BLASTX nr result
ID: Rehmannia22_contig00012894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00012894
(466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymera... 72 6e-11
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 72 1e-10
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 70 2e-10
ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymera... 70 2e-10
ref|NP_568218.1| transcription elongation factor (TFIIS) family ... 70 4e-10
dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] 70 4e-10
ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp.... 70 4e-10
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260... 69 5e-10
ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutr... 69 5e-10
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260... 69 5e-10
emb|CBI37628.3| unnamed protein product [Vitis vinifera] 69 5e-10
emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera] 69 5e-10
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr... 69 6e-10
ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymera... 69 8e-10
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis] 68 1e-09
ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymera... 68 1e-09
gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus pe... 68 1e-09
ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymera... 67 2e-09
ref|XP_003602531.1| hypothetical protein MTR_3g095380 [Medicago ... 67 2e-09
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 67 2e-09
>ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 314
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPAS--QLCQNC 212
MDS++FR+IL + V++WAL++AAI VAS+D+ EL+ RRD IVE LYA +S LC+NC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNC 60
Query: 211 SGG 203
G
Sbjct: 61 DAG 63
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNC 212
MD DEFR+IL S V++W LIE A+ VAS DY +E + RRD IVE LY P C NC
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNC 58
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPA-SQLCQNC- 212
MD D+FR+I+ + V++W I+ AI VAS DYG EL+ RRD IVE LYA + + C+NC
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 211 -SGGGVNDEVA 182
GGG E A
Sbjct: 61 FGGGGTVTEAA 71
>ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 313
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/59 (59%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYA-PASQLCQNC 212
MDS++FR+IL + V++WAL++AAI VAS D+ DEL+ RRDRIVE LYA A C+NC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNC 59
>ref|NP_568218.1| transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName:
Full=Probable mediator of RNA polymerase II
transcription subunit 26c gi|332004072|gb|AED91455.1|
transcription elongation factor (TFIIS) family protein
[Arabidopsis thaliana]
Length = 353
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPA-SQLCQNCS 209
MD D+FR+++ + V++W I+ AI VAS DYG EL+ RRD IVE LYA + + C+NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 208 GGG 200
GG
Sbjct: 61 FGG 63
>dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPA-SQLCQNCS 209
MD D+FR+++ + V++W I+ AI VAS DYG EL+ RRD IVE LYA + + C+NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 208 GGG 200
GG
Sbjct: 61 FGG 63
>ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPA-SQLCQNCS 209
MD D+FR+++ + V++W I+ AI VAS DYG EL+ RRD IVE LYA + + C+NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 208 GGG 200
GG
Sbjct: 61 FGG 63
>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCS 209
MD DEFR IL S V++W I AI VA SDYGDELRHRRD IVE +Y S C +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY--MSSRCGSCN 57
>ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutrema salsugineum]
gi|312281771|dbj|BAJ33751.1| unnamed protein product
[Thellungiella halophila] gi|557100558|gb|ESQ40921.1|
hypothetical protein EUTSA_v10013991mg [Eutrema
salsugineum]
Length = 348
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPA-SQLCQNC- 212
MD D+FR+I+ + V++W I+ AI VAS DYG EL+ RRD IVE LYA + + C+NC
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 211 -SGGGVNDEVA 182
GG+ E A
Sbjct: 61 FGSGGIVTEAA 71
>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCS 209
MD DEFR IL S V++W I AI VA SDYGDELRHRRD IVE +Y S C +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY--MSSRCGSCN 57
>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCS 209
MD DEFR IL S V++W I AI VA SDYGDELRHRRD IVE +Y S C +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY--MSSRCGSCN 57
>emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]
Length = 333
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCS 209
MD DEFR IL S V++W I AI VA SDYGDELRHRRD IVE +Y S C +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY--MSSRCGSCN 57
>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 336
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPAS-QLCQNCS 209
MD D+FR++L + V++W I+ AI VAS DYG EL+ RRDRIVE LYA + C+NC
Sbjct: 1 MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60
Query: 208 GG 203
G
Sbjct: 61 FG 62
>ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum tuberosum]
Length = 348
Score = 68.6 bits (166), Expect = 8e-10
Identities = 46/128 (35%), Positives = 58/128 (45%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCSG 206
MD DEFR ILS S+V++W +I+AAI VA+ D DE++ RRD IVE LY+ S+
Sbjct: 1 MDLDEFRLILSESKVDVWTMIDAAISVAAVDCADEMKRRRDGIVEKLYSTRSR------- 53
Query: 205 GGVNDEVAQDHRFYHTSNNFNNSSDDIGNKDKSXXXXXXXXXXXXXXXXXXXXXDFSKSP 26
SSDD+GN +KSP
Sbjct: 54 ----------------------SSDDVGN-----------GQHRLDNGTRNVEMMMNKSP 80
Query: 25 LTPESNHR 2
LTPESN R
Sbjct: 81 LTPESNQR 88
>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
Length = 418
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/92 (42%), Positives = 50/92 (54%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCSG 206
MD D+FRAIL S V++W I+ AI VAS DYG ELR RRD IVE LYA +S
Sbjct: 1 MDYDDFRAILDSSGVDVWTFIDTAIAVASMDYGGELRQRRDGIVERLYAASS-------- 52
Query: 205 GGVNDEVAQDHRFYHTSNNFNNSSDDIGNKDK 110
A DH H +++ + G K++
Sbjct: 53 ----SSSASDH---HRPRHYDREAKTAGEKER 77
>ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cicer arietinum]
Length = 356
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQ--LCQNC 212
MD D+FR+IL + V++W I+ AI VAS D EL+ RRD IVE LYA + LCQNC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDTAISVASQDNAAELKRRRDGIVERLYAATTSPPLCQNC 60
Query: 211 SGG 203
GG
Sbjct: 61 DGG 63
>gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus persica]
Length = 335
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQ--LCQNC 212
MD D+ R IL S V++W I+ AI VAS DYG EL+HRRD IVE LYA C NC
Sbjct: 1 MDHDDLRTILETSGVDVWTFIDTAIVVASVDYGTELKHRRDGIVERLYATTCMPPRCPNC 60
Query: 211 SGGGVN 194
G N
Sbjct: 61 DTDGPN 66
>ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum lycopersicum]
Length = 349
Score = 67.0 bits (162), Expect = 2e-09
Identities = 46/128 (35%), Positives = 57/128 (44%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNCSG 206
MD DEFR ILS S+V++W +++AAI VA+ D DEL+ RRD IVE LY S+
Sbjct: 1 MDLDEFRLILSESKVDVWTMMDAAISVAAVDCADELKRRRDGIVEKLYFTRSR------- 53
Query: 205 GGVNDEVAQDHRFYHTSNNFNNSSDDIGNKDKSXXXXXXXXXXXXXXXXXXXXXDFSKSP 26
SSDD+GN +KSP
Sbjct: 54 ----------------------SSDDVGN-----------GQHRLDNGTRNVEMMMNKSP 80
Query: 25 LTPESNHR 2
LTPESN R
Sbjct: 81 LTPESNQR 88
>ref|XP_003602531.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491579|gb|AES72782.1| hypothetical protein
MTR_3g095380 [Medicago truncatula]
Length = 226
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQ---LCQN 215
MD D+FR+IL + V++W I+ AI VA+ D EL+ RRD IVE LYA +++ +CQN
Sbjct: 1 MDLDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQN 60
Query: 214 CSGG 203
C GG
Sbjct: 61 CDGG 64
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = -1
Query: 385 MDSDEFRAILSRSRVEIWALIEAAIRVASSDYGDELRHRRDRIVESLYAPASQLCQNC 212
MD D+FR+IL S V++W I+ AI VAS D+G+EL+ RRD+IVE LY+ +S C+NC
Sbjct: 1 MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYS-SSGRCRNC 57