BLASTX nr result
ID: Rehmannia22_contig00013289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00013289
(3250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 276 9e-85
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 264 6e-83
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 250 9e-79
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 264 6e-77
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 264 6e-77
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 265 3e-76
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 274 4e-76
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 267 2e-75
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 259 2e-75
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 232 2e-75
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea] 245 4e-74
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 286 5e-74
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 249 1e-73
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 249 1e-73
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 225 3e-73
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 242 5e-73
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 242 3e-72
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 248 4e-72
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 242 4e-72
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 250 4e-72
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 276 bits (705), Expect(2) = 9e-85
Identities = 154/435 (35%), Positives = 237/435 (54%), Gaps = 1/435 (0%)
Frame = -3
Query: 1304 GRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRF 1125
G R SSC F+ + + + ++ +SG+ F+W NR E V+ LD+ A+ W F
Sbjct: 149 GPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGNRNDE-LVQCRLDRTVANQAWMELF 207
Query: 1124 KDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQKGT 945
AK ++ + SDH L + F +D+RW Q EG ++ N W Q T
Sbjct: 208 PQAKATYLQKICSDHSPLINNLVGDNWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKT 267
Query: 944 QFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTS-LGSNRNWDDWKRIKGE 768
++ KI R ++ W + +K +S +I L +++ T + +R + R+K E
Sbjct: 268 NALMME-KIASCRREISKWKRVSKPSSAVRIQELQFKLDAATKQIPFDRR--ELARLKKE 324
Query: 767 LHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQEL 588
L + Y EE +W+ KSR W+R GDRNTK+FHA T R+ +N I +L+ EG S E
Sbjct: 325 LSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDED 384
Query: 587 IEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHPHK 408
+ + +++K LF++ + L L + D + +L+ P E+++A F ++PHK
Sbjct: 385 LGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHK 444
Query: 407 APGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIAHF 228
PGPDGM FW + I ++V+ FF + + + +N T + LIPK+ + F
Sbjct: 445 CPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDF 504
Query: 227 RPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHNLR 48
RPISLCNV YK+I K++ANRLK L ISE Q AFVKGR ISDNI++AHE H + +
Sbjct: 505 RPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNN 564
Query: 47 RGSRGFMALKLDMSK 3
+ S F+A+K D+SK
Sbjct: 565 KCSEEFIAIKTDISK 579
Score = 68.2 bits (165), Expect(2) = 9e-85
Identities = 36/145 (24%), Positives = 65/145 (44%)
Frame = -1
Query: 1735 SWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGL 1556
SWNC+G+G T+ ++EI + P +FL E + V+PIG
Sbjct: 5 SWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPIGK 64
Query: 1555 SGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQWDYFIQNK 1376
SGGL + W V + + + ++ + + + ++ +YG R W+ +
Sbjct: 65 SGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYLTCIYGEPVQAERGELWERLTRLG 124
Query: 1375 SKWGNLWIMGGDWNDIICPDEKRGG 1301
W++ GD+N+++ P EK GG
Sbjct: 125 LSRSGPWMLTGDFNELVDPSEKIGG 149
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 264 bits (674), Expect(2) = 6e-83
Identities = 146/437 (33%), Positives = 231/437 (52%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
KK GR+RS+ S F N I MK L G+P++W R E +E LD+ F + +W
Sbjct: 508 KKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQNET-IESCLDRVFINSDWQ 566
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQ 954
F + +P SDH + + +F +D+R Q E V+ W +
Sbjct: 567 ASFPAFETEFLPIAGSDHAPVIIDIAEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWN-RG 625
Query: 953 KGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIK 774
+ K+ R +L W + K N+ ++I L +++ R++
Sbjct: 626 RSDSHGGYYEKLHCCRQELAKWKRRTKTNTAEKIETLKYRVD-AAERDHTLPHQTILRLR 684
Query: 773 GELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQ 594
+L++AY EELYW KSRN+W+ GDRNT FF+A T R+ RN I + +G+
Sbjct: 685 QDLNQAYRDEELYWHLKSRNRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRD 744
Query: 593 ELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHP 414
+ I K +++ DLF+T+ +I+ G+ + + + L++ D E++ A+F +
Sbjct: 745 DTIGKVAENYFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGA 804
Query: 413 HKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIA 234
+APG DG TA W ++ D+C +V+ FF + M +N T + LIPK+ +P ++
Sbjct: 805 DRAPGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMS 864
Query: 233 HFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHN 54
+RPISLC +YKIISKIL RLK CL IS+ Q AFV G++ISDN+++AHE H + +
Sbjct: 865 DYRPISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKS 924
Query: 53 LRRGSRGFMALKLDMSK 3
R G++A+K D+SK
Sbjct: 925 RRECQSGYVAVKTDISK 941
Score = 73.9 bits (180), Expect(2) = 6e-83
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Frame = -1
Query: 1756 SDPTMMASWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWY 1577
+ P + WNC+GLG P T+ +++E+ R + + +FL E K G
Sbjct: 360 TSPMRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLG-VKMGFEDM 418
Query: 1576 CV-DPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQ 1400
C+ P GLSGGL+V+W + + + + +++ N ++ +YG R+
Sbjct: 419 CIISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFYLSCIYGHPIPSERHHL 478
Query: 1399 WDYFIQNKSKWGNLWIMGGDWNDIICPDEKRGGGR 1295
W+ + + W+M GD+N+I+ +EK+GG R
Sbjct: 479 WEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRR 513
Score = 60.8 bits (146), Expect = 4e-06
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Frame = -3
Query: 3101 IARSSDECTRSLFGAIHGAKKANFAGLKSTMNHIWPIQDTFILREIGLNRFQFVFKTKED 2922
+ R+ D+ L G + N + +T+ W + R I RFQF+F ++E
Sbjct: 28 VQRAVDDNRFCLLGRPLMPRNQNLRQILTTVPRTWGLVGFVRGRIIQNRRFQFIFPSEES 87
Query: 2921 KCKDFKNRTWVFDNQFLILKEWVESNGQQELDFNIVDVWIQIWDLPHNWISTETGIRIGK 2742
+ W F ++ L+++ W L N + WIQ+ ++P +++ E I
Sbjct: 88 LDTVLRRGPWSFADRMLVVERWTPD--MDPLVLNFIPFWIQVREIPLQFLNLEVIDNIAG 145
Query: 2741 MFPSMSDIYIPESGSIKGRHIKLLVAINLNKPLLRGASIKLG-GVAKWVNFKYEKMVGFC 2565
+ + + +++ + ++N PL + + GV ++F YE++ GFC
Sbjct: 146 SLGERKAVDFDPFTTTRVEFVRIQIKWDVNHPLRFQRNYQFSLGVNTVLSFYYERLRGFC 205
Query: 2564 FYCGFVGH 2541
CG + H
Sbjct: 206 DVCGRMTH 213
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 250 bits (638), Expect(2) = 9e-79
Identities = 155/440 (35%), Positives = 236/440 (53%), Gaps = 7/440 (1%)
Frame = -3
Query: 1301 RQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRFK 1122
R+RS F++ + + L + G FTWSN + + LD+ A+ E+ F+
Sbjct: 156 RERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFE 215
Query: 1121 DAKVLHIPRFSSDHXXXXXXLY-----PHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQ 957
D V ++ SSDH L ++ QQ F F+ W + E VVEN+W
Sbjct: 216 DCLVENVITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRIS 275
Query: 956 QKGTQFFQ-IQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNW-DDWK 783
G + + + +++ + L W K + + ++I + ++++L N + K
Sbjct: 276 SAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEK 335
Query: 782 RIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLC 603
I+ +L E + KEE+ + +SR WLREGDRNT FFHA R++ N I +LV +G C
Sbjct: 336 LIEQQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRC 395
Query: 602 DSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFD 423
SQE I++ FY++LFS+ ++ ++L +P + DF + L K + EIK ALF
Sbjct: 396 ISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQ 455
Query: 422 LHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPT 243
+ KAPGPDG A W ++ IC V+ F ++ + L ++V LIPKV N +
Sbjct: 456 MGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIPKVNNAS 515
Query: 242 SIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHH 63
++ FRPISLCNV YKI SK+LANRLK L +SE Q+AFV GR I+D+ ++A+EC H
Sbjct: 516 HLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHT 575
Query: 62 IHNLRRGSRGFMALKLDMSK 3
I + F ALK+DM K
Sbjct: 576 IRK-QHNKNPFFALKIDMMK 594
Score = 73.9 bits (180), Expect(2) = 9e-79
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Frame = -1
Query: 1753 DPTMMASW--NCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRW 1580
+P + +W NCRGLG +T+ +++ + +S P+ VFLSE
Sbjct: 2 EPNKLVTWGRNCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGS 61
Query: 1579 YCVDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVI-FVYGSVDSGIRNS 1403
+ V GLSGGL +FW V S +++ + W I FVYG +R+
Sbjct: 62 FAVSCEGLSGGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPPWRISFVYGEPKRELRHF 121
Query: 1402 QWDYFIQNKSKWGNLWIMGGDWNDIICPDEKRG 1304
W+ + +W W+ GD+N+++C DE G
Sbjct: 122 FWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLG 154
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 264 bits (675), Expect(2) = 6e-77
Identities = 156/440 (35%), Positives = 237/440 (53%), Gaps = 3/440 (0%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
K G +RS C F I+ ++ ++ G+ FTW+ R G+ +++ LD+ F + EWF
Sbjct: 109 KNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWF 167
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQ 954
F + + SDH L + + +F FD+R+ E + + W +
Sbjct: 168 CFFPVSNQTFLDFRGSDHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGK 227
Query: 953 KGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRI- 777
GT + +++ R L SW K N NS +IN L +E SL W ++R+
Sbjct: 228 HGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLV----WPIFQRVS 282
Query: 776 --KGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLC 603
K +L +AY +EE YWK KSR +WLR G+RN+K+FHA Q ++R I++L G +
Sbjct: 283 VLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQ 342
Query: 602 DSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFD 423
S+ + +++ +LF +S+P D GL + + + L+ EIK+A+F
Sbjct: 343 TSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFS 402
Query: 422 LHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPT 243
+ P APGPDGM+A +W V + VK+FFA+ M N+T + LIPK ++PT
Sbjct: 403 IKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPT 462
Query: 242 SIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHH 63
+ RPISLC+V YKIISKI+A RL+ L +S+ Q+AFV R I+DNI++AHE H
Sbjct: 463 EMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHS 522
Query: 62 IHNLRRGSRGFMALKLDMSK 3
+ R S FMA+K DMSK
Sbjct: 523 LKVHPRISSEFMAVKSDMSK 542
Score = 53.5 bits (127), Expect(2) = 6e-77
Identities = 31/98 (31%), Positives = 46/98 (46%)
Frame = -1
Query: 1588 DRWYCVDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIR 1409
D+ Y V+P+G GGL + W + V V + ++ + V V VYG D R
Sbjct: 17 DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAVNFCVSCVYGDPDRSKR 76
Query: 1408 NSQWDYFIQNKSKWGNLWIMGGDWNDIICPDEKRGGGR 1295
+ W+ + + W M GD+NDI+ EK GG R
Sbjct: 77 SQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPR 114
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 264 bits (675), Expect(2) = 6e-77
Identities = 156/440 (35%), Positives = 237/440 (53%), Gaps = 3/440 (0%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
K G +RS C F I+ ++ ++ G+ FTW+ R G+ +++ LD+ F + EWF
Sbjct: 112 KNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWF 170
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQ 954
F + + SDH L + + +F FD+R+ E + + W +
Sbjct: 171 CFFPVSNQTFLDFRGSDHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGK 230
Query: 953 KGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRI- 777
GT + +++ R L SW K N NS +IN L +E SL W ++R+
Sbjct: 231 HGTNI-SVADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLV----WPIFQRVS 285
Query: 776 --KGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLC 603
K +L +AY +EE YWK KSR +WLR G+RN+K+FHA Q ++R I++L G +
Sbjct: 286 VLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQ 345
Query: 602 DSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFD 423
S+ + +++ +LF +S+P D GL + + + L+ EIK+A+F
Sbjct: 346 TSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFS 405
Query: 422 LHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPT 243
+ P APGPDGM+A +W V + VK+FFA+ M N+T + LIPK ++PT
Sbjct: 406 IKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPT 465
Query: 242 SIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHH 63
+ RPISLC+V YKIISKI+A RL+ L +S+ Q+AFV R I+DNI++AHE H
Sbjct: 466 EMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHS 525
Query: 62 IHNLRRGSRGFMALKLDMSK 3
+ R S FMA+K DMSK
Sbjct: 526 LKVHPRISSEFMAVKSDMSK 545
Score = 53.5 bits (127), Expect(2) = 6e-77
Identities = 31/98 (31%), Positives = 46/98 (46%)
Frame = -1
Query: 1588 DRWYCVDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIR 1409
D+ Y V+P+G GGL + W + V V + ++ + V V VYG D R
Sbjct: 20 DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAVNFCVSCVYGDPDRSKR 79
Query: 1408 NSQWDYFIQNKSKWGNLWIMGGDWNDIICPDEKRGGGR 1295
+ W+ + + W M GD+NDI+ EK GG R
Sbjct: 80 SQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPR 117
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 265 bits (676), Expect(2) = 3e-76
Identities = 145/437 (33%), Positives = 232/437 (53%), Gaps = 1/437 (0%)
Frame = -3
Query: 1310 KRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFV 1131
K R+RS S F+ + ++ + + G P+T+ N + V+ LD+ ASP W
Sbjct: 128 KSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSS 187
Query: 1130 RFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFC-FDQRWTQLEGISHVVENAWGFQQ 954
RF A + H+ SSDH L + +++ W + + V++ AW
Sbjct: 188 RFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGA 247
Query: 953 KGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIK 774
+ I K+K + L+SW KD N K+I L ++ L ++G ++ +K
Sbjct: 248 DASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVK 307
Query: 773 GELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQ 594
EL E +EE++WK +SR WL+EGD NT++FH R K+N I +L +G ++
Sbjct: 308 KELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTTMNK 367
Query: 593 ELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHP 414
+ +++ SF++ L++ ++L+ I + + LIKP + EI ALF + P
Sbjct: 368 KEMKEINRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDALFQIGP 427
Query: 413 HKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIA 234
KAPGPDG A W ++ ++ V+ FF + M + +N T++ +IPK +
Sbjct: 428 LKAPGPDGFPARFLQRNWGLLKGEVIAAVRNFFEDEVMQEGVNDTVIVMIPKKNLAEDMK 487
Query: 233 HFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHN 54
FRPISLCNV YK+++K L NR++ L ISE Q+AF+ GR I+DN ++A ECFH I N
Sbjct: 488 DFRPISLCNVVYKVVAKCLVNRMRPMLQEIISEAQSAFIPGRLITDNALIAFECFHSIKN 547
Query: 53 LRRGSRGFMALKLDMSK 3
+R ++ F ALKLD+SK
Sbjct: 548 CKRENQNFCALKLDLSK 564
Score = 50.8 bits (120), Expect(2) = 3e-76
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Frame = -1
Query: 1669 HHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGLSGGLLVFWDAEVCVVNVHEESF 1490
H P VFL+E + R + V+ +G GGL +FWD + VV S
Sbjct: 10 HRPKIVFLAETRQDQYMVQNRIGLR---RCFTVNGVGKGGGLALFWDESMNVVLKSYNSR 66
Query: 1489 CLEIEFVLNNVKSW-VIFVYGSVDSGIRNSQWDYFIQNKSKWGNLWIMGGDWNDIICPDE 1313
+++ + +W FVYG + R+ W + +S G+ W+M GD+N+ + E
Sbjct: 67 HIDVLITELDCCTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTE 126
Query: 1312 KR 1307
+
Sbjct: 127 HK 128
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 274 bits (701), Expect(2) = 4e-76
Identities = 143/425 (33%), Positives = 228/425 (53%), Gaps = 2/425 (0%)
Frame = -3
Query: 1271 FKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRFKDAKVLHIPRF 1092
F+ + +++ + + G P+T+ NN+A V+ LD+ ASP W F A ++H+
Sbjct: 407 FREVLVECDLQDIGFQGVPWTYDNNQASPNNVKVRLDRAVASPVWRAMFDQANIMHLTTA 466
Query: 1091 SSDHXXXXXXLYPHKLKSQQRF--CFDQRWTQLEGISHVVENAWGFQQKGTQFFQIQAKI 918
SDH + + ++ CF+ W +++ + + +W ++ K+
Sbjct: 467 CSDHVPLLLEKGGNMQQRRRSKINCFEAVWERVKSFNSIEHESWDDGGLAKNLGDVRTKL 526
Query: 917 KKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIKGELHEAYAKEEL 738
+ +L W +D N K I ++E + G + D R+K L E +EE+
Sbjct: 527 AYTMENLKRWSRDKIGNIKKSIERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEI 586
Query: 737 YWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQELIEKEVTSFYK 558
+WK +SR WL+EGDRNT++FH R ++N I +L +G++C +E + + SF++
Sbjct: 587 WWKQRSRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFR 646
Query: 557 DLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHPHKAPGPDGMTAX 378
DL++ ++L+ I D + L KP D EI ALF + P KAPGPDG A
Sbjct: 647 DLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPAR 706
Query: 377 XXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIAHFRPISLCNVTY 198
W V+ D+ + V++FF + + +N T++ +IPK P + FRP+SLCNV Y
Sbjct: 707 FFQRNWGVLKRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIY 766
Query: 197 KIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHNLRRGSRGFMALK 18
K+++K L NRL+ L ISE Q+AFV GR I+DN ++A ECFH IH R S+ F ALK
Sbjct: 767 KVVAKCLVNRLRPLLQEIISETQSAFVPGRMITDNALVAFECFHSIHKCTRESQDFCALK 826
Query: 17 LDMSK 3
LD+SK
Sbjct: 827 LDLSK 831
Score = 40.8 bits (94), Expect(2) = 4e-76
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Frame = -1
Query: 1675 RSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGLSGGLLVFWDAEVCVVNVHEE 1496
++H VFLSE K R + V+ +G GGL +FWD + V
Sbjct: 271 QTHSSKIVFLSETRQDQFYVSNLKWRLGLRRCFVVNGVGKGGGLALFWDESLKVELKSYN 330
Query: 1495 SFCLEIEFVLNNVKSWVI-FVYGSVDSGIRNSQWDYFIQNKSKWGNLWIMGGDWNDIICP 1319
+++ W FVYG + R+ W+ + + + W+M GD+N+ +
Sbjct: 331 MRHIDVIITEPEGARWTATFVYGEPKAQNRHEMWNLLRRIRLNASDPWLMIGDFNEAMWQ 390
Query: 1318 DEKR 1307
E R
Sbjct: 391 IEHR 394
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 267 bits (682), Expect(2) = 2e-75
Identities = 146/437 (33%), Positives = 232/437 (53%), Gaps = 1/437 (0%)
Frame = -3
Query: 1310 KRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFV 1131
K R+RS S F+ + ++ + + G P+T+ N + V+ LD+ ASP W
Sbjct: 103 KSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSS 162
Query: 1130 RFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFC-FDQRWTQLEGISHVVENAWGFQQ 954
RF A + H+ SSDH L + +++ W + + V++ AW
Sbjct: 163 RFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGA 222
Query: 953 KGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIK 774
+ I K+K + L+SW KD N K+I L ++ L ++G ++ +K
Sbjct: 223 DASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVK 282
Query: 773 GELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQ 594
EL E +EE++WK +SR WL+EGD NT++FH R K+N I +L +G ++
Sbjct: 283 KELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTTMNK 342
Query: 593 ELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHP 414
+ +++ SF++ L++ ++L+ I + + LIKP D EI ALF + P
Sbjct: 343 KEMKEISRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTDEEISDALFQIGP 402
Query: 413 HKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIA 234
KAPGPDG A W ++ ++ V+ FF + M + +N T++ +IPK +
Sbjct: 403 LKAPGPDGFPARFLQRNWGLLKGEVIAAVRNFFEDEVMQEGVNDTVIVMIPKKNLAEDMK 462
Query: 233 HFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHN 54
FRPISLCNV YK+++K L NR++ L ISE Q+AF+ GR I+DN ++A ECFH I N
Sbjct: 463 DFRPISLCNVVYKVVAKCLVNRMRPMLQEIISEAQSAFIPGRLITDNALIAFECFHSIKN 522
Query: 53 LRRGSRGFMALKLDMSK 3
+R ++ F ALKLD+SK
Sbjct: 523 CKRENQNFCALKLDLSK 539
Score = 46.2 bits (108), Expect(2) = 2e-75
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -1
Query: 1585 RWYCVDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSW-VIFVYGSVDSGIR 1409
R + V+ +G GGL +FWD + VV S +++ + +W F+YG + R
Sbjct: 10 RCFTVNGVGKGGGLALFWDESMNVVLKSYNSRHIDVLITELDCCTWRATFLYGEPRAQDR 69
Query: 1408 NSQWDYFIQNKSKWGNLWIMGGDWNDIICPDEKR 1307
+ W + +S G+ W+M GD+N+ + E +
Sbjct: 70 HLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHK 103
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 259 bits (662), Expect(2) = 2e-75
Identities = 144/429 (33%), Positives = 229/429 (53%), Gaps = 6/429 (1%)
Frame = -3
Query: 1271 FKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRFKDAKVLHIPRF 1092
F+N + L + G+ FTW+NNR G+ ++E LD+F A+ W ++F + V H+P+
Sbjct: 166 FRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKR 225
Query: 1091 SSDHXXXXXXLY-----PHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQKGTQFFQIQ 927
SDH + + K +RF F+ W + VV+ W +GT
Sbjct: 226 KSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVKETW---MRGTD---AG 279
Query: 926 AKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLT-SLGSNRNWDDWKRIKGELHEAYA 750
+ ++ LLSW K + K+I + Q++ L S S N + + + E
Sbjct: 280 INLARTANKLLSWSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEK 339
Query: 749 KEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQELIEKEVT 570
+EE+YW +SR W++ GD+NTKFFH R++RN++ ++ + G + ++ + +
Sbjct: 340 REEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFA 399
Query: 569 SFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHPHKAPGPDG 390
++++LF + + IL+ + I D L P E+ AL +HP+KAPGPDG
Sbjct: 400 HYFENLFQSGNNCEMDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDG 459
Query: 389 MTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIAHFRPISLC 210
M A FW + D+ V N + ++N T + LIPK K+ S FRPISLC
Sbjct: 460 MNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLC 519
Query: 209 NVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHNLRRGSRGF 30
NV YKI++K+LANR+K L + I E Q+ FV GR I+DN+++A+ECFH + + G +G+
Sbjct: 520 NVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGY 579
Query: 29 MALKLDMSK 3
+ LKLDMSK
Sbjct: 580 LGLKLDMSK 588
Score = 53.5 bits (127), Expect(2) = 2e-75
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 5/150 (3%)
Frame = -1
Query: 1735 SWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIG- 1559
SWNCRG+G PS + ++ + S +P VFLSE K + VD G
Sbjct: 6 SWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEGE 65
Query: 1558 ---LSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSW-VIFVYGSVDSGIRNSQWDY 1391
GGL + W +E+ V + S ++I W +YG + ++
Sbjct: 66 CRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEWRFTGIYGYPEEEHKDKTGAL 125
Query: 1390 FIQNKSKWGNLWIMGGDWNDIICPDEKRGG 1301
W+ GGD+N ++ EK+GG
Sbjct: 126 LSALARASRRPWLCGGDFNLMLVASEKKGG 155
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 232 bits (591), Expect(2) = 2e-75
Identities = 141/437 (32%), Positives = 216/437 (49%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
K+ G +R SS F + + + +M +L G+PFTW + E +++ LD+ F + WF
Sbjct: 148 KRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPFTWGG-KTNEMWIQSRLDRCFGNKNWF 206
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQ 954
F + + + SDH L K + + F FD+R + + AW Q
Sbjct: 207 RFFPISNQEFLDKRGSDHRPVLVRLTKTKEEYRGNFRFDKRLFNQPNVKETIVQAWNGSQ 266
Query: 953 KGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIK 774
+ + K+K R L W K+N NS +I +E S G R D +K
Sbjct: 267 RNENLLVLD-KLKHCRSALSRWKKENNINSSTRITQARAALELEQSSGFPRA-DLVFSLK 324
Query: 773 GELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQ 594
+L +A EE++W KSR +W+ GD+NT FFHA + + IDQL GL +
Sbjct: 325 NDLCKANHDEEVFWSQKSRAKWMHSGDKNTSFFHASVKDNRGKQHIDQLCDVNGLFHKDE 384
Query: 593 ELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHP 414
+++ DLF ++ P + D+ + + + LI NEI++A+F +
Sbjct: 385 MNKGAIAEAYFSDLFKSTDPSSFVDLFEDYQPRVTESMNNTLIAAVSKNEIREAVFAIRS 444
Query: 413 HKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIA 234
APG DG T +W ++ + K ++ FF KS N T + L+PK K P +
Sbjct: 445 SSAPGVDGFTGFFFQKYWSIICLQVTKEIQNFFLLGYFPKSWNFTHLCLLPKKKKPDKMT 504
Query: 233 HFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHN 54
RPISLC+V YKIISKI+ RL+ L +S Q+AFV R I DNI++AHE H +
Sbjct: 505 DLRPISLCSVLYKIISKIMVRRLQPFLPDLVSPNQSAFVAERLIFDNILIAHEVVHGLRT 564
Query: 53 LRRGSRGFMALKLDMSK 3
+ S+GF+A+K +MSK
Sbjct: 565 HKSVSKGFIAIKSNMSK 581
Score = 80.9 bits (198), Expect(2) = 2e-75
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Frame = -1
Query: 1741 MASWNCRGLGGPS--TIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVD 1568
+ SWNC+GLG TIP++ E+ SH P +FL E + + +R + V+
Sbjct: 3 LVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFTVN 62
Query: 1567 PIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQWDYF 1388
PIGLSGGL +FW V +V + + ++ + + + +V VYG+ ++ W+
Sbjct: 63 PIGLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHEFYVSCVYGNPAFSDKHLVWEKI 122
Query: 1387 IQNKSKWGNLWIMGGDWNDIICPDEKRGGGR 1295
+ W M GD+N I+ EKRGG R
Sbjct: 123 TRIGINRKEPWCMLGDFNPILHNGEKRGGPR 153
>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
Length = 1469
Score = 245 bits (626), Expect(2) = 4e-74
Identities = 154/441 (34%), Positives = 229/441 (51%), Gaps = 10/441 (2%)
Frame = -3
Query: 1295 RSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRFKDA 1116
R S F++ + +++ + ++G PFTW N R V LD+ A+ W F A
Sbjct: 521 RPASQMRAFRDALLDCQLQDIGFTGFPFTWCNKRKAPDTVRARLDRAVATTTWNNLFPRA 580
Query: 1115 KVLHIPRFSSDHXXXXXXLYPHKLKS----QQRFCFDQRWTQLEGISHVVENAWGFQQKG 948
V H+P SSDH L P S ++RF F+ WT + G + V+ +W +
Sbjct: 581 IVKHLPYGSSDHLPLLIFLDPAAPTSIRPNKRRFKFEAFWTTIPGCADVIHQSWAPNSQP 640
Query: 947 TQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIKGE 768
T F +I+K+RM LL W + ++ + T+++ L DD K +
Sbjct: 641 TNF---NYRIQKTRMSLLKWYQSKVGPIKSRLQKIATELDLLARQSIT---DDIKHCESA 694
Query: 767 LHEAYA----KEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCD 600
L E A +EE+YWK + + WLR GDRNT FFHA +++ +N I + + GL
Sbjct: 695 LKEEQASLWKQEEMYWKQRGKIHWLRCGDRNTAFFHASASEKRTQNRIAGIKNAHGLWIT 754
Query: 599 SQELIEKEVTSFYKDLFSTSSPEA-EFD-ILHGLPRSIDDFHSRHLIKPDDDNEIKQALF 426
+ + S+Y+DLF++S P+ E + L +PR+I D L +P + E+ A+
Sbjct: 755 RGPEVITTMLSYYQDLFTSSPPDPIEMERALSIIPRTITDDMRAILERPYNAAEVWPAVR 814
Query: 425 DLHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNP 246
+ P +PGPDG +W V + V + N M LNH+ + LIPK NP
Sbjct: 815 RMKPLSSPGPDGFPPVFYQKYWPTVGQATVEAVLKLLNNGVMEPQLNHSHIVLIPKKSNP 874
Query: 245 TSIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFH 66
AH+RPISL NV YKI SK++ANRLK + +S+ Q AF+ GR I+DNI+LA+E H
Sbjct: 875 QEPAHYRPISLSNVAYKIASKMVANRLKPIMERIVSKEQAAFLSGRSITDNILLAYELNH 934
Query: 65 HIHNLRRGSRGFMALKLDMSK 3
I RR S+ + ALKLD+SK
Sbjct: 935 SIKLARRQSKRYGALKLDVSK 955
Score = 63.2 bits (152), Expect(2) = 4e-74
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Frame = -1
Query: 1741 MASWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRW-YCVDP 1565
+ +WNCRGL ST+ +++++ S P+ +FLSE K +C + V
Sbjct: 371 LLAWNCRGLRSASTVRRLRDVISSDAPSMIFLSETKCLASHVEWLK--ECLSYFGVAVSA 428
Query: 1564 IGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVL----NNVKSW-VIFVYGSVDSGIRNSQ 1400
GLSGGL +FW +VCV + SFC VL + W YG+ +R
Sbjct: 429 TGLSGGLALFWRKDVCVSLL---SFCSSYIDVLVRLTPTLPEWRFTGFYGNPAVQLRPRS 485
Query: 1399 WDYFIQNKSKWGNLWIMGGDWNDIICPDE 1313
WD Q + W++ GD+N+++ +E
Sbjct: 486 WDLLRQIRHHSICPWLVAGDFNEVVMQNE 514
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 286 bits (731), Expect = 5e-74
Identities = 152/449 (33%), Positives = 231/449 (51%), Gaps = 12/449 (2%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
K G ++++ F+ ++ + + Y GHPFTWSN R G+ F+EE LD+F S +W
Sbjct: 109 KSGGNEKNIDMVVQFREAVQACNLVDVGYRGHPFTWSNRRYGQHFIEERLDRFLCSNDWS 168
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYP------HKLKSQQRFCFDQRWTQLEGISHVVEN 972
F D ++ + SDH + H KS R ++ W+ E ++V N
Sbjct: 169 ENFHDMAATNLVNWVSDHCPILMEVRERSKDRSHGKKSIHREHYEDMWSSYEACKNIVRN 228
Query: 971 AWGFQQKGTQFFQI---QAKIKKSRMDLLSWCKDN-KHNSHKQINILNTQIENLTSLGSN 804
W +G + + Q K S +L W K KQ ++N I
Sbjct: 229 EWASMGRGARENPVKHFQQAAKNSLANLKIWSKSEFADRKKKQDQLINQLIHAKHGSAQR 288
Query: 803 RNWDDWKRIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLV 624
N D +RI+ +++ EE+YW+ +SR +WL+EGDRNTK+FH+ R+++N I +
Sbjct: 289 MNGDQIRRIENQINGMLMDEEIYWRQRSRAEWLKEGDRNTKYFHSKASARRRKNKIWGIE 348
Query: 623 SREGLLCDSQELIEKEVTSFYKDLFSTSSPEAEF--DILHGLPRSIDDFHSRHLIKPDDD 450
+ G + Q +EKE ++++LF+TSSP D L G+ + + L +P +
Sbjct: 349 NSHGQWTEDQREVEKEFCEYFQNLFTTSSPNQSQIQDALDGISPKVTTNMNHQLEEPFTE 408
Query: 449 NEIKQALFDLHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVT 270
EI +AL + P KAPGPDG+ A W V + L +LNHT +
Sbjct: 409 EEIVEALHQMSPTKAPGPDGLPAAFFQKHWQTVRSSVIGTCMHILNEGGNLSALNHTFIA 468
Query: 269 LIPKVKNPTSIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNI 90
LIPK P + FRPISLCNV Y+I++K +ANRLK L IS Q+AF+ R ISDN+
Sbjct: 469 LIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAFIPNRLISDNV 528
Query: 89 VLAHECFHHIHNLRRGSRGFMALKLDMSK 3
++ +EC H I + + +G +ALKLD+SK
Sbjct: 529 IIGYECLHKIRHSQGKKKGLVALKLDISK 557
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 249 bits (637), Expect(2) = 1e-73
Identities = 160/444 (36%), Positives = 226/444 (50%), Gaps = 7/444 (1%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRA-GEGFVEENLDKFFASPEW 1137
K+RG ++ S F+ + + L ++G PFTW NN +G++ E LD+ A +W
Sbjct: 594 KERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDW 653
Query: 1136 FVRFKDAKVLHIPRFSSDHXXXXXXLYPHKL----KSQQRFCFDQRWTQLEGISHVVENA 969
RF +V SDH + +S+ F F+ W + E + +VENA
Sbjct: 654 CCRFPSFRVRKGDPRHSDHHPVIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENA 713
Query: 968 WGFQQKGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIE-NLTSLGSNRNWD 792
W G + ++ I++ +L W K+ + K+I +E + S S+
Sbjct: 714 WKLSV-GPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTAS 772
Query: 791 DWKRIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREG 612
+K L + + ELYW+ ++ WL +GDRNTKFFH C +R+KRN I +L +G
Sbjct: 773 REAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDG 832
Query: 611 LLCDSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQA 432
+ + ++ FYK LF+ P ++L +P+ + + L+K EIK+A
Sbjct: 833 EVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKA 892
Query: 431 LFDLHPHKAP-GPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKV 255
L + KAP G DGM A FW V DI VK F +M S N T+V LIPKV
Sbjct: 893 LDSIGDLKAPPGSDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKV 952
Query: 254 KNPTSIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHE 75
NP I RPISLCNV YKI SK+LANRLK L IS Q AFV R I+DNI+LA+E
Sbjct: 953 PNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNILLAYE 1012
Query: 74 CFHHIHNLRRGSRGFMALKLDMSK 3
H + RRGS GF A+K MSK
Sbjct: 1013 LTHFLKTKRRGSVGFAAVKQGMSK 1036
Score = 57.0 bits (136), Expect(2) = 1e-73
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Frame = -1
Query: 1750 PTMMASWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCG-DRWYC 1574
P + +WNCRGLG T+ + + + P+ +FLS +K G
Sbjct: 447 PMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSN-TKMDTNKLQCFRWKLGMPNLVV 505
Query: 1573 VDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIF--VYGSVDSGIRNSQ 1400
D G SGGL VFW E+ + ++++ V+ + W F VYG S ++
Sbjct: 506 KDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVD-VMEDDGFWWRFTGVYGEPRSDKKDLT 564
Query: 1399 WDYFIQNKSKWGNLWIMGGDWNDIICPDEKRGG 1301
W + G LW+ GD+N+++ EK G
Sbjct: 565 WKALRTLNATKGELWLCVGDFNEVLFSWEKERG 597
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 249 bits (637), Expect(2) = 1e-73
Identities = 160/444 (36%), Positives = 226/444 (50%), Gaps = 7/444 (1%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRA-GEGFVEENLDKFFASPEW 1137
K+RG ++ S F+ + + L ++G PFTW NN +G++ E LD+ A +W
Sbjct: 571 KERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDW 630
Query: 1136 FVRFKDAKVLHIPRFSSDHXXXXXXLYPHKL----KSQQRFCFDQRWTQLEGISHVVENA 969
RF +V SDH + +S+ F F+ W + E + +VENA
Sbjct: 631 CCRFPSFRVRKGDPRHSDHHPVIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENA 690
Query: 968 WGFQQKGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIE-NLTSLGSNRNWD 792
W G + ++ I++ +L W K+ + K+I +E + S S+
Sbjct: 691 WKLSV-GPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTAS 749
Query: 791 DWKRIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREG 612
+K L + + ELYW+ ++ WL +GDRNTKFFH C +R+KRN I +L +G
Sbjct: 750 REAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDG 809
Query: 611 LLCDSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQA 432
+ + ++ FYK LF+ P ++L +P+ + + L+K EIK+A
Sbjct: 810 EVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKA 869
Query: 431 LFDLHPHKAP-GPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKV 255
L + KAP G DGM A FW V DI VK F +M S N T+V LIPKV
Sbjct: 870 LDSIGDLKAPPGSDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKV 929
Query: 254 KNPTSIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHE 75
NP I RPISLCNV YKI SK+LANRLK L IS Q AFV R I+DNI+LA+E
Sbjct: 930 PNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNILLAYE 989
Query: 74 CFHHIHNLRRGSRGFMALKLDMSK 3
H + RRGS GF A+K MSK
Sbjct: 990 LTHFLKTKRRGSVGFAAVKQGMSK 1013
Score = 57.0 bits (136), Expect(2) = 1e-73
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Frame = -1
Query: 1750 PTMMASWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCG-DRWYC 1574
P + +WNCRGLG T+ + + + P+ +FLS +K G
Sbjct: 424 PMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSN-TKMDTNKLQCFRWKLGMPNLVV 482
Query: 1573 VDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIF--VYGSVDSGIRNSQ 1400
D G SGGL VFW E+ + ++++ V+ + W F VYG S ++
Sbjct: 483 KDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVD-VMEDDGFWWRFTGVYGEPRSDKKDLT 541
Query: 1399 WDYFIQNKSKWGNLWIMGGDWNDIICPDEKRGG 1301
W + G LW+ GD+N+++ EK G
Sbjct: 542 WKALRTLNATKGELWLCVGDFNEVLFSWEKERG 574
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 225 bits (573), Expect(2) = 3e-73
Identities = 144/440 (32%), Positives = 218/440 (49%), Gaps = 3/440 (0%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
K G +RS SS F++ + M +L +G+ FTW NR + +V+ LD+ F +P WF
Sbjct: 145 KLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNR-NDQWVQCKLDRCFGNPAWF 203
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGF-- 960
F +A + +F SDH + +F +D+R V+ +W
Sbjct: 204 SIFPNAHQWFLEKFGSDHRPVLVKFTNDNELFRGQFRYDKRLDDDPYCIEVIHRSWNSAM 263
Query: 959 -QQKGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWK 783
Q + FF + + R + W + N+ +I L ++ S+ W +
Sbjct: 264 SQGTHSSFFSLI----ECRRAISVWKHSSDTNAQSRIKRLRKDLDAEKSI-QIPCWPRIE 318
Query: 782 RIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLC 603
IK +L AY EEL+W+ KSR +WL GD+NT FFHA + +N + L+
Sbjct: 319 YIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELSFLLDENDQEF 378
Query: 602 DSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFD 423
K +SF+++LF+++ + L GL + + +LI+ + E+ A+F
Sbjct: 379 TRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVFS 438
Query: 422 LHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPT 243
++ APGPDG TA W +V I + FF + + NHT + LIPK+ +P
Sbjct: 439 INKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQ 498
Query: 242 SIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHH 63
++ RPISLC+V YKIISKIL RLK L +S Q+AFV R ISDNI++AHE H
Sbjct: 499 RMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHS 558
Query: 62 IHNLRRGSRGFMALKLDMSK 3
+ R S+ MA K DMSK
Sbjct: 559 LRTNDRISKEHMAFKTDMSK 578
Score = 80.5 bits (197), Expect(2) = 3e-73
Identities = 45/147 (30%), Positives = 73/147 (49%)
Frame = -1
Query: 1735 SWNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGL 1556
SWNC+GL P TI +KE+ + H P+ +FL E + D + V+P G
Sbjct: 4 SWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEGR 63
Query: 1555 SGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQWDYFIQNK 1376
SGGL +FW + + + ++ + ++++ N ++ VYG + +R W++
Sbjct: 64 SGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEHLNSIG 123
Query: 1375 SKWGNLWIMGGDWNDIICPDEKRGGGR 1295
K W + GD+NDI DEK GG R
Sbjct: 124 LKRAEAWCLIGDFNDIRSNDEKLGGPR 150
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 242 bits (618), Expect(2) = 5e-73
Identities = 146/442 (33%), Positives = 225/442 (50%), Gaps = 5/442 (1%)
Frame = -3
Query: 1313 KKRGRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWF 1134
K+ G R F+ + + ++ L Y+G TW + + E LD+F SP W
Sbjct: 146 KEGGADRVRRGMYQFRETMDDLFLRDLGYNGVWHTWERGNSLSTCIRERLDRFVCSPSWA 205
Query: 1133 VRFKDAKVLHIPRFSSDHXXXXXXLYPHK--LKSQQRFCFDQRWTQLEGISHVVENAWGF 960
+ + V H R+ SDH + Q+RF F+ W + +AW
Sbjct: 206 TMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTSKQRRFFFETSWLLDPTCEETIRDAWTD 265
Query: 959 QQKGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLG-SNRNWDDWK 783
+ + ++ + L SW + N KQ+ + + + L S+ N +
Sbjct: 266 SAGDS----LTGRLDLLALKLKSWSSEKGGNIGKQLGRVESDLCRLQQQPISSANCEARL 321
Query: 782 RIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLC 603
++ +L E +AK+E W +SR +R+GDRNTK+FH QR+KRN + L G C
Sbjct: 322 TLEKKLDELHAKQEARWYLRSRAMEVRDGDRNTKYFHHKASQRKKRNFVKGLFDASGTWC 381
Query: 602 DSQELIEKEVTSFYKDLFSTSSPEAEF--DILHGLPRSIDDFHSRHLIKPDDDNEIKQAL 429
+ + IE T ++ +F++++P D+L + + + + L+KP E+ AL
Sbjct: 382 EEVDDIECVFTDYFTSIFTSTNPSDVQLNDVLCCVDPVVTEECNTWLLKPFSKEELYVAL 441
Query: 428 FDLHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKN 249
+HP KAPGPDGM A FW+++ D+ + V S +NHT + LIPKVKN
Sbjct: 442 SQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKVKN 501
Query: 248 PTSIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECF 69
PT+ A FRPI+LCNV YK++SK L RLK L +SE Q+AFV GR I+DN ++A E F
Sbjct: 502 PTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVF 561
Query: 68 HHIHNLRRGSRGFMALKLDMSK 3
H + + R +G +A+KLDMSK
Sbjct: 562 HSMKHRNRSRKGTIAMKLDMSK 583
Score = 62.4 bits (150), Expect(2) = 5e-73
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = -1
Query: 1732 WNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGLS 1553
WNCRG+G P T+ Q+++ + P+ +FLSE K + V G +
Sbjct: 6 WNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVSSRGRA 65
Query: 1552 GGLLVFWDAEV--CVVNVHEESFCLEIEFVLNNVKSW-VIFVYGSVDSGIRNSQWDYFIQ 1382
GGL VFW E+ +V+ + C +I+ + K W + +YG ++ W
Sbjct: 66 GGLCVFWREELSFSLVSFSQHHICGDID---DGAKKWRFVGIYGWAKEEEKHHTWSLMRF 122
Query: 1381 NKSKWGNLWIMGGDWNDIICPDEKRGG 1301
+MGGD+N+I+ +EK GG
Sbjct: 123 LCEDLSRPILMGGDFNEIMSYEEKEGG 149
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 242 bits (618), Expect(2) = 3e-72
Identities = 144/434 (33%), Positives = 221/434 (50%)
Frame = -3
Query: 1304 GRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRF 1125
G QR + GF+N + T ++K + G F+W R V+ LD+ F + E F
Sbjct: 510 GPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVGERHSHT-VKCCLDRAFINSEGAFLF 568
Query: 1124 KDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQKGT 945
A++ + SDH L + + + F FD+R ++ V+ W G
Sbjct: 569 PFAELEFLEFTGSDHKPLFLSLEKTETRKMRPFRFDKRLLEVPHFKTYVKAGWNKAING- 627
Query: 944 QFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIKGEL 765
Q + +++ R + + NS +IN L ++ S + I+ EL
Sbjct: 628 QRKHLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQREL 687
Query: 764 HEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQELI 585
AY EE YW+ KSRNQW++EGDRNT+FFHACT R N + + EG++ + I
Sbjct: 688 TVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEI 747
Query: 584 EKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHPHKA 405
F+ ++ ++ G + + + L K D EI A+ + KA
Sbjct: 748 GVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKA 807
Query: 404 PGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIAHFR 225
PGPDG+TA W +V D+ K VK FF S M +S+NHT + +IPK+ NP +++ +R
Sbjct: 808 PGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYR 867
Query: 224 PISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHNLRR 45
PI+LCNV YKIISK L RLK L +S+ Q AF+ GR ++DN+++AHE H + +R
Sbjct: 868 PIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRKR 927
Query: 44 GSRGFMALKLDMSK 3
S+ +MA+K D+SK
Sbjct: 928 VSQSYMAVKTDVSK 941
Score = 60.1 bits (144), Expect(2) = 3e-72
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Frame = -1
Query: 1723 RGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGLSGGL 1544
+G+G P T Q+ + + + +FL E P G SGGL
Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGL 429
Query: 1543 LVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQWDYFIQNKSKWG 1364
+ W V + N++++ +++ +NN+ ++ VYG R+S W +F +N SK
Sbjct: 430 ALLWKDSVRLSNLYQDDRHIDVHISINNINFYLSRVYGHPCQSERHSLWTHF-ENLSKTR 488
Query: 1363 N-LWIMGGDWNDIICPDEKRGG 1301
N WI+ GD+N+I+ +EK GG
Sbjct: 489 NDPWILIGDFNEILSNNEKIGG 510
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 248 bits (634), Expect(2) = 4e-72
Identities = 140/435 (32%), Positives = 217/435 (49%), Gaps = 2/435 (0%)
Frame = -3
Query: 1301 RQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRFK 1122
++RS F++ ++T E+ L + G P+T+ N R G V LD+ A W F+
Sbjct: 152 KKRSEVQMQAFRDVLQTYELHDLGFKGLPYTYDNKREGINNVRVRLDRVVADDGWRDMFR 211
Query: 1121 DAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFC--FDQRWTQLEGISHVVENAWGFQQKG 948
++V H+ S+H + +R C ++ W + + V++ +W
Sbjct: 212 SSQVEHLISPCSNHCPVVLKFCVDTNQPARRKCLHYEIFWEREAELVEVIDESWAALGDK 271
Query: 947 TQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIKGE 768
+ I + + L SW + N ++I ++ L G++ +
Sbjct: 272 SDLADISRALSQVMAKLHSWSRRKCKNVGREIEKGRKRLAELIESGADSR--SIRSASDN 329
Query: 767 LHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQEL 588
LHE +EE+ W +SR WL+EGDRNT+FFH+ + R K+N I +L REG + +
Sbjct: 330 LHELLYREEMLWLQRSRVNWLKEGDRNTRFFHSKAVWRAKKNRITKLKDREGTVHSTTAK 389
Query: 587 IEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHPHK 408
+E T ++K++FS + + + R + + L + EI A+F + P K
Sbjct: 390 LEDMATEYFKEVFSADPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPLK 449
Query: 407 APGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIAHF 228
APGPDG A W + DI + VK FF M + +N T + LIPK++ P + F
Sbjct: 450 APGPDGFPARFYQRHWGFMKNDIVRAVKLFFDTGVMPEGVNDTAIVLIPKIEQPMELRDF 509
Query: 227 RPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHNLR 48
RPISLCNV YK++SK L NRL+ L +S CQ+AFV GR I+DN +LA ECFH I R
Sbjct: 510 RPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSAFVLGRMITDNAILAFECFHSIQKNR 569
Query: 47 RGSRGFMALKLDMSK 3
+ A KLD+SK
Sbjct: 570 KPESAACAYKLDLSK 584
Score = 53.1 bits (126), Expect(2) = 4e-72
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Frame = -1
Query: 1732 WNCRGLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPI-GL 1556
WNCRG+G +T+ + + R VFL E + G R + + G+
Sbjct: 6 WNCRGIGNAATVRDLCALSREAGSQLVFLCE-TRQSVERMRRLRSRLGLRGFVGENCNGM 64
Query: 1555 SGGLLVFWDAEVCV--VNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQWDYFIQ 1382
SGGL +FWD V V ++E + +N+ V FVYG R+ W
Sbjct: 65 SGGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGEPRVEHRHRMWSMLNS 124
Query: 1381 NKSKWGNLWIMGGDWNDII 1325
K W++ GD+N+ +
Sbjct: 125 IKQSSNLPWLVLGDFNETL 143
Score = 213 bits (541), Expect = 6e-52
Identities = 115/336 (34%), Positives = 172/336 (51%)
Frame = -3
Query: 1010 WTQLEGISHVVENAWGFQQKGTQFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQI 831
W + + V++ +W + I + + L SW + N ++I ++
Sbjct: 949 WEREAELVEVIDESWAASGDKSDLADISRALSQVMAKLHSWSRRKCKNVGREIEKGRKRL 1008
Query: 830 ENLTSLGSNRNWDDWKRIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQ 651
L G++ + LHE +EE+ W +SR WL+EGDRNT+FFH+ + R
Sbjct: 1009 AELIESGADST--SIRSASDNLHELLYREEMLWLQRSRVNWLKEGDRNTRFFHSKAVWRA 1066
Query: 650 KRNSIDQLVSREGLLCDSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRH 471
K+N I +L REG + + +E T ++K++FS + + + R + +
Sbjct: 1067 KKNRITKLKDREGTVHSTTAKLEDMATEYFKEVFSADPLLDQSKVTRLIQRKVSPAMNET 1126
Query: 470 LIKPDDDNEIKQALFDLHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKS 291
L + EI A+F + P KA GPDG A W + DI + VK FF M +
Sbjct: 1127 LCSEFKEEEISNAMFQIGPLKALGPDGFPARFYQRHWGFMKNDIVRAVKLFFDTGVMPEG 1186
Query: 290 LNHTMVTLIPKVKNPTSIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKG 111
+N T + LIPK++ P + FRPISLCNV YK++SK L NRL+ L +S CQ+AFV G
Sbjct: 1187 VNDTAIVLIPKIEQPMELRDFRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSAFVLG 1246
Query: 110 RHISDNIVLAHECFHHIHNLRRGSRGFMALKLDMSK 3
R I+DN +LA ECFH I R+ A KLD+SK
Sbjct: 1247 RMITDNAILAFECFHSIQKNRKPESAACAYKLDLSK 1282
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 242 bits (618), Expect(2) = 4e-72
Identities = 144/434 (33%), Positives = 221/434 (50%)
Frame = -3
Query: 1304 GRQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRF 1125
G QR + GF+N + T ++K + G F+W R V+ LD+ F + E F
Sbjct: 530 GPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVGERHSHT-VKCCLDRAFINSEGAFLF 588
Query: 1124 KDAKVLHIPRFSSDHXXXXXXLYPHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQQKGT 945
A++ + SDH L + + + F FD+R ++ V+ W G
Sbjct: 589 PFAELEFLEFTGSDHKPLFLSLEKTETRKMRPFRFDKRLLEVPHFKTYVKAGWNKAING- 647
Query: 944 QFFQIQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNWDDWKRIKGEL 765
Q + +++ R + + NS +IN L ++ S + I+ EL
Sbjct: 648 QRKHLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQREL 707
Query: 764 HEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLCDSQELI 585
AY EE YW+ KSRNQW++EGDRNT+FFHACT R N + + EG++ + I
Sbjct: 708 TVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEI 767
Query: 584 EKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFDLHPHKA 405
F+ ++ ++ G + + + L K D EI A+ + KA
Sbjct: 768 GVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKA 827
Query: 404 PGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPTSIAHFR 225
PGPDG+TA W +V D+ K VK FF S M +S+NHT + +IPK+ NP +++ +R
Sbjct: 828 PGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYR 887
Query: 224 PISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHHIHNLRR 45
PI+LCNV YKIISK L RLK L +S+ Q AF+ GR ++DN+++AHE H + +R
Sbjct: 888 PIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRKR 947
Query: 44 GSRGFMALKLDMSK 3
S+ +MA+K D+SK
Sbjct: 948 VSQSYMAVKTDVSK 961
Score = 59.3 bits (142), Expect(2) = 4e-72
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Frame = -1
Query: 1720 GLGGPSTIPQIKEIWRSHHPNFVFLSEXXXXXXXXXXXKHFKCGDRWYCVDPIGLSGGLL 1541
G+G P T Q+ + + + +FL E P G SGGL
Sbjct: 391 GIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGLA 450
Query: 1540 VFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVIFVYGSVDSGIRNSQWDYFIQNKSKWGN 1361
+ W V + N++++ +++ +NN+ ++ VYG R+S W +F +N SK N
Sbjct: 451 LLWKDSVRLSNLYQDDRHIDVHISINNINFYLSRVYGHPCQSERHSLWTHF-ENLSKTRN 509
Query: 1360 -LWIMGGDWNDIICPDEKRGG 1301
WI+ GD+N+I+ +EK GG
Sbjct: 510 DPWILIGDFNEILSNNEKIGG 530
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 250 bits (638), Expect(2) = 4e-72
Identities = 155/440 (35%), Positives = 236/440 (53%), Gaps = 7/440 (1%)
Frame = -3
Query: 1301 RQRSLSSCAGFKNFIRTMEMKKLAYSGHPFTWSNNRAGEGFVEENLDKFFASPEWFVRFK 1122
R+RS F++ + + L + G FTWSN + + LD+ A+ E+ F+
Sbjct: 113 RERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFE 172
Query: 1121 DAKVLHIPRFSSDHXXXXXXLY-----PHKLKSQQRFCFDQRWTQLEGISHVVENAWGFQ 957
D V ++ SSDH L ++ QQ F F+ W + E VVEN+W
Sbjct: 173 DCLVENVITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRIS 232
Query: 956 QKGTQFFQ-IQAKIKKSRMDLLSWCKDNKHNSHKQINILNTQIENLTSLGSNRNW-DDWK 783
G + + + +++ + L W K + + ++I + ++++L N + K
Sbjct: 233 SAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEK 292
Query: 782 RIKGELHEAYAKEELYWKNKSRNQWLREGDRNTKFFHACTIQRQKRNSIDQLVSREGLLC 603
I+ +L E + KEE+ + +SR WLREGDRNT FFHA R++ N I +LV +G C
Sbjct: 293 LIEQQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRC 352
Query: 602 DSQELIEKEVTSFYKDLFSTSSPEAEFDILHGLPRSIDDFHSRHLIKPDDDNEIKQALFD 423
SQE I++ FY++LFS+ ++ ++L +P + DF + L K + EIK ALF
Sbjct: 353 ISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQ 412
Query: 422 LHPHKAPGPDGMTAXXXXXFWYVVAFDICKVVKQFFANSKMLKSLNHTMVTLIPKVKNPT 243
+ KAPGPDG A W ++ IC V+ F ++ + L ++V LIPKV N +
Sbjct: 413 MGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIPKVNNAS 472
Query: 242 SIAHFRPISLCNVTYKIISKILANRLKSCLHLCISECQTAFVKGRHISDNIVLAHECFHH 63
++ FRPISLCNV YKI SK+LANRLK L +SE Q+AFV GR I+D+ ++A+EC H
Sbjct: 473 HLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHT 532
Query: 62 IHNLRRGSRGFMALKLDMSK 3
I + F ALK+DM K
Sbjct: 533 IRK-QHNKNPFFALKIDMMK 551
Score = 51.6 bits (122), Expect(2) = 4e-72
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 1579 YCVDPIGLSGGLLVFWDAEVCVVNVHEESFCLEIEFVLNNVKSWVI-FVYGSVDSGIRNS 1403
+ V GLSGGL +FW V S +++ + W I FVYG +R+
Sbjct: 19 FAVSCEGLSGGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPPWRISFVYGEPKRELRHF 78
Query: 1402 QWDYFIQNKSKWGNLWIMGGDWNDIICPDEKRG 1304
W+ + +W W+ GD+N+++C DE G
Sbjct: 79 FWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLG 111