BLASTX nr result
ID: Rehmannia22_contig00013489
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00013489
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li... 135 7e-30
gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao... 135 7e-30
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V... 134 1e-29
ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-li... 134 2e-29
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li... 134 2e-29
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li... 133 2e-29
ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, part... 133 2e-29
gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus pe... 133 2e-29
ref|XP_002509739.1| replication factor C / DNA polymerase III ga... 133 2e-29
emb|CAA06481.1| replication factor C/activator 1 subunit [Cicer ... 133 2e-29
gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis] 132 4e-29
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr... 132 4e-29
ref|XP_002304476.1| replication factor C 40 kDa family protein [... 132 5e-29
ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-li... 132 6e-29
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li... 132 6e-29
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A... 131 1e-28
ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-li... 130 2e-28
ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arab... 130 2e-28
ref|XP_006477417.1| PREDICTED: replication factor C subunit 2-li... 130 2e-28
gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus... 130 2e-28
>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 331
Score = 135 bits (339), Expect = 7e-30
Identities = 66/82 (80%), Positives = 68/82 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFAHMRICDGVG
Sbjct: 250 GKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGVG 309
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VRETAKAA
Sbjct: 310 SYLQMCGLLAKLSLVRETAKAA 331
>gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao]
gi|508777388|gb|EOY24644.1| Replication factor C 2
isoform 1 [Theobroma cacao]
Length = 332
Score = 135 bits (339), Expect = 7e-30
Identities = 66/82 (80%), Positives = 68/82 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
G+FDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VRETAKAA
Sbjct: 311 SYLQLCGLLAKFSLVRETAKAA 332
>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 134 bits (337), Expect = 1e-29
Identities = 66/81 (81%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 249 GKFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 308
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRETAKA
Sbjct: 309 SYLQLCGLLAKLAVVRETAKA 329
>ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-like [Solanum
lycopersicum]
Length = 331
Score = 134 bits (336), Expect = 2e-29
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFAHMRICDGVG
Sbjct: 250 GKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGVG 309
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VRETAKA+
Sbjct: 310 SYLQMCGLLAKLSLVRETAKAS 331
>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
gi|449494241|ref|XP_004159490.1| PREDICTED: replication
factor C subunit 2-like [Cucumis sativus]
Length = 331
Score = 134 bits (336), Expect = 2e-29
Identities = 65/81 (80%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC GL++LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 250 GKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 309
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRETAKA
Sbjct: 310 SYLQLCGLLAKLSMVRETAKA 330
>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
Length = 332
Score = 133 bits (335), Expect = 2e-29
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
G FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VRETAKAA
Sbjct: 311 SYLQMCGLLAKLSLVRETAKAA 332
>ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, partial [Capsella rubella]
gi|482571159|gb|EOA35347.1| hypothetical protein
CARUB_v10020535mg, partial [Capsella rubella]
Length = 360
Score = 133 bits (335), Expect = 2e-29
Identities = 66/81 (81%), Positives = 67/81 (82%)
Frame = +3
Query: 6 KFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGS 185
KFDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGS
Sbjct: 280 KFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 339
Query: 186 YXXXXXXXXXXXXVRETAKAA 248
Y VRETAKAA
Sbjct: 340 YLQLCGLLAKLAIVRETAKAA 360
>gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
Length = 332
Score = 133 bits (335), Expect = 2e-29
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY +RETAKA
Sbjct: 311 SYLQLCGLLAKLSLIRETAKA 331
>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223549638|gb|EEF51126.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 333
Score = 133 bits (335), Expect = 2e-29
Identities = 64/82 (78%), Positives = 69/82 (84%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GK+DDAC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 252 GKYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VR+TA+AA
Sbjct: 312 SYLQLCGLLAKLALVRDTARAA 333
>emb|CAA06481.1| replication factor C/activator 1 subunit [Cicer arietinum]
Length = 166
Score = 133 bits (335), Expect = 2e-29
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
G FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 85 GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 144
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VRETAKAA
Sbjct: 145 SYLQMCGLLAKLSLVRETAKAA 166
>gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]
Length = 330
Score = 132 bits (333), Expect = 4e-29
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKL+FMKETGFAHMRICDGVG
Sbjct: 249 GKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLQFMKETGFAHMRICDGVG 308
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRETAKA
Sbjct: 309 SYLQLCGLLAKLSLVRETAKA 329
>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
gi|557088282|gb|ESQ29062.1| hypothetical protein
EUTSA_v10023584mg [Eutrema salsugineum]
Length = 333
Score = 132 bits (333), Expect = 4e-29
Identities = 65/81 (80%), Positives = 67/81 (82%)
Frame = +3
Query: 6 KFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGS 185
KFDDAC G+K+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGS
Sbjct: 253 KFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 312
Query: 186 YXXXXXXXXXXXXVRETAKAA 248
Y VRETAKAA
Sbjct: 313 YLQLCGLLAKLAVVRETAKAA 333
>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
family protein [Populus trichocarpa]
Length = 330
Score = 132 bits (332), Expect = 5e-29
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC+GLK LYD+GYSPTDIITTLFRIIKNYDM EY+KLEFMKETGFAHMRICDGVG
Sbjct: 249 GKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVG 308
Query: 183 SYXXXXXXXXXXXXVRETAKAA 248
SY VR+TA+AA
Sbjct: 309 SYLQLCGLLAKLALVRDTARAA 330
>ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 332
Score = 132 bits (331), Expect = 6e-29
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
G FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 251 GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRETAKA
Sbjct: 311 SYLQLCGLLAKLSLVRETAKA 331
>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 331
Score = 132 bits (331), Expect = 6e-29
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
G FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 250 GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 309
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRETAKA
Sbjct: 310 SYLQLCGLLAKLSLVRETAKA 330
>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
gi|548861950|gb|ERN19315.1| hypothetical protein
AMTR_s00069p00063160 [Amborella trichopoda]
Length = 331
Score = 131 bits (329), Expect = 1e-28
Identities = 63/81 (77%), Positives = 68/81 (83%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKF++AC+GLK+LYDLGYSPTDIITTLFRIIKNYDMPEYLKLEF+KETGFAHMRICDGVG
Sbjct: 250 GKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFAHMRICDGVG 309
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
S VRETAKA
Sbjct: 310 SLLQLCGLLAKLSRVRETAKA 330
>ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-like [Fragaria vesca
subsp. vesca]
Length = 329
Score = 130 bits (327), Expect = 2e-28
Identities = 62/81 (76%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC+GLK+LYD+GYSPTDIITT FRIIKNYDM E+LKLEFMKETGFAHMRICDGVG
Sbjct: 248 GKFDDACSGLKQLYDMGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGVG 307
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VR+TAKA
Sbjct: 308 SYLQLCGLLAKLSLVRDTAKA 328
>ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arabidopsis lyrata subsp.
lyrata] gi|297332271|gb|EFH62689.1| hypothetical protein
ARALYDRAFT_475032 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 130 bits (327), Expect = 2e-28
Identities = 64/80 (80%), Positives = 65/80 (81%)
Frame = +3
Query: 6 KFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGS 185
KFDDAC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGS
Sbjct: 254 KFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 313
Query: 186 YXXXXXXXXXXXXVRETAKA 245
Y RETAKA
Sbjct: 314 YLQLCGLLAKLSIARETAKA 333
>ref|XP_006477417.1| PREDICTED: replication factor C subunit 2-like [Citrus sinensis]
Length = 331
Score = 130 bits (326), Expect = 2e-28
Identities = 63/81 (77%), Positives = 67/81 (82%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
GKFDDAC+GLK+LYDLGYSPTDIITTLFRIIKNY+M E+LKLEFMKE GFAHMRICDGVG
Sbjct: 250 GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYEMAEHLKLEFMKEAGFAHMRICDGVG 309
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRETAKA
Sbjct: 310 SYLQLCGLLAKLSIVRETAKA 330
>gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
Length = 330
Score = 130 bits (326), Expect = 2e-28
Identities = 63/81 (77%), Positives = 66/81 (81%)
Frame = +3
Query: 3 GKFDDACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVG 182
G FD+AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVG
Sbjct: 249 GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 308
Query: 183 SYXXXXXXXXXXXXVRETAKA 245
SY VRE AKA
Sbjct: 309 SYLQLCGLLAKLSLVRENAKA 329