BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00011506
         (318 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...    80   2e-13
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...    80   3e-13
sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding pro...    80   3e-13
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3...    80   4e-13
gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [...    80   4e-13
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...    80   4e-13
ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3...    79   5e-13
sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding pro...    79   6e-13
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3...    79   6e-13
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...    79   6e-13
gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyac...    79   6e-13
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein...    79   8e-13
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245...    79   8e-13
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3...    79   8e-13
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3...    79   8e-13
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3...    79   8e-13
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...    79   8e-13
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...    79   8e-13
gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [H...    79   8e-13
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...    78   1e-12

>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           V+MR T GK +P ++GSPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 32  VSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/75 (53%), Positives = 51/75 (68%)
 Frame = +3

Query: 93  AATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETAGSPWYGPDRVKYL 272
           A+T+    P  G     + +S++  G  +   VTMR T  K +P ++GSPWYGPDRVKYL
Sbjct: 3   ASTTALSSPFAGKAVKLSPSSSEVTGNGK---VTMRKTASKAKPVSSGSPWYGPDRVKYL 59

Query: 273 GPFSGEAPSYLTGEF 317
           GPFSGE+PSYLTGEF
Sbjct: 60  GPFSGESPSYLTGEF 74


>sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
           AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
           Precursor gi|170212|gb|AAA34056.1| chlorophyll
           a/b-binding protein-E [Nicotiana plumbaginifolia]
          Length = 266

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/75 (53%), Positives = 51/75 (68%)
 Frame = +3

Query: 93  AATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETAGSPWYGPDRVKYL 272
           A+T+    P  G     + +S++  G  +   VTMR T  K +P ++GSPWYGPDRVKYL
Sbjct: 3   ASTTALSSPFAGKAVKLSPSSSEVTGNGK---VTMRKTANKAKPVSSGSPWYGPDRVKYL 59

Query: 273 GPFSGEAPSYLTGEF 317
           GPFSGE+PSYLTGEF
Sbjct: 60  GPFSGESPSYLTGEF 74


>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           +TMR T  K +P ++GSPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 33  ITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 75


>gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [Sedum alfredii]
          Length = 267

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 44/78 (56%), Positives = 48/78 (61%)
 Frame = +3

Query: 84  ASMAATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETAGSPWYGPDRV 263
           AS  A S   L      TAS+ +     GR     VTMR T  K +P  + SPWYGPDRV
Sbjct: 3   ASTMALSSLSLAGQAVKTASSASEVFGSGR-----VTMRKTAAKPKPSASSSPWYGPDRV 57

Query: 264 KYLGPFSGEAPSYLTGEF 317
           KYLGPFSGEAPSYLTGEF
Sbjct: 58  KYLGPFSGEAPSYLTGEF 75


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           +TMR T GK +P ++GSPWYGPDRVKYLGPFSGE PSYLTGEF
Sbjct: 33  ITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 75


>ref|XP_006356074.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           VTMR T  K +P ++GSPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 33  VTMRKTTTKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 75


>sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
           AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
           Precursor gi|20471|emb|CAA26210.1| unnamed protein
           product [Petunia sp.]
          Length = 266

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 6/66 (9%)
 Frame = +3

Query: 138 ASNNNSNKSVGRP------RMTTVTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPS 299
           +S++ + K+V  P      R   VTMR T  K +P ++GSPWYGPDRVKYLGPFSGEAPS
Sbjct: 9   SSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPS 68

Query: 300 YLTGEF 317
           YLTGEF
Sbjct: 69  YLTGEF 74


>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           VTMR T  K +P ++GSPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 33  VTMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           VTMR T G+ +P ++GSPWYGPDRVKYLGPFSGE PSYLTGEF
Sbjct: 33  VTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 75


>gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
          Length = 239

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/82 (56%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
 Frame = +3

Query: 78  KMASMAATSFKGLPTLGAWTASNNNSNKSV--GRPRMTTVTMRATRGKKQPETAGSPWYG 251
           ++ SMA+T     P+L A TA     + SV  G  R T   MR T GK +  ++GSPWYG
Sbjct: 9   ELLSMASTMALSSPSL-AGTAVKLTPSSSVVSGDGRFT---MRKTAGKPKTVSSGSPWYG 64

Query: 252 PDRVKYLGPFSGEAPSYLTGEF 317
           P+RVKYLGPFSGEAPSYLTGEF
Sbjct: 65  PERVKYLGPFSGEAPSYLTGEF 86


>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           VTMR T  K +P ++GSPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 33  VTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75


>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
           lycopersicum]
          Length = 554

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           +TMR T  K +P ++GSPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +3

Query: 87  SMAATSFKGLPT---LGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETAGSPWYGPD 257
           S+ ATS   L +    G     + +S++  G  R   VTMR T  K +P ++GSPWYGPD
Sbjct: 286 SIMATSTMALSSSTFAGKAVKLSPSSSEITGNGR---VTMRKTATKAKPASSGSPWYGPD 342

Query: 258 RVKYLGPFSGEAPSYLTGEF 317
           RVKYLGPFSGE+PSYLTGEF
Sbjct: 343 RVKYLGPFSGESPSYLTGEF 362


>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 6 [Solanum lycopersicum]
          Length = 244

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           +TMR T  K +P ++GSPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75


>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 5 [Solanum lycopersicum]
          Length = 255

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           +TMR T  K +P ++GSPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75


>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform 1 [Solanum lycopersicum]
           gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 2
           [Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
           PREDICTED: chlorophyll a-b binding protein 3C,
           chloroplastic-like isoform 3 [Solanum lycopersicum]
           gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform 4
           [Solanum lycopersicum]
          Length = 267

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           +TMR T  K +P ++GSPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 33  ITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           VTMR T GK +  ++GSPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 33  VTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 75


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +3

Query: 189 VTMRATRGKKQPETAGSPWYGPDRVKYLGPFSGEAPSYLTGEF 317
           VTMR T GK +  ++GSPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 33  VTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 75


>gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
           orientalis]
          Length = 211

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 43/76 (56%), Positives = 49/76 (64%)
 Frame = +3

Query: 90  MAATSFKGLPTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETAGSPWYGPDRVKY 269
           MA+T     P+L A TA     + S G       TMR T  K +  ++GSPWYGPDRVKY
Sbjct: 1   MASTMALSSPSL-AGTAVKLTPSSSSGVSGDGRFTMRKTAAKPKTVSSGSPWYGPDRVKY 59

Query: 270 LGPFSGEAPSYLTGEF 317
           LGPFSGEAPSYLTGEF
Sbjct: 60  LGPFSGEAPSYLTGEF 75


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = +3

Query: 90  MAATSFKGL----PTLGAWTASNNNSNKSVGRPRMTTVTMRATRGKKQPETAGSPWYGPD 257
           MAA+S   +    PTL       N S++ +G  R T   MR +   K+  ++GSPWYGPD
Sbjct: 1   MAASSSSSMALSSPTLAGKQLKLNPSSQELGAARFT---MRKSATTKKVASSGSPWYGPD 57

Query: 258 RVKYLGPFSGEAPSYLTGEF 317
           RVKYLGPFSGE+PSYLTGEF
Sbjct: 58  RVKYLGPFSGESPSYLTGEF 77