BLASTX nr result
ID: Rehmannia22_contig00012603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00012603
(2775 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 640 0.0
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 640 0.0
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 630 0.0
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 624 0.0
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe... 602 0.0
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 593 0.0
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 590 0.0
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 592 0.0
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 585 0.0
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 583 0.0
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 578 0.0
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 584 0.0
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 575 0.0
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 577 0.0
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 575 0.0
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 557 0.0
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 557 0.0
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro... 563 0.0
gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus... 557 0.0
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 546 0.0
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 640 bits (1651), Expect(2) = 0.0
Identities = 303/420 (72%), Positives = 355/420 (84%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQSH ENQ++DLRSR RIF+PKGR+LVGCLDETGIL+YGQVYVR+TM KAE+Q
Sbjct: 693 EPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQ 752
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
G Q FF++VDE T+ NPCLHPGDVRVLEAV++V L+E VDC++FPQK
Sbjct: 753 -NGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQK 811
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGDLYFI WD++LIP +TVTPMDYTGRRPRIMDH+VTLEEIQ+FF
Sbjct: 812 GERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 871
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMISDTLG ISTAHL+HADREPDKAL+SKCL+LA LHSMAVDFAKTGA AEMPR LKPR
Sbjct: 872 DYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 931
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMERW+KPMY+S G LGKLYR ++ + ++ +D DAYD DL+V+GY++
Sbjct: 932 EFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEA 991
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
F +TA+THK YLD M +LLNYYGAE EVEILTGNL++KS YLQRDNRRY E+KDR+LVS
Sbjct: 992 FTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1051
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
K+L KEVKGWF S C E + QKLASAWY+VTYHP+Y + S NCLGFPWVVGDIL+++KS
Sbjct: 1052 AKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTYHPSYCHESANCLGFPWVVGDILLNMKS 1111
Score = 353 bits (906), Expect(2) = 0.0
Identities = 174/236 (73%), Positives = 201/236 (85%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+F FLAFSASQLRSNSVWMFASNE+VKAEDIREWMGCFNKIRSISKCAARMGQLF
Sbjct: 457 VIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLF 516
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
S+S+QT+EV + ++ +PDIEV SDGV YCFSDGIGKIS AFA+ + +K GL H PSAFQ
Sbjct: 517 STSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQ 576
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LR SMLKF+S N MLNITKWS++ PCYLNREI+ LLSTL
Sbjct: 577 IRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTL 636
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKK 710
GVED F + D L LG++LT EAA++VLES GGGE+K++L+RMLLQGY P +
Sbjct: 637 GVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPNQ 692
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 640 bits (1650), Expect(2) = 0.0
Identities = 301/420 (71%), Positives = 354/420 (84%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQSH ENQ++DLRSR RIF+PKGR+LVGCLDETGIL+YG+VYVR+TM KAE+Q
Sbjct: 693 EPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQ 752
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
G Q FF++VDE T+ NPCLHPGDVRVLEAV++V L+E VDC++FPQ
Sbjct: 753 -NGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQN 811
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGDLYFI WD++LIP +TVTPMDYTGRRPRIMDH+VTLEEIQ+FF
Sbjct: 812 GERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTGRRPRIMDHEVTLEEIQRFFV 871
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMISDTLG ISTAHL+HADREPDKAL+SKCL+LA LHSMAVDFAKTGA AEMPR LKPR
Sbjct: 872 DYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 931
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMERW+KPMY+S G LGKLYR ++ + ++ +D DAYD DL+V+GY++
Sbjct: 932 EFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEA 991
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
F++TA+THKE YLD M +LLNYYGAE EVEILTGNL++KS YLQRDNRRY E+KDR+LVS
Sbjct: 992 FIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVS 1051
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
K+L KEVKGWF C E + QKL SAWY+VTYHP+Y + S NCLGFPWVVGDIL++IKS
Sbjct: 1052 AKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTYHPSYCHESANCLGFPWVVGDILLNIKS 1111
Score = 352 bits (903), Expect(2) = 0.0
Identities = 172/236 (72%), Positives = 201/236 (85%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+F FLAFSASQLRSNSVWMFASNE+VKAEDIREWMGCFNKIRSISKCAARMGQLF
Sbjct: 457 VIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARMGQLF 516
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
S+S+QT+EV + ++ +PDIEV SDGV YCFSDGIGKIS AFA+ + +K GL H PSAFQ
Sbjct: 517 STSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQ 576
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LR SMLKF+S N MLNITKWS++ PCYLNREI+ LLSTL
Sbjct: 577 IRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTL 636
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDPKK 710
GVED + D L+ LG++LT EAA++VLES GGG++K++L+RMLLQGY P +
Sbjct: 637 GVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPNR 692
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 630 bits (1625), Expect(2) = 0.0
Identities = 303/421 (71%), Positives = 351/421 (83%), Gaps = 2/421 (0%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQSH ENQL+DLRSR RIF+ KGRVLVGCLDETGIL YGQVY R+TM KAE+Q
Sbjct: 694 EPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQ 753
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
Q FF++VDE T+ NPCLHPGDVRVLEAV++V L+E VDC++FPQK
Sbjct: 754 -SAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQK 812
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGDLYFISWD+NLIP +TVTPMDYTGRR RIMDH+VTL+EIQ+FF
Sbjct: 813 GERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFV 872
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMISDTLG ISTAHL+HADREPDKAL+ KCL+LA LHSMAVDFAKTGA AEMPR LKPR
Sbjct: 873 DYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPR 932
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPS--DAYDPDLIVDGY 1605
EFPDF+ERW+KPMY+S G LGKLYRA V +++N+D ++ + DAYD L+ DGY
Sbjct: 933 EFPDFLERWDKPMYISEGVLGKLYRAIVN--SSVRSNSDDLGSVRAIQDAYDHALLFDGY 990
Query: 1606 DSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVL 1785
++F++TA+ HKE YLD M +LLNYYGAE EVEILTGNL++KS YLQRDNRRY E+KDR+L
Sbjct: 991 EAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRIL 1050
Query: 1786 VSVKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDI 1965
VS K+L KEVKGWF C E E +KLASAWY+VTYHP+Y GS NCLGFPWVVGDIL+DI
Sbjct: 1051 VSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPSYCEGSANCLGFPWVVGDILLDI 1110
Query: 1966 K 1968
K
Sbjct: 1111 K 1111
Score = 351 bits (900), Expect(2) = 0.0
Identities = 172/234 (73%), Positives = 197/234 (84%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+F FLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRS+SKCAARMGQLF
Sbjct: 458 VIGSKRFLFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLF 517
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
S+S QT+EV ++ +PDIEV SDGV YCFSDGIGKIS AFA + +K GL + PSAFQ
Sbjct: 518 STSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQ 577
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LR SMLKF+S N MLNITKWS++ PCYLNREI+ LLSTL
Sbjct: 578 IRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTL 637
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GVED VF + D L LG++LT EAA++VLES GGG++K++L+RML QGY P
Sbjct: 638 GVEDKVFEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKKILMRMLHQGYAP 691
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 624 bits (1608), Expect(2) = 0.0
Identities = 294/420 (70%), Positives = 350/420 (83%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS ++QS+ ENQL+DL++R RIFVPKG+VL+GCLDETGILEYGQVYVR+TM KAE++
Sbjct: 689 EPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELE 748
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
G NQ FFR+VD+ TS NPCLHPGDVRVLEAV+D KL+E LVDCLVFPQK
Sbjct: 749 AG-NQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQK 807
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGDL+FISWD NLIPPRT PMDY GRRPRIMDHDVTLEEIQKFF
Sbjct: 808 GERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKFFV 867
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHLIHADREP+KA S CL+LA LHSMAVDFAKTGAPAEMPRAL+PR
Sbjct: 868 DYMINDTLGGISTAHLIHADREPEKAFSENCLQLATLHSMAVDFAKTGAPAEMPRALRPR 927
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
++PDFMER ++PMYVS+GALGKLYRATV+ Q +N S+ AYD DL V+G++
Sbjct: 928 DYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEE 987
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
F+ AE+H++ Y+D+M ++NYY ESE E+LTGNL+K++ YLQRDNRRY EVKDR+L++
Sbjct: 988 FIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLA 1047
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
VK+L +E KGWF+ SC+ EQQK+ASAWY+VTYHP Y S NCL FPW+ GDIL++IKS
Sbjct: 1048 VKSLQREAKGWFEGSCEAMEQQKMASAWYHVTYHPNYYQKSINCLSFPWIKGDILLNIKS 1107
Score = 336 bits (861), Expect(2) = 0.0
Identities = 162/234 (69%), Positives = 199/234 (85%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
+IG K++EFLAFSASQLRS++VWMFASN++VKAEDIREWMGCFNKIRS+SKCAARMGQLF
Sbjct: 453 LIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAARMGQLF 512
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS QTL V +D++ IPD+EV +DG+ YCFSDGIGKIS +FA+ + +K GL PSAFQ
Sbjct: 513 SSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKETPSAFQ 572
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI V+R SFRKL+LRSSMLKF+S+N MLN+TKWS S PCYLNREI++LLS+L
Sbjct: 573 IRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVSLLSSL 632
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D FLA+ EQL LG++ T EAA+NVLE+ G + +L++MLLQGY+P
Sbjct: 633 GVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEP 686
>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 602 bits (1552), Expect(2) = 0.0
Identities = 285/423 (67%), Positives = 346/423 (81%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQ++ EN L+DL+SR RIFVPKGRVLVGCLDETG L+YGQVYVR+TM KAE +
Sbjct: 692 EPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQE 751
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
G +Q FF++VDE T NPCLHPGDVRVL+AV+DV L+E N+VDCL+FPQK
Sbjct: 752 MG-DQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQK 810
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGDL+FISWD +L+P TV PMDY+ RRPRIMDH VTLEEIQKFF
Sbjct: 811 GERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFV 870
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+D LG ISTAHL+HAD EPDKAL+ KCL+LA+LHSMAVDFAKTGAPAEM R LKP+
Sbjct: 871 DYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPK 930
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER +KPMY+S+GALGKLYRA V + Q KTN S+ I AYD DL VDG +S
Sbjct: 931 EFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLES 990
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
L+ A+ H++ Y+++M T++NYYGA +E EILTGNL+ ++ YLQRDNRRYG++KDR+ +S
Sbjct: 991 VLEVAKGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLS 1050
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
+KNL KE KG F+SSC +E Q++ASAWY+VTYHP+Y NCL FPW+VGDIL++IK+
Sbjct: 1051 LKNLQKEAKGLFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIKA 1110
Query: 1972 AKN 1980
N
Sbjct: 1111 LNN 1113
Score = 337 bits (864), Expect(2) = 0.0
Identities = 164/234 (70%), Positives = 198/234 (84%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG+K+FEFLAFSASQLRS+SVWMF+SN++VKAEDIREWMGCF+KIRSISKCAARMGQLF
Sbjct: 456 VIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLF 515
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS QTL V +D++ IPD+E SDGV YCFSDGIGKIS +FA+ + +K GL PSAFQ
Sbjct: 516 SSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQ 575
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VD +SFRKL+LRSSMLKF+S N MLN+TKWS++ PCYLNREII+LLSTL
Sbjct: 576 IRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTL 635
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D F A+Q+EQL+ LG++ T+ AA+NV E G + K L++MLL GY+P
Sbjct: 636 GVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEP 689
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 593 bits (1530), Expect(2) = 0.0
Identities = 295/427 (69%), Positives = 343/427 (80%), Gaps = 4/427 (0%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYL +L+S+LENQ+ADLR+R R+FVPKGRVL+G LDE G LEYGQVYVRVTMNK+EV
Sbjct: 674 EPYLHMMLRSYLENQIADLRTRCRVFVPKGRVLLGVLDEFGRLEYGQVYVRVTMNKSEV- 732
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
G Q +FR VD N+S NPCLHPGDVRVLEAV D +L NLVDCLVFPQK
Sbjct: 733 -GEKQPYFRSVDGNSSVVVGKVVITKNPCLHPGDVRVLEAVCDPELVSENLVDCLVFPQK 791
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G RPHPNECSGGDLDGDLYF+SWD +L+PPRTV PMDYTGRRPRIMDHDVT++EIQ+FFA
Sbjct: 792 GHRPHPNECSGGDLDGDLYFVSWDTDLVPPRTVDPMDYTGRRPRIMDHDVTIQEIQRFFA 851
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYM+SDTLG IS AHL+HADREP+KALSSKCLELA LHS AVD+AK+GAPA MPRAL PR
Sbjct: 852 DYMVSDTLGAISNAHLVHADREPEKALSSKCLELAALHSTAVDYAKSGAPAAMPRALLPR 911
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDA-YDPDLIVDGYD 1608
E+PDFMER KP Y S G LGKLYRA ++FI Q + ++ IPS +D DL+ DG++
Sbjct: 912 EYPDFMERVGKPTYPSTGPLGKLYRAALRFIGQRNS----ANEIPSRGFFDGDLVADGHE 967
Query: 1609 SFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLV 1788
+FL+TA +H+E+Y + MG LL+YYGAE E EILTGN++ KS YL RDNRRYGEVKDR+LV
Sbjct: 968 AFLETALSHRERYSERMGQLLSYYGAEDEAEILTGNIESKSSYLSRDNRRYGEVKDRILV 1027
Query: 1789 SVKNLMKEVKGWF---KSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILM 1959
SVK+LMKE K WF SS E + +KLASAWY VTYHP Y G +NC GFPW VG +LM
Sbjct: 1028 SVKSLMKEAKVWFGDGLSSEKEGDDRKLASAWYVVTYHPRYGVGRRNCSGFPWAVGSVLM 1087
Query: 1960 DIKSAKN 1980
DIK+AKN
Sbjct: 1088 DIKAAKN 1094
Score = 342 bits (877), Expect(2) = 0.0
Identities = 169/233 (72%), Positives = 197/233 (84%)
Frame = +3
Query: 6 IGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLFS 185
IG+KKFEFLAFSASQLRSNSVWMFASN+ +K+ DIR+WMGCFN IRSISKCAARMGQLFS
Sbjct: 439 IGEKKFEFLAFSASQLRSNSVWMFASNDSIKSVDIRDWMGCFNSIRSISKCAARMGQLFS 498
Query: 186 SSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQI 365
SS QT+EV P + + IPD+E SDGVKYCFSDGIGKIS +FA++I LGL H+PSAFQI
Sbjct: 499 SSRQTIEVSPGETELIPDVECFSDGVKYCFSDGIGKISSSFAQEISSMLGLSHVPSAFQI 558
Query: 366 RYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLG 545
RYGGYKG++VV+R S KLALRSSMLKF+SNN MLN+TKWSESQPCYLNREII LLSTLG
Sbjct: 559 RYGGYKGIVVVNRHSRYKLALRSSMLKFESNNRMLNVTKWSESQPCYLNREIIVLLSTLG 618
Query: 546 VEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
V+D+ L MQ QL+ LG +L ++AA++VLES+G GE K +L RML GY P
Sbjct: 619 VKDAALLEMQQRQLEFLGSVLVDSQAAMSVLESSGMGESKSILPRMLSLGYKP 671
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 590 bits (1522), Expect(2) = 0.0
Identities = 282/423 (66%), Positives = 339/423 (80%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +L SH ENQL+DL+SR RI+VPKGR+L+GC DETGIL YGQV+VRVTM + E++
Sbjct: 707 EPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELE 766
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
+Q FF RVD+ TS NPCLHPGDVRVLEAV+++KL+E + VDC++FPQK
Sbjct: 767 -SKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQK 825
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGD++FISWD++LIP T PMDYTGRR RIMDHDVTLEEI KFF
Sbjct: 826 GERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFV 885
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADR+PDKA SSKCL LA LHSMAVDFAKTGAPAEMP ALKP+
Sbjct: 886 DYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPK 945
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER +KP Y+S G LGKLYRAT+ I Q+++NA S+ I +YD DL VDG+++
Sbjct: 946 EFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEA 1005
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
FL AE+HKE Y +EM L+NYYGA +E EILTGNL+ ++ YLQRDNRRYG++KDR+L+S
Sbjct: 1006 FLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLS 1065
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
KNL E K WF SSC E E +LASAWY+VTY P+Y L FPW+VGDIL++IKS
Sbjct: 1066 AKNLQNEAKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKS 1125
Query: 1972 AKN 1980
+
Sbjct: 1126 VNS 1128
Score = 342 bits (877), Expect(2) = 0.0
Identities = 166/234 (70%), Positives = 196/234 (83%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIGDK +EFLAFSASQLR+NSVWMFASN+ V AED+REWMGCFNKI S+SKCAARMGQLF
Sbjct: 471 VIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARMGQLF 530
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS QTL V +D++ IPD+EV SDG YCFSDGIGKIS +FA+ + +K GL H PSAFQ
Sbjct: 531 SSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQ 590
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LR SMLKF+S N MLN+TKWSES PC+LNREII+LLSTL
Sbjct: 591 IRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTL 650
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D VF AMQ +QL LG++L EAA++VL+ G + K +L++MLLQGY+P
Sbjct: 651 GVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEP 704
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 592 bits (1525), Expect(2) = 0.0
Identities = 282/423 (66%), Positives = 343/423 (81%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQ++ E+QL+D+R+R RIFVPK RVL+GCLDETGIL YGQVYVRVTM KAE +
Sbjct: 691 EPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHK 750
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
C NQ FF++VD+ TS NPCLHPGD+RVL+AV++V+L+E LVDC++FPQK
Sbjct: 751 CR-NQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQK 809
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGD +FI WD+ LIP +T PMDYT RRPRIMDHDVTLEEIQKFF
Sbjct: 810 GERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFV 869
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADREP+KA S KCLELA LHSMAVDFAKTGAPAEMPR LKP+
Sbjct: 870 DYMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPK 929
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER +KPMY+S+GALGKLYRAT+ K++ S IP AYD DL VDG+++
Sbjct: 930 EFPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFET 989
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
FL+ A+ HKE Y ++M TL+N+YGAESE E+LTGNL+ K YLQRDNRR+ E+KDR+L+S
Sbjct: 990 FLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILIS 1049
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
VK+L KE K W SC + QK+ASAWY+VTYH T+ + + N L FPW+VG++L+ IKS
Sbjct: 1050 VKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHSTFSSQTPNFLSFPWIVGEVLLVIKS 1109
Query: 1972 AKN 1980
A +
Sbjct: 1110 ANS 1112
Score = 339 bits (869), Expect(2) = 0.0
Identities = 167/234 (71%), Positives = 197/234 (84%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+F+FLAFSASQLRSNSVWMFASN+ V+ +DIREWMGCF KIRS+SKCAARMGQLF
Sbjct: 455 VIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLF 514
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS+QTL V +D++ IPDIEV SDG YCFSDGIGKIS +FAK + +K GL PSAFQ
Sbjct: 515 SSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQ 574
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LRSSMLKF+S N MLN+TKWSES PCYLNREI++LLSTL
Sbjct: 575 IRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTL 634
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GVED F A+ +EQ+ L ++LT +AA++VLES GG + K +L +MLLQGY+P
Sbjct: 635 GVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEP 688
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 585 bits (1507), Expect(2) = 0.0
Identities = 279/434 (64%), Positives = 349/434 (80%), Gaps = 2/434 (0%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQ+H E+ LADL+SR R++VPKGR+LVGCLDETG L YGQVY+R+TM KAE +
Sbjct: 694 EPYLSMMLQAHYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQE 753
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
G +Q FF+RVDE T NPCLHPGD+RVLEAV+DV L+E N+VDC++FPQK
Sbjct: 754 MG-HQSFFQRVDEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQK 812
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGDL+FISWD +LIPP TV PMDY+ RRPR MDHDVTLEEIQKFF
Sbjct: 813 GERPHPNECSGGDLDGDLFFISWDKSLIPPTTVPPMDYSARRPRNMDHDVTLEEIQKFFV 872
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+D LG ISTAHL+H+D EP+KA+S KCLELA+LHSMAVDFAKTGAPAE+ LKP+
Sbjct: 873 DYMINDNLGAISTAHLVHSDHEPEKAMSKKCLELADLHSMAVDFAKTGAPAELSWILKPK 932
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER E+PMY+S+GALGKLYRA + Q +T S +AYD +L V G++S
Sbjct: 933 EFPDFMERVERPMYISNGALGKLYRAIRSSVVQEQTIVVWSQQRAEEAYDRELEVQGFES 992
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
FL+ AE+H+++Y+++M +L+NYY A +E EILTGNL+ ++ YLQRDNRRY ++KDR+L+S
Sbjct: 993 FLEMAESHRDKYIEKMRSLMNYYEATTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLS 1052
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
+K L KE KGWF+SSC +EQQ+LASAWY+VTY+ Y NCL FPW+VGDIL++IKS
Sbjct: 1053 LKTLQKEAKGWFESSCKVSEQQRLASAWYHVTYNLAYFQEDMNCLSFPWIVGDILLNIKS 1112
Query: 1972 --AKNGMIVEYSVE 2007
++ IV ++E
Sbjct: 1113 LNSRRSRIVTSALE 1126
Score = 342 bits (876), Expect(2) = 0.0
Identities = 166/234 (70%), Positives = 193/234 (82%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIGDK+FEFLAFSASQLRSNSVWMFASN+ VKAEDIR+WMGCFNKIRS+SKCAARMGQLF
Sbjct: 458 VIGDKRFEFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAARMGQLF 517
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS QTL V +D++ IPDIE +DGV YCFSDGIGKIS +FA+ + +K GL PSAFQ
Sbjct: 518 SSSTQTLTVPQKDVELIPDIETTTDGVSYCFSDGIGKISLSFARQVAQKCGLNDTPSAFQ 577
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LRSSMLKFDS+N MLN+TKWS S PC+LNREIITL+STL
Sbjct: 578 IRYGGYKGVIAVDRNSFRKLSLRSSMLKFDSDNRMLNVTKWSSSMPCFLNREIITLMSTL 637
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GVED F A+Q EQL LGR+ A++ LE G + +L+++LLQGY+P
Sbjct: 638 GVEDEAFEALQQEQLDLLGRMRKDRNVALSSLEKLSGADSNNILVKLLLQGYEP 691
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 583 bits (1502), Expect(2) = 0.0
Identities = 279/420 (66%), Positives = 334/420 (79%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQ++ EN L +LRSR RIFVPKGR+L+GCLDE+GIL+YGQVYVR+TM KAE+Q
Sbjct: 686 EPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQ 745
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
C +Q FFR+VDE+TS NPCLHPGD+RVLEAV+DV+L+E LVDC++FPQ
Sbjct: 746 CC-DQSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQN 804
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G RPHPNECSGGDLDGD +FISWD+ L+P T PMDY G R RIMDH+VTLEEIQ+FF
Sbjct: 805 GGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQRFFV 864
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HAD EPDKA S KCL+LA LHSMAVDFAKTGAPAEMP LKPR
Sbjct: 865 DYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTGAPAEMPLYLKPR 924
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER EK MY+S G LGKLYR Q ++N S I YD DL V G++
Sbjct: 925 EFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFED 984
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
FL A +KE+Y+++M TL++YYGA++E EILTGNL+ + YLQRDNR+YG+VKDR+LVS
Sbjct: 985 FLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVS 1044
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
+KNL KE K WF+SSC+ E Q +ASAWY+VTYHPTY + NCL FPW+VGDIL++IKS
Sbjct: 1045 LKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHPTYFHERMNCLSFPWIVGDILLNIKS 1104
Score = 343 bits (881), Expect(2) = 0.0
Identities = 167/234 (71%), Positives = 197/234 (84%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+FEFLAFSASQLRSNSVWMFASN VKAEDIR+WMGCF+KIRS+SKCAARMGQLF
Sbjct: 450 VIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQLF 509
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS+QT V +D++ IPDIEV +DG+ YCFSDGIGKIS +FAK + K GL H PSAFQ
Sbjct: 510 SSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQ 569
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGV+ VDR SFRKL+LRSSMLKFDS N MLN+TKWSES PCYLNREII+LLSTL
Sbjct: 570 IRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIISLLSTL 629
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV D +F A+Q +QL L ++LT E+A++VLE+ + K +L++MLLQGY+P
Sbjct: 630 GVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGYEP 683
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 578 bits (1490), Expect(2) = 0.0
Identities = 277/431 (64%), Positives = 338/431 (78%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQ++ EN L +LRSR RIFVPKGR+L+GCLDET IL+YGQVYVR+TM KAE+Q
Sbjct: 541 EPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQ 600
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
+Q F RVDE T+ NPCLHPGD+RVLEAV++V+L+E LVDC++FPQK
Sbjct: 601 -DADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQK 659
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGD +FISWD LIP T +PMDY GRRPR MDHDVTLEEIQKFF
Sbjct: 660 GERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFI 719
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADREPDKA SSKCL+LA LHSMAVDFAKTGAPAEMP+ALKP+
Sbjct: 720 DYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPK 779
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER +K MY+S G LGKLYR T+ Q ++ ++ I YD DL V G++
Sbjct: 780 EFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEE 839
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
F++ A +HK+ Y++++ L++YY A+ E EILTGNLQ K+ YLQRDNRRYG+ KDR+L+S
Sbjct: 840 FVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILIS 899
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
VK+L KE K WF+S C E+Q+LASAWY+VTYHP+Y CL FPW+V DIL++IKS
Sbjct: 900 VKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIKS 959
Query: 1972 AKNGMIVEYSV 2004
A + + SV
Sbjct: 960 ANSKNLKTSSV 970
Score = 343 bits (879), Expect(2) = 0.0
Identities = 168/234 (71%), Positives = 194/234 (82%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG KKFEFLAFSASQLRSNSVWMFASN+ KAE+IREWMGCFNKI SISKCAARMGQLF
Sbjct: 305 VIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARMGQLF 364
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS QT V P+D++ IPDIEV SDG+ YCFSDGIGKIS +FA+ + +K GL PSAFQ
Sbjct: 365 SSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRTPSAFQ 424
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LR SM KF+S N MLN+TKWSES PCYLNREIITLL+TL
Sbjct: 425 IRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIITLLTTL 484
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D +F +Q +QLQ L R+LT E+A+NVLE+ K +LI+ML+QGY+P
Sbjct: 485 GVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEP 538
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 584 bits (1505), Expect(2) = 0.0
Identities = 277/420 (65%), Positives = 334/420 (79%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +LQ+H N +DLRSR RIFVPKGR+L+GCLDETGIL YGQVY +T+ K+E+Q
Sbjct: 691 EPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQ 750
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
NQ +F +DE S NPCLHPGDVRVLEA++ V+L+E LVDCL+FPQK
Sbjct: 751 -SRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQK 809
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G RPH NECSGGDLDGDLYFISWD+NLIPP+T PMDYTGRRPRIMDHDV LEEIQKFF
Sbjct: 810 GARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFV 869
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADREP KALS+KCLELA LHSMAVDFAKTGAPAEMPR LKPR
Sbjct: 870 DYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPR 929
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFMER++KPMY+S LGKLYRA V+ I Q ++ S+ YD DL VDG+++
Sbjct: 930 EFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEA 989
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
FL+ AET+KE Y+++M L+NYYGAE E EIL G+L+ ++ YLQRDNR+YG++KDR+L+S
Sbjct: 990 FLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLS 1049
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKS 1971
VKNL KEVK WF++SCD ++ +ASAWY+VTYHP+Y FPW V D+L++IK+
Sbjct: 1050 VKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKA 1109
Score = 327 bits (837), Expect(2) = 0.0
Identities = 162/234 (69%), Positives = 192/234 (82%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+FEFLAFSASQLRSNSVWMFAS++++KAE+IR+WMGCF KIRSISKCAARMGQLF
Sbjct: 455 VIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLF 514
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS QTL V RD++ IPDIEV +DG+ YCFSDGIGKIS +FA+ + K G+ HIPSAFQ
Sbjct: 515 SSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQ 574
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGVI VDR SFRKL+LR SMLKF+S N MLN+TK +S PCYLNREI TLLSTL
Sbjct: 575 IRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTL 634
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D F A+Q EQL L R+LT + A+NVLE+ G + +L++ML GY+P
Sbjct: 635 GVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEP 688
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 575 bits (1482), Expect(2) = 0.0
Identities = 271/421 (64%), Positives = 336/421 (79%)
Frame = +1
Query: 709 NEPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEV 888
+EPYLS +L++H QL+DL+SR RIFVPKGRVL+GCLDETGIL YGQV+VR+T+ K +
Sbjct: 695 SEPYLSMMLKAHYAYQLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVFVRITVTKTKE 754
Query: 889 QCGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQ 1068
+ G D++T NPCLHPGD+RVL+A+++ +L+E L DCLVFPQ
Sbjct: 755 KIGDENLQNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLVFPQ 814
Query: 1069 KGDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFF 1248
KG RPHPNECSGGDLDGDL+FISWD +LIPP+T PMDYTGRRPRIMDH VTLEEI +FF
Sbjct: 815 KGPRPHPNECSGGDLDGDLFFISWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLEEIHQFF 874
Query: 1249 ADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKP 1428
DYMI+DTLG ISTAHL+HADREP+KA S KCLELA LHSMAVDFAKTGAPAEMPRALKP
Sbjct: 875 VDYMINDTLGAISTAHLVHADREPEKARSRKCLELAELHSMAVDFAKTGAPAEMPRALKP 934
Query: 1429 REFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYD 1608
REFPDFMER++KPMY+S+G LGKLYRA V+ Q+++N LS+ +AYD L V+G++
Sbjct: 935 REFPDFMERFDKPMYISNGVLGKLYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGFE 994
Query: 1609 SFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLV 1788
+FL+TA +HKE Y +M +L+++Y AE+E E+LTGNLQ ++ YLQRDNRRYG++KDR+L+
Sbjct: 995 AFLETASSHKEMYAQKMSSLMSFYDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRILI 1054
Query: 1789 SVKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIK 1968
SVK+L +E K WF+S C E Q +ASAWY+VTYHP Y + S L FPW+VGDIL+ IK
Sbjct: 1055 SVKDLQREAKEWFESDCQPHEYQLMASAWYHVTYHPKYSHESSTFLSFPWIVGDILLHIK 1114
Query: 1969 S 1971
S
Sbjct: 1115 S 1115
Score = 333 bits (855), Expect(2) = 0.0
Identities = 166/236 (70%), Positives = 197/236 (83%), Gaps = 2/236 (0%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+FEFLAFSASQLRSNSVW+FASN+ VKAEDIREWMG F IRS+SKCAARMGQLF
Sbjct: 458 VIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAARMGQLF 517
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGL--PHIPSA 356
SSS QT E+ P+D+D IPDIE+ SDG+ YCFSDGIGKIS +FAK + +KL L IPSA
Sbjct: 518 SSSKQTFEMAPQDVDIIPDIELTSDGINYCFSDGIGKISLSFAKQLAQKLKLDQSRIPSA 577
Query: 357 FQIRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLS 536
FQIRYGGYKGVI VDR SFRKL++R+SMLKF+S N ML +TKWSES PC+LNREII+LLS
Sbjct: 578 FQIRYGGYKGVIAVDRHSFRKLSMRNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLS 637
Query: 537 TLGVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
TLGV+D LAMQ+EQLQ LG++LT EAA++VLES G + + +L++ML Y+P
Sbjct: 638 TLGVKDEALLAMQEEQLQLLGKMLTDREAALDVLESLSGADSRSILVKMLNGFYEP 693
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 577 bits (1487), Expect(2) = 0.0
Identities = 277/421 (65%), Positives = 330/421 (78%), Gaps = 1/421 (0%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
+PYLS +LQ+H EN L+DL+SR RIFVPKGR+L+GCLDETG L YGQVY+ + M KAE++
Sbjct: 691 QPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELE 750
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
C +Q +FR+VDE T+ NPCLHPGDVRVLEAV++ +L+E LVDCLVFPQK
Sbjct: 751 CA-DQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQK 809
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGD +FISWD +LIP +T PMDYTGRRPRIMDH+VTLEEIQKFF
Sbjct: 810 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFV 869
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADREPDKA S CL LA LHSMAVDFAKTGAPAEMPRALKPR
Sbjct: 870 DYMINDTLGAISTAHLVHADREPDKACSENCLALATLHSMAVDFAKTGAPAEMPRALKPR 929
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFM+R KPMY S G LGKLYRAT+ Q ++ + + YD DL V+G++S
Sbjct: 930 EFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWTKEMAELVYDHDLEVNGFES 989
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
+ AETHKE Y + M L++YY E E EILTGN+ K+ +L RDNRRYGE+K+R+++S
Sbjct: 990 LISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIVLS 1049
Query: 1792 VKNLMKEVKGWFKSSCDEA-EQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIK 1968
VK+L +E K WFKSSC +A E QKLASAWYYVTYHP Y N L FPW+VGDIL+ +K
Sbjct: 1050 VKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFQERMNSLSFPWIVGDILLRVK 1109
Query: 1969 S 1971
S
Sbjct: 1110 S 1110
Score = 330 bits (846), Expect(2) = 0.0
Identities = 164/234 (70%), Positives = 192/234 (82%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIGDK+FEFLAFSASQLRSNSVWMFASN+ VKAEDIREWMGCF KIRSISKCA+RMGQLF
Sbjct: 456 VIGDKRFEFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLF 515
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSSM TL V +D++ I DIEV +DG+ YCFSDGIGKIS FA+ + K GL HIPSAFQ
Sbjct: 516 SSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQ 575
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGV+ VDR SF K++LR SMLKF+S MLN+TKWSES PC+LNREI+TL STL
Sbjct: 576 IRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTL 635
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
G++D VF MQ+EQL LG++LT EAA++ L+S GG K +L+ M LQ Y+P
Sbjct: 636 GIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEM-LQFYEP 688
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 575 bits (1481), Expect(2) = 0.0
Identities = 277/421 (65%), Positives = 331/421 (78%), Gaps = 1/421 (0%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
+PYLS +LQ+H EN L+DL+SR RIFVPKGR+L+GCLDETG L YGQVY+ + M KAE++
Sbjct: 691 QPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELE 750
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
C +Q +FR+VDE T+ NPCLHPGDVRVLEAV++ +L+E LVDCLVFP+K
Sbjct: 751 CA-DQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEK 809
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGD +FISWD +LIP +T PMDYTGRRPRIMDH+VTLEEIQKFF
Sbjct: 810 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFV 869
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADREP KA S CL LA LHSMAVDFAKTGAPAEMPRALKPR
Sbjct: 870 DYMINDTLGAISTAHLVHADREPYKARSENCLALATLHSMAVDFAKTGAPAEMPRALKPR 929
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFM+R KPMY S G LGKLYRAT+ Q+++ + + AYD DL V+G++S
Sbjct: 930 EFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFES 989
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
+ AETHKE Y + M L++YY E E EILTGN+ K+ +L RDNRRYGE+K+R+++S
Sbjct: 990 LISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLS 1049
Query: 1792 VKNLMKEVKGWFKSSCDEA-EQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIK 1968
VK+L +E K WFKSSC +A E QKLASAWYYVTYHP Y N L FPW+VGDIL+ IK
Sbjct: 1050 VKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFEERMNSLSFPWIVGDILLRIK 1109
Query: 1969 S 1971
S
Sbjct: 1110 S 1110
Score = 326 bits (836), Expect(2) = 0.0
Identities = 160/228 (70%), Positives = 188/228 (82%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIGDK+F+FLAFSASQLRSNSVWMFASN+ VKAEDIREWMGCF KIRSISKCA+RMGQLF
Sbjct: 456 VIGDKRFKFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASRMGQLF 515
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSSM TL V +D++ I DIEV +DG+ YCFSDGIGKIS FA+ + K GL HIPSAFQ
Sbjct: 516 SSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQ 575
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGV+ VDR SF K++LR SMLKF+S MLN+TKWSES PC+LNREI+TL STL
Sbjct: 576 IRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVTLFSTL 635
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRML 686
G++D VF MQ+EQL LG++LT EAA++ L+S GG K +L+ ML
Sbjct: 636 GIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEML 683
>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
max]
Length = 1121
Score = 557 bits (1436), Expect(2) = 0.0
Identities = 268/429 (62%), Positives = 335/429 (78%), Gaps = 3/429 (0%)
Frame = +1
Query: 709 NEPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEV 888
+EPYLS +L+++ QL+DL+SR RIFVPKGRVLVGCLDETG+L YGQV+VR+T+ K
Sbjct: 693 SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTRE 752
Query: 889 QCGGNQRFFRRVD--ENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVF 1062
+ G R+VD +NT NPCLHPGD+RVL+A++ +L+E L DCLVF
Sbjct: 753 KFGDEN--LRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVF 810
Query: 1063 PQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQK 1242
PQKG RPHPNECSGGDLDGDL+FISWD +LIP +T PMDYTGRRPRIMDH VTLEEIQ+
Sbjct: 811 PQKGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQ 870
Query: 1243 FFADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRAL 1422
FF DYMI+DTLG ISTAHL+HADRE DKA S KCLELA LHSMAVDFAKTGAPA MPR L
Sbjct: 871 FFVDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVL 930
Query: 1423 KPREFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDG 1602
KPREFPDFMER +KPMY+S G LGKLYRA ++ Q++ + S+ +AYD L V+G
Sbjct: 931 KPREFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNG 990
Query: 1603 YDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRV 1782
+++FL+TA THKE Y ++M +L+++YGAE+E E+L GNLQ ++ YLQRDNRRYG++KDR+
Sbjct: 991 FEAFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRI 1050
Query: 1783 LVSVKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC-LGFPWVVGDILM 1959
L+SVKNL +E K WF++SC+ E + +ASAWY+VTYHP+Y C L FPW+VG+IL+
Sbjct: 1051 LLSVKNLQREAKEWFETSCEPHEYKPMASAWYHVTYHPSYYCRESPCFLSFPWIVGEILL 1110
Query: 1960 DIKSAKNGM 1986
I+S G+
Sbjct: 1111 QIRSVSKGV 1119
Score = 341 bits (875), Expect(2) = 0.0
Identities = 166/234 (70%), Positives = 200/234 (85%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+FEFLAFSASQLRSNSVW+FASN+++KA DIREWMGCFN IRS+SKCAARMGQLF
Sbjct: 458 VIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARMGQLF 517
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSSMQT EV +D++ IPD+EV+SDGV YCFSDGIGKIS +FA+ + +KL L H PSAFQ
Sbjct: 518 SSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQ 577
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGG+KGVI VDR+SFRKL+LRSSMLKF+S N ML +TKWSES PC+LNREII+LLSTL
Sbjct: 578 IRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIISLLSTL 637
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D V LAMQ +QL LGR+LT ++AA+ VLES G + K +L++ML + +P
Sbjct: 638 GVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEP 691
>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
max]
Length = 941
Score = 557 bits (1436), Expect(2) = 0.0
Identities = 268/429 (62%), Positives = 335/429 (78%), Gaps = 3/429 (0%)
Frame = +1
Query: 709 NEPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEV 888
+EPYLS +L+++ QL+DL+SR RIFVPKGRVLVGCLDETG+L YGQV+VR+T+ K
Sbjct: 513 SEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTRE 572
Query: 889 QCGGNQRFFRRVD--ENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVF 1062
+ G R+VD +NT NPCLHPGD+RVL+A++ +L+E L DCLVF
Sbjct: 573 KFGDEN--LRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVF 630
Query: 1063 PQKGDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQK 1242
PQKG RPHPNECSGGDLDGDL+FISWD +LIP +T PMDYTGRRPRIMDH VTLEEIQ+
Sbjct: 631 PQKGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQ 690
Query: 1243 FFADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRAL 1422
FF DYMI+DTLG ISTAHL+HADRE DKA S KCLELA LHSMAVDFAKTGAPA MPR L
Sbjct: 691 FFVDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVL 750
Query: 1423 KPREFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDG 1602
KPREFPDFMER +KPMY+S G LGKLYRA ++ Q++ + S+ +AYD L V+G
Sbjct: 751 KPREFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNG 810
Query: 1603 YDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRV 1782
+++FL+TA THKE Y ++M +L+++YGAE+E E+L GNLQ ++ YLQRDNRRYG++KDR+
Sbjct: 811 FEAFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRI 870
Query: 1783 LVSVKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC-LGFPWVVGDILM 1959
L+SVKNL +E K WF++SC+ E + +ASAWY+VTYHP+Y C L FPW+VG+IL+
Sbjct: 871 LLSVKNLQREAKEWFETSCEPHEYKPMASAWYHVTYHPSYYCRESPCFLSFPWIVGEILL 930
Query: 1960 DIKSAKNGM 1986
I+S G+
Sbjct: 931 QIRSVSKGV 939
Score = 341 bits (875), Expect(2) = 0.0
Identities = 166/234 (70%), Positives = 200/234 (85%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+FEFLAFSASQLRSNSVW+FASN+++KA DIREWMGCFN IRS+SKCAARMGQLF
Sbjct: 278 VIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARMGQLF 337
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSSMQT EV +D++ IPD+EV+SDGV YCFSDGIGKIS +FA+ + +KL L H PSAFQ
Sbjct: 338 SSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQ 397
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGG+KGVI VDR+SFRKL+LRSSMLKF+S N ML +TKWSES PC+LNREII+LLSTL
Sbjct: 398 IRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIISLLSTL 457
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D V LAMQ +QL LGR+LT ++AA+ VLES G + K +L++ML + +P
Sbjct: 458 GVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEP 511
>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 563 bits (1450), Expect(2) = 0.0
Identities = 272/424 (64%), Positives = 335/424 (79%), Gaps = 1/424 (0%)
Frame = +1
Query: 712 EPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEVQ 891
EPYLS +L ++ + L+DL+ R RI+VPKG+VLVGCLDET L YGQVYVR+++ KAE++
Sbjct: 699 EPYLSMMLLANHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELE 758
Query: 892 CGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQK 1071
+Q FF +VDE T+ NPCLHPGDVRVLEAV++ +L++ LVDCLVFPQK
Sbjct: 759 -HADQNFFHKVDEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQK 817
Query: 1072 GDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFFA 1251
G+RPHPNECSGGDLDGD +FISWD +LIP +T PMDYTG RPRIMDH+VTLEEIQKFF
Sbjct: 818 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRIMDHEVTLEEIQKFFV 877
Query: 1252 DYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKPR 1431
DYMI+DTLG ISTAHL+HADREPDKA S KCLELA LHSMAVDFAKTGAPAEMPR+LKPR
Sbjct: 878 DYMINDTLGAISTAHLVHADREPDKARSEKCLELATLHSMAVDFAKTGAPAEMPRSLKPR 937
Query: 1432 EFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYDS 1611
EFPDFM+R +KPMY S G LGKLYRAT+ Q ++ S + YD DL V+G+++
Sbjct: 938 EFPDFMQRVDKPMYASLGVLGKLYRATINSTVQERSKFVWSKKMAEALYDHDLEVNGFEA 997
Query: 1612 FLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLVS 1791
FL TA+THK+ Y ++M L+NYY ESE EILTGN++ K+ +LQRDNRRYG++KDR+L+S
Sbjct: 998 FLSTAQTHKDMYEEKMSFLMNYYEVESEDEILTGNMRNKATFLQRDNRRYGDMKDRILLS 1057
Query: 1792 VKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGS-KNCLGFPWVVGDILMDIK 1968
+KNL +E + F++SC E Q+LASAWY+VTYHP Y S K+CL FPW+VGDIL+ IK
Sbjct: 1058 MKNLQREARERFENSCKVGEHQRLASAWYHVTYHPNYCQESMKSCLSFPWIVGDILLKIK 1117
Query: 1969 SAKN 1980
S +
Sbjct: 1118 SVNS 1121
Score = 335 bits (858), Expect(2) = 0.0
Identities = 161/234 (68%), Positives = 194/234 (82%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIGDK+FEFLAFSASQLRSNSVWMFASN+ V AED+REWMGCF KIRS+SKCAARMGQLF
Sbjct: 463 VIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAARMGQLF 522
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSS+ TL V +D+ IPDIEV SDG+ YCFSDGIGKIS FA+++ +K GL PSAFQ
Sbjct: 523 SSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDTPSAFQ 582
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IRYGGYKGV+ VDR SFRK++LR SM KF+S MLN+TKWSES PC+LNREI+TLLSTL
Sbjct: 583 IRYGGYKGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVTLLSTL 642
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
G++D F +Q EQL LG++LT EAA++VL+S G + + +L++MLLQGY+P
Sbjct: 643 GIKDEAFETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEP 696
>gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 557 bits (1435), Expect(2) = 0.0
Identities = 267/427 (62%), Positives = 332/427 (77%), Gaps = 1/427 (0%)
Frame = +1
Query: 709 NEPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEV 888
+EPYLS +L+++ QL+DL+SR RIFVPKGRVLVGCLDETG+L YG+V+VRVT+ +
Sbjct: 692 SEPYLSMMLKAYYAYQLSDLKSRSRIFVPKGRVLVGCLDETGLLNYGEVFVRVTVKRTTE 751
Query: 889 QCGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQ 1068
+ N R D++T NPCLHPGDVRVL+A+++ +L+E L DCLVFPQ
Sbjct: 752 KFDDNLRKGGD-DDSTRIIVGKVVVTKNPCLHPGDVRVLDAIYNEELEEKGLRDCLVFPQ 810
Query: 1069 KGDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFF 1248
G RPHPNECSGGDLDGDL+FISWD +LIP +T PMDYTGRRPRIMDH VTLEEIQ FF
Sbjct: 811 NGHRPHPNECSGGDLDGDLFFISWDKDLIPAQTEAPMDYTGRRPRIMDHKVTLEEIQHFF 870
Query: 1249 ADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKP 1428
DYMI+DTLG ISTAHL+HADREPDKA S KCLELA LHSMAVDFAKTGAPA MPR LKP
Sbjct: 871 VDYMINDTLGAISTAHLVHADREPDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKP 930
Query: 1429 REFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYD 1608
REFPDFMER EKPMY+S G LGKLYRA ++ Q+K + S+ + +AYD L V+G++
Sbjct: 931 REFPDFMERVEKPMYISKGVLGKLYRAIIESQMQIKYSFVWSEKLAEEAYDRSLEVNGFE 990
Query: 1609 SFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLV 1788
+FL+TA +HKE Y +M +L+N+YGAE+E E+L GNLQ ++ YLQRDNRRYG++KDR+L+
Sbjct: 991 AFLETASSHKEMYAQKMSSLMNFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILL 1050
Query: 1789 SVKNLMKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC-LGFPWVVGDILMDI 1965
SVKNL +E K WF++SC E + +ASAWY+VTYHP+Y +C L FPW+VG++L+ I
Sbjct: 1051 SVKNLQREAKEWFETSCQPHEYRPMASAWYHVTYHPSYYCQESSCFLSFPWIVGEVLLQI 1110
Query: 1966 KSAKNGM 1986
KS +
Sbjct: 1111 KSVNKAV 1117
Score = 338 bits (866), Expect(2) = 0.0
Identities = 164/234 (70%), Positives = 197/234 (84%)
Frame = +3
Query: 3 VIGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLF 182
VIG K+FEFLAFSASQLRSNSVW+FASN++VKA DIREWMGCFN IRS+SKCAARMGQLF
Sbjct: 457 VIGSKRFEFLAFSASQLRSNSVWLFASNDNVKATDIREWMGCFNNIRSVSKCAARMGQLF 516
Query: 183 SSSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQ 362
SSSMQT EV P+D++ IPDIEV SDGV YCFSDGIGKIS +F + + +KL L H PSAFQ
Sbjct: 517 SSSMQTFEVAPQDVEVIPDIEVTSDGVSYCFSDGIGKISQSFGRQVAQKLKLDHTPSAFQ 576
Query: 363 IRYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTL 542
IR+GGYKGVI VDR SFRKL+LR+SMLKF+S N ML +TKWSES PC+LNREII+LLSTL
Sbjct: 577 IRFGGYKGVITVDRHSFRKLSLRNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTL 636
Query: 543 GVEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
GV+D FLA Q +QL LGR+LT ++AA++VLE G + + +L++ML + +P
Sbjct: 637 GVKDEAFLARQQDQLNLLGRMLTDSKAALDVLEGLNGADSRSILVKMLHEFNEP 690
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 546 bits (1407), Expect(2) = 0.0
Identities = 257/422 (60%), Positives = 328/422 (77%), Gaps = 1/422 (0%)
Frame = +1
Query: 709 NEPYLSRVLQSHLENQLADLRSRGRIFVPKGRVLVGCLDETGILEYGQVYVRVTMNKAEV 888
+EPYLS +L+ H E+QL++L+SR RI VPKGR+L+GC+DE GILEYGQVYVRVT+ KAE+
Sbjct: 698 SEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAEL 757
Query: 889 QCGGNQRFFRRVDENTSXXXXXXXXXXNPCLHPGDVRVLEAVWDVKLQESNLVDCLVFPQ 1068
+ +Q +FR++DE TS NPCLHPGD+RVL+A+++V +E +DC++FPQ
Sbjct: 758 K-SRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQ 816
Query: 1069 KGDRPHPNECSGGDLDGDLYFISWDDNLIPPRTVTPMDYTGRRPRIMDHDVTLEEIQKFF 1248
KG+RPHPNECSGGDLDGD +F+SWD+ +IP PMDY G RPR+MDHDVTLEEI KFF
Sbjct: 817 KGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFF 876
Query: 1249 ADYMISDTLGTISTAHLIHADREPDKALSSKCLELANLHSMAVDFAKTGAPAEMPRALKP 1428
DYMISDTLG ISTAHL+HADR+P+KA S KCLELANLHS AVDFAKTGAPAEMP ALKP
Sbjct: 877 VDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKP 936
Query: 1429 REFPDFMERWEKPMYVSHGALGKLYRATVQFIHQMKTNADLSDAIPSDAYDPDLIVDGYD 1608
REFPDF+ER+EKP Y+S GKLYRA + Q K A+ D + AYD L G++
Sbjct: 937 REFPDFLERFEKPTYISESVFGKLYRAVKSSLAQRKPEAESEDTV---AYDVTLEEAGFE 993
Query: 1609 SFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQRDNRRYGEVKDRVLV 1788
SF++TA+ H++ Y +++ +L+ YYGA +E EILTG L+ K YL RDNRRYG++KDR+ +
Sbjct: 994 SFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITL 1053
Query: 1789 SVKNLMKEVKGWFKSSC-DEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDI 1965
SVK+L KE GWF+ SC DE +++KLASAWYYVTY+P + + L FPW+VGD+L+DI
Sbjct: 1054 SVKDLHKEAMGWFEKSCEDEQQKKKLASAWYYVTYNPNHRDEKLTFLSFPWIVGDVLLDI 1113
Query: 1966 KS 1971
K+
Sbjct: 1114 KA 1115
Score = 342 bits (878), Expect(2) = 0.0
Identities = 167/233 (71%), Positives = 192/233 (82%)
Frame = +3
Query: 6 IGDKKFEFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSISKCAARMGQLFS 185
+G K+FEFLAFSASQLR NSVWMFASNE VKAEDIREWMGCF KIRSISKCAARMGQLFS
Sbjct: 464 VGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFS 523
Query: 186 SSMQTLEVHPRDIDHIPDIEVVSDGVKYCFSDGIGKISYAFAKDIVRKLGLPHIPSAFQI 365
+S QTL V +D++ IPDIEV +DG YCFSDGIGKIS AFAK + +K GL H+PSAFQI
Sbjct: 524 ASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQI 583
Query: 366 RYGGYKGVIVVDRQSFRKLALRSSMLKFDSNNCMLNITKWSESQPCYLNREIITLLSTLG 545
RYGGYKGVI VDR SFRKL+LR SMLKFDSNN MLN+T+W+ES PC+LNREII LLSTLG
Sbjct: 584 RYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLG 643
Query: 546 VEDSVFLAMQDEQLQTLGRILTKTEAAVNVLESTGGGEMKRVLIRMLLQGYDP 704
+ED++F AMQ L LG +L +AA+NVL+ G K +L++MLLQGY P
Sbjct: 644 IEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAP 696