BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00012221
         (1240 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19710.3| unnamed protein product [Vitis vinifera]              327   8e-87
ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ...   327   8e-87
ref|XP_006473517.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ...   302   2e-79
ref|XP_006435011.1| hypothetical protein CICLE_v10000434mg [Citr...   301   3e-79
gb|EOY14790.1| Pentatricopeptide repeat-containing protein [Theo...   300   1e-78
ref|XP_002510403.1| pentatricopeptide repeat-containing protein,...   295   3e-77
gb|EMJ09250.1| hypothetical protein PRUPE_ppa002278mg [Prunus pe...   288   2e-75
gb|EXB32782.1| hypothetical protein L484_012512 [Morus notabilis]     288   4e-75
gb|EPS61939.1| hypothetical protein M569_12852, partial [Genlise...   278   3e-72
ref|XP_004303643.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ...   276   1e-71
ref|XP_006341261.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-69
ref|XP_003545276.1| PREDICTED: pentatricopeptide repeat-containi...   269   2e-69
ref|XP_002306873.2| hypothetical protein POPTR_0005s24980g [Popu...   268   3e-69
ref|XP_004499166.1| PREDICTED: pentatricopeptide repeat-containi...   267   8e-69
gb|ESW32741.1| hypothetical protein PHAVU_001G013700g [Phaseolus...   263   1e-67
ref|XP_003550383.1| PREDICTED: putative pentatricopeptide repeat...   261   3e-67
ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCL...   260   7e-67
ref|XP_004152774.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ...   260   7e-67
ref|XP_004242959.1| PREDICTED: putative pentatricopeptide repeat...   256   1e-65
ref|XP_006306884.1| hypothetical protein CARUB_v10008438mg [Caps...   247   6e-63

>emb|CBI19710.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score =  327 bits (837), Expect = 8e-87
 Identities = 179/336 (53%), Positives = 211/336 (62%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCVAXXXXXXTHLFHSSGAYHGSSFIDGHK 825
            M L+   S+ ++  +S+ NGR LS  +  YK         +H  +SSG+Y   S      
Sbjct: 1    MNLKHLLSRQTIKGLSRFNGRILSPYSYIYKDSFAITTPISHSIYSSGSY--DSTFQNLA 58

Query: 824  NPKFDKLFGRYIHTLQXXXXXXXXXXXXXXXXXXA--AMNEFLSRFVWVMRKKLVEAYPG 651
             PK      RY H+L                       MNEFLSRFVW+MR KL+E Y G
Sbjct: 59   YPKLAPSSNRYAHSLPETKLGGSGTDPELESDDSDDGTMNEFLSRFVWIMRGKLMEVYTG 118

Query: 650  CDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQDX 471
            CDK TIDGML++IV KVVSEMEKGGLEQM   A + PSQDFSEDLW+TVW+VSN+VL D 
Sbjct: 119  CDKQTIDGMLLIIVRKVVSEMEKGGLEQMLSAAVAAPSQDFSEDLWKTVWEVSNLVLDDM 178

Query: 470  XXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLERLX 291
                     K FLQSEEVKEM RFAGE+GIRGDMLRELRFKWAREKMEESEFYQSL+ L 
Sbjct: 179  KKARNKEKMKGFLQSEEVKEMSRFAGEIGIRGDMLRELRFKWAREKMEESEFYQSLDHLR 238

Query: 290  XXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSDPK 111
                           +                 ++K+VSLPKRHGKI+Y+IYGLDLSDPK
Sbjct: 239  EEAQAEEG------EEAVGNEEVIGDDLVEDEKKEKVVSLPKRHGKIRYEIYGLDLSDPK 292

Query: 110  WAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
            W EVADK+HE  E +WPQEPKPISGKCKLIT++IL+
Sbjct: 293  WTEVADKVHEREEIIWPQEPKPISGKCKLITEKILN 328


>ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
            [Vitis vinifera]
          Length = 720

 Score =  327 bits (837), Expect = 8e-87
 Identities = 179/336 (53%), Positives = 211/336 (62%), Gaps = 2/336 (0%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCVAXXXXXXTHLFHSSGAYHGSSFIDGHK 825
            M L+   S+ ++  +S+ NGR LS  +  YK         +H  +SSG+Y   S      
Sbjct: 1    MNLKHLLSRQTIKGLSRFNGRILSPYSYIYKDSFAITTPISHSIYSSGSY--DSTFQNLA 58

Query: 824  NPKFDKLFGRYIHTLQXXXXXXXXXXXXXXXXXXA--AMNEFLSRFVWVMRKKLVEAYPG 651
             PK      RY H+L                       MNEFLSRFVW+MR KL+E Y G
Sbjct: 59   YPKLAPSSNRYAHSLPETKLGGSGTDPELESDDSDDGTMNEFLSRFVWIMRGKLMEVYTG 118

Query: 650  CDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQDX 471
            CDK TIDGML++IV KVVSEMEKGGLEQM   A + PSQDFSEDLW+TVW+VSN+VL D 
Sbjct: 119  CDKQTIDGMLLIIVRKVVSEMEKGGLEQMLSAAVAAPSQDFSEDLWKTVWEVSNLVLDDM 178

Query: 470  XXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLERLX 291
                     K FLQSEEVKEM RFAGE+GIRGDMLRELRFKWAREKMEESEFYQSL+ L 
Sbjct: 179  KKARNKEKMKGFLQSEEVKEMSRFAGEIGIRGDMLRELRFKWAREKMEESEFYQSLDHLR 238

Query: 290  XXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSDPK 111
                           +                 ++K+VSLPKRHGKI+Y+IYGLDLSDPK
Sbjct: 239  EEAQAEEG------EEAVGNEEVIGDDLVEDEKKEKVVSLPKRHGKIRYEIYGLDLSDPK 292

Query: 110  WAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
            W EVADK+HE  E +WPQEPKPISGKCKLIT++IL+
Sbjct: 293  WTEVADKVHEREEIIWPQEPKPISGKCKLITEKILN 328


>ref|XP_006473517.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
           [Citrus sinensis]
          Length = 714

 Score =  302 bits (774), Expect = 2e-79
 Identities = 152/238 (63%), Positives = 179/238 (75%)
 Frame = -3

Query: 716 MNEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPS 537
           MNEFLSRFVW+MR K+ +AYP  DK TIDGML++IVGKVVSEMEKGGLE+M  +A++ PS
Sbjct: 93  MNEFLSRFVWIMRGKMSDAYPDSDKQTIDGMLLMIVGKVVSEMEKGGLERMIESASASPS 152

Query: 536 QDFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLREL 357
           QDFSEDLWRTVW+ SN+VL+D          K FLQS++VKEM RFAGE+GIRGDMLREL
Sbjct: 153 QDFSEDLWRTVWEASNLVLEDMEKARKKEKMKGFLQSDKVKEMSRFAGEIGIRGDMLREL 212

Query: 356 RFKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIV 177
           RFKWARE+MEESEFY+ LERL                K+                + K++
Sbjct: 213 RFKWAREEMEESEFYEGLERLRKEANAQ--------EKDEKAEGKAAAECAEVEEKPKVI 264

Query: 176 SLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
           +LPKRHGKIKYKIYGLDLSDPKW EVA+KIHE GE + P+EPKPI+GKCKLITD+ILS
Sbjct: 265 TLPKRHGKIKYKIYGLDLSDPKWTEVAEKIHERGEMILPEEPKPITGKCKLITDKILS 322


>ref|XP_006435011.1| hypothetical protein CICLE_v10000434mg [Citrus clementina]
           gi|557537133|gb|ESR48251.1| hypothetical protein
           CICLE_v10000434mg [Citrus clementina]
          Length = 714

 Score =  301 bits (772), Expect = 3e-79
 Identities = 156/245 (63%), Positives = 182/245 (74%), Gaps = 7/245 (2%)
 Frame = -3

Query: 716 MNEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPS 537
           MNEFLSRFVW+MR K+ +AYP  DK TIDGML++IVGKVVSEMEKGGLE+M  +A++ PS
Sbjct: 93  MNEFLSRFVWIMRGKMSDAYPDSDKKTIDGMLLMIVGKVVSEMEKGGLERMIESASASPS 152

Query: 536 QDFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLREL 357
           QDFSEDLWRTVW+VSN+VL+D          K FLQS++VKEM RFAGE+GIRGDMLREL
Sbjct: 153 QDFSEDLWRTVWEVSNLVLEDMEKARKKEKMKGFLQSDKVKEMSRFAGEIGIRGDMLREL 212

Query: 356 RFKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKET-------XXXXXXXXXXXXX 198
           RFKWARE+MEESEFY+ LER               LRKE                     
Sbjct: 213 RFKWAREEMEESEFYEGLER---------------LRKEANAQEMGEKAEGKAAAECAEV 257

Query: 197 XXEQKIVSLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLIT 18
             + K+++LPKRHGKIKYKIYGLDLSDPKWAEVA+KIHE GE + P+EPKPI+GKCKLIT
Sbjct: 258 EEKPKVITLPKRHGKIKYKIYGLDLSDPKWAEVAEKIHERGEMILPEEPKPITGKCKLIT 317

Query: 17  DQILS 3
           D+ILS
Sbjct: 318 DKILS 322


>gb|EOY14790.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
          Length = 712

 Score =  300 bits (767), Expect = 1e-78
 Identities = 169/339 (49%), Positives = 209/339 (61%), Gaps = 5/339 (1%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCVAXXXXXXTHLFHSSGAYHGSSFIDGHK 825
            M L+   S  ++  +SK+NG+ +S        +A       +   S      S+F+   K
Sbjct: 1    MNLKHLISGKTINNLSKINGKSISYNPKKLSTIAAARSPPLYSLSSG---QSSAFLRNRK 57

Query: 824  NPKFDKLFGRYIHTLQXXXXXXXXXXXXXXXXXXA-----AMNEFLSRFVWVMRKKLVEA 660
             P F   F RYIH+ Q                         +NEFLSRFVW+MR KL +A
Sbjct: 58   -PIFP--FIRYIHSTQETKLSYTGVEAKLVSSDSEEEEDGTVNEFLSRFVWIMRGKLSDA 114

Query: 659  YPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVL 480
            Y  C+K+TIDGML++IVGKVV EMEKGG++QM  +A +MPSQDFSEDLWRTVW+VSN+VL
Sbjct: 115  YRDCNKETIDGMLLIIVGKVVEEMEKGGIQQMLDSAVAMPSQDFSEDLWRTVWEVSNMVL 174

Query: 479  QDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLE 300
            +D          K FLQSEEVKEM RFA EVGI GD+LRELRFKWA EKMEE++FY+SLE
Sbjct: 175  EDMEKARKKEKVKQFLQSEEVKEMCRFASEVGIHGDLLRELRFKWAIEKMEENDFYRSLE 234

Query: 299  RLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLS 120
            RL                ++                EQ++VSLPKR GK+KYKIYGLDLS
Sbjct: 235  RLRD-------------EEQPKDGKTFDEQAVVAEDEQRVVSLPKRKGKLKYKIYGLDLS 281

Query: 119  DPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
            DPKWAEVADKIHE    +WPQEPK +SGKCKL+ ++ILS
Sbjct: 282  DPKWAEVADKIHEREAMVWPQEPKSLSGKCKLVMEKILS 320


>ref|XP_002510403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551104|gb|EEF52590.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  295 bits (755), Expect = 3e-77
 Identities = 172/343 (50%), Positives = 205/343 (59%), Gaps = 9/343 (2%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCVAXXXXXXTHLFHSSGAYHGSSFIDGH- 828
            M+L+   S+ ++  +S  N R LS   S             +   S+     S F  G  
Sbjct: 1    MSLKHLVSRRTINTVSGFNARILSLYPS-----------YVYRDFSTVTTSPSPFFSGRV 49

Query: 827  --KNPKFDK---LFGRYIHTLQXXXXXXXXXXXXXXXXXXAA---MNEFLSRFVWVMRKK 672
              +NPKF K    F RY+H++Q                       M+EFLSRFV+VMR K
Sbjct: 50   LLRNPKFLKHVFSFKRYLHSVQDIKLNELSFKPKFNCNDSEEDGNMSEFLSRFVYVMRGK 109

Query: 671  LVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVS 492
            L + Y  CDK TID ML++IVGKVVSEMEKG  EQM G + + PSQD SEDLWRTVW+VS
Sbjct: 110  LSDVYQDCDKQTIDSMLLIIVGKVVSEMEKGSPEQMLGASGAAPSQDLSEDLWRTVWEVS 169

Query: 491  NVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFY 312
            N+VL+D          K FLQSEEVKEM RFAGE+GIRGDMLRELRFKWA EKMEESEFY
Sbjct: 170  NLVLEDMEKERKKEKMKGFLQSEEVKEMCRFAGEIGIRGDMLRELRFKWAHEKMEESEFY 229

Query: 311  QSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYG 132
             SLE+L                 E                  K+ S+PKRHGKI+YKIYG
Sbjct: 230  ASLEKLREEERTQEKEEADAKNYEPMGEEAVMGEEKL-----KVKSIPKRHGKIRYKIYG 284

Query: 131  LDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
            LDLSDPKW EVADKIHE+G  +WPQEPKPI+GK KL+T++ILS
Sbjct: 285  LDLSDPKWVEVADKIHETGAIIWPQEPKPINGKSKLVTEKILS 327


>gb|EMJ09250.1| hypothetical protein PRUPE_ppa002278mg [Prunus persica]
          Length = 692

 Score =  288 bits (738), Expect = 2e-75
 Identities = 166/333 (49%), Positives = 201/333 (60%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCVAXXXXXXTHLFHSSGAYHGSSFIDGHK 825
            M LR   S+ +VT  SK++ R  S    G+  +A      +  FHS  +  GS  +   K
Sbjct: 1    MNLRHLVSRQAVTNASKISARLRSPYGHGFTTMAADPVPLS--FHSP-SQGGSKPLKNPK 57

Query: 824  NPKFDKLFGRYIHTLQXXXXXXXXXXXXXXXXXXAAMNEFLSRFVWVMRKKLVEAYPGCD 645
             PK    F RYIH+ Q                              +  +KL EAYP CD
Sbjct: 58   CPKPISSFNRYIHSAQAQVGDPK-----------------------IDSEKLNEAYPDCD 94

Query: 644  KDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQDXXX 465
            K+TIDGML++IV KVVSEMEKGG+EQM   + S P QDFSEDLW+TVW+VSN+VL+D   
Sbjct: 95   KETIDGMLMIIVQKVVSEMEKGGIEQMLSESQSTPLQDFSEDLWKTVWEVSNMVLEDMKK 154

Query: 464  XXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLERLXXX 285
                   K FLQ EEVKEM RFAGEVGIRGDMLRELRFKWAREKMEE+EFYQSLERL   
Sbjct: 155  EVKKEKMKGFLQEEEVKEMCRFAGEVGIRGDMLRELRFKWAREKMEETEFYQSLERLREE 214

Query: 284  XXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSDPKWA 105
                        ++E                + K+VSLPKR GKI+Y IYGLDLSD KW 
Sbjct: 215  DRKS--------QEEGEAAEGMQAETTGEEEKSKVVSLPKRRGKIRYNIYGLDLSDSKWV 266

Query: 104  EVADKIHESGEFMWPQEPKPISGKCKLITDQIL 6
            +VADKIHE+ E +WPQEPKPI+GKCKL+T++I+
Sbjct: 267  DVADKIHEAEEIIWPQEPKPITGKCKLVTERII 299


>gb|EXB32782.1| hypothetical protein L484_012512 [Morus notabilis]
          Length = 734

 Score =  288 bits (736), Expect = 4e-75
 Identities = 166/327 (50%), Positives = 197/327 (60%), Gaps = 4/327 (1%)
 Frame = -3

Query: 971 VTRISKLNGRGLS-SLASGYKCVAXXXXXXTHLFHSSGAYHGSSFIDGHKNPKFDKLFGR 795
           + +ISK+NGR  S S        A      T  FHSS  Y GS      +  K +  F R
Sbjct: 12  INKISKINGRLRSKSPYISENSFAMSAPVSTSSFHSSNTY-GSKPSQNPQCQKLNASFRR 70

Query: 794 YIHTLQXXXXXXXXXXXXXXXXXXA---AMNEFLSRFVWVMRKKLVEAYPGCDKDTIDGM 624
           YIH+ +                       MNEFLSRFVW+MR KL EA   CDK TIDGM
Sbjct: 71  YIHSTRLTKLSYVEDGLKLESDESDEDGTMNEFLSRFVWIMRGKLSEACGDCDKRTIDGM 130

Query: 623 LVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQDXXXXXXXXXX 444
           L++IV KVVSE+EKGG+EQM G+A S  SQDFSEDLW TVW+VSN+VL D          
Sbjct: 131 LLIIVEKVVSELEKGGVEQMLGSAMSSSSQDFSEDLWNTVWEVSNMVLDDMKKATKKEKM 190

Query: 443 KSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLERLXXXXXXXXXX 264
           K  LQ EEVKEM RFA E+GIRGDMLRE+RFKWAR+K+E+S+FY+ LER           
Sbjct: 191 KRVLQCEEVKEMVRFASEIGIRGDMLREMRFKWARQKIEKSDFYEGLERFRAEEK----- 245

Query: 263 XXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSDPKWAEVADKIH 84
                 +E                  K VSLPKR GKI+YKIYGLDLS PKW EVADK+H
Sbjct: 246 -----AREKAKATTDVEEGAVVEGRPKTVSLPKRRGKIRYKIYGLDLSGPKWTEVADKVH 300

Query: 83  ESGEFMWPQEPKPISGKCKLITDQILS 3
           E GE +WP+EPKPISGK KL+T++IL+
Sbjct: 301 EVGEMIWPEEPKPISGKSKLVTEKILA 327


>gb|EPS61939.1| hypothetical protein M569_12852, partial [Genlisea aurea]
          Length = 602

 Score =  278 bits (712), Expect = 3e-72
 Identities = 144/237 (60%), Positives = 170/237 (71%), Gaps = 1/237 (0%)
 Frame = -3

Query: 710 EFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGT-ATSMPSQ 534
           EFLSRFVW+MRK+LV+ YP  DK  IDGMLV+IV KVVSE+EKGG++Q+ G  A++  S 
Sbjct: 1   EFLSRFVWIMRKRLVDVYPDFDKKAIDGMLVIIVEKVVSEVEKGGMKQLAGDDASAAHST 60

Query: 533 DFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELR 354
           DFSEDLW+TVW+VSN VLQD          K+FL SE+VK+MYRFAGEVGIRGDMLRELR
Sbjct: 61  DFSEDLWKTVWEVSNQVLQDIEKEKKKEKMKTFLHSEDVKKMYRFAGEVGIRGDMLRELR 120

Query: 353 FKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVS 174
           FKWAREKMEE+EFY SLER+                 E                +   V+
Sbjct: 121 FKWAREKMEETEFYDSLERIRKEASEVDSQKREGFTNENAEFDGENEVGEERSMK---VT 177

Query: 173 LPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
           LPKRHG +KYKIYGLDLS PKWAEVADKIHE+ E +WP +PK ISGKCKL+T++ILS
Sbjct: 178 LPKRHGNLKYKIYGLDLSHPKWAEVADKIHENDEVIWPVQPKSISGKCKLVTEKILS 234


>ref|XP_004303643.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 703

 Score =  276 bits (706), Expect = 1e-71
 Identities = 147/274 (53%), Positives = 178/274 (64%)
 Frame = -3

Query: 827 KNPKFDKLFGRYIHTLQXXXXXXXXXXXXXXXXXXAAMNEFLSRFVWVMRKKLVEAYPGC 648
           +NP+    F R IH+ Q                    +NEFLSRFVW+MR+KL  AYPGC
Sbjct: 52  QNPRSPIPFNRGIHSAQVVDSVDSEEEDDG------GVNEFLSRFVWIMRQKLNVAYPGC 105

Query: 647 DKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQDXX 468
           DK+T+DGML++IV KVV EME  G E   G   +  S+DFSEDLW TVW+VSN+V+ D  
Sbjct: 106 DKETVDGMLMVIVQKVVEEMEGSGFEHKLGQRQAA-SEDFSEDLWTTVWEVSNMVMDDMH 164

Query: 467 XXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLERLXX 288
                   K FL +EEVKEM RFAGE+GIRGDMLRELRFKWAREKMEE+EFY+SLERL  
Sbjct: 165 KEAKKEKMKGFLHAEEVKEMCRFAGEIGIRGDMLRELRFKWAREKMEETEFYESLERLRE 224

Query: 287 XXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSDPKW 108
                      +  ++                  ++ SLPKR GKI+Y IYGLDLSDPKW
Sbjct: 225 QEKSQEKGEGGEAVQQA------EAEAGGTELNAEVASLPKRRGKIRYNIYGLDLSDPKW 278

Query: 107 AEVADKIHESGEFMWPQEPKPISGKCKLITDQIL 6
            EVADKIHE+GE +WP+ PKPISGKCKL+T++IL
Sbjct: 279 VEVADKIHEAGEVIWPKGPKPISGKCKLVTEKIL 312


>ref|XP_006341261.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 708

 Score =  270 bits (689), Expect = 1e-69
 Identities = 140/240 (58%), Positives = 171/240 (71%), Gaps = 2/240 (0%)
 Frame = -3

Query: 716 MNEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPS 537
           MN+FLSRFVW+MR KL+E YP  +K TID ML++IV KVVSE+EKGG +Q+ G  +S PS
Sbjct: 89  MNDFLSRFVWIMRGKLMEVYPDFEKKTIDEMLLVIVAKVVSELEKGGFDQIVGGKSSSPS 148

Query: 536 QD--FSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLR 363
           QD  FS DLW+TVW+VSNVVL+D          K+FLQ+E+VKEM RFAGEVGIRGDMLR
Sbjct: 149 QDDDFSHDLWKTVWEVSNVVLEDMEKAKRKDKMKNFLQAEQVKEMCRFAGEVGIRGDMLR 208

Query: 362 ELRFKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQK 183
           E RFKWAREKMEESEFY SLER               +  ++               + K
Sbjct: 209 EYRFKWAREKMEESEFYHSLERFKEEEQQGTEYGIGVVEHQS------------RAEDPK 256

Query: 182 IVSLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
           +V+LPKR GKI YKIYGLDLSD KW++VADKIHE+ + + PQEPK I GKCK+IT+++LS
Sbjct: 257 LVALPKRRGKINYKIYGLDLSDSKWSQVADKIHEAEKIICPQEPKKIDGKCKIITEKLLS 316


>ref|XP_003545276.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial-like [Glycine max]
          Length = 691

 Score =  269 bits (688), Expect = 2e-69
 Identities = 143/236 (60%), Positives = 166/236 (70%)
 Frame = -3

Query: 713 NEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQ 534
           NEFLSRFVW+MRKK+ EAYP  DK  +DGML  IV + VSEMEKGG+E M+    S  S 
Sbjct: 76  NEFLSRFVWIMRKKVNEAYPDSDKPAVDGMLFAIVERFVSEMEKGGIETMS----SFRSA 131

Query: 533 DFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELR 354
           DFSEDLWRTVW+VSN+VL+D          K FLQ EEVKEM RFAGEVGIRGD+LRELR
Sbjct: 132 DFSEDLWRTVWEVSNLVLEDMDKEIKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELR 191

Query: 353 FKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVS 174
           FKWAREK+EE EFY+ LER               LRKET               E+ +V 
Sbjct: 192 FKWAREKLEEHEFYEGLER---------------LRKET-QSEGNAIDVPKEEKEKVVVG 235

Query: 173 LPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQIL 6
           LPKR GKI+YKIYGLDLSDPKWA+VAD+IHE+ +  WPQEPKPI+GK K++T +IL
Sbjct: 236 LPKRRGKIRYKIYGLDLSDPKWAQVADRIHEAEQVFWPQEPKPITGKAKIVTTKIL 291


>ref|XP_002306873.2| hypothetical protein POPTR_0005s24980g [Populus trichocarpa]
           gi|550339692|gb|EEE93869.2| hypothetical protein
           POPTR_0005s24980g [Populus trichocarpa]
          Length = 715

 Score =  268 bits (685), Expect = 3e-69
 Identities = 135/237 (56%), Positives = 166/237 (70%)
 Frame = -3

Query: 716 MNEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPS 537
           MNEFLSRFVW+MR KL E Y   DK+TI+GML++IVG+VVSEMEKGGLEQM   + +  S
Sbjct: 92  MNEFLSRFVWIMRGKLTEVYKDSDKETINGMLLVIVGEVVSEMEKGGLEQMLDVSVATLS 151

Query: 536 QDFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLREL 357
           Q FS DLW+TVW+VSN VL D          K FLQ EEV+E+ RFA E+GIRGDM+R+ 
Sbjct: 152 QGFSRDLWKTVWEVSNAVLADMEKERKKEKMKGFLQCEEVQELCRFAAEIGIRGDMMRDF 211

Query: 356 RFKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIV 177
           RFKWAREKMEES+FY+ L+RL                +                 + K+V
Sbjct: 212 RFKWAREKMEESDFYEGLKRLREEVRAQEKAE----EEGKNAVAMGEEAAIMDEEKPKVV 267

Query: 176 SLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQIL 6
           +LP RHGKI YKIYGLDLS+PKWA+VAD+IHES +  WP+EPKPISGKCK++T++IL
Sbjct: 268 TLPMRHGKINYKIYGLDLSNPKWAKVADRIHESEKLDWPEEPKPISGKCKIVTEKIL 324


>ref|XP_004499166.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cicer arietinum]
          Length = 715

 Score =  267 bits (682), Expect = 8e-69
 Identities = 139/245 (56%), Positives = 165/245 (67%), Gaps = 8/245 (3%)
 Frame = -3

Query: 713 NEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQ 534
           NEFLSRF W+MRKK+ E+YP CDK T+DGML++IV +VVSEMEKG     T + +   S 
Sbjct: 80  NEFLSRFAWIMRKKVKESYPECDKTTVDGMLLVIVERVVSEMEKGAGAGSTASFSPFSSV 139

Query: 533 DFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELR 354
           DFSEDLWRTVW+VSN VL D          K FLQ +EVKEM RFAGEVGIRG++LRELR
Sbjct: 140 DFSEDLWRTVWEVSNKVLVDMNNERKKEKMKGFLQCDEVKEMCRFAGEVGIRGNLLRELR 199

Query: 353 FKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKET--------XXXXXXXXXXXXX 198
           FKWAREKMEE EFY+ LE+L                 ET                     
Sbjct: 200 FKWAREKMEEHEFYEGLEKLRKEGQVVVEEETKLDETETNVDLEPVNVDGVVEDNVHVEE 259

Query: 197 XXEQKIVSLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLIT 18
             E K+V LPKR GK+K+KIYGLDLSDPKW +VAD+IHE+GE +WP+E KPI+GKCK +T
Sbjct: 260 KGENKVVGLPKRRGKLKFKIYGLDLSDPKWEQVADRIHEAGEVLWPKEVKPITGKCKQVT 319

Query: 17  DQILS 3
           D+ILS
Sbjct: 320 DKILS 324


>gb|ESW32741.1| hypothetical protein PHAVU_001G013700g [Phaseolus vulgaris]
          Length = 682

 Score =  263 bits (671), Expect = 1e-67
 Identities = 141/237 (59%), Positives = 161/237 (67%)
 Frame = -3

Query: 713 NEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQ 534
           NEFLSRFVW+MRKK+ EAYP CDK T+DGMLV IV +V SEMEKGG  Q   +     S 
Sbjct: 77  NEFLSRFVWIMRKKVQEAYPECDKATVDGMLVAIVERVTSEMEKGGGVQTAASG----SG 132

Query: 533 DFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELR 354
           DFSEDLW TVW+VSN+VLQD          K FLQ EEVKEM RFAGEVGIRGD+LRELR
Sbjct: 133 DFSEDLWGTVWEVSNLVLQDMDKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELR 192

Query: 353 FKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVS 174
           FKWAREKMEE EFY+ LER+                K+                E+  V 
Sbjct: 193 FKWAREKMEEREFYEGLERI----------------KKEAQNEKERDVGEEGKKEKVDVG 236

Query: 173 LPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
           LPKR GKI+YKIYGLDLSDPKWA+VAD+IHE+ E  WPQEPK I+GK K++  +ILS
Sbjct: 237 LPKRKGKIRYKIYGLDLSDPKWAQVADRIHEAEEVFWPQEPKAITGKAKIVRSKILS 293


>ref|XP_003550383.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like isoform 1 [Glycine max]
          Length = 693

 Score =  261 bits (668), Expect = 3e-67
 Identities = 141/238 (59%), Positives = 165/238 (69%), Gaps = 1/238 (0%)
 Frame = -3

Query: 713 NEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSM-PS 537
           NEFLSRFVW+MRKK+ EAYP  DK T+DGMLV IV  VVSEMEKG +    GT +S+  S
Sbjct: 80  NEFLSRFVWIMRKKVKEAYPDSDKPTVDGMLVAIVEMVVSEMEKGSI----GTTSSLFCS 135

Query: 536 QDFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLREL 357
            DFSEDLWRTVW+VS++VL+D          KSFLQ EEVKEM RFAGEVGIRGD+LREL
Sbjct: 136 ADFSEDLWRTVWEVSSLVLEDMNKEIKKEKMKSFLQCEEVKEMCRFAGEVGIRGDLLREL 195

Query: 356 RFKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIV 177
           RFKWAREKMEE EFY+ LERL                K+                E+ +V
Sbjct: 196 RFKWAREKMEEHEFYEGLERLREEARSEGNGIGVITEKK------------EKVKEKVVV 243

Query: 176 SLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
            LPKR G I+YKIYGLDLSD KWA+VAD+IHE+ +  WPQEPKPI+GK K++  +ILS
Sbjct: 244 GLPKRRGNIRYKIYGLDLSDSKWAQVADRIHEAEQVFWPQEPKPITGKAKIVIAKILS 301


>ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 5,
            mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  260 bits (665), Expect = 7e-67
 Identities = 152/337 (45%), Positives = 191/337 (56%), Gaps = 4/337 (1%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCV-AXXXXXXTHLFHSSGAYHGSSFIDGH 828
            M+L+    + +    SK+NG  L   +                L  S   Y+ S      
Sbjct: 1    MSLKHLLLRQTRKNFSKINGNLLDRQSPNINATHIFITKPSFSLLDSHRGYYSSLAARNF 60

Query: 827  KNPKFDKLFGRYIH---TLQXXXXXXXXXXXXXXXXXXAAMNEFLSRFVWVMRKKLVEAY 657
            +  K + LF R IH   T                     +MNEFLSRFVW+MR+K+ E +
Sbjct: 61   ELSKLNSLFSRCIHFTVTKLSNAAIEPKPESAEVEDDDGSMNEFLSRFVWIMREKISEEF 120

Query: 656  PGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQ 477
            P  DK T++ ML++IV KVVSEMEKG  EQ    +T  P  D SEDLW+TV +VSN+VL 
Sbjct: 121  PDYDKQTVNAMLLMIVEKVVSEMEKGRFEQTLKASTDNPDWDLSEDLWKTVTEVSNMVLD 180

Query: 476  DXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLER 297
            D          K FL S EV+EM RFAGEVGIRGDMLRE RFKWAREKMEESEFY+SLE+
Sbjct: 181  DMKKATKKEKMKGFLLSREVQEMCRFAGEVGIRGDMLREFRFKWAREKMEESEFYESLEQ 240

Query: 296  LXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSD 117
            L             + R +                + + VSLPKR GK+KYKIYGLDLSD
Sbjct: 241  L-----------RKEARTQEENKDSASGAEAASEVKSEAVSLPKRRGKLKYKIYGLDLSD 289

Query: 116  PKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQIL 6
            PKW+E+ADK+H + + + PQEPKPISG CKL+T++IL
Sbjct: 290  PKWSELADKLHVAEKLILPQEPKPISGMCKLVTEKIL 326


>ref|XP_004152774.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
            [Cucumis sativus]
          Length = 717

 Score =  260 bits (665), Expect = 7e-67
 Identities = 152/337 (45%), Positives = 191/337 (56%), Gaps = 4/337 (1%)
 Frame = -3

Query: 1004 MTLRCFFSKHSVTRISKLNGRGLSSLASGYKCV-AXXXXXXTHLFHSSGAYHGSSFIDGH 828
            M+L+    + +    SK+NG  L   +                L  S   Y+ S      
Sbjct: 1    MSLKHLLLRQTRKNFSKINGNLLDRQSPNINATHIFITKPSFSLLDSHRGYYSSLAARNF 60

Query: 827  KNPKFDKLFGRYIH---TLQXXXXXXXXXXXXXXXXXXAAMNEFLSRFVWVMRKKLVEAY 657
            +  K + LF R IH   T                     +MNEFLSRFVW+MR+K+ E +
Sbjct: 61   ELSKLNSLFSRCIHFTVTKLSNAAIEPKPESAEVEDDDGSMNEFLSRFVWIMREKISEEF 120

Query: 656  PGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQDFSEDLWRTVWDVSNVVLQ 477
            P  DK T++ ML++IV KVVSEMEKG  EQ    +T  P  D SEDLW+TV +VSN+VL 
Sbjct: 121  PDYDKQTVNAMLLMIVEKVVSEMEKGRFEQTLKASTDNPDWDLSEDLWKTVTEVSNMVLD 180

Query: 476  DXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELRFKWAREKMEESEFYQSLER 297
            D          K FL S EV+EM RFAGEVGIRGDMLRE RFKWAREKMEESEFY+SLE+
Sbjct: 181  DMKKATKKEKMKGFLLSREVQEMCRFAGEVGIRGDMLREFRFKWAREKMEESEFYESLEQ 240

Query: 296  LXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVSLPKRHGKIKYKIYGLDLSD 117
            L             + R +                + + VSLPKR GK+KYKIYGLDLSD
Sbjct: 241  L-----------RKEARTQEENKDSASGAEAASEVKSEAVSLPKRRGKLKYKIYGLDLSD 289

Query: 116  PKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQIL 6
            PKW+E+ADK+H + + + PQEPKPISG CKL+T++IL
Sbjct: 290  PKWSELADKLHVAEKLILPQEPKPISGMCKLVTEKIL 326


>ref|XP_004242959.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Solanum lycopersicum]
          Length = 699

 Score =  256 bits (655), Expect = 1e-65
 Identities = 135/238 (56%), Positives = 164/238 (68%)
 Frame = -3

Query: 716 MNEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPS 537
           MN+FLSRFVW+MR KL + YP  +K TID ML++IV KVVSE+EKGG +Q+ G  +S   
Sbjct: 91  MNDFLSRFVWIMRGKLKQVYPDFEKKTIDEMLLVIVDKVVSELEKGGFDQIVGGKSS--D 148

Query: 536 QDFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLREL 357
            DFS DLW+TVW+VSNVVL+D          K+FLQ+E+VKEM RFAGEVGIRGDMLRE 
Sbjct: 149 DDFSHDLWKTVWEVSNVVLEDMEKAKRKDKMKNFLQAEQVKEMCRFAGEVGIRGDMLREY 208

Query: 356 RFKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIV 177
           RFKWAREKME SEFY SLER                  +                + K+V
Sbjct: 209 RFKWAREKMEASEFYHSLERF-----------------KEEEQQQQGTEHGIGAEDPKLV 251

Query: 176 SLPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
           +LPKR GKI YKIYGLDLSD KW++VADKIHE+ + + PQEPK I GKCK+IT+++LS
Sbjct: 252 TLPKRRGKINYKIYGLDLSDSKWSQVADKIHEAEKIICPQEPKKIDGKCKIITEKLLS 309


>ref|XP_006306884.1| hypothetical protein CARUB_v10008438mg [Capsella rubella]
           gi|482575595|gb|EOA39782.1| hypothetical protein
           CARUB_v10008438mg [Capsella rubella]
          Length = 723

 Score =  247 bits (631), Expect = 6e-63
 Identities = 128/237 (54%), Positives = 161/237 (67%)
 Frame = -3

Query: 713 NEFLSRFVWVMRKKLVEAYPGCDKDTIDGMLVLIVGKVVSEMEKGGLEQMTGTATSMPSQ 534
           NEFLSRFVW+MR K+ EAYP CDK  IDGML+LIV KVV E+E+GG  ++ G+A   PS 
Sbjct: 100 NEFLSRFVWIMRGKVSEAYPDCDKKMIDGMLLLIVEKVVEEIERGGFNKV-GSAPPSPSS 158

Query: 533 DFSEDLWRTVWDVSNVVLQDXXXXXXXXXXKSFLQSEEVKEMYRFAGEVGIRGDMLRELR 354
           +FS+DLW T+W+VSN VL+D          K ++QS EV EM RFAGE+GIRGD+LRELR
Sbjct: 159 EFSDDLWATIWEVSNTVLKDMEKERKKEKMKQYVQSPEVMEMCRFAGEIGIRGDLLRELR 218

Query: 353 FKWAREKMEESEFYQSLERLXXXXXXXXXXXXXQLRKETXXXXXXXXXXXXXXXEQKIVS 174
           FKWAREKME++EFY SLE+                  ET               E + +S
Sbjct: 219 FKWAREKMEDAEFYDSLEQ-------QRDLDNSIRESETVDGGEEEGSSASDEIESRSIS 271

Query: 173 LPKRHGKIKYKIYGLDLSDPKWAEVADKIHESGEFMWPQEPKPISGKCKLITDQILS 3
           LPKR GK KYKIYGL+LSDPKW +VADKIHE+ E    +EPKP++GKC+L+ +++ S
Sbjct: 272 LPKRKGKFKYKIYGLELSDPKWGQVADKIHEAEEEADWKEPKPVTGKCRLVMEKLES 328