BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00012729
         (1880 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS66947.1| hypothetical protein M569_07825, partial [Genlise...   801   0.0  
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   721   0.0  
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   720   0.0  
ref|XP_006363979.1| PREDICTED: pentatricopeptide repeat-containi...   717   0.0  
ref|XP_004235474.1| PREDICTED: pentatricopeptide repeat-containi...   711   0.0  
ref|XP_004301456.1| PREDICTED: pentatricopeptide repeat-containi...   680   0.0  
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...   667   0.0  
ref|XP_002515835.1| pentatricopeptide repeat-containing protein,...   662   0.0  
gb|EOY16969.1| Tetratricopeptide repeat (TPR)-like superfamily p...   647   0.0  
gb|EOY16968.1| Tetratricopeptide repeat (TPR)-like superfamily p...   647   0.0  
ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containi...   646   0.0  
ref|NP_197188.1| pentatricopeptide repeat-containing protein [Ar...   636   e-180
gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis]     635   e-179
ref|XP_006287060.1| hypothetical protein CARUB_v10000209mg [Caps...   630   e-178
ref|XP_002871739.1| pentatricopeptide repeat-containing protein ...   628   e-177
gb|ESW13450.1| hypothetical protein PHAVU_008G197200g [Phaseolus...   626   e-176
gb|EMJ05817.1| hypothetical protein PRUPE_ppa002349mg [Prunus pe...   620   e-175
ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-175
ref|XP_006400228.1| hypothetical protein EUTSA_v10012670mg [Eutr...   611   e-172
ref|XP_003637572.1| Pentatricopeptide repeat-containing protein ...   573   e-160

>gb|EPS66947.1| hypothetical protein M569_07825, partial [Genlisea aurea]
          Length = 779

 Score =  801 bits (2070), Expect = 0.0
 Identities = 391/528 (74%), Positives = 451/528 (85%)
 Frame = +3

Query: 297  FYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            +YWN +I+  +   +QR AL +FDEMRRL W+PD YTYP+VFKACGDLS L  G SVHAL
Sbjct: 16   YYWNKIIRRCLFSGEQRKALLVFDEMRRLGWVPDEYTYPFVFKACGDLSLLTTGVSVHAL 75

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
            ALV GY  SNVFV NAA+AMYGRCG Y +A QLFDEML  G+FDT+SWNSIISVYVQIGE
Sbjct: 76   ALVFGYAASNVFVGNAAIAMYGRCGEYSRAHQLFDEMLMLGVFDTVSWNSIISVYVQIGE 135

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFV 836
             ++A +MF++MVS  D  L+ADAVSLVN+LPACAS++  R+G EIH +A+RRGL+ED+FV
Sbjct: 136  CKRAFQMFQEMVSYRDADLQADAVSLVNILPACASLRSKRSGKEIHGFAMRRGLVEDMFV 195

Query: 837  GNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGI 1016
            GNAIVDMY+KCG ++EA++VFDRMEVKDVVSWNALVTGY+Q G+FD AL  F  M++  I
Sbjct: 196  GNAIVDMYSKCGFLNEAQHVFDRMEVKDVVSWNALVTGYAQFGRFDDALGFFRSMKENNI 255

Query: 1017 GLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKE 1196
             LNVVTWSAVI++YAQRGLG EALDVFR+MI SGS+PN+VTL+SVLSGCAA GAL QGKE
Sbjct: 256  ALNVVTWSAVISSYAQRGLGNEALDVFRDMIASGSRPNSVTLISVLSGCAAVGALAQGKE 315

Query: 1197 TQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVM 1376
            T C   K+FLNL GNDPGDEMMVINGLIDMYAKC+NF  ARA+FDSI+ K RSVVTWTVM
Sbjct: 316  THCCAFKQFLNLIGNDPGDEMMVINGLIDMYAKCKNFRVARAVFDSIQTKHRSVVTWTVM 375

Query: 1377 IGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRN 1556
            IGGYAQHG++SDAL L SEM+SDK R+MPNGFTISCALVACAR+GALRLG+EIHGYALR 
Sbjct: 376  IGGYAQHGDSSDALMLLSEMVSDKRRLMPNGFTISCALVACARLGALRLGKEIHGYALRR 435

Query: 1557 RYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEI 1736
            RY EAM FISNCLIDMY KSGDV  ARAVFD M  KN VSWTS+MTGYGLHGR DE L++
Sbjct: 436  RYGEAMQFISNCLIDMYTKSGDVDGARAVFDGMKPKNVVSWTSMMTGYGLHGRADEVLQL 495

Query: 1737 FTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVPE 1880
            F  M  AG P+DGVTFVVVLYACSHSGM+D+G++YFNNM KDFG+VPE
Sbjct: 496  FNLMTAAGLPVDGVTFVVVLYACSHSGMVDRGLDYFNNMEKDFGVVPE 543



 Score =  190 bits (483), Expect = 2e-45
 Identities = 157/547 (28%), Positives = 247/547 (45%), Gaps = 47/547 (8%)
 Frame = +3

Query: 303  WNNLIKWSVSLQDQRNALHLFDEM---RRLDWIPDGYTYPYVFKACGDLSSLVIGESVHA 473
            WN++I   V + + + A  +F EM   R  D   D  +   +  AC  L S   G+ +H 
Sbjct: 123  WNSIISVYVQIGECKRAFQMFQEMVSYRDADLQADAVSLVNILPACASLRSKRSGKEIHG 182

Query: 474  LALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEM---------------LERGLFD 608
             A+  G  + ++FV NA V MY +CG  ++AQ +FD M                + G FD
Sbjct: 183  FAMRRGLVE-DMFVGNAIVDMYSKCGFLNEAQHVFDRMEVKDVVSWNALVTGYAQFGRFD 241

Query: 609  -----------------TISWNSIISVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLV 737
                              ++W+++IS Y Q G   +AL +F  M++ G    R ++V+L+
Sbjct: 242  DALGFFRSMKENNIALNVVTWSAVISSYAQRGLGNEALDVFRDMIASGS---RPNSVTLI 298

Query: 738  NVLPACASVKYWRTGIEIHAYAIRRGLL-------EDVFVGNAIVDMYAKCGLMDEAKNV 896
            +VL  CA+V     G E H  A ++ L        +++ V N ++DMYAKC     A+ V
Sbjct: 299  SVLSGCAAVGALAQGKETHCCAFKQFLNLIGNDPGDEMMVINGLIDMYAKCKNFRVARAV 358

Query: 897  FDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLG 1076
            FD ++ K                                   +VVTW+ +I  YAQ G  
Sbjct: 359  FDSIQTKH---------------------------------RSVVTWTVMIGGYAQHGDS 385

Query: 1077 YEALDVFREMIVSGSQ--PNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPG 1250
             +AL +  EM+    +  PN  T+   L  CA  GAL  GKE   Y ++R         G
Sbjct: 386  SDALMLLSEMVSDKRRLMPNGFTISCALVACARLGALRLGKEIHGYALRRRY-------G 438

Query: 1251 DEMMVI-NGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLF 1427
            + M  I N LIDMY K  +   ARA+FD +  K ++VV+WT M+ GY  HG A + L LF
Sbjct: 439  EAMQFISNCLIDMYTKSGDVDGARAVFDGM--KPKNVVSWTSMMTGYGLHGRADEVLQLF 496

Query: 1428 SEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMY 1607
            + M +    +  +G T    L AC+  G +  G +      ++      +    C+ D+ 
Sbjct: 497  NLMTA--AGLPVDGVTFVVVLYACSHSGMVDRGLDYFNNMEKDFGVVPEVEHYACMADLL 554

Query: 1608 AKSGDVVAARAVFDNMIMK-NEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGV-T 1781
             ++G +  A  +  +M M+ N V W ++++G  LHG  + A      +    F  DG+ T
Sbjct: 555  GRAGRLDDAVDLIRDMPMEPNAVVWVALLSGCRLHGNVELAEHAARKLLELNFENDGLYT 614

Query: 1782 FVVVLYA 1802
             +  +YA
Sbjct: 615  LLSNIYA 621



 Score =  114 bits (286), Expect = 1e-22
 Identities = 113/422 (26%), Positives = 166/422 (39%), Gaps = 118/422 (27%)
 Frame = +3

Query: 921  VVSWNALVTGYSQIGKFDVALRLFERMRKEG----------------------------- 1013
            V  WN ++      G+   AL +F+ MR+ G                             
Sbjct: 15   VYYWNKIIRRCLFSGEQRKALLVFDEMRRLGWVPDEYTYPFVFKACGDLSLLTTGVSVHA 74

Query: 1014 -------IGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSG------------------ 1118
                      NV   +A IA Y + G    A  +F EM++ G                  
Sbjct: 75   LALVFGYAASNVFVGNAAIAMYGRCGEYSRAHQLFDEMLMLGVFDTVSWNSIISVYVQIG 134

Query: 1119 -------------------SQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGN 1241
                                Q +AV+LV++L  CA+  +   GKE   + ++R L     
Sbjct: 135  ECKRAFQMFQEMVSYRDADLQADAVSLVNILPACASLRSKRSGKEIHGFAMRRGL----- 189

Query: 1242 DPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALG 1421
               ++M V N ++DMY+KC     A+ +FD +E KD  VV+W  ++ GYAQ G   DALG
Sbjct: 190  --VEDMFVGNAIVDMYSKCGFLNEAQHVFDRMEVKD--VVSWNALVTGYAQFGRFDDALG 245

Query: 1422 LFSEMLSDKCRM---------------------------------MPNGFTISCALVACA 1502
             F  M  +   +                                  PN  T+   L  CA
Sbjct: 246  FFRSMKENNIALNVVTWSAVISSYAQRGLGNEALDVFRDMIASGSRPNSVTLISVLSGCA 305

Query: 1503 RIGALRLGREIHGYALR-------NRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIM 1661
             +GAL  G+E H  A +       N   + M+ I N LIDMYAK  +   ARAVFD++  
Sbjct: 306  AVGALAQGKETHCCAFKQFLNLIGNDPGDEMMVI-NGLIDMYAKCKNFRVARAVFDSIQT 364

Query: 1662 KNE--VSWTSIMTGYGLHGRGDEALEIFTGM---RRAGFPIDGVTFVVVLYACSHSGMID 1826
            K+   V+WT ++ GY  HG   +AL + + M   +R   P +G T    L AC+  G + 
Sbjct: 365  KHRSVVTWTVMIGGYAQHGDSSDALMLLSEMVSDKRRLMP-NGFTISCALVACARLGALR 423

Query: 1827 QG 1832
             G
Sbjct: 424  LG 425


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Vitis vinifera]
          Length = 852

 Score =  721 bits (1861), Expect = 0.0
 Identities = 359/589 (60%), Positives = 447/589 (75%)
 Frame = +3

Query: 111  SSSTAQQCYFLPEDEPIQHQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXX 290
            +S+   QC  L   E I  Q ++     P+     +S +L+ +  + A            
Sbjct: 32   TSTLFHQCKSLASAELIHQQLLV--QGLPHDPTHIISMYLTFNSPAKALSVLRRLHPSSH 89

Query: 291  XXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVH 470
              F+WN LI+ SV L    + L L+  M+RL W PD YT+P+V KACG++ S   G SVH
Sbjct: 90   TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 149

Query: 471  ALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQI 650
            A+   SG+ + NVFV N  V+MYGRCGA++ A+Q+FDEM ERG+ D +SWNSI++ Y+Q 
Sbjct: 150  AVVFASGF-EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 208

Query: 651  GEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDV 830
            G+  +A++MFE+M    D+ +R DAVSLVNVLPACASV  W  G ++H YA+R GL EDV
Sbjct: 209  GDSIRAMKMFERMTE--DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266

Query: 831  FVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKE 1010
            FVGNA+VDMYAKCG+M+EA  VF+RM+VKDVVSWNA+VTGYSQIG+FD AL LFE++R+E
Sbjct: 267  FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326

Query: 1011 GIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQG 1190
             I LNVVTWSAVIA YAQRGLG+EALDVFR+M + GS+PN VTLVS+LSGCA  G L+ G
Sbjct: 327  KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHG 386

Query: 1191 KETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWT 1370
            KET C+ IK  LNL+ NDPGD++MVIN LIDMY+KC++   ARAMFD I  KDRSVVTWT
Sbjct: 387  KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 446

Query: 1371 VMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYAL 1550
            V+IGG AQHGEA++AL LFS+ML     +MPN FTISCAL+ACAR+GALR GR+IH Y L
Sbjct: 447  VLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL 506

Query: 1551 RNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEAL 1730
            RNR+E AM+F++NCLIDMY+KSGDV AAR VFDNM  +N VSWTS+MTGYG+HGRG+EAL
Sbjct: 507  RNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEAL 566

Query: 1731 EIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            +IF  M++ G   DGVTFVVVLYACSHSGM+DQG+NYFN M KDFG+VP
Sbjct: 567  QIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVP 615



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
 Frame = +3

Query: 303  WNNLIKWSVSLQDQRNALHLFDEMRRLD--WIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            W  LI  +    +   AL LF +M + D   +P+ +T      AC  L +L  G  +HA 
Sbjct: 445  WTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAY 504

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
             L + +  + +FV N  + MY + G  D A+ +FD M +R   + +SW S+++ Y   G 
Sbjct: 505  VLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR---NGVSWTSLMTGYGMHGR 561

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIE-IHAYAIRRGLLEDVF 833
              +AL++F +M   G   L  D V+ V VL AC+       GI   +      G++    
Sbjct: 562  GEEALQIFYEMQKVG---LVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 618

Query: 834  VGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVS-WNALVT 947
                +VD+ ++ G +DEA  +   M +K   + W AL++
Sbjct: 619  HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLS 657


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  720 bits (1859), Expect = 0.0
 Identities = 358/589 (60%), Positives = 449/589 (76%)
 Frame = +3

Query: 111  SSSTAQQCYFLPEDEPIQHQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXX 290
            +S+   QC  L   E + HQ ++     P+     +S +L+ +  + A            
Sbjct: 51   TSTLFHQCKSLASAE-LTHQQLL-VQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPSSH 108

Query: 291  XXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVH 470
              F+WN LI+ SV L    + L L+  M+RL W PD YT+P+V KACG++ S   G SVH
Sbjct: 109  TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 168

Query: 471  ALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQI 650
            A+   SG+ + NVFV N  V+MYGRCGA++ A+Q+FDEM ERG+ D +SWNSI++ Y+Q 
Sbjct: 169  AVVFASGF-EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 227

Query: 651  GEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDV 830
            G+  +A++MFE+M    D+ +R DAVSLVNVLPACASV  W  G ++H YA+R GL EDV
Sbjct: 228  GDSIRAMKMFERMTE--DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 285

Query: 831  FVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKE 1010
            FVGNA+VDMYAKCG+M+EA  VF+RM+VKDVVSWNA+VTGYSQIG+FD AL LFE++R+E
Sbjct: 286  FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 345

Query: 1011 GIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQG 1190
             I LNVVTWSAVIA YAQRGLG+EALDVFR+M++ GS+PN VTLVS+LSGCA+ G L+ G
Sbjct: 346  KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHG 405

Query: 1191 KETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWT 1370
            KET C+ IK  LNL+ NDPGD++MVIN LIDMY+KC++   ARAMFD I  KDRSVVTWT
Sbjct: 406  KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 465

Query: 1371 VMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYAL 1550
            V+IGG AQHGEA++AL LFS+ML     +MPN FTISCAL+ACAR+GALR GR+IH Y L
Sbjct: 466  VLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL 525

Query: 1551 RNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEAL 1730
            RNR+E AM+F++NCLIDMY+KSGDV AAR VFDNM  +N VSWTS+MTGYG+HGRG+EAL
Sbjct: 526  RNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEAL 585

Query: 1731 EIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            +IF  M++     DGVTFVVVLYACSHSGM+DQG+NYFN M KDFG+VP
Sbjct: 586  QIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVP 634



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
 Frame = +3

Query: 303  WNNLIKWSVSLQDQRNALHLFDEMRRLD--WIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            W  LI  +    +   AL LF +M + D   +P+ +T      AC  L +L  G  +HA 
Sbjct: 464  WTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAY 523

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
             L + +  + +FV N  + MY + G  D A+ +FD M +R   + +SW S+++ Y   G 
Sbjct: 524  VLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR---NGVSWTSLMTGYGMHGR 580

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIE-IHAYAIRRGLLEDVF 833
              +AL++F +M     + L  D V+ V VL AC+       GI   +      G++    
Sbjct: 581  GEEALQIFYEMQK---VXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 637

Query: 834  VGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVS-WNALVT 947
                +VD+ ++ G +DEA  +   M +K   + W AL++
Sbjct: 638  HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLS 676


>ref|XP_006363979.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            isoform X1 [Solanum tuberosum]
            gi|565396768|ref|XP_006363980.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g16860-like isoform X2 [Solanum tuberosum]
          Length = 843

 Score =  717 bits (1852), Expect = 0.0
 Identities = 352/527 (66%), Positives = 419/527 (79%)
 Frame = +3

Query: 297  FYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            FYWNNLIK SV L+   +AL LF EM RLDW  DGYTYPYV KACG+L  L+ GESVH+L
Sbjct: 81   FYWNNLIKRSVILRHHESALVLFREMLRLDWNADGYTYPYVLKACGELRFLLCGESVHSL 140

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
             L SG  DSNVFV N  +AMYG+CG    A+Q+FDE + R   D ISWNSI++ YVQ  E
Sbjct: 141  ILASGL-DSNVFVCNGVIAMYGKCGLLGHARQVFDETVVRETADVISWNSIVAAYVQKDE 199

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFV 836
             +K L +F+ MVS     LR DAVSLVNVLPAC S+  W+ G ++  YAIRR L EDVFV
Sbjct: 200  DKKVLELFDSMVSLNSFELRPDAVSLVNVLPACGSLGAWKRGKQLQGYAIRRCLHEDVFV 259

Query: 837  GNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGI 1016
            GNAIVDMYAKC  +D+A  VF+ MEVKDVVSWNALVTGYSQIG+FD AL LFERMR+E I
Sbjct: 260  GNAIVDMYAKCKRLDDANKVFELMEVKDVVSWNALVTGYSQIGRFDEALGLFERMREEEI 319

Query: 1017 GLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKE 1196
             LNVVTWSAVI+ YAQR LGYEAL++F+ M +SG++PN +TLVSVLSGCAA GAL QGKE
Sbjct: 320  DLNVVTWSAVISGYAQRDLGYEALNIFKGMRLSGAEPNVITLVSVLSGCAAIGALRQGKE 379

Query: 1197 TQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVM 1376
            T CY IKR  +LEG++  +++MV N LIDMYAKC+    A AMFD I+R+DR+VVTWTVM
Sbjct: 380  THCYAIKRMFSLEGSNTEEDLMVTNALIDMYAKCKEMKIAHAMFDDIDRRDRNVVTWTVM 439

Query: 1377 IGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRN 1556
            IGGYAQHG+A+DAL LFS ML D+  ++PN +TISCALVACAR+ +LR+GR+IH Y LR 
Sbjct: 440  IGGYAQHGDANDALELFSAMLKDEYSVIPNAYTISCALVACARLSSLRIGRQIHAYVLRQ 499

Query: 1557 RYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEI 1736
             YE  ++F++NCLIDMYAKSGDV AAR VFDNM  +N VSWTS+MTGYG+HGRG+EAL++
Sbjct: 500  GYEPTIVFVANCLIDMYAKSGDVDAARLVFDNMSQRNTVSWTSLMTGYGMHGRGEEALQV 559

Query: 1737 FTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            F  MR  G PIDGVTF+VVLYACSHSGM+D+GMNYFN+M  DFG+VP
Sbjct: 560  FNVMRGEGLPIDGVTFLVVLYACSHSGMVDKGMNYFNHMKGDFGVVP 606



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 10/223 (4%)
 Frame = +3

Query: 309  NLIKWSVSLQ------DQRNALHLFDEMRRLDW--IPDGYTYPYVFKACGDLSSLVIGES 464
            N++ W+V +       D  +AL LF  M + ++  IP+ YT      AC  LSSL IG  
Sbjct: 432  NVVTWTVMIGGYAQHGDANDALELFSAMLKDEYSVIPNAYTISCALVACARLSSLRIGRQ 491

Query: 465  VHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYV 644
            +HA  L  GY  + VFV N  + MY + G  D A+ +FD M +R   +T+SW S+++ Y 
Sbjct: 492  IHAYVLRQGYEPTIVFVANCLIDMYAKSGDVDAARLVFDNMSQR---NTVSWTSLMTGYG 548

Query: 645  QIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRR-GLL 821
              G   +AL++F  M   G   L  D V+ + VL AC+       G+    +     G++
Sbjct: 549  MHGRGEEALQVFNVMRGEG---LPIDGVTFLVVLYACSHSGMVDKGMNYFNHMKGDFGVV 605

Query: 822  EDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDV-VSWNALVT 947
                    ++D+  + G +DEA  + +RM ++   V W AL++
Sbjct: 606  PGAEHYACMIDILGRAGRLDEAMKLIERMPMEPTSVVWVALLS 648


>ref|XP_004235474.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Solanum lycopersicum]
          Length = 843

 Score =  711 bits (1836), Expect = 0.0
 Identities = 347/527 (65%), Positives = 420/527 (79%)
 Frame = +3

Query: 297  FYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            FYWNNLIK  V L+   +AL LF EM RLDW PDGYTYPY+ KACG+L  L+ GESVH+L
Sbjct: 81   FYWNNLIKRCVLLRHHESALVLFREMLRLDWNPDGYTYPYILKACGELRFLLFGESVHSL 140

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
             L SG  DSNVFV N  +AMYG+CG    A+Q+FD+ +ER   D ISWNSI++ YVQ  E
Sbjct: 141  ILSSGL-DSNVFVCNGLIAMYGKCGLLGHARQVFDKTVERVTADVISWNSIVAAYVQKDE 199

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFV 836
             +K L +F+ MV+     LR DAVSLVNVLPAC S+  W+ G ++  YAIRR L ED+FV
Sbjct: 200  DKKVLELFDLMVALNSFELRPDAVSLVNVLPACGSLGAWKRGKQLQGYAIRRCLHEDIFV 259

Query: 837  GNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGI 1016
            GNAIVDMYAKC  +D+A  VF+ MEVKDVVSWNALVTGYSQIG+FD AL LFERMR+E I
Sbjct: 260  GNAIVDMYAKCKRLDDANKVFELMEVKDVVSWNALVTGYSQIGRFDEALGLFERMREEKI 319

Query: 1017 GLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKE 1196
             LNVVTWSAVI+ YAQR LGYEAL++F+EM +SG++PN +TLVSVLSGCAA GAL QGKE
Sbjct: 320  DLNVVTWSAVISGYAQRDLGYEALNIFKEMRLSGAEPNVITLVSVLSGCAAIGALRQGKE 379

Query: 1197 TQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVM 1376
            T CY IK+ L+LEG++  +++MV N LIDMYAKC+    A+AMFD I+R+ R+VVTWTVM
Sbjct: 380  THCYAIKQILSLEGSNTEEDLMVTNALIDMYAKCKEMKIAQAMFDDIDRRGRNVVTWTVM 439

Query: 1377 IGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRN 1556
            IGGYAQHG+A+DAL LFS ML D+  ++PN +TISCALVACAR+ +LR+GR+IH Y LR 
Sbjct: 440  IGGYAQHGDANDALELFSAMLKDEYSVIPNAYTISCALVACARLSSLRIGRQIHAYVLRQ 499

Query: 1557 RYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEI 1736
              E   +F++NCLIDMY+KSGDV AAR VFDNM  +N VSWTS+MTGYG+HGRG+EAL++
Sbjct: 500  GCEPTKVFVANCLIDMYSKSGDVDAARLVFDNMSQRNAVSWTSLMTGYGMHGRGEEALQV 559

Query: 1737 FTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            F  MR  G PIDGVTF+VVLYACSHSGM+D+GMNYFN+M  DFG+VP
Sbjct: 560  FNVMRGEGLPIDGVTFLVVLYACSHSGMVDEGMNYFNHMQGDFGVVP 606



 Score = 93.6 bits (231), Expect = 3e-16
 Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
 Frame = +3

Query: 309  NLIKWSVSLQ------DQRNALHLFDEMRRLDW--IPDGYTYPYVFKACGDLSSLVIGES 464
            N++ W+V +       D  +AL LF  M + ++  IP+ YT      AC  LSSL IG  
Sbjct: 432  NVVTWTVMIGGYAQHGDANDALELFSAMLKDEYSVIPNAYTISCALVACARLSSLRIGRQ 491

Query: 465  VHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYV 644
            +HA  L  G   + VFV N  + MY + G  D A+ +FD M +R   + +SW S+++ Y 
Sbjct: 492  IHAYVLRQGCEPTKVFVANCLIDMYSKSGDVDAARLVFDNMSQR---NAVSWTSLMTGYG 548

Query: 645  QIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRR-GLL 821
              G   +AL++F  M   G   L  D V+ + VL AC+       G+    +     G++
Sbjct: 549  MHGRGEEALQVFNVMRGEG---LPIDGVTFLVVLYACSHSGMVDEGMNYFNHMQGDFGVV 605

Query: 822  EDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDV-VSWNALVTGYSQIGKFDVALRLFER 998
                    ++D+  + G +DEA  + +RM ++   V W AL++        D+A     +
Sbjct: 606  PGAEHYACMIDILGRAGRLDEAMKLIERMPMEPTSVVWVALLSACRVHKNVDLAEHAAAK 665

Query: 999  MRK 1007
            + K
Sbjct: 666  LSK 668


>ref|XP_004301456.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Fragaria vesca subsp. vesca]
          Length = 850

 Score =  680 bits (1755), Expect = 0.0
 Identities = 338/572 (59%), Positives = 427/572 (74%), Gaps = 1/572 (0%)
 Frame = +3

Query: 165  HQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXXXXFYW-NNLIKWSVSLQD 341
            HQH++      ++    ++ +LS +  S A               YW N LI+ +V    
Sbjct: 45   HQHILVCGGVSHSLTHLIAAYLSFNAPSHALSLLERLATPRPAAVYWWNVLIRSAVRSGF 104

Query: 342  QRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDN 521
              + L L+  M+RL W PD YTYP+VFKACG+L SL  GE+ H    V G+ +SNVFV N
Sbjct: 105  LEHVLSLYSRMQRLGWKPDHYTYPFVFKACGELGSLRRGEAAHGAVCVGGF-ESNVFVCN 163

Query: 522  AAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRG 701
            A VAMYGRCG    A+++FDEMLERG+ D +SWNSI++VY Q G+   A+ +F  MV  G
Sbjct: 164  AMVAMYGRCGGLGDARKVFDEMLERGVEDIVSWNSIMAVYAQSGDSGNAVEVFGLMV--G 221

Query: 702  DIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMD 881
               +  DAVSLVNVLP CAS+   + G++IH Y ++ GL+EDVFVGN+++DMYAKCG+MD
Sbjct: 222  GFGVNPDAVSLVNVLPLCASLGEVKWGMQIHGYGVKSGLVEDVFVGNSVIDMYAKCGMMD 281

Query: 882  EAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYA 1061
            EA NVFDRM +KDVVSWNA+VTGYSQIG+F+ A+ LFE+MR+E I LNVVTWSAVIA YA
Sbjct: 282  EANNVFDRMRIKDVVSWNAMVTGYSQIGRFENAIGLFEKMREEKIELNVVTWSAVIAGYA 341

Query: 1062 QRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGN 1241
            QRG GY+A+DVFREM+  GS+PN VTLVS+LSGCA+ GAL  G+ET  Y IK  L LEGN
Sbjct: 342  QRGHGYQAVDVFREMMACGSEPNVVTLVSLLSGCASAGALNLGRETHGYAIKWMLELEGN 401

Query: 1242 DPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALG 1421
            DPG++MMVINGLIDMY KC++   AR +FDS+    +SVVTWTVMIGGYAQHGEA++AL 
Sbjct: 402  DPGNDMMVINGLIDMYTKCKSVKLARTIFDSLSPDTKSVVTWTVMIGGYAQHGEANEALE 461

Query: 1422 LFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLID 1601
            LF +ML     + PNGFTI CAL++CAR+GALR G+EIH Y LRN+Y+   ++++NCLID
Sbjct: 462  LFYQMLRQDFNLKPNGFTICCALMSCARLGALRSGKEIHAYILRNQYDSMKLYVANCLID 521

Query: 1602 MYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVT 1781
            MY+KSGDV AAR VFDN+  +NEVSWTS+MTGYG+HGRG+EAL+IF  M+R G   D VT
Sbjct: 522  MYSKSGDVDAARVVFDNLEHRNEVSWTSLMTGYGMHGRGEEALQIFDEMQRLGLVPDAVT 581

Query: 1782 FVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            ++VVLYACSHSGMID+GM YFN M+K+ G+VP
Sbjct: 582  YLVVLYACSHSGMIDEGMRYFNGMSKNSGVVP 613


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Cucumis sativus] gi|449479088|ref|XP_004155501.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  667 bits (1722), Expect = 0.0
 Identities = 318/527 (60%), Positives = 416/527 (78%)
 Frame = +3

Query: 297  FYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            F+WN LI+ SV L    + L  + +M+RL W+PD YT+P+V KACG++ SL  G SVHA+
Sbjct: 93   FWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAI 152

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
               +G   SNVF+ N+ VAMYGRCGA D A Q+FDE+LER + D +SWNSI++ YVQ G+
Sbjct: 153  VCANGL-GSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQ 211

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFV 836
             R ALR+  +M +   + LR DA++LVN+LPACASV   + G ++H +++R GL++DVFV
Sbjct: 212  SRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFV 271

Query: 837  GNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGI 1016
            GNA+V MYAKC  M+EA  VF+ ++ KDVVSWNA+VTGYSQIG FD AL LF+ M++E I
Sbjct: 272  GNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI 331

Query: 1017 GLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKE 1196
             L+V+TWSAVIA YAQ+G G+EALDVFR+M + G +PN VTL S+LSGCA+ GAL+ GK+
Sbjct: 332  KLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQ 391

Query: 1197 TQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVM 1376
            T  YVIK  LNL  ND  D+++V+NGLIDMYAKC+++  AR++FDSIE KD++VVTWTVM
Sbjct: 392  THAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVM 451

Query: 1377 IGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRN 1556
            IGGYAQHGEA+DAL LF+++   K  + PN FT+SCAL+ACAR+G LRLGR++H YALRN
Sbjct: 452  IGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRN 511

Query: 1557 RYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEI 1736
              E  ++++ NCLIDMY+KSGD+ AARAVFDNM ++N VSWTS+MTGYG+HGRG+EAL +
Sbjct: 512  ENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHL 571

Query: 1737 FTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            F  M++ GF +DG+TF+VVLYACSHSGM+DQGM YF++M K FGI P
Sbjct: 572  FDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITP 618


>ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544990|gb|EEF46504.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score =  662 bits (1708), Expect = 0.0
 Identities = 331/586 (56%), Positives = 435/586 (74%), Gaps = 1/586 (0%)
 Frame = +3

Query: 111  SSSTAQQCYFLPEDEPIQHQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXX 290
            S +  +QC  + +   I HQ  I      + + + +S +L+ +  S A            
Sbjct: 44   SPTLLKQCKSIFQSHLI-HQQAIVQGLLSHFSLNLISTYLALNAPSHALSLLQCLTPSPS 102

Query: 291  XXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVH 470
              ++WN LI+ +V L   +++L LF  MRRL+W PD YT+P+VFKACG+L S + G  +H
Sbjct: 103  AVYWWNALIRRAVRLGLLQHSLSLFRTMRRLNWSPDHYTFPFVFKACGELPSFLHGSCIH 162

Query: 471  ALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQI 650
            A+   +G+ DSNVFV NA VAMYGRCGA   A+Q+FDE+L   +FD +SWNS+I+VY+Q 
Sbjct: 163  AIVCSTGF-DSNVFVCNAVVAMYGRCGASSYARQMFDELLMGEVFDLVSWNSMIAVYLQS 221

Query: 651  GEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDV 830
            G+ +  + +F +M   G+  +  DAVSLVNVLPACAS+  W  G ++H +AIR GL EDV
Sbjct: 222  GDLKSGIELFRRMWKVGEFDIVPDAVSLVNVLPACASMGDWLCGKQVHGFAIRYGLFEDV 281

Query: 831  FVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKE 1010
            FV N++VDMYAKCGLM  A  VFDRM+ KDVVSWNA+VTGYSQIGKF+ AL LFE+MR+E
Sbjct: 282  FVANSLVDMYAKCGLMCIANKVFDRMQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMREE 341

Query: 1011 GIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQG 1190
             I L+VV+WSAVIA YAQRGLGYEAL+VFR+M V G +PN VTLVS+LSGCA+ GAL+ G
Sbjct: 342  KIQLDVVSWSAVIAGYAQRGLGYEALNVFRQMQVCGLRPNEVTLVSLLSGCASVGALLHG 401

Query: 1191 KETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWT 1370
            KET CY IK  LN + +DP DE++V+N +IDMY KC++    RA+F+SI  KDR+VVTWT
Sbjct: 402  KETHCYSIKCVLNFDRSDPRDELLVVNAIIDMYTKCKDINVGRAIFNSIPPKDRNVVTWT 461

Query: 1371 VMIGGYAQHGEASDALGLFSEMLSDKCR-MMPNGFTISCALVACARIGALRLGREIHGYA 1547
             MIGGYAQHGEA+DAL LFS+ML    R + PN FTISCAL+ACAR+ ALR GR+IH + 
Sbjct: 462  AMIGGYAQHGEANDALELFSQMLKQYNRSVKPNAFTISCALMACARLAALRFGRQIHAFV 521

Query: 1548 LRNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEA 1727
            LR++Y+  +++++NCLIDMY+KSGD+ AAR VFDNM  +N VSWTS+MTGYG+HG G+EA
Sbjct: 522  LRDQYDCDVLYVANCLIDMYSKSGDMDAARLVFDNMKHRNTVSWTSLMTGYGMHGHGEEA 581

Query: 1728 LEIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDF 1865
            +++F  MRR G   DG+TF+VVLYACSHSGM+D+G+ YF++M K+F
Sbjct: 582  IKVFDEMRREGLVSDGITFLVVLYACSHSGMVDEGIKYFHDMCKEF 627



 Score =  134 bits (337), Expect = 1e-28
 Identities = 82/284 (28%), Positives = 153/284 (53%), Gaps = 7/284 (2%)
 Frame = +3

Query: 351  ALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHALAL--VSGYTDSN----VF 512
            AL++F +M+     P+  T   +   C  + +L+ G+  H  ++  V  +  S+    + 
Sbjct: 366  ALNVFRQMQVCGLRPNEVTLVSLLSGCASVGALLHGKETHCYSIKCVLNFDRSDPRDELL 425

Query: 513  VDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMV 692
            V NA + MY +C   +  + +F+ +  +   + ++W ++I  Y Q GE   AL +F +M+
Sbjct: 426  VVNAIIDMYTKCKDINVGRAIFNSIPPKDR-NVVTWTAMIGGYAQHGEANDALELFSQML 484

Query: 693  SRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDV-FVGNAIVDMYAKC 869
             + +  ++ +A ++   L ACA +   R G +IHA+ +R     DV +V N ++DMY+K 
Sbjct: 485  KQYNRSVKPNAFTISCALMACARLAALRFGRQIHAFVLRDQYDCDVLYVANCLIDMYSKS 544

Query: 870  GLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVI 1049
            G MD A+ VFD M+ ++ VSW +L+TGY   G  + A+++F+ MR+EG+  + +T+  V+
Sbjct: 545  GDMDAARLVFDNMKHRNTVSWTSLMTGYGMHGHGEEAIKVFDEMRREGLVSDGITFLVVL 604

Query: 1050 AAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGAL 1181
             A +  G+  E +  F +M    S+ N  + + +  G    G L
Sbjct: 605  YACSHSGMVDEGIKYFHDMCKEFSEKNENSALEIKPGNIFTGTL 648


>gb|EOY16969.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
            [Theobroma cacao]
          Length = 850

 Score =  647 bits (1668), Expect = 0.0
 Identities = 329/595 (55%), Positives = 421/595 (70%), Gaps = 5/595 (0%)
 Frame = +3

Query: 108  FSSSTA-----QQCYFLPEDEPIQHQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXX 272
            FS++T+     Q+C  L + + I  Q +I   S    T   +S +L+    S +      
Sbjct: 23   FSTTTSTAALLQKCKSLVQAKLIHQQLLIQGLSHHFAT-HLISAYLTHHASSHSISLLQR 81

Query: 273  XXXXXXXXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLV 452
                    F+WN+LI+ S+ L    + L LF  M  L   PD YT+P+V KACG L S  
Sbjct: 82   FTPSPSAVFFWNSLIRRSLHLGFSHDVLTLFRRMLSLGCSPDHYTFPFVLKACGQLPSFR 141

Query: 453  IGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSII 632
             G +VHA+   +G+ +SNVFV NA V MY RCG  D A+Q+FDEM +RG+ D +SWNSI+
Sbjct: 142  RGAAVHAVVCTTGF-ESNVFVCNALVGMYARCGGLDDARQVFDEMCDRGICDVVSWNSIV 200

Query: 633  SVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRR 812
            + Y+Q  + R A+ +F +M    +I    D VSLVNVLPACAS+     G ++H +A+R 
Sbjct: 201  AAYMQSRDARNAVELFRRMTCYWEI--HPDVVSLVNVLPACASLAASLHGKQLHGFALRV 258

Query: 813  GLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLF 992
            GL EDVFVGNA+VDMYAKCG+MD+A  VF+RM+VKDVVSWNA+VTGYSQIG+F+ AL LF
Sbjct: 259  GLFEDVFVGNALVDMYAKCGMMDDANKVFERMKVKDVVSWNAMVTGYSQIGRFEEALGLF 318

Query: 993  ERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAAC 1172
            E+MR+E + L+VVTWSAVIA YAQR  G EALDVFR+M + G +PN VTLVS+LS CA  
Sbjct: 319  EKMREEKVELDVVTWSAVIAGYAQRDHGNEALDVFRQMQLCGCKPNVVTLVSLLSACALI 378

Query: 1173 GALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDR 1352
             ALVQGKET CY IK  LN + NDPG+++MVINGLIDMYAKC++   A +MFD +   +R
Sbjct: 379  EALVQGKETHCYAIKCVLNYDWNDPGEDLMVINGLIDMYAKCKSTNVAHSMFDIVAPSNR 438

Query: 1353 SVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGRE 1532
            +VVTWTVMIGGYAQHGEA+DAL LFSEM  +     PN FTI CAL+ACA + ALR G +
Sbjct: 439  NVVTWTVMIGGYAQHGEANDALKLFSEMFQEDKSAKPNTFTICCALMACAHLAALRFGTQ 498

Query: 1533 IHGYALRNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHG 1712
            IH Y LRN+YE  ++F+ NCLIDMY KSGD+ AAR VFDNM  +N VSWTS++TGYG+HG
Sbjct: 499  IHAYILRNQYESVLLFMENCLIDMYVKSGDIHAARVVFDNMQQRNSVSWTSLLTGYGMHG 558

Query: 1713 RGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
             G EA+++F  MR  G   DG+TF+VVLYACSHSGM+DQG+ +FNNM  +FG++P
Sbjct: 559  YGKEAIKVFDEMRAEGLVPDGITFLVVLYACSHSGMVDQGIRFFNNMHSEFGVIP 613


>gb|EOY16968.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
            [Theobroma cacao]
          Length = 862

 Score =  647 bits (1668), Expect = 0.0
 Identities = 329/595 (55%), Positives = 421/595 (70%), Gaps = 5/595 (0%)
 Frame = +3

Query: 108  FSSSTA-----QQCYFLPEDEPIQHQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXX 272
            FS++T+     Q+C  L + + I  Q +I   S    T   +S +L+    S +      
Sbjct: 35   FSTTTSTAALLQKCKSLVQAKLIHQQLLIQGLSHHFAT-HLISAYLTHHASSHSISLLQR 93

Query: 273  XXXXXXXXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLV 452
                    F+WN+LI+ S+ L    + L LF  M  L   PD YT+P+V KACG L S  
Sbjct: 94   FTPSPSAVFFWNSLIRRSLHLGFSHDVLTLFRRMLSLGCSPDHYTFPFVLKACGQLPSFR 153

Query: 453  IGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSII 632
             G +VHA+   +G+ +SNVFV NA V MY RCG  D A+Q+FDEM +RG+ D +SWNSI+
Sbjct: 154  RGAAVHAVVCTTGF-ESNVFVCNALVGMYARCGGLDDARQVFDEMCDRGICDVVSWNSIV 212

Query: 633  SVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRR 812
            + Y+Q  + R A+ +F +M    +I    D VSLVNVLPACAS+     G ++H +A+R 
Sbjct: 213  AAYMQSRDARNAVELFRRMTCYWEI--HPDVVSLVNVLPACASLAASLHGKQLHGFALRV 270

Query: 813  GLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLF 992
            GL EDVFVGNA+VDMYAKCG+MD+A  VF+RM+VKDVVSWNA+VTGYSQIG+F+ AL LF
Sbjct: 271  GLFEDVFVGNALVDMYAKCGMMDDANKVFERMKVKDVVSWNAMVTGYSQIGRFEEALGLF 330

Query: 993  ERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAAC 1172
            E+MR+E + L+VVTWSAVIA YAQR  G EALDVFR+M + G +PN VTLVS+LS CA  
Sbjct: 331  EKMREEKVELDVVTWSAVIAGYAQRDHGNEALDVFRQMQLCGCKPNVVTLVSLLSACALI 390

Query: 1173 GALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDR 1352
             ALVQGKET CY IK  LN + NDPG+++MVINGLIDMYAKC++   A +MFD +   +R
Sbjct: 391  EALVQGKETHCYAIKCVLNYDWNDPGEDLMVINGLIDMYAKCKSTNVAHSMFDIVAPSNR 450

Query: 1353 SVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGRE 1532
            +VVTWTVMIGGYAQHGEA+DAL LFSEM  +     PN FTI CAL+ACA + ALR G +
Sbjct: 451  NVVTWTVMIGGYAQHGEANDALKLFSEMFQEDKSAKPNTFTICCALMACAHLAALRFGTQ 510

Query: 1533 IHGYALRNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHG 1712
            IH Y LRN+YE  ++F+ NCLIDMY KSGD+ AAR VFDNM  +N VSWTS++TGYG+HG
Sbjct: 511  IHAYILRNQYESVLLFMENCLIDMYVKSGDIHAARVVFDNMQQRNSVSWTSLLTGYGMHG 570

Query: 1713 RGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
             G EA+++F  MR  G   DG+TF+VVLYACSHSGM+DQG+ +FNNM  +FG++P
Sbjct: 571  YGKEAIKVFDEMRAEGLVPDGITFLVVLYACSHSGMVDQGIRFFNNMHSEFGVIP 625


>ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Citrus sinensis]
          Length = 860

 Score =  646 bits (1667), Expect = 0.0
 Identities = 325/587 (55%), Positives = 419/587 (71%)
 Frame = +3

Query: 111  SSSTAQQCYFLPEDEPIQHQHVIPFDSDPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXX 290
            +S   +QC  L +   I HQ +I  +         ++ ++S +  S A            
Sbjct: 40   TSLLLRQCKSLTQVYLI-HQQIIVQNLTHVPPSHLIAAYVSHNAPSPALSLLQRISPSPF 98

Query: 291  XXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVH 470
              F+WN LI+ +V L+   NA  LF +M R  W PD YT+P+V KACG+L S   G SVH
Sbjct: 99   SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158

Query: 471  ALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQI 650
            A+   SG+ DSNVFV NA +AMY RC     A+QLFDEM + G+ D +SWN+I++ Y Q 
Sbjct: 159  AVICSSGF-DSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQS 217

Query: 651  GEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDV 830
            G+    L +F +M   GD+ ++ D VSLVN L ACAS+  W  G ++H +A+R  L+EDV
Sbjct: 218  GDAEGGLMLFARMT--GDVKVQGDGVSLVNALSACASLGTWSRGKQVHGHALRTMLIEDV 275

Query: 831  FVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKE 1010
            FVGNA+VDMYAKCG+M+EAK VF+RM+VKDVVSWNA+VTGYS+IG F+ A  LF++MR+E
Sbjct: 276  FVGNALVDMYAKCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQE 335

Query: 1011 GIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQG 1190
             + LNVVTWSAVIA YAQRG G+EALDVFR+M   G +PN VTLVS+LSGCA+ GAL+ G
Sbjct: 336  NVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLG 395

Query: 1191 KETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWT 1370
            KET CY IKR L+ +GN P D++MVIN LIDMYAKC++   AR MFD+I  K R V TWT
Sbjct: 396  KETHCYTIKRVLSADGNHP-DDLMVINALIDMYAKCKSVNVARVMFDAIAPKKRDVATWT 454

Query: 1371 VMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYAL 1550
            VMIGGY+QHGEA+DAL LF +M      + PN FT+SCAL+ACAR+ ALR GR+IH Y L
Sbjct: 455  VMIGGYSQHGEANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVL 514

Query: 1551 RNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEAL 1730
            RN+YE  + F++NCLIDMY++SGD+  AR VFDN+  +N VSWTS+MTGYG+HG GD+A 
Sbjct: 515  RNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAH 574

Query: 1731 EIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGI 1871
              F  MR+ G   DGVTF+V+LYACSHSGM+DQG+ YF++M+K+FGI
Sbjct: 575  WAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGI 621


>ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g16860 gi|9755687|emb|CAC01699.1| putative protein
            [Arabidopsis thaliana] gi|332004967|gb|AED92350.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 850

 Score =  636 bits (1641), Expect = e-180
 Identities = 320/572 (55%), Positives = 408/572 (71%), Gaps = 1/572 (0%)
 Frame = +3

Query: 165  HQHVIPFDS-DPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXXXXFYWNNLIKWSVSLQD 341
            HQ ++ F     N T   +S ++S    S A              ++WN+LI+       
Sbjct: 48   HQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGC 107

Query: 342  QRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDN 521
                L+LF  M  L W PD YT+P+VFKACG++SS+  GES HAL+LV+G+  SNVFV N
Sbjct: 108  ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI-SNVFVGN 166

Query: 522  AAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRG 701
            A VAMY RC +   A+++FDEM    ++D +SWNSII  Y ++G+ + AL MF +M +  
Sbjct: 167  ALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN-- 221

Query: 702  DIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMD 881
            +   R D ++LVNVLP CAS+     G ++H +A+   +++++FVGN +VDMYAKCG+MD
Sbjct: 222  EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281

Query: 882  EAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYA 1061
            EA  VF  M VKDVVSWNA+V GYSQIG+F+ A+RLFE+M++E I ++VVTWSA I+ YA
Sbjct: 282  EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341

Query: 1062 QRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGN 1241
            QRGLGYEAL V R+M+ SG +PN VTL+SVLSGCA+ GAL+ GKE  CY IK  ++L  N
Sbjct: 342  QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401

Query: 1242 DPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALG 1421
              GDE MVIN LIDMYAKC+   TARAMFDS+  K+R VVTWTVMIGGY+QHG+A+ AL 
Sbjct: 402  GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461

Query: 1422 LFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLID 1601
            L SEM  + C+  PN FTISCALVACA + ALR+G++IH YALRN+     +F+SNCLID
Sbjct: 462  LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521

Query: 1602 MYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVT 1781
            MYAK G +  AR VFDNM+ KNEV+WTS+MTGYG+HG G+EAL IF  MRR GF +DGVT
Sbjct: 522  MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581

Query: 1782 FVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
             +VVLYACSHSGMIDQGM YFN M   FG+ P
Sbjct: 582  LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613


>gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis]
          Length = 858

 Score =  635 bits (1638), Expect = e-179
 Identities = 314/551 (56%), Positives = 396/551 (71%)
 Frame = +3

Query: 225  FLSSDRHSDAXXXXXXXXXXXXXXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGY 404
            +++ + H+ A              F+WN  I+ +V        L L+  M RL W PD Y
Sbjct: 74   YMACNAHTHAVVLLEPLEPSPFSVFWWNQFIRRAVGSGLLNEVLGLYQRMHRLGWRPDEY 133

Query: 405  TYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDE 584
            T+P+V KACG+LSS  +G SVHA    +G+ + NVFV NA V MYGRCGA D A+++F+E
Sbjct: 134  TFPFVLKACGELSSFRLGASVHAAVCANGF-EGNVFVCNAVVTMYGRCGARDDARKMFEE 192

Query: 585  MLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASV 764
            +L+RG+ D +SWNSI++ Y Q G+   ALRMF +M+   D  +R DA  LVNV  AC S+
Sbjct: 193  VLKRGIGDVVSWNSIVAAYSQNGDSGNALRMFGRMMK--DRSVRPDAFGLVNVFSACGSI 250

Query: 765  KYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALV 944
                 G ++H +A+R  L EDVFVGNAIVDMYAKC +MDEAK  F++M+VKDVVSWNA+V
Sbjct: 251  GVLMWGKQVHGFAVRSCLHEDVFVGNAIVDMYAKCEMMDEAKKGFEQMKVKDVVSWNAMV 310

Query: 945  TGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQ 1124
            TGYSQ G+F+ A+RLFE+MR E I +NVVTW+AVIA  AQRGLGYE+L++FR+M  SG  
Sbjct: 311  TGYSQAGRFEDAIRLFEKMRTEKIEMNVVTWTAVIAGLAQRGLGYESLNMFRKMQASGVD 370

Query: 1125 PNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQN 1304
             N  TLVS+LSGCA+ GAL+QGKE  CY IKR LNL+G D  +++++INGLI+MYAKC++
Sbjct: 371  LNVATLVSLLSGCASAGALLQGKEIHCYAIKRVLNLDGKDAEEDILIINGLINMYAKCKH 430

Query: 1305 FTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISC 1484
               AR MFD  E K R VVTWT MIGGYAQHGEA+DAL LFS+ML       PN FTISC
Sbjct: 431  LKVARMMFDLKEPKGRHVVTWTAMIGGYAQHGEANDALALFSQMLGRDNYKKPNAFTISC 490

Query: 1485 ALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMK 1664
            AL+ACA +GALRLG +IH   +RN+Y+    F+SNCLIDMY KSGDV  A+AVFD M  +
Sbjct: 491  ALMACAHLGALRLGNQIHACVIRNQYDSMTPFVSNCLIDMYCKSGDVDIAQAVFDKMQQR 550

Query: 1665 NEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYF 1844
            N VSWTS++ GYG+HGRG EAL +F  M R G   D VTFVV+LYACSHSGMID+GM YF
Sbjct: 551  NFVSWTSLIAGYGMHGRGKEALRVFDEMNRVGLAADSVTFVVLLYACSHSGMIDEGMKYF 610

Query: 1845 NNMTKDFGIVP 1877
            N M+K +G+ P
Sbjct: 611  NGMSKGYGVTP 621


>ref|XP_006287060.1| hypothetical protein CARUB_v10000209mg [Capsella rubella]
            gi|482555766|gb|EOA19958.1| hypothetical protein
            CARUB_v10000209mg [Capsella rubella]
          Length = 850

 Score =  630 bits (1625), Expect = e-178
 Identities = 312/560 (55%), Positives = 400/560 (71%)
 Frame = +3

Query: 198  NTTGSALSNFLSSDRHSDAXXXXXXXXXXXXXXFYWNNLIKWSVSLQDQRNALHLFDEMR 377
            N T   +S ++S    S A              ++WN+LI++          + LF  M 
Sbjct: 60   NITSHLISTYISLGCSSSAVSLLCRFPPSDSGVYHWNSLIRFHGENGRASECISLFRLMH 119

Query: 378  RLDWIPDGYTYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAY 557
             L W PD YT+P+VFKACG++SS++ G S H L+LV+G+  SNVFV NA VAMY RCG+ 
Sbjct: 120  SLSWTPDNYTFPFVFKACGEISSVICGVSAHGLSLVTGFM-SNVFVGNALVAMYYRCGSL 178

Query: 558  DKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLV 737
              A+++FDEM    ++D +SWNSII  Y ++G+ + AL +F KM +  +   R D ++ V
Sbjct: 179  GDARKVFDEM---SVWDVVSWNSIIESYAKLGKPKVALELFSKMTN--EFGFRPDHITFV 233

Query: 738  NVLPACASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVK 917
            NVLP CAS+     G ++H +A    +++++FVGN +VDMYAKCG+MDEA  VF  M VK
Sbjct: 234  NVLPPCASIGAHSLGKQLHGFATTSEIIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293

Query: 918  DVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVF 1097
            DVVSWNA+V G+SQIG+FD A+RLFE+M++E I ++VVTWSA I+ YAQRGLGYEAL V 
Sbjct: 294  DVVSWNAMVAGFSQIGRFDDAVRLFEKMQEEKINMDVVTWSAAISGYAQRGLGYEALGVC 353

Query: 1098 REMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGL 1277
            R+M+ SG +PN VTL+SVLSGCA+ GAL+ GKE  CY IK  ++L  N  GD+ MVIN L
Sbjct: 354  RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDDNMVINQL 413

Query: 1278 IDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRM 1457
            +DMYAKC+    ARAMFDS+  KDR VV+WTVMIGGY+QHG+A+ AL LFS+M     + 
Sbjct: 414  MDMYAKCKKVDVARAMFDSLPPKDRDVVSWTVMIGGYSQHGDANKALKLFSKMFEQDYQT 473

Query: 1458 MPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMYAKSGDVVAAR 1637
             PN FTISCALVACA + ALR+G++IH YALRN+     +F+SNCLIDMYAK GD+  AR
Sbjct: 474  RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDAR 533

Query: 1638 AVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSG 1817
             VFDNM+ +NEVSWTS+MTGYG+HG G EAL IF  MRR GF +DGVT +VVLYACSHSG
Sbjct: 534  LVFDNMMDRNEVSWTSLMTGYGMHGYGKEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593

Query: 1818 MIDQGMNYFNNMTKDFGIVP 1877
            MIDQGM YFN M  DFG+ P
Sbjct: 594  MIDQGMEYFNRMKTDFGVCP 613


>ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317576|gb|EFH47998.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 850

 Score =  628 bits (1620), Expect = e-177
 Identities = 319/572 (55%), Positives = 405/572 (70%), Gaps = 1/572 (0%)
 Frame = +3

Query: 165  HQHVIPFDS-DPNTTGSALSNFLSSDRHSDAXXXXXXXXXXXXXXFYWNNLIKWSVSLQD 341
            HQ ++ F     N T   +S ++S    S A              ++WN+LI+   +   
Sbjct: 48   HQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGR 107

Query: 342  QRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDN 521
                L  F  M  L W PD YT+P+VFKACG++SS+  G+S HAL+ V+G+  SNVFV N
Sbjct: 108  ANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFM-SNVFVGN 166

Query: 522  AAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRG 701
            A VAMY RCG+   A+++FDEM    ++D +SWNSII  Y ++G+ + AL MF KM +  
Sbjct: 167  ALVAMYSRCGSLSDARKVFDEM---PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTN-- 221

Query: 702  DIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMD 881
            +   R D ++LVNVLP CASV     G + H +A+   +++++FVGN +VDMYAK G+MD
Sbjct: 222  EFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMD 281

Query: 882  EAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYA 1061
            EA  VF  M VKDVVSWNA+V GYSQIG+F+ A+RLFE+M++E I ++VVTWSA I+ YA
Sbjct: 282  EANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYA 341

Query: 1062 QRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGN 1241
            QRGLGYEAL V R+M+ SG +PN VTL+SVLSGCA+ GAL+ GKE  CY IK  ++L  N
Sbjct: 342  QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKN 401

Query: 1242 DPGDEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALG 1421
              GDE MVIN LIDMYAKC+    ARAMFDS+  K+R VVTWTVMIGGY+QHG+A+ AL 
Sbjct: 402  GHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461

Query: 1422 LFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLID 1601
            L SEM  + C+  PN FTISCALVACA + AL +G++IH YALRN+     +F+SNCLID
Sbjct: 462  LLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLID 521

Query: 1602 MYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVT 1781
            MYAK GD+  AR VFDNM+ KNEV+WTS+MTGYG+HG G+EAL IF  MRR GF +DGVT
Sbjct: 522  MYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVT 581

Query: 1782 FVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
             +VVLYACSHSGMIDQGM YFN M  DFG+ P
Sbjct: 582  LLVVLYACSHSGMIDQGMEYFNRMKTDFGVSP 613


>gb|ESW13450.1| hypothetical protein PHAVU_008G197200g [Phaseolus vulgaris]
          Length = 863

 Score =  626 bits (1614), Expect = e-176
 Identities = 309/528 (58%), Positives = 391/528 (74%), Gaps = 1/528 (0%)
 Frame = +3

Query: 297  FYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLSSLVIGESVHAL 476
            F+WN LI+ ++ L   R    LF  M+ L W PD YTYP++FK C  LS   +G S+HA 
Sbjct: 107  FWWNQLIRRALHLGTPRKVFALFRRMKSLGWTPDHYTYPFLFKGCSFLS---LGASLHAT 163

Query: 477  ALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGE 656
               SG+  SNVFV NA V+MYG+CGA   A Q+FD++ + G+ D +SWNSI+S Y+   +
Sbjct: 164  VARSGFA-SNVFVCNALVSMYGKCGALSHAHQVFDDLCQWGIQDLVSWNSIVSAYMGASD 222

Query: 657  YRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFV 836
             + +L +F KM      ++  D +SLVN+LPACAS+     G E+H +AIR GL++DVFV
Sbjct: 223  AKTSLLLFRKMTRLN--LMSPDVISLVNILPACASLAALLHGREVHGFAIRSGLVDDVFV 280

Query: 837  GNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGI 1016
            GNA+VDMYAKCG ++EA  VF RM  KDVVSWNA+VTGYSQ G+ + AL LFERMR+E I
Sbjct: 281  GNAVVDMYAKCGEVEEANKVFQRMVFKDVVSWNAMVTGYSQAGRLEHALSLFERMREEDI 340

Query: 1017 GLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKE 1196
             L+VVTW+AVI  YAQRG G EALDVFR+M   GS+PN VTLVS+LS CA+ GAL+ GKE
Sbjct: 341  ELDVVTWTAVITGYAQRGQGCEALDVFRQMCSCGSRPNVVTLVSLLSACASVGALLHGKE 400

Query: 1197 TQCYVIKRFLNLEGNDPG-DEMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTV 1373
            T CY IK  L+L+G DPG D++ VINGLIDMYAKCQ+   AR MFDS+  KDR VVTWTV
Sbjct: 401  THCYAIKSILSLDGPDPGDDDLKVINGLIDMYAKCQSTEVARKMFDSVSSKDRDVVTWTV 460

Query: 1374 MIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALR 1553
            MIGGYAQHG+A+ AL LFSEM     +  PN FT+SCALVACAR+ ALR GR+IH Y LR
Sbjct: 461  MIGGYAQHGDANHALQLFSEMFYKYIK--PNDFTLSCALVACARLSALRFGRQIHAYVLR 518

Query: 1554 NRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALE 1733
            N Y   ++F++NCLIDMY+K GDV  A+ VFDNM  +N VSWTS+MTGYG+HGRG++A++
Sbjct: 519  NCYGSVVLFVANCLIDMYSKCGDVDTAQIVFDNMPHRNAVSWTSLMTGYGMHGRGEDAVQ 578

Query: 1734 IFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            +F  MR+     DG+TF+V+LYACSHSGM+DQG ++FN M K+FG+ P
Sbjct: 579  VFDEMRKVSLVPDGITFLVLLYACSHSGMVDQGTDFFNRMRKEFGVDP 626



 Score =  127 bits (319), Expect = 2e-26
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
 Frame = +3

Query: 939  LVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSG 1118
            L+  Y        A+ L ER+       +V  W+ +I      G   +   +FR M   G
Sbjct: 79   LIGAYMACNSTATAILLLERLPPSPS--SVFWWNQLIRRALHLGTPRKVFALFRRMKSLG 136

Query: 1119 SQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKC 1298
              P+  T   +  GC+    L  G      V +       +     + V N L+ MY KC
Sbjct: 137  WTPDHYTYPFLFKGCS---FLSLGASLHATVAR-------SGFASNVFVCNALVSMYGKC 186

Query: 1299 QNFTTARAMFDSI-ERKDRSVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGFT 1475
               + A  +FD + +   + +V+W  ++  Y    +A  +L LF +M      M P+  +
Sbjct: 187  GALSHAHQVFDDLCQWGIQDLVSWNSIVSAYMGASDAKTSLLLFRKMTRLNL-MSPDVIS 245

Query: 1476 ISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNM 1655
            +   L ACA + AL  GRE+HG+A+R+   +  +F+ N ++DMYAK G+V  A  VF  M
Sbjct: 246  LVNILPACASLAALLHGREVHGFAIRSGLVDD-VFVGNAVVDMYAKCGEVEEANKVFQRM 304

Query: 1656 IMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQGM 1835
            + K+ VSW +++TGY   GR + AL +F  MR     +D VT+  V+   +  G   + +
Sbjct: 305  VFKDVVSWNAMVTGYSQAGRLEHALSLFERMREEDIELDVVTWTAVITGYAQRGQGCEAL 364

Query: 1836 NYFNNM 1853
            + F  M
Sbjct: 365  DVFRQM 370


>gb|EMJ05817.1| hypothetical protein PRUPE_ppa002349mg [Prunus persica]
          Length = 683

 Score =  620 bits (1600), Expect = e-175
 Identities = 298/448 (66%), Positives = 364/448 (81%)
 Frame = +3

Query: 534  MYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRGDIML 713
            MYGRCGA + A+++FDE+LERG+ D +SWNSI+S YVQ G+ + AL MF++M+  GD  +
Sbjct: 1    MYGRCGALNDARKMFDELLERGIGDVVSWNSIVSAYVQSGDSKNALSMFDRMM--GDFSV 58

Query: 714  RADAVSLVNVLPACASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMDEAKN 893
            R DA SLVNVLPACAS      G +IH+YAIRRGL EDVFVGNA+VDMYAKC +MDEA  
Sbjct: 59   RPDAFSLVNVLPACASAGAPMWGKQIHSYAIRRGLFEDVFVGNAVVDMYAKCEMMDEANK 118

Query: 894  VFDRMEVKDVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGL 1073
            VF+RME KDVVSWNA+VTGYSQIG+ D A+  FE+MR+E I LNVVTWSAVIA YAQRG 
Sbjct: 119  VFERMEEKDVVSWNAMVTGYSQIGRLDDAIGFFEKMREEKIELNVVTWSAVIAGYAQRGH 178

Query: 1074 GYEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGD 1253
            GY ALDVFR+M   GS+PNAVTL+S+LSGCA+ GAL+ GKET CY IK  LNL+ NDPG+
Sbjct: 179  GYGALDVFRQMQACGSEPNAVTLISLLSGCASAGALIHGKETHCYAIKWILNLDRNDPGN 238

Query: 1254 EMMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLFSE 1433
            ++MVINGLIDMY KC++   AR MFDS+  K R+VVTWTVMIGGYAQHGEA++AL LF +
Sbjct: 239  DIMVINGLIDMYTKCKSPKVARMMFDSVAPKKRNVVTWTVMIGGYAQHGEANEALELFYQ 298

Query: 1434 MLSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMYAK 1613
            ML     + PN FTISCAL+ACAR+GALR G++IH + LRN+Y+   +F++NCL+DMY+K
Sbjct: 299  MLRQDFPLKPNAFTISCALMACARLGALRFGKQIHAFVLRNQYDFVKLFVANCLVDMYSK 358

Query: 1614 SGDVVAARAVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVTFVVV 1793
            SGD+ AAR VFD M  +N VSWTS+MTGYG+HGRG+EAL++F  MR  G   DGVTFVVV
Sbjct: 359  SGDIDAARVVFDYMQQRNAVSWTSLMTGYGMHGRGEEALQVFDEMRSVGLVPDGVTFVVV 418

Query: 1794 LYACSHSGMIDQGMNYFNNMTKDFGIVP 1877
            LYACSHSGM+D+GM YFN+M+ DFG+VP
Sbjct: 419  LYACSHSGMVDEGMRYFNSMSTDFGVVP 446



 Score =  195 bits (495), Expect = 7e-47
 Identities = 145/513 (28%), Positives = 237/513 (46%), Gaps = 43/513 (8%)
 Frame = +3

Query: 303  WNNLIKWSVSLQDQRNALHLFDEMRR-LDWIPDGYTYPYVFKACGDLSSLVIGESVHALA 479
            WN+++   V   D +NAL +FD M       PD ++   V  AC    + + G+ +H+ A
Sbjct: 29   WNSIVSAYVQSGDSKNALSMFDRMMGDFSVRPDAFSLVNVLPACASAGAPMWGKQIHSYA 88

Query: 480  LVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYVQIGEY 659
            +  G  + +VFV NA V MY +C   D+A ++F+ M E+   D +SWN++++ Y QIG  
Sbjct: 89   IRRGLFE-DVFVGNAVVDMYAKCEMMDEANKVFERMEEK---DVVSWNAMVTGYSQIGRL 144

Query: 660  RKALRMFEKM-------------------VSRG------DIMLR-------ADAVSLVNV 743
              A+  FEKM                     RG      D+  +        +AV+L+++
Sbjct: 145  DDAIGFFEKMREEKIELNVVTWSAVIAGYAQRGHGYGALDVFRQMQACGSEPNAVTLISL 204

Query: 744  LPACASVKYWRTGIEIHAYAI-------RRGLLEDVFVGNAIVDMYAKCGLMDEAKNVFD 902
            L  CAS      G E H YAI       R     D+ V N ++DMY KC     A+ +FD
Sbjct: 205  LSGCASAGALIHGKETHCYAIKWILNLDRNDPGNDIMVINGLIDMYTKCKSPKVARMMFD 264

Query: 903  RMEVK--DVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLG 1076
             +  K  +VV+W  ++ GY+Q G+ + AL LF +M ++   L                  
Sbjct: 265  SVAPKKRNVVTWTVMIGGYAQHGEANEALELFYQMLRQDFPL------------------ 306

Query: 1077 YEALDVFREMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGDE 1256
                           +PNA T+   L  CA  GAL  GK+   +V++   +        +
Sbjct: 307  ---------------KPNAFTISCALMACARLGALRFGKQIHAFVLRNQYDFV------K 345

Query: 1257 MMVINGLIDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLFSEM 1436
            + V N L+DMY+K  +   AR +FD +++  R+ V+WT ++ GY  HG   +AL +F EM
Sbjct: 346  LFVANCLVDMYSKSGDIDAARVVFDYMQQ--RNAVSWTSLMTGYGMHGRGEEALQVFDEM 403

Query: 1437 LSDKCRMMPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMYAKS 1616
             S    ++P+G T    L AC+  G +  G         +           C++D+  ++
Sbjct: 404  RS--VGLVPDGVTFVVVLYACSHSGMVDEGMRYFNSMSTDFGVVPGAEHYACMVDILGRA 461

Query: 1617 GDVVAARAVFDNMIMK-NEVSWTSIMTGYGLHG 1712
            G + AA A+   M M+   ++W ++++    HG
Sbjct: 462  GRLDAALALIKGMPMQPTPITWVALLSACRTHG 494



 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
 Frame = +3

Query: 309 NLIKWSVSLQ------DQRNALHLFDEMRRLDWI--PDGYTYPYVFKACGDLSSLVIGES 464
           N++ W+V +       +   AL LF +M R D+   P+ +T      AC  L +L  G+ 
Sbjct: 272 NVVTWTVMIGGYAQHGEANEALELFYQMLRQDFPLKPNAFTISCALMACARLGALRFGKQ 331

Query: 465 VHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWNSIISVYV 644
           +HA  L + Y    +FV N  V MY + G  D A+ +FD M +R   + +SW S+++ Y 
Sbjct: 332 IHAFVLRNQYDFVKLFVANCLVDMYSKSGDIDAARVVFDYMQQR---NAVSWTSLMTGYG 388

Query: 645 QIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIE-IHAYAIRRGLL 821
             G   +AL++F++M S G   L  D V+ V VL AC+       G+   ++ +   G++
Sbjct: 389 MHGRGEEALQVFDEMRSVG---LVPDGVTFVVVLYACSHSGMVDEGMRYFNSMSTDFGVV 445

Query: 822 EDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDV-VSWNALVTGYSQIGKFDV 977
                   +VD+  + G +D A  +   M ++   ++W AL++     G  ++
Sbjct: 446 PGAEHYACMVDILGRAGRLDAALALIKGMPMQPTPITWVALLSACRTHGNVEL 498


>ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Cicer arietinum]
          Length = 855

 Score =  620 bits (1599), Expect = e-175
 Identities = 308/556 (55%), Positives = 402/556 (72%), Gaps = 2/556 (0%)
 Frame = +3

Query: 216  LSNFLSSDRHSDAXXXXXXXXXXXXXXFYWNNLIKWSVSLQDQRNALHLFDEMRRLDWIP 395
            +S+++S++   +A              F+WN LI+ S+        LHL+  M+ L W P
Sbjct: 67   ISSYISTNSIPNALSLLQTLHPSPSSVFWWNQLIRQSLHFNSPHVVLHLYCRMKTLHWSP 126

Query: 396  DGYTYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQL 575
            D YT+P+VFKACGD+ S  +G S+HA    SG+ D+NVFV NA V+MYG+C A   A+++
Sbjct: 127  DHYTFPFVFKACGDVLSFNLGASIHASVFRSGF-DNNVFVCNAVVSMYGKCNAIVHARKV 185

Query: 576  FDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKM-VSRGDIMLRADAVSLVNVLPA 752
            FDEM +RG+ D +SWNSI+S Y +      A+ +F +M V  G   +R DAVS+VNVLP 
Sbjct: 186  FDEMCQRGVCDLVSWNSIVSAYSRCCVQEIAVSLFREMTVGCG---MRPDAVSVVNVLPV 242

Query: 753  CASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSW 932
            C  ++    G ++H + IR GL++DVFVGNA+VDMYAKCG M++A  VF+RM  KDVVSW
Sbjct: 243  CGYLRLGFHGKQVHGFGIRTGLVDDVFVGNALVDMYAKCGKMEDASKVFERMGFKDVVSW 302

Query: 933  NALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIV 1112
            NA+VTGYSQ G+F+ A+ LF +MR+E I L+VVTWS+V+A YAQRG G EA+DVFR+M  
Sbjct: 303  NAMVTGYSQNGRFEDAVSLFGKMREEKIELDVVTWSSVVAGYAQRGYGCEAMDVFRQMCD 362

Query: 1113 SGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYA 1292
             G +PN VTL+S+LS CA+ GAL+ G+ET CY IK  LN+  +D  D++ VINGLIDMYA
Sbjct: 363  CGCRPNVVTLLSLLSACASVGALLHGRETHCYAIKFILNINDDDYDDDLTVINGLIDMYA 422

Query: 1293 KCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRMMPNGF 1472
            KCQ+   ARAMFDSI  K R VVTWTVMIGGYAQHG+A+ AL LFSEM      ++PN F
Sbjct: 423  KCQSLEVARAMFDSISPKHRDVVTWTVMIGGYAQHGDANHALQLFSEMFKTDNCIIPNDF 482

Query: 1473 TISCALVACARIGALRLGREIHGYAL-RNRYEEAMIFISNCLIDMYAKSGDVVAARAVFD 1649
            T+SCAL+ACAR+ ALR GR+IHGY L R+R    ++F++NCLIDMY+KSGD+  A+ VFD
Sbjct: 483  TLSCALMACARLAALRFGRQIHGYMLRRSRINSDVLFVANCLIDMYSKSGDIDTAQVVFD 542

Query: 1650 NMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSGMIDQ 1829
             M  +N VSWTS++TGYGLHGRGD+AL +F  MR  G   DG+TF+VVLYACSHSGM D+
Sbjct: 543  YMSNRNAVSWTSLLTGYGLHGRGDDALRVFNEMREVGLVPDGITFLVVLYACSHSGMTDR 602

Query: 1830 GMNYFNNMTKDFGIVP 1877
            G+N F  M+KDFG+ P
Sbjct: 603  GINLFYRMSKDFGVDP 618


>ref|XP_006400228.1| hypothetical protein EUTSA_v10012670mg [Eutrema salsugineum]
            gi|557101318|gb|ESQ41681.1| hypothetical protein
            EUTSA_v10012670mg [Eutrema salsugineum]
          Length = 853

 Score =  611 bits (1575), Expect = e-172
 Identities = 307/560 (54%), Positives = 392/560 (70%)
 Frame = +3

Query: 198  NTTGSALSNFLSSDRHSDAXXXXXXXXXXXXXXFYWNNLIKWSVSLQDQRNALHLFDEMR 377
            N T   +S ++S    S A              ++WN+LI+          +L LF  M 
Sbjct: 60   NRTSHLISTYISLGCSSAAVSLLHRFPPSEAGVYHWNSLIRVYCDNDRVSESLSLFRLMH 119

Query: 378  RLDWIPDGYTYPYVFKACGDLSSLVIGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAY 557
             L W PD YT+P+VFKACGD+SS   G S HAL+  +G+ +SNVFV NA VAMY R G+ 
Sbjct: 120  SLSWTPDNYTFPFVFKACGDISSFRCGVSAHALSQFTGF-NSNVFVGNALVAMYSRFGSL 178

Query: 558  DKAQQLFDEMLERGLFDTISWNSIISVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLV 737
              A+++FDEM   G++D +SWNSII  Y ++G+ + AL MF +M +    M   D ++ V
Sbjct: 179  ADARKVFDEMSVIGVWDVVSWNSIIESYAKLGKPKMALEMFSRMTNEFGFM--PDDITFV 236

Query: 738  NVLPACASVKYWRTGIEIHAYAIRRGLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVK 917
            NV+P CAS+     G ++H + I   ++ ++FVGN +VDMYAKCG+MDEA  VF  M  K
Sbjct: 237  NVIPPCASIGAHSFGKQMHGFVITSEIIRNMFVGNCLVDMYAKCGMMDEANRVFSNMTSK 296

Query: 918  DVVSWNALVTGYSQIGKFDVALRLFERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVF 1097
            DVVSWNA+V GYSQIG+FD A++LFE+M++E I ++VVTWSA I+ YAQRGLGYEAL V 
Sbjct: 297  DVVSWNAMVAGYSQIGRFDDAVKLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALRVC 356

Query: 1098 REMIVSGSQPNAVTLVSVLSGCAACGALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGL 1277
            R+M+ S  +PN VTL+SVLSGCA+ GAL+ GKE  CY IK  ++L  N  GD+ MVIN L
Sbjct: 357  RQMLSSEIKPNEVTLISVLSGCASVGALLHGKEIHCYAIKHPIDLCKNVLGDDNMVINQL 416

Query: 1278 IDMYAKCQNFTTARAMFDSIERKDRSVVTWTVMIGGYAQHGEASDALGLFSEMLSDKCRM 1457
            IDMYAKC+   TARAMFDS+   +R VVTWTVMI GY+QHG+A++AL LFSEM     R 
Sbjct: 417  IDMYAKCKKVDTARAMFDSLSHMERDVVTWTVMISGYSQHGDANEALKLFSEMFEQDSRP 476

Query: 1458 MPNGFTISCALVACARIGALRLGREIHGYALRNRYEEAMIFISNCLIDMYAKSGDVVAAR 1637
             PN FTISCALVACA + ALR+G++IH YALRN+     +F+SNCLIDMYAK GD+   R
Sbjct: 477  RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAIPLFVSNCLIDMYAKCGDIGNGR 536

Query: 1638 AVFDNMIMKNEVSWTSIMTGYGLHGRGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSG 1817
             VFD+M  +NEV+WTS+MTGYG+HG G+EAL IF  M + GF +DGVT +VVLYACSHSG
Sbjct: 537  LVFDSMKGRNEVTWTSLMTGYGMHGYGEEALGIFDEMWKLGFKLDGVTLLVVLYACSHSG 596

Query: 1818 MIDQGMNYFNNMTKDFGIVP 1877
            MIDQGM YFN M  DFG+ P
Sbjct: 597  MIDQGMKYFNRMKTDFGVSP 616


>ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355503507|gb|AES84710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  573 bits (1476), Expect = e-160
 Identities = 297/600 (49%), Positives = 407/600 (67%), Gaps = 11/600 (1%)
 Frame = +3

Query: 102  LCFSSSTA--QQCYFLPEDEPIQHQHVIP---FDSDPNTTGSALSNFLSSDRHSDAXXXX 266
            L + SST   QQC  L + + +  Q++I     +S  N T + +  ++SS+  ++A    
Sbjct: 22   LLYHSSTISKQQCKTLTQAKLLHQQYIINGHLLNSYTNVT-NLIYTYISSNSITNAILLL 80

Query: 267  XXXXXXXXXXFYW-NNLIKWSVSLQDQRNALHLFDEMRRLDWIPDGYTYPYVFKACGDLS 443
                       YW N LI+ ++       AL LF  M+ L W PD YT+P+VFKACG++S
Sbjct: 81   EKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEIS 140

Query: 444  SLVIGESVHALALVSGYTDSNVFVDNAAVAMYGRCGAYDKAQQLFDEMLERGLFDTISWN 623
            +  +G S+H   +  G+ +SNVFV NA ++MYG+C A   A+++FDE+  RG+ D+++WN
Sbjct: 141  NFELGASIHGCVIRLGF-ESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWN 199

Query: 624  SIISVYVQIGEYRKALRMFEKMVSRGDIMLRADAVSLVNVLPACASVKYWRTGIEIHAYA 803
            SI+SVY        A+ +F +M     I+   D V +VN+LP C  +     G ++H + 
Sbjct: 200  SIVSVYSHCFVPNVAVSLFREMTVGYGIL--PDTVGVVNILPVCGYLGLGLCGRQVHGFC 257

Query: 804  IRRGLLEDVFVGNAIVDMYAKCGLMDEAKNVFDRMEVKDVVSWNALVTGYSQIGKFDVAL 983
            +R GL+EDVFVGNA+VDMYAKCG M++A  VF+RM  KDVV+WNA+VTGYSQ G+F+ AL
Sbjct: 258  VRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDAL 317

Query: 984  RLFERMRKEGIGLNVVTWSAVIAAYAQRGLGYEALDVFREMIVSGSQPNAVTLVSVLSGC 1163
             LF +MR+E I  +VVTWS+VI+ YAQRG G EA+DVFR+M     +PN VTL+S+LS C
Sbjct: 318  SLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSAC 377

Query: 1164 AACGALVQGKETQCYVIKRFLNLEGNDPGDEMMVINGLIDMYAKCQNFTTARAMFDSIER 1343
            A+ GAL+ GKET CY +K  L  E ND  D++ VIN LIDMYAKC++   ARAMFD I  
Sbjct: 378  ASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICP 437

Query: 1344 KDRSVVTWTVMIGGYAQHGEASDALGLFSEMLS-DKCRMMPNGFTISCALVACARIGALR 1520
            KDR VVTWTVMIGGYAQHG+A+ AL LFSEM   D C ++PN FTISC L+ACAR+ AL+
Sbjct: 438  KDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNC-IVPNDFTISCVLMACARLAALK 496

Query: 1521 LGREIHGYAL-RNRYEEAMIFISNCLIDMYAKSGDVVAARAVFDNMIMKNEVSWTSIMTG 1697
             G++IH Y L R+R +  ++F++NCLIDMY+KSGDV  A+ VFD+M  +N VSWTS++TG
Sbjct: 497  FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTG 556

Query: 1698 YGLHGRGDEALEIFTGMRRAGFPIDGVTFVVVLYACSHSGM---IDQGMNYFNNMTKDFG 1868
            YG+HGR ++A  +F  MR+    +DG+TF+VVLYACSHSGM   +D G+ ++  M    G
Sbjct: 557  YGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVEHYACMVDLLG 616