BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00013742
         (606 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   310   3e-82
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   310   3e-82
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   294   1e-77
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   293   2e-77
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   292   6e-77
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   290   2e-76
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise...   289   4e-76
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...   287   1e-75
ref|XP_003601293.1| Pentatricopeptide repeat-containing protein,...   285   5e-75
gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]     283   2e-74
gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protei...   280   2e-73
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof...   280   2e-73
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   273   3e-71
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   269   4e-70
gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus...   266   3e-69
ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutr...   266   3e-69
ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Caps...   266   3e-69
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   264   1e-68
ref|NP_177628.2| pentatricopeptide repeat-containing protein [Ar...   264   1e-68
ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp....   264   2e-68

>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  310 bits (793), Expect = 3e-82
 Identities = 146/201 (72%), Positives = 166/201 (82%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKAL FFNLL+ H SY HS            R+RDYKT W LV +M+S +LG
Sbjct: 69  LKRLWNHGPKALHFFNLLDHHRSYTHSATAFDHAIDIAARMRDYKTQWKLVARMQSRRLG 128

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P PKTFAIITERYVSAGKADKA+ +FLSMH+HGC QDLNSFNAFL VLCKSKRAEMA KL
Sbjct: 129 PNPKTFAIITERYVSAGKADKAVNVFLSMHKHGCPQDLNSFNAFLDVLCKSKRAEMALKL 188

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK+FR RFKAD ISYN +ANGFCL K+TP+A E+++EM+ERGL PT+ TYNI+L G+FRA
Sbjct: 189 FKMFRSRFKADTISYNTLANGFCLVKRTPKAQEILKEMVERGLNPTITTYNIMLNGFFRA 248

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQIKE WEFFLQMKKRK +ID
Sbjct: 249 GQIKEAWEFFLQMKKRKCDID 269



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+  K      T+  I   +  AG+ +KA K+F  M   G    + 
Sbjct: 247 RAGQIKEAWEFFLQMKKRKCDIDVVTYTTIVHGFGVAGEVEKAQKLFNEMVGAGILPSVA 306

Query: 300 SFNAFLGVLCKSKRAEMAYKLF-KIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + V+CK    E A  +F ++ R  +  +  +YN I  G C   +   A+E M +M
Sbjct: 307 TYNALIQVMCKKDSVENAILIFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAMEYMDKM 366

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
            E G EP + TYN++++ Y   G+I++    F +M
Sbjct: 367 NEDGCEPNVQTYNVVIRYYCDEGEIEKSLRVFERM 401



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAY 356
           L PT  T+ I+   +  AG+  +A + FL M +  C  D+ ++   +     +   E A 
Sbjct: 231 LNPTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTIVHGFGVAGEVEKAQ 290

Query: 357 KLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGY 533
           KLF    G      V +YN +    C K     A+ +  EM+ +G  P   TYN +++G 
Sbjct: 291 KLFNEMVGAGILPSVATYNALIQVMCKKDSVENAILIFNEMLRKGYLPNATTYNAIIRGL 350

Query: 534 FRAGQIKEGWEFFLQMKK 587
              G++    E+  +M +
Sbjct: 351 CHVGKMDNAMEYMDKMNE 368


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  310 bits (793), Expect = 3e-82
 Identities = 146/201 (72%), Positives = 167/201 (83%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKALQFFNLL+ H SY HS            R+RDYKT W LV +M+S +LG
Sbjct: 75  LKRLWNHGPKALQFFNLLDHHRSYTHSTIAFDHAIDIAARMRDYKTMWKLVARMQSRRLG 134

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P PKTFAIITERYVSAGKADKA+ +FLSMH+HGC QDL+SFNAFL VLCKSKRAEMA KL
Sbjct: 135 PNPKTFAIITERYVSAGKADKAVNVFLSMHKHGCPQDLSSFNAFLDVLCKSKRAEMALKL 194

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK+FR RFKAD ISYN +ANGFCL K+TP+A E+++EM+ERGL PT+ TYNI+L G+FRA
Sbjct: 195 FKMFRSRFKADTISYNTLANGFCLVKRTPKAQEILKEMVERGLNPTITTYNIMLNGFFRA 254

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQIKE WEFFLQMKKRK +ID
Sbjct: 255 GQIKEAWEFFLQMKKRKCDID 275



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+  K      T+  +   +  AG+ +KA K+F  M   G    + 
Sbjct: 253 RAGQIKEAWEFFLQMKKRKCDIDVVTYTTLVHGFGVAGEVEKAQKLFNEMVGAGILPSIA 312

Query: 300 SFNAFLGVLCKSKRAEMAYKLF-KIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + V+CK    E A  +F ++ R  +  +  +YN I  G C   +   A+E M +M
Sbjct: 313 TYNALIQVMCKKDSTENAILVFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAMEYMDKM 372

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
            E G EP + TYN++++ Y   G+I++    F +M
Sbjct: 373 NEDGCEPNVQTYNVVIRYYCDEGEIEKSLRVFERM 407



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAY 356
           L PT  T+ I+   +  AG+  +A + FL M +  C  D+ ++   +     +   E A 
Sbjct: 237 LNPTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTLVHGFGVAGEVEKAQ 296

Query: 357 KLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGY 533
           KLF    G      + +YN +    C K  T  A+ V  EM+ +G  P   TYN +++G 
Sbjct: 297 KLFNEMVGAGILPSIATYNALIQVMCKKDSTENAILVFNEMLRKGYLPNATTYNAIIRGL 356

Query: 534 FRAGQIKEGWEFFLQMKK 587
              G++    E+  +M +
Sbjct: 357 CHVGKMDNAMEYMDKMNE 374



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = +3

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P   T+  I       GK D A++    M+E GC+ ++ ++N  +   C     E + ++
Sbjct: 344 PNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRYYCDEGEIEKSLRV 403

Query: 363 F-KIFRGRFKADVISYNIIANGFCLKKQTPRAL---EVMREMIERGLEPTLATYNILLKG 530
           F ++  G    ++ +YNI+ +   ++K++   L   +++ EM++RG  P   T+N +L G
Sbjct: 404 FERMSTGHCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLNG 463

Query: 531 YFRAG 545
               G
Sbjct: 464 LLLTG 468


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  294 bits (752), Expect = 1e-77
 Identities = 138/202 (68%), Positives = 165/202 (81%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLW HGPKALQFF  LE HPSY HS            R+RDYKT W LV +MR+ ++G
Sbjct: 85  LKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIG 144

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAY-K 359
           P+ KTFAII ER+V+AGK D+A+K+FLSM EHGC QDL+SFN  L +LCKSKR EMAY  
Sbjct: 145 PSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNN 204

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           LFK+ RG+FKADV+SYNIIANG+CL K+TP+ALEV++EM+ERGL PT+ TYNILLKGYFR
Sbjct: 205 LFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFR 264

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQ+KE WEFFLQMK+R++EID
Sbjct: 265 AGQLKEAWEFFLQMKEREVEID 286



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           L PT  T+ I+ + Y  AG+  +A + FL M E   + D+ ++   +   GV+ + KRA 
Sbjct: 248 LTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRAR 307

Query: 348 MAYKLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILL 524
              K+F    G        +YN +    C K     A+ +  EM+++G  P L TYN+++
Sbjct: 308 ---KVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVI 364

Query: 525 KGYFRAGQIKEGWEFFLQMK 584
           +G F AG + +  EF  +MK
Sbjct: 365 RGLFHAGNMDKAMEFIERMK 384



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+  ++     T+  +   +   G+  +A K+F  M   G      
Sbjct: 264 RAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTA 323

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+ + +  +  ++ +YN++  G        +A+E +  M
Sbjct: 324 TYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERM 383

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G EP + TYN+ ++ +  AG +++G   F +M
Sbjct: 384 KTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM 418


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  293 bits (751), Expect = 2e-77
 Identities = 133/201 (66%), Positives = 161/201 (80%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKAL FF  L+ HP+Y HS            RLRDYK+ W  V +MR+ ++G
Sbjct: 72  LKRLWNHGPKALLFFKTLDRHPTYTHSSSSYDHAVDIAGRLRDYKSLWAFVARMRALRVG 131

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P P+TFAII ERYV+AGK D+A+K+FLSMHEHGC QDLNSFN  L VLCK+KR E AY L
Sbjct: 132 PAPRTFAIIAERYVAAGKPDRAVKVFLSMHEHGCPQDLNSFNTVLDVLCKAKRVEKAYNL 191

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK+FRGRF+AD +SYN+I NG+CL K+TP+ALEV+REM+ERG+EP+L TYNI+LKGY RA
Sbjct: 192 FKVFRGRFRADCVSYNVIVNGWCLIKRTPKALEVLREMVERGIEPSLVTYNIMLKGYLRA 251

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQ+KE WEFF +MK+RK EID
Sbjct: 252 GQVKEAWEFFREMKRRKCEID 272



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+  K      T+  +   +   G+  K  KIF  M E G    + 
Sbjct: 250 RAGQVKEAWEFFREMKRRKCEIDVVTYTTLVHGFGVLGEIKKVRKIFDGMVEEGVLPSVA 309

Query: 300 SFNAFLGVLCKSKRAEMAYKLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+    + +  +V +YN++  G C        +E+M  M
Sbjct: 310 TYNALIQVLCKKDSVENAVVVFEEMVSKGYVPNVTTYNVLVRGLCHAGNMDSGMELMERM 369

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQMKK 587
            +   EP + TYN++++ +   GQI +  + F +M K
Sbjct: 370 KDDDCEPNVQTYNVVIRYFCDDGQIDKALDVFEKMGK 406



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
 Frame = +3

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAEMA 353
           P+  T+ I+ + Y+ AG+  +A + F  M    C+ D+ ++   +   GVL + K     
Sbjct: 236 PSLVTYNIMLKGYLRAGQVKEAWEFFREMKRRKCEIDVVTYTTLVHGFGVLGEIK----- 290

Query: 354 YKLFKIFRGRFKADVI----SYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNIL 521
            K+ KIF G  +  V+    +YN +    C K     A+ V  EM+ +G  P + TYN+L
Sbjct: 291 -KVRKIFDGMVEEGVLPSVATYNALIQVLCKKDSVENAVVVFEEMVSKGYVPNVTTYNVL 349

Query: 522 LKGYFRAGQIKEGWEFFLQMK 584
           ++G   AG +  G E   +MK
Sbjct: 350 VRGLCHAGNMDSGMELMERMK 370


>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568845657|ref|XP_006476684.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  292 bits (747), Expect = 6e-77
 Identities = 137/201 (68%), Positives = 161/201 (80%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           +KRLWNH  KAL FFN+L  HP+Y HS            RLRDY+T WTLV +M+S  LG
Sbjct: 76  IKRLWNHALKALHFFNILSYHPTYAHSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLG 135

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PT KTFAII ERYVSAGKAD+A+KIFLSMHEHGC+Q LNSFN  L +LCK K+ E AY L
Sbjct: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK+FRG+FKADVISYN+IANG+CL K+T +ALEV++EM++RGL P L TYNI+LKGYFRA
Sbjct: 196 FKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRA 255

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQI+E W FFL+MKKRK EID
Sbjct: 256 GQIEEAWRFFLEMKKRKCEID 276



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    +  W    +M+  K      T+  I   +   G+  +A  +F  M   G    + 
Sbjct: 254 RAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVA 313

Query: 300 SFNAFLGVLCKSKRAEMAYKLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+   G+ +  +  +YN++  G C   +  RALE +  M
Sbjct: 314 TYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERALEFVGRM 373

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
            +   EP + TYNIL++ +  AG+I+ G E F +M
Sbjct: 374 KDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           L P   T+ I+ + Y  AG+ ++A + FL M +  C+ D+ ++   +   GV+ + KRA 
Sbjct: 238 LNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGVVGEIKRAR 297

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +    +  G     V +YN +    C K     A+ V  EM+ +G  P   TYN++++
Sbjct: 298 NVFD--GMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIR 355

Query: 528 GYFRAGQIKEGWEFFLQMKKRKIE 599
           G    G+++   EF  +MK  + E
Sbjct: 356 GLCHTGEMERALEFVGRMKDDECE 379


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
           gi|557541992|gb|ESR52970.1| hypothetical protein
           CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  290 bits (743), Expect = 2e-76
 Identities = 136/201 (67%), Positives = 161/201 (80%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           +KRLWNH  KAL FFN+L  HP+Y HS            RLRDY+T W LV +M+S +LG
Sbjct: 76  IKRLWNHALKALHFFNILSYHPTYAHSRSSFDHAIDLAARLRDYRTVWILVHRMKSLRLG 135

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PT KTFAII ERYVSAGKAD+A+KIFLSMHEHGC+Q LNSFN  L +LCK K+ E AY L
Sbjct: 136 PTQKTFAIIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNL 195

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK+FRG+FKADVISYN+IANG+CL K+T +ALEV++EM++RGL P L TYNI+LKGYFRA
Sbjct: 196 FKVFRGKFKADVISYNVIANGWCLVKRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRA 255

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQI+E W FFL+MKKRK EID
Sbjct: 256 GQIEEAWRFFLEMKKRKCEID 276



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    +  W    +M+  K      T+  I   +   G+  +A  +F  M   G    + 
Sbjct: 254 RAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGIVGEIKRARNVFDGMVNGGVLPSVA 313

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+ + R  +  +  +YN++  G C   +  RALE +  M
Sbjct: 314 TYNAMIQVLCKKDSVENAILVFEEMVRKGYMPNSTTYNVVIRGLCHAGEMERALEFVGRM 373

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
            +   EP + TYNIL++ +  AG+I+ G E F +M
Sbjct: 374 KDDECEPNVQTYNILIRYFCDAGEIERGLELFEKM 408



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           L P   T+ I+ + Y  AG+ ++A + FL M +  C+ D+ ++   +   G++ + KRA 
Sbjct: 238 LNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTYTTIVHGFGIVGEIKRAR 297

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +    +  G     V +YN +    C K     A+ V  EM+ +G  P   TYN++++
Sbjct: 298 NVFD--GMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVRKGYMPNSTTYNVVIR 355

Query: 528 GYFRAGQIKEGWEFFLQMKKRKIE 599
           G   AG+++   EF  +MK  + E
Sbjct: 356 GLCHAGEMERALEFVGRMKDDECE 379


>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
          Length = 451

 Score =  289 bits (740), Expect = 4e-76
 Identities = 138/201 (68%), Positives = 160/201 (79%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKAL+FF  L+ HP YRHS            RLRDYK  W L+ +MRS KL 
Sbjct: 33  LKRLWNHGPKALEFFEALDRHPRYRHSAAAFDGAIDIAARLRDYKRVWNLIRRMRSRKLK 92

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P+PKTF+I+ ERY SAG+ADKA+ +FL+MH HGC QDL+SFNA L VLCKSKRAE A+KL
Sbjct: 93  PSPKTFSIVIERYASAGRADKAVNVFLTMHRHGCPQDLSSFNAMLDVLCKSKRAEKAHKL 152

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           F I RGRF+AD I+YNIIA GFCLKKQT RA+EVM+EM+ERGL PTL TYNILLKGYF A
Sbjct: 153 FTILRGRFRADAITYNIIAYGFCLKKQTSRAVEVMKEMVERGLIPTLTTYNILLKGYFGA 212

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQIK+G EFF Q+KKR +E+D
Sbjct: 213 GQIKQGLEFFSQLKKRNVEMD 233



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +3

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PT  T+ I+ + Y  AG+  + L+ F  + +   + D  SF   +  L  +   E A K+
Sbjct: 197 PTLTTYNILLKGYFGAGQIKQGLEFFSQLKKRNVEMDAVSFTTVVHGLGVAGEIEKARKV 256

Query: 363 FK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           F+ +        V SYN +    C K     A++V  EM ++G +P   TYN++++G   
Sbjct: 257 FREMSEAGVLPTVASYNAMIQILCKKDSVENAMKVFDEMQQKGTKPNATTYNLVIRGLCH 316

Query: 540 AGQIKEGWEFFLQMKK 587
            G+     E+  +MK+
Sbjct: 317 VGKFDMAIEYMDRMKE 332


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cicer arietinum]
          Length = 498

 Score =  287 bits (735), Expect = 1e-75
 Identities = 132/201 (65%), Positives = 159/201 (79%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKALQFF  LE HP+Y HS            RLRDY T W LV +MR+ +LG
Sbjct: 81  LKRLWNHGPKALQFFKHLERHPTYIHSTSAFEHAIDISARLRDYNTAWALVDRMRTLRLG 140

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PTP+TFAI++ERY + GKA +A+K+FLSMHEHGC QDLNSFN  L VLCK+KR EMA+ L
Sbjct: 141 PTPRTFAILSERYATGGKAHRAVKVFLSMHEHGCNQDLNSFNTILDVLCKTKRVEMAHNL 200

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK F+GRFK D +SYNI+ANG+CL K+TP AL+VM+EM+ERG+ PT+ TYN LLKGYFR+
Sbjct: 201 FKTFKGRFKCDSVSYNIMANGWCLMKRTPMALQVMKEMVERGITPTMVTYNTLLKGYFRS 260

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
            Q+ E W+FFL+MKKRK EID
Sbjct: 261 HQLNEAWDFFLEMKKRKCEID 281



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 38/155 (24%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R       W    +M+  K      T+  +   +  AG+  ++ ++F +M + G    + 
Sbjct: 259 RSHQLNEAWDFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVKEGLIPSVA 318

Query: 300 SFNAFLGVLCKSKRAEMAYKLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    + A  +F+   G+ +  ++ +YN++  G C   +  +ALE M  M
Sbjct: 319 TYNALIQVLCKKDNVQNALLVFEEMVGKGYVPNLTTYNVVIRGLCHSGEMEKALEFMERM 378

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
            E G  P++ TYN++++ +   G++++G+  F +M
Sbjct: 379 EEHGCRPSVQTYNVVIRYFCDDGELEKGFGLFEKM 413



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
 Frame = +3

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAEMA 353
           PT  T+  + + Y  + + ++A   FL M +  C+ D+ ++   +   GV  + KR++  
Sbjct: 245 PTMVTYNTLLKGYFRSHQLNEAWDFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRV 304

Query: 354 YKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGY 533
           +    + +      V +YN +    C K     AL V  EM+ +G  P L TYN++++G 
Sbjct: 305 FDA--MVKEGLIPSVATYNALIQVLCKKDNVQNALLVFEEMVGKGYVPNLTTYNVVIRGL 362

Query: 534 FRAGQIKEGWEFFLQMKK 587
             +G++++  EF  +M++
Sbjct: 363 CHSGEMEKALEFMERMEE 380



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = +3

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P   T+ ++      +G+ +KAL+    M EHGC+  + ++N  +   C     E  + L
Sbjct: 350 PNLTTYNVVIRGLCHSGEMEKALEFMERMEEHGCRPSVQTYNVVIRYFCDDGELEKGFGL 409

Query: 363 F-KIFRGRFKADVISYNIIANGFCLKKQTPRAL---EVMREMIERGLEPTLATYNILLKG 530
           F K+  G    ++ +YNI+ +   ++K++   +   +++ EM+ RG  P   T+N +L G
Sbjct: 410 FEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVVAGKLLIEMVGRGFLPRKFTFNRVLNG 469

Query: 531 YFRAG 545
               G
Sbjct: 470 LVLTG 474


>ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355490341|gb|AES71544.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 317

 Score =  285 bits (730), Expect = 5e-75
 Identities = 132/201 (65%), Positives = 157/201 (78%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKALQFF  L+ HP+Y HS            RLR+Y T W L+ +MR+ +LG
Sbjct: 73  LKRLWNHGPKALQFFKHLDRHPTYIHSISSFEHAVDIAARLREYNTAWALMGRMRALRLG 132

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PTPKTFAI+ ERY + GKA KA+K+FLSMHEHGC QDLNSFN  L VLCK+KR EMA  L
Sbjct: 133 PTPKTFAILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNL 192

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK  RGRFK D +SYNI+ANG+CL K+TP AL+V++EM+ERG++PT+ TYN LLKGYFR 
Sbjct: 193 FKTLRGRFKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRC 252

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQ+ E WEFFL+MKKRK EID
Sbjct: 253 GQLNEAWEFFLEMKKRKCEID 273


>gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]
          Length = 521

 Score =  283 bits (725), Expect = 2e-74
 Identities = 127/201 (63%), Positives = 161/201 (80%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LK+LWNHGPKALQFF  L+ HP+Y H+            RLRD++T WTLV +MRS ++G
Sbjct: 65  LKKLWNHGPKALQFFKTLDYHPNYAHAASSFDNVIDIAGRLRDFQTVWTLVARMRSRRIG 124

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P+PKTFAII ERYVSAGK+D+A+K+FLSM EHGC QDLNSFN+ L VLCKS R EMA+  
Sbjct: 125 PSPKTFAIIAERYVSAGKSDRAIKVFLSMREHGCSQDLNSFNSVLDVLCKSGRVEMAHNF 184

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           F+ +R  F+ D +SYN+IANG+CL K+TP+ALEV+ +M++RG  P+L TYNI+LKGYFRA
Sbjct: 185 FRAYRRNFRVDTVSYNVIANGWCLIKKTPKALEVLEDMVKRGFSPSLITYNIMLKGYFRA 244

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQ+KE WEFF +MK+RK+EID
Sbjct: 245 GQVKEAWEFFGEMKRRKVEID 265



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+  K+     T+  +   +   G+  KA +IF  M   G    + 
Sbjct: 243 RAGQVKEAWEFFGEMKRRKVEIDVVTYTTLVHGFGVVGEIKKARRIFDEMVGEGVVPTVA 302

Query: 300 SFNAFLGVLCKSKRAEMAYKLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+   G+    +V +Y ++  G C   Q  R++E +  M
Sbjct: 303 TYNALIQVLCKKDSVENAVVVFEEMVGKGCVPNVTTYTVLVRGLCHAGQMERSMEFVERM 362

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G EP +  YNI+++ +   G+I++    F +M
Sbjct: 363 KGDGCEPNVQIYNIVIRYFCDDGEIEKALSVFEKM 397



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = +3

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAEMA 353
           P+  T+ I+ + Y  AG+  +A + F  M     + D+ ++   +   GV+ + K+A   
Sbjct: 229 PSLITYNIMLKGYFRAGQVKEAWEFFGEMKRRKVEIDVVTYTTLVHGFGVVGEIKKAR-- 286

Query: 354 YKLFKIFRGR-FKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKG 530
            ++F    G      V +YN +    C K     A+ V  EM+ +G  P + TY +L++G
Sbjct: 287 -RIFDEMVGEGVVPTVATYNALIQVLCKKDSVENAVVVFEEMVGKGCVPNVTTYTVLVRG 345

Query: 531 YFRAGQIKEGWEFFLQMK 584
              AGQ++   EF  +MK
Sbjct: 346 LCHAGQMERSMEFVERMK 363


>gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao] gi|508773327|gb|EOY20583.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 413

 Score =  280 bits (716), Expect = 2e-73
 Identities = 138/202 (68%), Positives = 160/202 (79%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLL-ETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LK+LWNHGPKALQFF+LL   HP+Y HS            RLR Y T +TL+ +MRS +L
Sbjct: 73  LKQLWNHGPKALQFFHLLLHNHPTYIHSVSSFDHAIDIAARLRHYATVFTLLHRMRSLRL 132

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
            PTPKTFAII ERYV+AGK DKALKIFLSMHEHGC QDL+SFN  L VLCK+KR E A  
Sbjct: 133 HPTPKTFAIIAERYVAAGKPDKALKIFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACN 192

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
            FK+ RG+FKADVISYNIIANG+CL K+T  ALE ++EM+E+GL P L TYNI+LKGYFR
Sbjct: 193 FFKVLRGKFKADVISYNIIANGWCLIKRTNMALETLKEMVEKGLTPNLTTYNIMLKGYFR 252

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQI+EGW+FFL+MKKRK EID
Sbjct: 253 AGQIEEGWKFFLEMKKRKCEID 274



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
 Frame = +3

Query: 144 WTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGV 323
           W    +M+  K      T+  +      AG+  +A K+F  M   G    + ++NA + V
Sbjct: 260 WKFFLEMKKRKCEIDVVTYTTVVHGLGVAGEIKRARKVFDEMVREGVLPSVATYNALIQV 319

Query: 324 LCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPT 500
           LCK    E A  +F+ + R  +  +  +YN++  G C K+Q  RA+E M +M +    P 
Sbjct: 320 LCKKDCVENAILVFEEMLRKGYVPNSTTYNVVIRGLCHKEQMDRAIEFMDKMRDDECGPN 379

Query: 501 LATYNILLKGYFRAGQIKEGWEFFLQM 581
           + TYNI+++ +  AG+I++G E F +M
Sbjct: 380 VQTYNIVIRYFCDAGEIEKGLELFQKM 406



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
 Frame = +3

Query: 159 KMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAF---LGVLC 329
           +M    L P   T+ I+ + Y  AG+ ++  K FL M +  C+ D+ ++      LGV  
Sbjct: 230 EMVEKGLTPNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVTYTTVVHGLGVAG 289

Query: 330 KSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLAT 509
           + KRA   +   ++ R      V +YN +    C K     A+ V  EM+ +G  P   T
Sbjct: 290 EIKRARKVFD--EMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEMLRKGYVPNSTT 347

Query: 510 YNILLKGYFRAGQIKEGWEFFLQMK 584
           YN++++G     Q+    EF  +M+
Sbjct: 348 YNVVIRGLCHKEQMDRAIEFMDKMR 372


>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 491

 Score =  280 bits (716), Expect = 2e-73
 Identities = 138/202 (68%), Positives = 160/202 (79%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLL-ETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LK+LWNHGPKALQFF+LL   HP+Y HS            RLR Y T +TL+ +MRS +L
Sbjct: 73  LKQLWNHGPKALQFFHLLLHNHPTYIHSVSSFDHAIDIAARLRHYATVFTLLHRMRSLRL 132

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
            PTPKTFAII ERYV+AGK DKALKIFLSMHEHGC QDL+SFN  L VLCK+KR E A  
Sbjct: 133 HPTPKTFAIIAERYVAAGKPDKALKIFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACN 192

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
            FK+ RG+FKADVISYNIIANG+CL K+T  ALE ++EM+E+GL P L TYNI+LKGYFR
Sbjct: 193 FFKVLRGKFKADVISYNIIANGWCLIKRTNMALETLKEMVEKGLTPNLTTYNIMLKGYFR 252

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQI+EGW+FFL+MKKRK EID
Sbjct: 253 AGQIEEGWKFFLEMKKRKCEID 274



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
 Frame = +3

Query: 144 WTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGV 323
           W    +M+  K      T+  +      AG+  +A K+F  M   G    + ++NA + V
Sbjct: 260 WKFFLEMKKRKCEIDVVTYTTVVHGLGVAGEIKRARKVFDEMVREGVLPSVATYNALIQV 319

Query: 324 LCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPT 500
           LCK    E A  +F+ + R  +  +  +YN++  G C K+Q  RA+E M +M +    P 
Sbjct: 320 LCKKDCVENAILVFEEMLRKGYVPNSTTYNVVIRGLCHKEQMDRAIEFMDKMRDDECGPN 379

Query: 501 LATYNILLKGYFRAGQIKEGWEFFLQM 581
           + TYNI+++ +  AG+I++G E F +M
Sbjct: 380 VQTYNIVIRYFCDAGEIEKGLELFQKM 406



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
 Frame = +3

Query: 159 KMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAF---LGVLC 329
           +M    L P   T+ I+ + Y  AG+ ++  K FL M +  C+ D+ ++      LGV  
Sbjct: 230 EMVEKGLTPNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVTYTTVVHGLGVAG 289

Query: 330 KSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLAT 509
           + KRA   +   ++ R      V +YN +    C K     A+ V  EM+ +G  P   T
Sbjct: 290 EIKRARKVFD--EMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEMLRKGYVPNSTT 347

Query: 510 YNILLKGYFRAGQIKEGWEFFLQMK 584
           YN++++G     Q+    EF  +M+
Sbjct: 348 YNVVIRGLCHKEQMDRAIEFMDKMR 372


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  273 bits (697), Expect = 3e-71
 Identities = 126/201 (62%), Positives = 153/201 (76%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKAL FF +L  HPSY H             RLRD++T W LV +MRS +LG
Sbjct: 65  LKRLWNHGPKALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLG 124

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           P+P+TFAII ERY + GK  +A+ +F+SMHE+GC QDL+SFN  L VLCKSKR EMAY L
Sbjct: 125 PSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNL 184

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK  +G+FKAD +SYNII NG+CL K+TP+ALE+++EM+ERGL P L TYNI+L GYFRA
Sbjct: 185 FKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRA 244

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQ  E W FFL+MKKRK +ID
Sbjct: 245 GQTNEAWGFFLEMKKRKCDID 265



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
 Frame = +3

Query: 144 WTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGV 323
           W    +M+  K      T+  +       G+  +A  +F  M + G    + +FNA + +
Sbjct: 251 WGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQI 310

Query: 324 LCKSKRAEMAYKLFK--IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEP 497
           LCK    E A  +F+  + RG +  + I+YN++  G C   +  RA+E+M  M +   EP
Sbjct: 311 LCKKDSVENAILIFEEMVKRG-YVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEP 369

Query: 498 TLATYNILLKGYFRAGQIKEGWEFFLQM 581
            + TYNIL++ +  AG+I++G + F +M
Sbjct: 370 NVQTYNILIRYFCDAGEIEKGLDLFQKM 397



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAF---LGVLCKSKRAE 347
           L P   T+ I+   Y  AG+ ++A   FL M +  C  D+ ++ +    LGV+ + KRA 
Sbjct: 227 LTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRAR 286

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +   ++ +      V ++N +    C K     A+ +  EM++RG  P   TYN++++
Sbjct: 287 NVFN--QMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIR 344

Query: 528 GYFRAGQIKEGWEFFLQMK 584
           G    G+++   E   +M+
Sbjct: 345 GLCHVGEMQRAMELMERME 363


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score =  269 bits (688), Expect = 4e-70
 Identities = 127/201 (63%), Positives = 155/201 (77%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWN GPKALQFFNLL  HPSY H             RLRD  +  +LV +MRS++LG
Sbjct: 74  LKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLG 133

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PTPKTFAII ERY SAGK  +A+K+FLSMH+ GC QDL SFN  L VLCKSKR EMAY L
Sbjct: 134 PTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNL 193

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
           FK+F+G+F+AD +SYN++ NG+CL K+T +ALE+++EM++RGL P L +YN +LKGYFRA
Sbjct: 194 FKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRA 253

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
           GQI E W+FFL+MKKR  EID
Sbjct: 254 GQINEAWDFFLEMKKRDCEID 274



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = +3

Query: 144 WTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGV 323
           W    +M+         T+  +   +  AG+  +A K+F +M + G    + ++NAF+ V
Sbjct: 260 WDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQV 319

Query: 324 LCKSKRAEMAYKLFK--IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEP 497
           LCK    + A  +F+  + +G +  + I+YN++  G C + +  RA+E M  M + G EP
Sbjct: 320 LCKKDNVDNAIVIFEEMVVKG-YVPNSITYNLVIRGLCHRGEMERAMEFMGRMRDDGCEP 378

Query: 498 TLATYNILLKGYFRAGQIKEGWEFFLQM 581
            + TYN++++ +   G+I +  + F +M
Sbjct: 379 NVQTYNLVIRYFCDEGEIDKALDLFQKM 406



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           L P   ++  + + Y  AG+ ++A   FL M +  C+ D+ ++   +   GV  + KRA 
Sbjct: 236 LTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRAR 295

Query: 348 MAYKLFKIFRGRFKADVI----SYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYN 515
                 K+F    K  V+    +YN      C K     A+ +  EM+ +G  P   TYN
Sbjct: 296 ------KVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYN 349

Query: 516 ILLKGYFRAGQIKEGWEFFLQMK 584
           ++++G    G+++   EF  +M+
Sbjct: 350 LVIRGLCHRGEMERAMEFMGRMR 372


>gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score =  266 bits (680), Expect = 3e-69
 Identities = 124/201 (61%), Positives = 150/201 (74%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHPSYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKLG 182
           LKRLWNHGPKALQFF  L+ HPSY H             R+ DY   W LV +MRS + G
Sbjct: 73  LKRLWNHGPKALQFFKHLDRHPSYIHCSSSFDHAVDIAARMHDYNAAWALVGRMRSLRRG 132

Query: 183 PTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYKL 362
           PT +TFAI+ ERY + GK  + ++ FLSMHEHGC+QDLNSFN  L VLCKSKR EMA+ L
Sbjct: 133 PTHRTFAILGERYAANGKPHRTVRTFLSMHEHGCRQDLNSFNTVLDVLCKSKRVEMAHTL 192

Query: 363 FKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFRA 542
            K FR RF+ D +SYNIIANG+CL K+TP AL+V++EM++RG+ PT+ TYN LLKGYFR+
Sbjct: 193 LKTFRSRFRLDSVSYNIIANGYCLIKRTPMALQVLKEMVQRGINPTMITYNTLLKGYFRS 252

Query: 543 GQIKEGWEFFLQMKKRKIEID 605
            QIKE WEF+L+MKKRK EID
Sbjct: 253 SQIKEAWEFYLEMKKRKCEID 273



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+  K      T+  +   +  AG+  K+ ++F  M + G    + 
Sbjct: 251 RSSQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGEVKKSRRVFDEMVKEGVAPSVA 310

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK--IFRGRFKADVISYNIIANGFCLKKQTPRALEVMRE 473
           + NA + VLCK    E A  +F+  + +G    ++++YN++  GFC      RAL  M  
Sbjct: 311 TCNALIQVLCKKDSVESAVVVFEEMVRKGLCVPNLVTYNVVIRGFCHVGDMERALGFMGR 370

Query: 474 MIERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQMK 584
           M E GL  ++ TYN++++ +  AG+I++G E F +MK
Sbjct: 371 MGEHGLRASVQTYNVVIRYFCDAGEIEKGLEMFGKMK 407


>ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutrema salsugineum]
           gi|557086807|gb|ESQ27659.1| hypothetical protein
           EUTSA_v10018527mg [Eutrema salsugineum]
          Length = 454

 Score =  266 bits (680), Expect = 3e-69
 Identities = 125/202 (61%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHP-SYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LKRLWNHGPKALQFF+LL+ H   Y H             RL  Y T W+L+ +MRS +L
Sbjct: 64  LKRLWNHGPKALQFFHLLDRHHREYVHVASSFDLAIDIAARLHLYTTVWSLIRRMRSLRL 123

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
           GP+PKTFAI+ ERY SAGK DKA+ +FL+MHEHGC QDL SFN  L VLCKSKR E A++
Sbjct: 124 GPSPKTFAIVAERYASAGKPDKAVNLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAHE 183

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           LF+  RGRF  D ++YN+I NG+CL K+TP+ALEV++EM+ERG+ P L TYN +LKG+FR
Sbjct: 184 LFRALRGRFSVDTVTYNVIVNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 243

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQIK+ WEFFL+MKKR  EID
Sbjct: 244 AGQIKQAWEFFLEMKKRNCEID 265



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           + P   T+  + + +  AG+  +A + FL M +  C+ D+ ++   +   GV  + KRA 
Sbjct: 227 INPNLTTYNTMLKGFFRAGQIKQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRAR 286

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +   ++ R      V ++N +    C K     A+ +  EM+ +G EP + TYN+L++
Sbjct: 287 NVFD--EMIREGVLPSVATHNALIQVLCKKDSVENAIVMFEEMLRKGYEPNVTTYNVLIR 344

Query: 528 GYFRAGQIKEGWEFFLQMKKRKIE 599
           G F AG    G E   +MK    E
Sbjct: 345 GLFHAGDFSRGEELMKRMKNEGCE 368



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    K  W    +M+         T+  +   +  AG+  +A  +F  M   G    + 
Sbjct: 243 RAGQIKQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 302

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           + NA + VLCK    E A  +F+ + R  ++ +V +YN++  G        R  E+M+ M
Sbjct: 303 THNALIQVLCKKDSVENAIVMFEEMLRKGYEPNVTTYNVLIRGLFHAGDFSRGEELMKRM 362

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G EP   TYN++++ Y    ++++    F +M
Sbjct: 363 KNEGCEPNFQTYNMMIRYYSECSEVEKALALFEKM 397


>ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Capsella rubella]
           gi|482570383|gb|EOA34571.1| hypothetical protein
           CARUB_v10022126mg [Capsella rubella]
          Length = 451

 Score =  266 bits (680), Expect = 3e-69
 Identities = 124/202 (61%), Positives = 156/202 (77%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHP-SYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LKRLWNHGPKALQFF+ L+TH  SY H             RL  + T W+L+ +MRS ++
Sbjct: 61  LKRLWNHGPKALQFFHFLDTHHRSYVHHASSFDLAIDIAARLHLHPTVWSLLHRMRSLRI 120

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
           GP+PKTFAI+ ER+ S+GK DKA+K+FL+MHEHGC QDL SFN  L VLCKSKR E AY+
Sbjct: 121 GPSPKTFAIVAERFASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 180

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           LF+  RGRF AD ++YN+I NG+CL K+TP+ALEV++EM+ERG++P L TYN +LKG+FR
Sbjct: 181 LFRALRGRFGADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGIDPNLTTYNTMLKGFFR 240

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQI+  WEFFL+MKKR  EID
Sbjct: 241 AGQIRHAWEFFLEMKKRNCEID 262



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           + P   T+  + + +  AG+   A + FL M +  C+ D+ ++   +   GV  + KRA 
Sbjct: 224 IDPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRAR 283

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +   ++ R      V +YN +    C K     A+ +  +M+ +G EP + TYN+L++
Sbjct: 284 NVFD--EMIREGVLPSVATYNAMIQVLCKKDCVENAVVMFEDMVRKGYEPNVTTYNVLIR 341

Query: 528 GYFRAGQIKEGWEFFLQMK 584
           G F AG+   G E   +M+
Sbjct: 342 GLFHAGKFSRGEELMQRME 360



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    +  W    +M+         T+  +   +  AG+  +A  +F  M   G    + 
Sbjct: 240 RAGQIRHAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 299

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+ + R  ++ +V +YN++  G     +  R  E+M+ M
Sbjct: 300 TYNAMIQVLCKKDCVENAVVMFEDMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRM 359

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G +P   TYN++++ Y    +I +    F +M
Sbjct: 360 ENEGCKPNFQTYNMMIRYYSECSEIDKALCLFGKM 394


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  264 bits (675), Expect = 1e-68
 Identities = 123/202 (60%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHP-SYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LKRLWNHGPKALQFF+ L+ H   Y H             RL  + T W+L+ +MRS ++
Sbjct: 63  LKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRI 122

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
           GP+PKTFAI+ ERY SAGK DKA+K+FL+MHEHGC QDL SFN  L VLCKSKR E AY+
Sbjct: 123 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 182

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           LF+  RGRF  D ++YN+I NG+CL K+TP+ALEV++EM+ERG+ P L TYN +LKG+FR
Sbjct: 183 LFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQI+  WEFFL+MKKR  EID
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEID 264



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           + P   T+  + + +  AG+   A + FL M +  C+ D+ ++   +   GV  + KRA 
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +   ++ R      V +YN +    C K     A+ +  EM+ RG EP + TYN+L++
Sbjct: 286 NVFD--EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343

Query: 528 GYFRAGQIKEGWEFFLQMKKRKIE 599
           G F AG+   G E   +M+    E
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCE 367



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    +  W    +M+         T+  +   +  AG+  +A  +F  M   G    + 
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+ + R  ++ +V +YN++  G     +  R  E+M+ M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G EP   TYN++++ Y    ++++    F +M
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396


>ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis
           thaliana] gi|332197524|gb|AEE35645.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 453

 Score =  264 bits (675), Expect = 1e-68
 Identities = 123/202 (60%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHP-SYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LKRLWNHGPKALQFF+ L+ H   Y H             RL  + T W+L+ +MRS ++
Sbjct: 63  LKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRI 122

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
           GP+PKTFAI+ ERY SAGK DKA+K+FL+MHEHGC QDL SFN  L VLCKSKR E AY+
Sbjct: 123 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 182

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           LF+  RGRF  D ++YN+I NG+CL K+TP+ALEV++EM+ERG+ P L TYN +LKG+FR
Sbjct: 183 LFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQI+  WEFFL+MKKR  EID
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEID 264



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           + P   T+  + + +  AG+   A + FL M +  C+ D+ ++   +   GV  + KRA 
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +   ++ R      V +YN +    C K     A+ +  EM+ RG EP + TYN+L++
Sbjct: 286 NVFD--EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343

Query: 528 GYFRAGQIKEGWEFFLQMKKRKIE 599
           G F AG+   G E   +M+    E
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCE 367



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    +  W    +M+         T+  +   +  AG+  +A  +F  M   G    + 
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NA + VLCK    E A  +F+ + R  ++ +V +YN++  G     +  R  E+M+ M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G EP   TYN++++ Y    ++++    F +M
Sbjct: 362 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396


>ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333405|gb|EFH63823.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  264 bits (674), Expect = 2e-68
 Identities = 121/202 (59%), Positives = 154/202 (76%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3   LKRLWNHGPKALQFFNLLETHP-SYRHSXXXXXXXXXXXXRLRDYKTTWTLVCKMRSSKL 179
           LKRLWNHGPKALQFF+ L+ H   Y H             RL  + T W+L+ +MRS ++
Sbjct: 61  LKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHRMRSLRI 120

Query: 180 GPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFLGVLCKSKRAEMAYK 359
           GP+PKTFAI+ ERY S+GK DKA+K+FL+MHEHGC QDL SFN  L VLCKSKR E AY+
Sbjct: 121 GPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 180

Query: 360 LFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLKGYFR 539
           LF+  RGRF AD ++YN+I NG+CL K+TP+ALEV++EM++RG+ P L TYN +L+G+FR
Sbjct: 181 LFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFR 240

Query: 540 AGQIKEGWEFFLQMKKRKIEID 605
           AGQI++ WEFFL+MKKR  EID
Sbjct: 241 AGQIRQAWEFFLEMKKRNCEID 262



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
 Frame = +3

Query: 177 LGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLNSFNAFL---GVLCKSKRAE 347
           + P   T+  + + +  AG+  +A + FL M +  C+ D+ ++   +   GV  + KR  
Sbjct: 224 INPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTR 283

Query: 348 MAYKLFKIFRGRFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEPTLATYNILLK 527
             +   ++ R      V +YN      C K     A+ +  EM+ +G EP + TYN+L++
Sbjct: 284 NVFD--EMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIR 341

Query: 528 GYFRAGQIKEGWEFFLQMKKRKIE 599
           G F AG+   G E   +M+    E
Sbjct: 342 GLFHAGKFSRGEELMQRMENEGCE 365



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 RLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLSMHEHGCQQDLN 299
           R    +  W    +M+         T+  +   +  AG+  +   +F  M   G    + 
Sbjct: 240 RAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVA 299

Query: 300 SFNAFLGVLCKSKRAEMAYKLFK-IFRGRFKADVISYNIIANGFCLKKQTPRALEVMREM 476
           ++NAF+ VLCK    E A  +F+ + R  ++ +V +YN++  G     +  R  E+M+ M
Sbjct: 300 TYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRM 359

Query: 477 IERGLEPTLATYNILLKGYFRAGQIKEGWEFFLQM 581
              G EP   TYN++++ Y    ++++    F +M
Sbjct: 360 ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 394