BLASTX nr result

ID: Rehmannia22_contig00013089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00013089
         (343 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353608.1| PREDICTED: transcription factor TCP8-like [S...    85   9e-15
ref|NP_001233966.1| TCP transcription factor 13 [Solanum lycoper...    84   1e-14
ref|NP_001233806.1| TCP transcription factor 12 [Solanum lycoper...    75   1e-11
ref|XP_006350337.1| PREDICTED: transcription factor TCP8-like [S...    72   6e-11
ref|XP_002325981.2| hypothetical protein POPTR_0019s11120g, part...    55   7e-06

>ref|XP_006353608.1| PREDICTED: transcription factor TCP8-like [Solanum tuberosum]
          Length = 327

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 59/113 (52%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
 Frame = -1

Query: 337 ATATVGQQEWQYK--ASSMQRIGGFEFPGTGRFNPVQLGSMXXXXXXXXXXXXXXXXVTE 164
           A   VG   W     +S+MQRIGGFE PG GRF+PVQLGSM                VTE
Sbjct: 219 AAGNVGNTFWMLPGTSSTMQRIGGFELPGGGRFSPVQLGSM--FLQQPQPVQQLGLGVTE 276

Query: 163 TNMGMLXXXXXXXXXXXSR-IDLGMNLEXXXXXHDQNQPQHSDSGDENPKDSQ 8
           TNMGML              IDLGMNLE     H QNQPQ SDSGDEN KDSQ
Sbjct: 277 TNMGMLASMNAYNSSSRGSGIDLGMNLE--QHHHHQNQPQGSDSGDENHKDSQ 327


>ref|NP_001233966.1| TCP transcription factor 13 [Solanum lycopersicum]
           gi|306416837|gb|ADM87262.1| TCP transcription factor 13
           [Solanum lycopersicum]
          Length = 325

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 60/114 (52%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
 Frame = -1

Query: 337 ATATVGQQEWQYK--ASSMQRIGGFEFPGTGRFNPVQLGSMXXXXXXXXXXXXXXXXVTE 164
           A   VG   W     +S+MQRIGGFE PG GRF+PVQLGSM                VTE
Sbjct: 215 AAGNVGNTFWMLPGTSSTMQRIGGFELPGGGRFSPVQLGSM--FLQQPQPVQQLGLGVTE 272

Query: 163 TNMGML--XXXXXXXXXXXSRIDLGMNLEXXXXXHDQNQPQHSDSGDENPKDSQ 8
           TNMGML             S IDLGMNLE     H QNQPQ SDSGDEN KDSQ
Sbjct: 273 TNMGMLASMNAYNSSSSRGSGIDLGMNLE--QHHHHQNQPQGSDSGDENHKDSQ 324


>ref|NP_001233806.1| TCP transcription factor 12 [Solanum lycopersicum]
           gi|306416835|gb|ADM87261.1| TCP transcription factor 12
           [Solanum lycopersicum]
          Length = 374

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 54/115 (46%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
 Frame = -1

Query: 343 SAATATVGQQE---WQYKASSMQRIGGFEFPGTGRFNPVQLGSMXXXXXXXXXXXXXXXX 173
           +A +   GQ +   WQYK+S   RIGG EFPG GRF+PVQLGSM                
Sbjct: 275 TAVSVGAGQSDHQLWQYKSS---RIGGLEFPGGGRFSPVQLGSMVLQQSHPVQQLG---- 327

Query: 172 VTETNMGMLXXXXXXXXXXXSRIDLGMNLEXXXXXHDQNQPQHSDSGDENPKDSQ 8
              +NMGML           SR+DLGMNLE     H+Q Q Q SDSGDEN  DSQ
Sbjct: 328 ---SNMGML--NAYNNNNNNSRVDLGMNLE----HHNQTQHQDSDSGDENHNDSQ 373


>ref|XP_006350337.1| PREDICTED: transcription factor TCP8-like [Solanum tuberosum]
          Length = 389

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 52/112 (46%), Positives = 58/112 (51%)
 Frame = -1

Query: 343 SAATATVGQQEWQYKASSMQRIGGFEFPGTGRFNPVQLGSMXXXXXXXXXXXXXXXXVTE 164
           S   A    Q WQYK+S+   IGG EFPG GRF+PVQLGSM                   
Sbjct: 290 SVGAAQSDHQLWQYKSST---IGGLEFPGGGRFSPVQLGSMVLQQSQPVQQLG------- 339

Query: 163 TNMGMLXXXXXXXXXXXSRIDLGMNLEXXXXXHDQNQPQHSDSGDENPKDSQ 8
           +NMGML           SR+DLGMNLE     H + Q Q SDSGDEN  DSQ
Sbjct: 340 SNMGML-SSMNAYNNNNSRVDLGMNLE--HHHHQRQQHQDSDSGDENHNDSQ 388


>ref|XP_002325981.2| hypothetical protein POPTR_0019s11120g, partial [Populus
           trichocarpa] gi|550317265|gb|EEF00363.2| hypothetical
           protein POPTR_0019s11120g, partial [Populus trichocarpa]
          Length = 335

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 45/118 (38%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = -1

Query: 337 ATATVGQQEWQYKAS-------SMQRIGGFEFPGTGRF-NPVQLGSMXXXXXXXXXXXXX 182
           A A    Q W +  +       SMQR+    F G+GR  NPVQLGSM             
Sbjct: 227 AAAVTEPQMWTFPTAGAAAGVTSMQRVN---FGGSGRVSNPVQLGSMIVQQQVGANQQLG 283

Query: 181 XXXVTETNMGMLXXXXXXXXXXXSRIDLGMNLEXXXXXHDQNQPQHSDSGDENPKDSQ 8
               +E+NMGM+            R+ LGM+LE       + QPQ SDSGDENP DSQ
Sbjct: 284 LGL-SESNMGMIFGGVNAYSSS--RVGLGMDLEQNN---QEKQPQGSDSGDENPNDSQ 335


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