BLASTX nr result

ID: Rehmannia22_contig00011269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00011269
         (511 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234661.1| PREDICTED: F-box protein SKIP2-like [Solanum...    62   6e-08
ref|XP_006343196.1| PREDICTED: F-box protein SKIP2-like [Solanum...    60   3e-07
emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]    59   7e-07

>ref|XP_004234661.1| PREDICTED: F-box protein SKIP2-like [Solanum lycopersicum]
          Length = 549

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +1

Query: 7   EIEPEALDASTSDGGAQEYGVEFPAIXXXXXXXXXXXXXXDIDTPSTSNGGR-LPNKSRF 183
           E++ E +D S SDGGA E G+EFPAI              DIDTPSTSN GR   + +R 
Sbjct: 466 EVDVEVVDGSASDGGALEEGIEFPAI-ARIVPILGAGGVVDIDTPSTSNFGRSSASNTRI 524

Query: 184 SLFAGRTLVACAFRR 228
               GR  VAC FRR
Sbjct: 525 GFLGGRGFVACTFRR 539


>ref|XP_006343196.1| PREDICTED: F-box protein SKIP2-like [Solanum tuberosum]
          Length = 549

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/75 (46%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +1

Query: 7   EIEPEALDASTSDGGAQEYGVEFPAIXXXXXXXXXXXXXXDIDTPSTSNGGRLPNK-SRF 183
           E++ E +D S SDGGA E G+EFP I              DIDTPST N GR  +  SR 
Sbjct: 466 EVDVEVVDGSASDGGALEEGIEFPPI-ARTVPILGAGGVVDIDTPSTGNFGRSSSSTSRI 524

Query: 184 SLFAGRTLVACAFRR 228
               GR  VAC FRR
Sbjct: 525 GFLGGRGFVACTFRR 539


>emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]
          Length = 1151

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/75 (49%), Positives = 41/75 (54%)
 Frame = +1

Query: 4   DEIEPEALDASTSDGGAQEYGVEFPAIXXXXXXXXXXXXXXDIDTPSTSNGGRLPNKSRF 183
           D +  E LDASTSDGGAQE G E P +               +D PS SNG     KS+F
Sbjct: 486 DAVAVETLDASTSDGGAQEDGQEPPPMVSQVTV---------VDGPSGSNGLSALFKSKF 536

Query: 184 SLFAGRTLVACAFRR 228
             FAGR LVACAF R
Sbjct: 537 GHFAGRNLVACAFGR 551


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