Positives = 228/278 (82%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQEKGDSNAV 182
YN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT K+V+SRDV+FAE++LQ K +++
Sbjct: 659 YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSKQKNDST 718
Query: 183 KENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVM 362
++ET V +E + D SSEA P H RRSTR+ + P+WQS+YVM
Sbjct: 719 --SKETAIVQMEEKSKESD--SSEAEPVHEEQEPDDVNNGV-RRSTRQTQKPSWQSDYVM 773
Query: 363 ESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIG 542
S+ AYCL+TE+GEPSTFHEA SDASQWMTAMHEE+EALH+N+TW+LV LP GRKAIG
Sbjct: 774 TSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIG 833
Query: 543 NKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATFDL 722
NKWVYKIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT+RV+LAMCA DL
Sbjct: 834 NKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDL 893
Query: 723 HLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
HLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVC
Sbjct: 894 HLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVC 931
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 404 bits (1039), Expect = e-110
Identities = 201/280 (71%), Positives = 227/280 (81%), Gaps = 2/280 (0%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQ--EKGDSN 176
YN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT K+V+SRDV+FAE++LQ +K DS
Sbjct: 659 YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 177 AVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEY 356
+ +ET V +E + D +E+V E RRSTR+ + P+WQS+Y
Sbjct: 719 S----KETAIVQMEEKSKESDSSEAESVHEEQEPDDVNDGV---RRSTRQTQKPSWQSDY 771
Query: 357 VMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKA 536
VM S+ AYCL+TE+GEPSTFHEA SDASQWMTAMHEE+EALH+N+TW+LV LP GRKA
Sbjct: 772 VMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKA 831
Query: 537 IGNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATF 716
IGNKWVYKIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT+RV+LAMCA
Sbjct: 832 IGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAL 891
Query: 717 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVC
Sbjct: 892 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVC 931
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 403 bits (1036), Expect = e-110
Identities = 200/280 (71%), Positives = 227/280 (81%), Gaps = 2/280 (0%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQ--EKGDSN 176
YN QE+TKLDPKSRKCIFLGYAD VKGYRLWDPT K+V+SRDV+FAE++LQ +K DS
Sbjct: 659 YNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 177 AVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEY 356
+ +ET V +E + D +E+V E RRSTR+ + P+WQS+Y
Sbjct: 719 S----KETAIVQMEEKSKESDSSEAESVHEEQEPDDVNDGV---RRSTRQTQKPSWQSDY 771
Query: 357 VMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKA 536
VM S+ AYCL+TE+GEPSTFHEA SDASQWMTAMHEE+EALH+N+TW+LV LP GRKA
Sbjct: 772 VMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKA 831
Query: 537 IGNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATF 716
IGNKWVYKIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT+RV+LAMCA
Sbjct: 832 IGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAL 891
Query: 717 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVC
Sbjct: 892 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVC 931
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 400 bits (1029), Expect = e-109
Identities = 200/279 (71%), Positives = 220/279 (78%), Gaps = 1/279 (0%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQE-KGDSNA 179
YN QE TKLDPKSRKC FLGYADGVKGYRLWDPT HK+VISRDVIF ED+LQ + D +
Sbjct: 649 YNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRLQRGEVDDST 708
Query: 180 VKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYV 359
KE ETT + VE + + SSEA P H R+S RE++ P W S+YV
Sbjct: 709 EKEKPETTQIQVEEEFEQD---SSEAEPAHEEPEPESSGAPTTRQSDREKRRPTWHSDYV 765
Query: 360 MESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAI 539
ME NVAYCLLTEDGEPSTF EA SSD SQW AM EEIEALHKN TW LVPLP GRK I
Sbjct: 766 MEGNVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRKPI 825
Query: 540 GNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATFD 719
GNKWV+KIKR+ ++Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRV+LAMCATF+
Sbjct: 826 GNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFN 885
Query: 720 LHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
LHLEQLDVKTAFLHG+LEEEIYMLQPEGF + +NLVC
Sbjct: 886 LHLEQLDVKTAFLHGDLEEEIYMLQPEGFEDKENQNLVC 924
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 396 bits (1017), Expect = e-108
Identities = 197/280 (70%), Positives = 223/280 (79%), Gaps = 2/280 (0%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQ--EKGDSN 176
YN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT K+V+SRDV+FAE++LQ +K DS
Sbjct: 659 YNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENELQSEQKNDST 718
Query: 177 AVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEY 356
+ET + +E + D +E+V E RRSTR+ + P+WQS+Y
Sbjct: 719 F----KETAILQIEEKSKESDSSEAESVHEEQEPDDVNNGV---RRSTRQTQKPSWQSDY 771
Query: 357 VMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKA 536
VM + AYCL+ E+GEPSTFHEA SDASQWMTA+HEE+EAL KN+TW+LV LP GRKA
Sbjct: 772 VMTGHDAYCLIAEEGEPSTFHEALNGSDASQWMTAIHEEMEALRKNKTWELVELPKGRKA 831
Query: 537 IGNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATF 716
IGNKWVYKIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT+RV+LAMCA
Sbjct: 832 IGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAL 891
Query: 717 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
DLHLEQLDVKTAFLHGELEEEIYMLQPEGF E GKENLVC
Sbjct: 892 DLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVC 931
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 392 bits (1006), Expect = e-106
Identities = 194/278 (69%), Positives = 220/278 (79%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQEKGDSNAV 182
YN QERTKLDPKSR+C FLGYAD VKGYRLWDPT KI +SRDVIF E++LQ++ ++
Sbjct: 659 YNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQKEQKNDGT 718
Query: 183 KENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVM 362
+ET TV +E E+ SEA PEH RR+TR+ + P+W SEYVM
Sbjct: 719 --TKETATVEIEEKSGEEN---SEAEPEHEEQEPNEVNDAEPRRTTRQIRKPSWHSEYVM 773
Query: 363 ESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIG 542
S+ AYCLL+EDGEPSTFHEA SDAS WM AM EEIEALH+N TW+LV LP GRKAIG
Sbjct: 774 ASHDAYCLLSEDGEPSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIG 833
Query: 543 NKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATFDL 722
NKWV+KIKRD N+Q ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTT+R++LAMCA F+L
Sbjct: 834 NKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFEL 893
Query: 723 HLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
HLEQLDVKTAFLHGELEEEIYMLQPEGF E +ENLVC
Sbjct: 894 HLEQLDVKTAFLHGELEEEIYMLQPEGFEEKERENLVC 931
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 244 bits (624), Expect = 2e-62
Identities = 136/297 (45%), Positives = 188/297 (63%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAED-KLQEKGDSNA 179
Y + KL+P++ KCIFLGY GVKGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 874 YAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNV 933
Query: 180 VKENQETTTVLVENNL------QNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER---- 329
E+QE +V VE+ + + ED ++ P R ++R
Sbjct: 934 PVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRN 993
Query: 330 -KPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+N VAY L + + EPST+ EA S D ++W+TAMH+E+E+L
Sbjct: 994 IKPP---QRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLE 1050
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRD-NNNQEERYRARLVVKGYAQKEGIDFNEIFSP 665
KN TW+LV LP +K I KW++K K +++ E RY+ARL+ KGY+Q GIDFN++FSP
Sbjct: 1051 KNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSP 1110
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
VV+ +++R +L++ A D LEQ+DVKTAFLHGELEE+IYM QP+GF GKENLVC
Sbjct: 1111 VVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVC 1167
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 241 bits (616), Expect = 2e-61
Identities = 130/292 (44%), Positives = 180/292 (61%), Gaps = 18/292 (6%)
Frame = +3
Query: 15 ERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKL-------QEKGDS 173
ERTKL+PKS +C+F+G+ GVKGY+LWD K VISRDV+F E + DS
Sbjct: 635 ERTKLEPKSLECLFIGFEKGVKGYKLWDIVNEKKVISRDVVFDEREAISISLAKPSVADS 694
Query: 174 NAVKENQE--TTTVLVENNLQNEDPK---SSEAVPEHXXXXXXXXXXXXXRRSTRERKP- 335
A E E V +E + P E P+ +RS KP
Sbjct: 695 EAQVEQNEQGNDEVAIEEPEHQQQPTVMAQVEQSPQRGQNSPIPQAPESFKRSIALDKPK 754
Query: 336 ----PAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTW 503
P + + E +V+ L G+P+T+ +A ES +++ W+ AM EE+E+LHKN W
Sbjct: 755 RNRKPIQRFGFEPEEDVSRALSISQGDPTTYEDAIESVESAGWIGAMTEEMESLHKNSVW 814
Query: 504 KLVPLPHGRKAIGNKWVYKIKRDNNNQEE-RYRARLVVKGYAQKEGIDFNEIFSPVVRLT 680
+LVP P RK +G KWV++ K + + Y+ARLV KGY+QKEG+D++EIFSPVV+ T
Sbjct: 815 ELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHT 874
Query: 681 TVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
++R++L++ A +D+ +EQ+DVKTAFLHG+LEE+IYM QPEGF ETGKENLVC
Sbjct: 875 SIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVC 926
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 241 bits (616), Expect = 2e-61
Identities = 136/297 (45%), Positives = 186/297 (62%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDK-LQEKGDSNA 179
Y + KL+P++ KCIFLGYA GVKGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 639 YAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNV 698
Query: 180 VKENQETTTVLVENNL------QNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER---- 329
E+QE +V VE+ + + ED ++ P R +++
Sbjct: 699 PVESQEKASVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKRSIAKDKPKRN 758
Query: 330 -KPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+ VAY L + + EPST+ EA S D ++W+TAMH+E+E+L
Sbjct: 759 IKPPR---RYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLE 815
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRDNNNQEE-RYRARLVVKGYAQKEGIDFNEIFSP 665
KN TW+LV LP +K I KW++K K + +E RY+ARLV KGY+Q GIDFN++FSP
Sbjct: 816 KNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSP 875
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
VV+ +++R +L + A D LEQ++VKTAFLHGELEE+IYM QPEGF GKENLVC
Sbjct: 876 VVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 932
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 240 bits (613), Expect = 4e-61
Identities = 133/297 (44%), Positives = 187/297 (62%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDK-LQEKGDSNA 179
Y ++T ++P++ KCIFLGY GVKGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 409 YAIDKKTPIEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNV 468
Query: 180 VKENQETTTVLVENNL------QNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER---- 329
E+QE T+V VE+ + + ED ++ P R +++
Sbjct: 469 PVESQEKTSVQVEHLISSGHAPEKEDVAINQDAPVIQDSDSSIVHQSPKRSIAKDKPKRN 528
Query: 330 -KPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+N VAY L + + EPS + EA S D ++W+T MH+E+E+L
Sbjct: 529 IKPPR---RYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLE 585
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRDNNNQEE-RYRARLVVKGYAQKEGIDFNEIFSP 665
KN TW+LV LP +K+I KW++K K + +E RY+ARLV KGY+Q IDFN++FSP
Sbjct: 586 KNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSP 645
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
+V+ +++R +L++ A D LEQ+DVKTAFLHGELEE+IYM QPEGF GKENLVC
Sbjct: 646 IVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 702
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 240 bits (612), Expect = 5e-61
Identities = 136/297 (45%), Positives = 184/297 (61%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAED-KLQEKGDSNA 179
Y + KL+P+ KCIFLGY GVKGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 576 YAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNV 635
Query: 180 VKENQETTTVLVENNL------QNEDPKSSEAVPEHXXXXXXXXXXXXXR-----RSTRE 326
E+QE +V VE+ + + ED ++ P R R R
Sbjct: 636 PVESQEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRN 695
Query: 327 RKPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+N VAY L + + EPST+ +A S D ++W+TAMH+E+E+L
Sbjct: 696 TKPPR---RYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLE 752
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRDNNNQEE-RYRARLVVKGYAQKEGIDFNEIFSP 665
KN +W+L LP +K I KW++K K + +E RY+ARLV KGY+Q GIDFN++FSP
Sbjct: 753 KNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSP 812
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
VV+ +++R +L++ A D LEQ+DVKTAFLHGELEE+IYM QPEGF GKENLVC
Sbjct: 813 VVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 869
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 239 bits (611), Expect = 7e-61
Identities = 137/297 (46%), Positives = 187/297 (62%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAED-KLQEKGDSNA 179
Y + KL+P++ KCIFLGY G+KGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 449 YAHVDNGKLEPRAIKCIFLGYPSGMKGYKLWCPKTKKVVISRNVVFHESVMLHDKPSTNV 508
Query: 180 VKENQETTTVLVENNL------QNEDPKSSEAVPEHXXXXXXXXXXXXXR-----RSTRE 326
E+QE +V VE+ + + E+ ++ VP R + R
Sbjct: 509 PVESQEKASVQVEHLISSGHAPEKENVAINQDVPVIEDSDSSTVQQSPKRFIAKDKPKRN 568
Query: 327 RKPPAWQSEYVMESN-VAYCL-LTED----GEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+N VAY L + ED EPST+ EA S D ++W+TAMH+E+E+L
Sbjct: 569 TKPP---QRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLE 625
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRD-NNNQEERYRARLVVKGYAQKEGIDFNEIFSP 665
KN TW+LV LP +K I KW++K K+ + + E Y+ARLV KGY+Q GIDFN++FSP
Sbjct: 626 KNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKARLVAKGYSQIPGIDFNDVFSP 685
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
VV+ +++R +L++ A D LEQ+DVKTAFLHGELEE+IYM Q EGF GKENLVC
Sbjct: 686 VVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQSEGFVVPGKENLVC 742
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 239 bits (610), Expect = 9e-61
Identities = 128/273 (46%), Positives = 177/273 (64%)
Frame = +3
Query: 18 RTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDKLQEKGDSNAVKENQE 197
R+KLD KS+ C F+GY D GYR WD KI+ SR+VIF E + + DS K +E
Sbjct: 605 RSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYK--DSTVQKGGEE 662
Query: 198 TTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVA 377
+ N+ ++ S+ V RRS+R +PP S +
Sbjct: 663 D-----KENVNSQVDLSTPVVE--------------VRRSSRNTRPPQRYSPVLN----- 698
Query: 378 YCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRKAIGNKWVY 557
Y LLT+ GEP + EA + ++S+W AM +E+++L NQTW+L LP G+KA+ NKWVY
Sbjct: 699 YLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVY 758
Query: 558 KIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCATFDLHLEQL 737
+IK +++ + RY+ARLVVKG+ QKEGID+ EIFSPVV+++T+R++L M A +LHLEQL
Sbjct: 759 RIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQL 817
Query: 738 DVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
DVKTAFLHG+LEE++YM+QPEGF G+ENLVC
Sbjct: 818 DVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVC 850
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 239 bits (609), Expect = 1e-60
Identities = 133/297 (44%), Positives = 183/297 (61%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDK-LQEKGDSNA 179
Y + KL+P++ KCIFLGY GVKGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 702 YAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNV 761
Query: 180 VKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER---------- 329
E+QE +V VE+ + + E V + + + +R
Sbjct: 762 PVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRN 821
Query: 330 -KPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+N VAY L + + EPST+ EA S D ++W+TAMH+E+E+L
Sbjct: 822 IKPPR---RYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLK 878
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRDNNNQEE-RYRARLVVKGYAQKEGIDFNEIFSP 665
KN TW+ V LP +K I KW++K K + +E RY+ARLV KGY+Q GIDFN++FSP
Sbjct: 879 KNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSP 938
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
+++ +++R +L + A D LEQ+DVKTAFLHGELEE+IYM QPEGF GKENLVC
Sbjct: 939 IMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVC 995
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 239 bits (609), Expect = 1e-60
Identities = 133/297 (44%), Positives = 183/297 (61%), Gaps = 19/297 (6%)
Frame = +3
Query: 3 YNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAEDK-LQEKGDSNA 179
Y + KL+P++ KCIFLGY GVKGY+LW P T K+VISR+V+F E L +K +N
Sbjct: 702 YAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNV 761
Query: 180 VKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER---------- 329
E+QE +V VE+ + + E V + + + +R
Sbjct: 762 PVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRN 821
Query: 330 -KPPAWQSEYVMESN-VAYCL-----LTEDGEPSTFHEATESSDASQWMTAMHEEIEALH 488
KPP Y+ E+N VAY L + + EPST+ EA S D ++W+TAMH+E+E+L
Sbjct: 822 IKPPR---RYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLK 878
Query: 489 KNQTWKLVPLPHGRKAIGNKWVYKIKRDNNNQEE-RYRARLVVKGYAQKEGIDFNEIFSP 665
KN TW+ V LP +K I KW++K K + +E RY+ARLV KGY+Q GIDFN++FSP
Sbjct: 879 KNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSP 938
Query: 666 VVRLTTVRVILAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
+++ +++R +L + A D LEQ+DVKTAFLHGELEE+IYM QPEGF GKENLVC
Sbjct: 939 IMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVC 995
>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
Length = 1246
Score = 238 bits (606), Expect = 3e-60
Identities = 128/281 (45%), Positives = 176/281 (62%), Gaps = 8/281 (2%)
Frame = +3
Query: 18 RTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAE-----DKLQEKGDSNAV 182
R+KLD KS+ C F+GY D GYR WD KI+ SR+VIF E D+ D +
Sbjct: 627 RSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEI 686
Query: 183 KENQE---TTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSE 353
+ + L E+ +Q + E V RRS+R +PP S
Sbjct: 687 DQKKSEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPVVEV---RRSSRNTRPPQRYSP 743
Query: 354 YVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRK 533
+ Y LLT+ GEP + EA + ++S+W AM +E+++L NQTW+L LP G+K
Sbjct: 744 VLN-----YLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKK 798
Query: 534 AIGNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCAT 713
A+ NKWVY+IK +++ + RY+ARLVVKG+ QKEGID+ EIFSPVV+++T+R++L M A
Sbjct: 799 ALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAA 857
Query: 714 FDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
+LHLEQLDVKTAFLHG+LEE++YM+QPEGF G+ENLVC
Sbjct: 858 ENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVC 898
>emb|CAN70932.1| hypothetical protein VITISV_040966 [Vitis vinifera]
Length = 1212
Score = 238 bits (606), Expect = 3e-60
Identities = 129/281 (45%), Positives = 177/281 (62%), Gaps = 8/281 (2%)
Frame = +3
Query: 18 RTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAE-----DKLQEKGDSNAV 182
R+KLD KS+ C F+GY D GYR WD KI+ SR+VIF E D+ D +
Sbjct: 581 RSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEI 640
Query: 183 KENQE---TTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSE 353
+ + L E+ +Q + E V RRS+R +PP S
Sbjct: 641 DQKKSEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPXVEV---RRSSRNTRPPQRYSP 697
Query: 354 YVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRK 533
+ Y LLT+ GEP + EA + ++S+W AM +E+++L NQTW+L LP G+K
Sbjct: 698 VLN-----YLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWZLTELPVGKK 752
Query: 534 AIGNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCAT 713
A+ NKWVY+IK +++ + RY+ARLVVKG+ QKEGID+ EIFSPVV+++T+R++L M A
Sbjct: 753 ALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAA 811
Query: 714 FDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
+LHLEQLDVKTAFLHG+LEE++YM+QPEGF G+ENLVC
Sbjct: 812 ENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVC 852
>emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]
Length = 1261
Score = 238 bits (606), Expect = 3e-60
Identities = 128/281 (45%), Positives = 176/281 (62%), Gaps = 8/281 (2%)
Frame = +3
Query: 18 RTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKIVISRDVIFAE-----DKLQEKGDSNAV 182
R+KLD KS+ C F+GY D GYR WD KI+ SR+VIF E D+ D +
Sbjct: 618 RSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEI 677
Query: 183 KENQE---TTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSE 353
+ + L E+ +Q + E V RRS+R +PP S
Sbjct: 678 DQKKSEFVNLDELTESTVQKGGEEDKENVNSQVDLSTPIVEV---RRSSRNTRPPQRYSP 734
Query: 354 YVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAMHEEIEALHKNQTWKLVPLPHGRK 533
+ Y LLT+ GEP + EA + ++S+W AM +E+++L NQTW+L LP G+K
Sbjct: 735 VLN-----YLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLGNQTWZLTELPVGKK 789
Query: 534 AIGNKWVYKIKRDNNNQEERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVILAMCAT 713
A+ NKWVY+IK +++ + RY+ARLVVKG+ QKEGID+ EIFSPVV+++T+R++L M A
Sbjct: 790 ALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAA 848
Query: 714 FDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVC 836
+LHLEQLDVKTAFLHG+LEE++YM+QPEGF G+ENLVC
Sbjct: 849 ENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVC 889