BLASTX nr result

ID: Rehmannia22_contig00012575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00012575
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   145   4e-33
gb|EXB39381.1| Pre-mRNA-splicing factor 18 [Morus notabilis]          145   5e-33
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   144   9e-33
ref|XP_006444054.1| hypothetical protein CICLE_v10020348mg [Citr...   144   2e-32
gb|EMJ01135.1| hypothetical protein PRUPE_ppa006327mg [Prunus pe...   144   2e-32
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   143   2e-32
gb|ESW21032.1| hypothetical protein PHAVU_005G035400g [Phaseolus...   142   6e-32
gb|EOX94743.1| Splicing factor Prp18 family protein isoform 1 [T...   142   6e-32
emb|CBI28698.3| unnamed protein product [Vitis vinifera]              142   6e-32
ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   142   6e-32
ref|NP_563676.1| splicing factor Prp18-like protein [Arabidopsis...   140   2e-31
ref|XP_006349682.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   140   2e-31
ref|XP_004247169.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   140   2e-31
ref|XP_006418262.1| hypothetical protein EUTSA_v10009621mg [Eutr...   139   5e-31
ref|XP_006306008.1| hypothetical protein CARUB_v10011298mg [Caps...   139   5e-31
ref|XP_002892149.1| splicing factor Prp18 family protein [Arabid...   139   5e-31
ref|XP_002307588.1| splicing factor Prp18 family protein [Populu...   137   2e-30
ref|XP_004493674.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   135   6e-30
ref|XP_004958093.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   134   1e-29
tpg|DAA63239.1| TPA: hypothetical protein ZEAMMB73_469845 [Zea m...   134   1e-29

>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
           gi|449491488|ref|XP_004158914.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  145 bits (367), Expect = 4e-33
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 334 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 393

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SGG    ++ERL +MPA +D
Sbjct: 394 LAEERVSGGGKLGSDERLRIMPAPED 419


>gb|EXB39381.1| Pre-mRNA-splicing factor 18 [Morus notabilis]
          Length = 415

 Score =  145 bits (366), Expect = 5e-33
 Identities = 75/87 (86%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPT+PSKAVEFNSLANGSDLQSL
Sbjct: 328 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSL 387

Query: 203 LAEERASGG-KFQSNEERLLLMPASKD 126
           LAEER SGG   Q+ EERL +MPA +D
Sbjct: 388 LAEERVSGGSSSQAGEERLRIMPAPRD 414


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score =  144 bits (364), Expect = 9e-33
 Identities = 72/86 (83%), Positives = 78/86 (90%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANGSDL SL
Sbjct: 327 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLHSL 386

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SGG   ++EERL +MPA +D
Sbjct: 387 LAEERFSGGNQAASEERLRIMPAPRD 412


>ref|XP_006444054.1| hypothetical protein CICLE_v10020348mg [Citrus clementina]
           gi|568852081|ref|XP_006479709.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Citrus sinensis]
           gi|557546316|gb|ESR57294.1| hypothetical protein
           CICLE_v10020348mg [Citrus clementina]
          Length = 416

 Score =  144 bits (362), Expect = 2e-32
 Identities = 75/86 (87%), Positives = 78/86 (90%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 331 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 390

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEE  SG   QS+EERL LMPA K+
Sbjct: 391 LAEETISGSN-QSSEERLRLMPAPKE 415


>gb|EMJ01135.1| hypothetical protein PRUPE_ppa006327mg [Prunus persica]
          Length = 417

 Score =  144 bits (362), Expect = 2e-32
 Identities = 72/83 (86%), Positives = 77/83 (92%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYP MPSKAVEFNSLANGSDLQSL
Sbjct: 334 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPAMPSKAVEFNSLANGSDLQSL 393

Query: 203 LAEERASGGKFQSNEERLLLMPA 135
           LA ERAS G  Q++EE+LL+MPA
Sbjct: 394 LASERASSGGNQASEEKLLIMPA 416


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  143 bits (361), Expect = 2e-32
 Identities = 73/86 (84%), Positives = 79/86 (91%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANGSDL SL
Sbjct: 326 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLHSL 385

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SGG  Q++EERL +MPA +D
Sbjct: 386 LAEERFSGGN-QASEERLRIMPAPRD 410


>gb|ESW21032.1| hypothetical protein PHAVU_005G035400g [Phaseolus vulgaris]
          Length = 411

 Score =  142 bits (357), Expect = 6e-32
 Identities = 72/86 (83%), Positives = 77/86 (89%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPT+PSKAVEFNSLANGSDLQSL
Sbjct: 325 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSL 384

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SG    ++EER  +MPA +D
Sbjct: 385 LAEERFSGVNQTTSEERFRIMPAPRD 410


>gb|EOX94743.1| Splicing factor Prp18 family protein isoform 1 [Theobroma cacao]
          Length = 415

 Score =  142 bits (357), Expect = 6e-32
 Identities = 72/86 (83%), Positives = 79/86 (91%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANGSDLQSL
Sbjct: 331 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSL 390

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEE+ SGG   S+++RL LMPA K+
Sbjct: 391 LAEEKVSGG--SSSDDRLRLMPAPKE 414


>emb|CBI28698.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  142 bits (357), Expect = 6e-32
 Identities = 75/86 (87%), Positives = 78/86 (90%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 74  SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 133

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SGG  Q++EERL LM   K+
Sbjct: 134 LAEERFSGGN-QASEERLHLMAPPKE 158


>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  142 bits (357), Expect = 6e-32
 Identities = 75/86 (87%), Positives = 78/86 (90%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 327 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 386

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SGG  Q++EERL LM   K+
Sbjct: 387 LAEERFSGGN-QASEERLHLMAPPKE 411


>ref|NP_563676.1| splicing factor Prp18-like protein [Arabidopsis thaliana]
           gi|4587563|gb|AAD25794.1|AC006550_2 Similar to gb|U51990
           pre-mRNA-splicing factor hPrp18 from Homo sapiens. ESTs
           gb|T46391 and gb|AA721815 come from this gene
           [Arabidopsis thaliana]
           gi|13430636|gb|AAK25940.1|AF360230_1 unknown protein
           [Arabidopsis thaliana] gi|15293173|gb|AAK93697.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189414|gb|AEE27535.1| splicing factor Prp18-like
           protein [Arabidopsis thaliana]
          Length = 420

 Score =  140 bits (353), Expect = 2e-31
 Identities = 73/87 (83%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 333 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 392

Query: 203 LAEERASGG-KFQSNEERLLLMPASKD 126
           LAEER  GG + Q +EERL LMP+  +
Sbjct: 393 LAEERFFGGNREQVSEERLRLMPSQSE 419


>ref|XP_006349682.1| PREDICTED: pre-mRNA-splicing factor 18-like [Solanum tuberosum]
          Length = 413

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/83 (86%), Positives = 76/83 (91%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYP MPSKAVEFNSLANGSDLQSL
Sbjct: 332 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPAMPSKAVEFNSLANGSDLQSL 391

Query: 203 LAEERASGGKFQSNEERLLLMPA 135
           LAEE  SGG  Q++EERL +MPA
Sbjct: 392 LAEEGTSGGS-QTSEERLRIMPA 413


>ref|XP_004247169.1| PREDICTED: pre-mRNA-splicing factor 18-like [Solanum lycopersicum]
          Length = 413

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/83 (86%), Positives = 76/83 (91%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYP MPSKAVEFNSLANGSDLQSL
Sbjct: 332 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPAMPSKAVEFNSLANGSDLQSL 391

Query: 203 LAEERASGGKFQSNEERLLLMPA 135
           LAEE  SGG  Q++EERL +MPA
Sbjct: 392 LAEEGTSGGS-QTSEERLRIMPA 413


>ref|XP_006418262.1| hypothetical protein EUTSA_v10009621mg [Eutrema salsugineum]
           gi|557096033|gb|ESQ36615.1| hypothetical protein
           EUTSA_v10009621mg [Eutrema salsugineum]
          Length = 424

 Score =  139 bits (349), Expect = 5e-31
 Identities = 72/87 (82%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 337 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 396

Query: 203 LAEERASGGKFQS-NEERLLLMPASKD 126
           LAEER  GG  +  +EERL LMP+  +
Sbjct: 397 LAEERFFGGNREHVSEERLRLMPSQNE 423


>ref|XP_006306008.1| hypothetical protein CARUB_v10011298mg [Capsella rubella]
           gi|482574719|gb|EOA38906.1| hypothetical protein
           CARUB_v10011298mg [Capsella rubella]
          Length = 425

 Score =  139 bits (349), Expect = 5e-31
 Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 338 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 397

Query: 203 LAEERASGG-KFQSNEERLLLMPASKD 126
           LAEER  GG + + +EERL LMP+  +
Sbjct: 398 LAEERFFGGDRERVSEERLRLMPSQSE 424


>ref|XP_002892149.1| splicing factor Prp18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337991|gb|EFH68408.1| splicing factor
           Prp18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 417

 Score =  139 bits (349), Expect = 5e-31
 Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 330 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 389

Query: 203 LAEERASGG-KFQSNEERLLLMPASKD 126
           LAEER  GG + + +EERL LMP+  +
Sbjct: 390 LAEERFFGGDRERVSEERLRLMPSQSE 416


>ref|XP_002307588.1| splicing factor Prp18 family protein [Populus trichocarpa]
           gi|222857037|gb|EEE94584.1| splicing factor Prp18 family
           protein [Populus trichocarpa]
          Length = 420

 Score =  137 bits (344), Expect = 2e-30
 Identities = 72/83 (86%), Positives = 74/83 (89%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPTMPSKAVEFNSLANGSDLQSL
Sbjct: 335 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 394

Query: 203 LAEERASGGKFQSNEERLLLMPA 135
           LAEER   G  Q +E RL LMPA
Sbjct: 395 LAEERVFDGN-QPSEGRLRLMPA 416


>ref|XP_004493674.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cicer arietinum]
          Length = 411

 Score =  135 bits (340), Expect = 6e-30
 Identities = 70/86 (81%), Positives = 77/86 (89%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANGSDLQSL
Sbjct: 326 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSL 385

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           LAEER SG   Q++EERL +M   ++
Sbjct: 386 LAEERFSGVN-QTSEERLRIMAPPRE 410


>ref|XP_004958093.1| PREDICTED: pre-mRNA-splicing factor 18-like [Setaria italica]
          Length = 441

 Score =  134 bits (338), Expect = 1e-29
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMT  QRRYP +PSK+VEFNSLANGSDLQ+L
Sbjct: 359 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQAL 418

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           L+EE  SG   +++EERL LMPASK+
Sbjct: 419 LSEENGSG---KASEERLRLMPASKE 441


>tpg|DAA63239.1| TPA: hypothetical protein ZEAMMB73_469845 [Zea mays]
          Length = 117

 Score =  134 bits (338), Expect = 1e-29
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = -3

Query: 383 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANGSDLQSL 204
           SAREKIYTNSVAHIMNDETTRKYLQSIKRLMT  QRRYP +PSK+VEFNSLANGSDLQ+L
Sbjct: 35  SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQAL 94

Query: 203 LAEERASGGKFQSNEERLLLMPASKD 126
           L+EE  SG   +++EERL LMPASK+
Sbjct: 95  LSEENGSG---KASEERLRLMPASKE 117


Top