BLASTX nr result
ID: Rehmannia22_contig00012969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00012969
(397 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 107 2e-21
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608... 106 3e-21
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 106 3e-21
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617... 104 1e-20
ref|XP_006481408.1| PREDICTED: uncharacterized protein LOC102613... 102 5e-20
ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610... 100 2e-19
gb|EXB29434.1| hypothetical protein L484_022105 [Morus notabilis] 100 3e-19
ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608... 100 3e-19
ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618... 99 4e-19
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626... 99 6e-19
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu] 97 2e-18
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623... 97 2e-18
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum] 96 4e-18
ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p... 96 5e-18
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 95 1e-17
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 2e-17
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc... 93 3e-17
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc... 91 1e-16
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group... 91 1e-16
gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi] 89 8e-16
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 107 bits (267), Expect = 2e-21
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDLQ-VGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+++R+ VDTGSS DILF M + + LE +T+L GF GG + P+G+I LP+++G
Sbjct: 639 ELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGVIELPITVGT 698
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
+P +T M+ F++VE S Y ++LGRP + Q V+S ++L +K+ + VG V GDQ M
Sbjct: 699 KPFERTMMLDFVVVEERSPYQMILGRPFMRISQCVISTHYLALKYRINGVVGVVKGDQRM 758
Query: 360 ARRLY 374
AR Y
Sbjct: 759 ARSCY 763
>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
Length = 1313
Score = 106 bits (265), Expect = 3e-21
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDLQ-VGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+++R+ VDTGSS DILF M + + LE +T+L GF GG + P+G+I LP+++G
Sbjct: 484 ELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGVIELPITVGT 543
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
+P +T M+ F++VE S Y ++LGRP + Q V+S ++L +K+ + VG V GDQ M
Sbjct: 544 KPFERTMMLDFVVVEERSPYQMILGRPFMRISQCVMSTHYLALKYRINGVVGVVKGDQRM 603
Query: 360 ARRLY 374
AR Y
Sbjct: 604 ARSCY 608
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 106 bits (265), Expect = 3e-21
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDLQ-VGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+++R+ VDTGSS DILF M + + LE +T+L GF GG + P+G+I LP+++G
Sbjct: 472 ELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGVIELPITVGT 531
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
+P +T M+ F++VE S Y ++LGRP + Q V+S ++L +K+ + VG V GDQ M
Sbjct: 532 KPFERTMMLDFVVVEERSPYQMILGRPFMRISQCVMSTHYLALKYRINGVVGVVKGDQRM 591
Query: 360 ARRLY 374
AR Y
Sbjct: 592 ARSCY 596
>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
Length = 1100
Score = 104 bits (259), Expect = 1e-20
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+++R+ ++ GSS DI+F M + + LE +T+L GF GG + PIG+I LP+++G
Sbjct: 338 ELRRILIEMGSSVDIVFKSTLDDMGIADLKLERTNTSLKGFGGGRLTPIGIIELPITVGT 397
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
+P +T M+ F++VE S Y ++LGRP + Q VVS ++L +K+ V VG V GDQ M
Sbjct: 398 KPFERTMMLDFVVVEERSPYEIILGRPFMRISQCVVSTHYLPLKYRVNGVVGVVKGDQRM 457
Query: 360 ARRLY 374
AR Y
Sbjct: 458 ARSCY 462
>ref|XP_006481408.1| PREDICTED: uncharacterized protein LOC102613464 [Citrus sinensis]
Length = 364
Score = 102 bits (254), Expect = 5e-20
Identities = 51/129 (39%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 RVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKEPN 188
R+ VDTGSS D+LF +++ + LE +T+L GF GG + P+GM+ LP+++G P
Sbjct: 199 RILVDTGSSVDVLFKSTLEEIGIADRKLEYTNTSLKGFGGGKLIPLGMVELPITIGSSPT 258
Query: 189 RKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMARR 368
+T M+ F++V+ S Y ++LG+P L +AV+S ++L +K+ V VG V GDQ +AR
Sbjct: 259 ERTMMLDFVVVDEESPYQMILGQPFLRMSKAVLSNHYLALKYQVNGVVGVVRGDQRIARS 318
Query: 369 LYIESIQKA 395
Y + ++A
Sbjct: 319 CYSSAAREA 327
>ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610907 [Citrus sinensis]
Length = 1231
Score = 100 bits (249), Expect = 2e-19
Identities = 48/129 (37%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 RVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKEPN 188
R+ +DTGSS D+LF ++M + + LE +T+L GF GG + P+G++ LP+++G P
Sbjct: 100 RILIDTGSSVDVLFKSTLEEMGIADLKLEYTNTSLKGFGGGKLVPLGVVELPITIGSSPK 159
Query: 189 RKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMARR 368
++T ++ F++V+ Y ++LGRP +AV+S ++L +K+ V VG V GDQ +AR
Sbjct: 160 KRTMILDFVMVDEEGPYQMILGRPFPRMSKAVLSNHYLALKYQVNGVVGVVQGDQRIARS 219
Query: 369 LYIESIQKA 395
Y + ++A
Sbjct: 220 YYSSAAREA 228
>gb|EXB29434.1| hypothetical protein L484_022105 [Morus notabilis]
Length = 363
Score = 100 bits (248), Expect = 3e-19
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = +3
Query: 6 VQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKE 182
V R+ VD GSS +L+ DC +K+ + + LE L GF G + P G I LP++ G++
Sbjct: 210 VCRILVDNGSSVGLLYADCLEKIGVPKEQLEKTSRPLYGFIGDSVIPQGTIRLPINAGEK 269
Query: 183 PNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMA 362
P T M F++++ S YN ++GR L A +A+ S+YH K+KF VGE+ +QY A
Sbjct: 270 PRHATTMANFVVIKGVSQYNAVIGRLTLQALRAITSIYHQKVKFSTPNDVGEMKSNQYEA 329
Query: 363 RRLYIESIQ 389
R Y ++++
Sbjct: 330 RVAYSDALR 338
>ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608935, partial [Citrus
sinensis]
Length = 301
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/129 (37%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 RVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKEPN 188
R+ ++TGSS D+LF ++M + LE ++T+L GF GG + P+G++ LP+++G P
Sbjct: 31 RILINTGSSVDVLFKSTLEEMGIADRKLEYINTSLKGFGGGKLVPLGVVELPITIGSSPT 90
Query: 189 RKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMARR 368
+T ++ F++V+ Y ++LGRP L +AV+S ++L +K+ V VG V GDQ +AR
Sbjct: 91 ERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYRVNGVVGVVRGDQRIARS 150
Query: 369 LYIESIQKA 395
Y + ++A
Sbjct: 151 CYSSAAREA 159
>ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618417 [Citrus sinensis]
Length = 776
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/129 (38%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 RVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKEPN 188
R+ +DTGSS D+LF ++M + LE +T+L GF GG + P+G++ LP+++G P
Sbjct: 503 RILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLGVVELPITIGSSPT 562
Query: 189 RKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMARR 368
+T M+ F++V+ Y ++LGRP L +AV+S ++L +K+ V VG V GDQ +AR
Sbjct: 563 ERTIMLDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYWVNGVVGVVRGDQRIARS 622
Query: 369 LYIESIQKA 395
Y + ++A
Sbjct: 623 CYSLAAREA 631
>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
Length = 1189
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/132 (36%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+ R+ +DTGSS D+LF ++M + LE +T+L GF GG + P+G++ LP+++G
Sbjct: 574 EFDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLGVVELPITIGS 633
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
P +T ++ F++V+ Y ++LGRP L +AV+S ++L +K+ V VG V G Q +
Sbjct: 634 SPTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYRVNGIVGVVRGGQRI 693
Query: 360 ARRLYIESIQKA 395
AR Y ++++A
Sbjct: 694 ARGCYSSAVREA 705
>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
Length = 1542
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDLQ-VGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+++R+ VDTGSS DILF M + + LE +T+L GF GG + P+G+ LP+++G
Sbjct: 562 ELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGINELPITVGS 621
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
+P + M+ F++VE S Y ++LGRP + Q V+S ++L +K+ V VG V G Q M
Sbjct: 622 KPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVISTHYLALKYRVNGVVGVVKGVQKM 681
Query: 360 ARRLY 374
R Y
Sbjct: 682 TRSCY 686
>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
Length = 1407
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/129 (37%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 RVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKEPN 188
R+ VDT SS D+LF ++M + LE +T+L GF GG + P+G++ LP+++G P
Sbjct: 686 RILVDTWSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLGVVKLPITVGSPPT 745
Query: 189 RKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMARR 368
+T ++ F++V+ Y ++LGRP L +AV+S ++L +K+ V VG V GDQ +AR
Sbjct: 746 ERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYRVNGVVGVVRGDQRIARS 805
Query: 369 LYIESIQKA 395
Y + ++A
Sbjct: 806 CYSSAAREA 814
>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
Length = 1455
Score = 96.3 bits (238), Expect = 4e-18
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Frame = +3
Query: 6 VQRVFVDTGSSADILFYDCYKKMDLQVGLETVDTA-LVGFAGGMIQPIGMITLPVSLGKE 182
V RV +DTGSS D++F + + L++ +T LVGF G + +G I L +S G+
Sbjct: 499 VSRVLIDTGSSVDVMFLPTFLALGLKIEQIVPETTPLVGFDGSTSETLGSIPLLMSWGRG 558
Query: 183 PNRKTRMIRFLIVEA-PSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
R+T+ IRF I+ A +YNV+ GRP+L F+AV SV HLK+KFP +GEV G+Q
Sbjct: 559 HLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVKFPANNGIGEVKGNQAR 618
Query: 360 ARRLYIESI 386
AR + ++
Sbjct: 619 ARECRLNTM 627
>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
protein AMTR_s04653p00000520, partial [Amborella
trichopoda]
Length = 563
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDLQV-GLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+V R+ VD GSS ++L + +K+M LQ L + +++ GF G +I GMI LP++LG
Sbjct: 285 NVHRILVDNGSSVNLLNFQAFKQMGLQEKDLRPMTSSIYGFTGDVIAIKGMIKLPITLGT 344
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
P M F +++ S+YN ++GRP L + V S+YHL MKFP VG V G Q
Sbjct: 345 APITAKSMADFAVIDQYSAYNAVIGRPILKEMKIVTSIYHLTMKFPTPSGVGSVRGVQSD 404
Query: 360 ARRLYIESIQ 389
+R Y +++
Sbjct: 405 SRECYNAAVK 414
>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/130 (39%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +3
Query: 6 VQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKE 182
+ +V VD GSS DIL+++ +KKM + + ++ + +VGF+ + G I L + G +
Sbjct: 651 IAKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQIVGFSRERVDTKGFIDLYTTFGDD 710
Query: 183 PNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFP-VGEKVGEVDGDQYM 359
KT IR+L+V A +SYN++LGRP++N +A+VS HL MKFP V + V DQ
Sbjct: 711 YLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVNGDIATVHIDQKT 770
Query: 360 ARRLYIESIQ 389
AR Y+ S++
Sbjct: 771 ARECYVASLK 780
>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1980
Score = 94.0 bits (232), Expect = 2e-17
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+VQRV +D GSSAD+LFYD +KKM + + L L GF G + IG I+L V GK
Sbjct: 765 EVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGK 824
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
N + I F +V+ P YN +LGR +N F+A++ ++ MK P V V G+Q +
Sbjct: 825 GTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPRGVITVRGEQLV 884
Query: 360 ARRLYIE 380
AR+ ++
Sbjct: 885 ARKYELQ 891
>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1889
Score = 93.2 bits (230), Expect = 3e-17
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+VQRV +D GSSAD+LFYD +KKM + + L L GF G + IG I+L V GK
Sbjct: 765 EVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGK 824
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
N + I F +V+ P YN +LGR +N F+A++ ++ MK P V V G+Q
Sbjct: 825 GTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPRGVITVRGEQLA 884
Query: 360 ARRLYIE 380
AR+ ++
Sbjct: 885 ARKYELQ 891
>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 504
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+VQRV VD GSSAD+LFYD +KKM + + L L GF G + IG I+L V G
Sbjct: 116 EVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGQQVHAIGKISLQVVFGG 175
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
N++ + F +V+ P YN +LGR +N F+A++ ++ MK P + V V G Q
Sbjct: 176 GENKRREEVVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPKGVISVRGGQLA 235
Query: 360 ARRLYIE 380
AR+ ++
Sbjct: 236 ARKFELQ 242
>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1459
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 DVQRVFVDTGSSADILFYDCYKKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGK 179
+VQRV VD GSSAD+LFYD +KKM + + L L GF G + IG I+L V G
Sbjct: 282 EVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGHQVHTIGKISLQVVFGG 341
Query: 180 EPNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYM 359
N++ + F +V+ P YN +LGR +N F+A++ ++ MK P + V V G Q
Sbjct: 342 GENKRREEVVFDVVDMPYQYNAVLGRSTINIFEAIIHHNYICMKLPGPKGVISVRGGQLA 401
Query: 360 ARRLYIE 380
AR+ ++
Sbjct: 402 ARKFELQ 408
>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
Length = 1902
Score = 88.6 bits (218), Expect = 8e-16
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +3
Query: 6 VQRVFVDTGSSADILFYDCYKKMDLQVGL-ETVDTALVGFAGGMIQPIGMITLPVSLGKE 182
V ++ VDTGSSADILF + M L L + D L GF G ++ +G I+LPV+ G +
Sbjct: 674 VTKILVDTGSSADILFASTFDSMKLDRNLLQPADNPLYGFGGQQVRAVGKISLPVTFGDQ 733
Query: 183 PNRKTRMIRFLIVEAPSSYNVMLGRPALNAFQAVVSVYHLKMKFPVGEKVGEVDGDQYMA 362
N +T I F +V+ YN + GR NAF AV+ +L MK P + V V GDQ +A
Sbjct: 734 INCRTEHITFDVVDMFYPYNAIFGRGVTNAFNAVIHPAYLCMKLPAPKGVVAVYGDQDIA 793
Query: 363 R 365
R
Sbjct: 794 R 794