BLASTX nr result
ID: Rehmannia22_contig00012971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00012971
(1235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 534 e-149
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 534 e-149
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 533 e-149
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 532 e-148
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su... 531 e-148
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 525 e-146
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 523 e-146
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 517 e-144
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype... 514 e-143
gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 510 e-142
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 507 e-141
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su... 505 e-140
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 504 e-140
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ... 504 e-140
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ... 503 e-140
gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus... 499 e-139
gb|AFK41039.1| unknown [Medicago truncatula] 499 e-139
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi... 494 e-137
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A... 492 e-136
gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea] 492 e-136
>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
Length = 318
Score = 534 bits (1375), Expect = e-149
Identities = 271/319 (84%), Positives = 291/319 (91%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEGVSYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDLYSSDHTVVPVDF DS+ G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSA-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEPEI+IN FVESSPT+VFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
vinifera]
Length = 318
Score = 534 bits (1375), Expect = e-149
Identities = 273/319 (85%), Positives = 292/319 (91%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEGVSYQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1 MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDL SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEPEI+IN +VESSPTKVFDI+A++QQV + DAEAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
Length = 318
Score = 533 bits (1372), Expect = e-149
Identities = 272/319 (85%), Positives = 292/319 (91%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEGVSYQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1 MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDL SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEPEI+IN +VESSPTKVFDI+A++QQV + DAEAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Solanum tuberosum]
Length = 319
Score = 532 bits (1371), Expect = e-148
Identities = 269/319 (84%), Positives = 287/319 (89%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEGVSYQRFPKIKIR V+DDFMKFELRETDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV
Sbjct: 61 VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDL SSDHTVVPVD+ D+S+ DN N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEPEIYIN E VESSPTKVF I+ +QV + D EAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS
Sbjct: 241 DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319
>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Solanum lycopersicum]
Length = 319
Score = 531 bits (1367), Expect = e-148
Identities = 267/319 (83%), Positives = 287/319 (89%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEGVSYQRFPKIK+R V+DDFMKFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV
Sbjct: 61 VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDL SSDHTVVPVD+ D+S+ DN N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEPEIYIN E VESSPTKVF I+ +QV + D EAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS
Sbjct: 241 DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319
>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 318
Score = 525 bits (1353), Expect = e-146
Identities = 265/319 (83%), Positives = 288/319 (90%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SYQRFP+IKIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1 MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQC+YCSVEFHLRAKCI DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDLYSSDHTVVPVDF DSS G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSS-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I+IN +VESSPTKVFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
D+EV+KKAE+MGKPGLV I AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS
Sbjct: 240 DEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 3-like [Citrus
sinensis] gi|557524889|gb|ESR36195.1| hypothetical
protein CICLE_v10028849mg [Citrus clementina]
Length = 319
Score = 523 bits (1348), Expect = e-146
Identities = 268/320 (83%), Positives = 289/320 (90%), Gaps = 1/320 (0%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
M+G SYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNAD-NRGIIIVKLRRGQELGLRAIARKGIGKDHAK 670
TSKDLYSSDH+VVPVDF D + G D+ D RGIIIVKLRRGQEL LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHSVVPVDFVDPA-GYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAK 179
Query: 669 WSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYT 490
WSPAATVTFMYEPEI+IN +VESSPTKVFDI+ NT QVY+ DAEAYT
Sbjct: 180 WSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYT 239
Query: 489 YDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLS 310
YDDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS
Sbjct: 240 YDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLS 299
Query: 309 ADTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 EDTVEADDQFGELGAHMRGG 319
>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer
arietinum]
Length = 319
Score = 517 bits (1331), Expect = e-144
Identities = 259/319 (81%), Positives = 285/319 (89%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SY R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDLYSSDHTVVPVDF + L+++D RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I+IN E+V+SSPT+VFDI+ TQQV + D EAY+Y
Sbjct: 181 SPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYSY 240
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEV+KKAEAMGKPGLVEI AK+DSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS
Sbjct: 241 DDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSE 300
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319
>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
[Populus trichocarpa] gi|550331423|gb|EEE87820.2|
DNA-directed RNA polymerase II 36 kDa polypeptide B
family protein [Populus trichocarpa]
Length = 323
Score = 514 bits (1325), Expect = e-143
Identities = 263/323 (81%), Positives = 282/323 (87%), Gaps = 4/323 (1%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
ME VSYQRFPKIKIR ++DD++KFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADN----RGIIIVKLRRGQELGLRAIARKGIGKD 679
TSKDLYSSDH V+PVDF D S D D+ RGIIIVKLRRGQEL LRAIARKGIGKD
Sbjct: 121 TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180
Query: 678 HAKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAE 499
HAKWSPAATVTFMYEPEI+IN ++ESSPTKVFDI+ TQQV + D E
Sbjct: 181 HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE 240
Query: 498 AYTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAV 319
AYTYDDEV+KKAEAMGK GL++I AKEDSFIFTVE+TGA+KASQL LNAIE+LKQKLDAV
Sbjct: 241 AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAV 300
Query: 318 RLSADTVEADEQFGELGAHMRGG 250
RLS DTVEAD+QFGELG HMRGG
Sbjct: 301 RLSDDTVEADDQFGELGVHMRGG 323
>gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
Length = 318
Score = 510 bits (1314), Expect = e-142
Identities = 255/319 (79%), Positives = 286/319 (89%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SYQR P++KIR +RDD+MKFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1 MEGKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSKDL SSDHTVVPVDF DS+ G+++++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLLSSDHTVVPVDFSDSA-GMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I IN +VESSPTKVFD + T++V + D EAYTY
Sbjct: 180 SPAATVTFMYEPDIRINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVMVVDPEAYTY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEV+KKAEAMGKPGLV+I AKEDSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS
Sbjct: 240 DDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Fragaria vesca subsp. vesca]
Length = 318
Score = 507 bits (1305), Expect = e-141
Identities = 255/319 (79%), Positives = 285/319 (89%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SYQRFP++KIR +R D++KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1 MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCEYCSVEFHLRA+C +DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TSK+L SSDHTVVPVDF D+S G + ++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKELLSSDHTVVPVDFSDAS-GYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I IN +V+SSPTKVF+I+ NT +V + D EAYTY
Sbjct: 180 SPAATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYTY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEV+KKAEAMGKPGLV+I AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS
Sbjct: 240 DDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Cucumis sativus]
Length = 320
Score = 505 bits (1301), Expect = e-140
Identities = 257/320 (80%), Positives = 281/320 (87%), Gaps = 1/320 (0%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SYQRFPK+KIR +RDD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNA-DNRGIIIVKLRRGQELGLRAIARKGIGKDHAK 670
TSKDLYSSDHTVVPVDF DS+ A D +GIIIVKLRRGQEL LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK 180
Query: 669 WSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYT 490
WSPAATVTFMYEP I+IN +VES PT+VF+++ T QV + D EAYT
Sbjct: 181 WSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYT 240
Query: 489 YDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLS 310
YDDEV+KKAEAMGK GLV+I A+EDSFIFTVE+TGAIKASQL LNAI++LKQKLDAVRLS
Sbjct: 241 YDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS 300
Query: 309 ADTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 301 DDTVEADDQFGELGAHMRGG 320
>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
[Medicago truncatula] gi|355508950|gb|AES90092.1|
DNA-directed RNA polymerase II subunit RPB3-A [Medicago
truncatula]
Length = 318
Score = 504 bits (1297), Expect = e-140
Identities = 252/319 (78%), Positives = 281/319 (88%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SY R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR KCI DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
+SKDL SSDHTV PVD P +++ D RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 SSKDLISSDHTVTPVDVPGGDASIES-DGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I+IN E+V+SSPT+VFDI+ TQQV + D EAY+Y
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEV+KKAEAMGKPGL+EI AK+DSFIFTVE+TGA+KASQL LN+IE+LKQKLDAVRLS
Sbjct: 240 DDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Glycine max]
Length = 319
Score = 504 bits (1297), Expect = e-140
Identities = 257/317 (81%), Positives = 282/317 (88%)
Frame = -3
Query: 1200 GVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVL 1021
GVSY R P++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPT+AIDLVEIEVNSSVL
Sbjct: 4 GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63
Query: 1020 NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTS 841
NDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDVTS
Sbjct: 64 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123
Query: 840 KDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSP 661
KDLYSSD TV PVDF D S D+ +NRGIIIVKLRRGQEL LRAIARKGIGKDHAKWSP
Sbjct: 124 KDLYSSDPTVSPVDFSDPSA-TDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 182
Query: 660 AATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDD 481
AATVTFMYEPEI+IN E+V+SSPT+VF+I+ TQQV + DAEAYTYDD
Sbjct: 183 AATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDD 242
Query: 480 EVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADT 301
EVLKKAEAMGKPGLVEI A++DSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS DT
Sbjct: 243 EVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDT 302
Query: 300 VEADEQFGELGAHMRGG 250
VEAD+QFGELGAHMRGG
Sbjct: 303 VEADDQFGELGAHMRGG 319
>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Glycine max]
Length = 320
Score = 503 bits (1295), Expect = e-140
Identities = 256/317 (80%), Positives = 280/317 (88%)
Frame = -3
Query: 1200 GVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSSVL 1021
GVSY R P++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPT+AIDLVEIEVNSSVL
Sbjct: 4 GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63
Query: 1020 NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDVTS 841
NDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDVTS
Sbjct: 64 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123
Query: 840 KDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKWSP 661
KDLYSSD TV PVDF D S +NRGIIIVKLRRGQEL LRAIARKGIGKDHAKWSP
Sbjct: 124 KDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 183
Query: 660 AATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTYDD 481
AATVTFMYEPEI+IN E+V+SSPT+VF+I+ TQQV + DAEAYTYDD
Sbjct: 184 AATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDD 243
Query: 480 EVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSADT 301
EVLKKAEAMGKPGLVEI A++DSFIFTVE+TGA+KASQL LNAIE+LKQKLDAVRLS DT
Sbjct: 244 EVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDT 303
Query: 300 VEADEQFGELGAHMRGG 250
VEAD+QFGELGAHMRGG
Sbjct: 304 VEADDQFGELGAHMRGG 320
>gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
Length = 318
Score = 499 bits (1285), Expect = e-139
Identities = 251/319 (78%), Positives = 286/319 (89%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SY R P++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1 MEGASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC+ DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
+SKDLYSSD +VVPVDF D ++ D++++RG+IIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 SSKDLYSSDPSVVPVDFSDPAS-TDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEPEI++N E+V+SSPT+VF+I+ TQQV + D+EAY+Y
Sbjct: 180 SPAATVTFMYEPEIHLNEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDSEAYSY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEV+KKAEAMGKPGLVEI A++DSFIFTVE+TGAIK+SQL LNAIE+LKQKLDAVRLS
Sbjct: 240 DDEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEILKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>gb|AFK41039.1| unknown [Medicago truncatula]
Length = 318
Score = 499 bits (1285), Expect = e-139
Identities = 251/319 (78%), Positives = 280/319 (87%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG SY R P++KIR ++DD+MKFELR+TDAS+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1 MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLR K I DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKRITDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
+SKDL SSDHTV PVD P +++ D RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 SSKDLISSDHTVTPVDVPGGDASIES-DGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I+IN E+V+SSPT+VFDI+ TQQV + D EAY+Y
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSY 239
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
DDEV+KKAEAMGKPGL+EI AK+DSFIFTVE+TGA+KASQL LN+IE+LKQKLDAVRLS
Sbjct: 240 DDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSE 299
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318
>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1|
RBP36A [Arabidopsis lyrata subsp. lyrata]
Length = 319
Score = 494 bits (1271), Expect = e-137
Identities = 245/319 (76%), Positives = 278/319 (87%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
M+G +YQRFPKI IR ++DD+ KFELRETD S+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1 MDGATYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDV
Sbjct: 61 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 667
TS+DLYS+D TV PVDF S+ D+++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSRDLYSADPTVTPVDFTIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKGIGKDHAKW 180
Query: 666 SPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAYTY 487
SPAATVTFMYEP+I IN + +ESSPTKVF I+ T+QV + D EAYTY
Sbjct: 181 SPAATVTFMYEPDIIINEDMMDTLSDEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTY 240
Query: 486 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 307
D+EV+KKAEAMGKPGL+EIH K+DSFIFTVE+TGA+KASQL LNAI++LKQKLDAVRLS
Sbjct: 241 DEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD 300
Query: 306 DTVEADEQFGELGAHMRGG 250
DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319
>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
gi|548856809|gb|ERN14637.1| hypothetical protein
AMTR_s00038p00194050 [Amborella trichopoda]
Length = 324
Score = 492 bits (1267), Expect = e-136
Identities = 251/322 (77%), Positives = 276/322 (85%), Gaps = 3/322 (0%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEGVSYQRFPK+KIR ++DD++KFELRETD S+ANALRR+M+AEVPTIAIDLVEIE NSS
Sbjct: 1 MEGVSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 847
VLNDEF+AHRLGLIPLTSE+AM+MRFSRDCDACDGDGQCEYCSVEF L KC +DQTLDV
Sbjct: 61 VLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDV 120
Query: 846 TSKDLYSSDHTVVPVDFPD---SSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDH 676
TS DL SSD V+PVD S G D ++ RGIIIVKLRRGQEL LRAIARKGIGKDH
Sbjct: 121 TSADLVSSDIHVIPVDVAGRGMDSNGFDASEQRGIIIVKLRRGQELRLRAIARKGIGKDH 180
Query: 675 AKWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEA 496
AKWSP ATVTFMYEPEI+IN E+VESSPT+VFDI+ NT QV + D EA
Sbjct: 181 AKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVVDPEA 240
Query: 495 YTYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVR 316
YTYDDEV+KKAEAMGKPGLVEI+A+EDSFIFTVE+TGAIKASQL +NAIEVLKQKLDAVR
Sbjct: 241 YTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLDAVR 300
Query: 315 LSADTVEADEQFGELGAHMRGG 250
LS DT E DEQFGELGAHMRGG
Sbjct: 301 LSLDTEEGDEQFGELGAHMRGG 322
>gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea]
Length = 320
Score = 492 bits (1267), Expect = e-136
Identities = 257/320 (80%), Positives = 281/320 (87%), Gaps = 2/320 (0%)
Frame = -3
Query: 1206 MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1027
MEG+SYQRFPKIKIRTVRDDFMKFELR+TDASIANALRRVMI+EVPTIAIDLVEIEVN+S
Sbjct: 1 MEGISYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMISEVPTIAIDLVEIEVNTS 60
Query: 1026 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCIND-QTLD 850
VLNDEFIAHRLGLIPL S+RAMAMRFSRDCDACDGDG CEYCSVEF LRAKC ++ +TLD
Sbjct: 61 VLNDEFIAHRLGLIPLVSDRAMAMRFSRDCDACDGDGVCEYCSVEFILRAKCTDENKTLD 120
Query: 849 VTSKDLYSSDHTVVPVDFPDSSTGLDNADNRG-IIIVKLRRGQELGLRAIARKGIGKDHA 673
VTSKDL + D++V VDF S+ D+ +N+G I+IVKLR+GQEL LRAIARKGIGKDHA
Sbjct: 121 VTSKDLKNYDYSVQAVDFSYPSSRSDDQENKGGIVIVKLRQGQELVLRAIARKGIGKDHA 180
Query: 672 KWSPAATVTFMYEPEIYINXXXXXXXXXXXXXEFVESSPTKVFDINANTQQVYIYDAEAY 493
KWSPA+TVTFMYEPEIYIN EF++SSPT VF IN TQQVY+ DAEAY
Sbjct: 181 KWSPASTVTFMYEPEIYINEELMESLTLEEKQEFIDSSPTNVFAINPTTQQVYVADAEAY 240
Query: 492 TYDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRL 313
TYD+EVLKKAE MGK LVEI+AKEDSFIFTVETTGAIKASQL LNAIE+LKQKLDAVRL
Sbjct: 241 TYDEEVLKKAEGMGKARLVEINAKEDSFIFTVETTGAIKASQLLLNAIEILKQKLDAVRL 300
Query: 312 SADTVEADEQFGELGAHMRG 253
SADTVEADEQFGELGAHMRG
Sbjct: 301 SADTVEADEQFGELGAHMRG 320