BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00011177
         (604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   161   1e-37
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   161   1e-37
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   151   1e-34
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   141   1e-31
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom...   139   5e-31
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise...   139   6e-31
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr...   135   1e-29
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   135   1e-29
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr...   135   1e-29
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr...   135   1e-29
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   133   3e-29
ref|XP_006450755.1| hypothetical protein CICLE_v10007968mg [Citr...   126   4e-27
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe...   123   3e-26
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-...   115   9e-24
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   112   8e-23
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   110   4e-22
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...   107   3e-21
emb|CAD20832.1| sigma factor [Spinacia oleracea]                      106   6e-21
ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-...   105   1e-20
ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago trun...   102   8e-20

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  161 bits (408), Expect = 1e-37
 Identities = 95/199 (47%), Positives = 125/199 (62%)
 Frame = -1

Query: 601 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 422
           +GK S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN V
Sbjct: 89  IGKCSHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMV 147

Query: 421 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 242
           RLERDI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV 
Sbjct: 148 RLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVV 207

Query: 241 IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 62
           ++SG                  IY   L S TI +   +P   +  RT  SR KR   A+
Sbjct: 208 VRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 267

Query: 61  NEAEMSTGVKMVAELEKLR 5
           NEAEMS GVK+VA LE++R
Sbjct: 268 NEAEMSKGVKLVANLERIR 286


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  161 bits (408), Expect = 1e-37
 Identities = 95/199 (47%), Positives = 125/199 (62%)
 Frame = -1

Query: 601 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 422
           +GK S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN V
Sbjct: 139 IGKCSHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMV 197

Query: 421 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 242
           RLERDI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV 
Sbjct: 198 RLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVV 257

Query: 241 IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 62
           ++SG                  IY   L S TI +   +P   +  RT  SR KR   A+
Sbjct: 258 VRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 317

Query: 61  NEAEMSTGVKMVAELEKLR 5
           NEAEMS GVK+VA LE++R
Sbjct: 318 NEAEMSKGVKLVANLERIR 336


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           tuberosum]
          Length = 555

 Score =  151 bits (382), Expect = 1e-34
 Identities = 90/200 (45%), Positives = 122/200 (61%), Gaps = 1/200 (0%)
 Frame = -1

Query: 598 GKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 422
           G+GS   +Y  +  + I  S + +K  YL +   T++  F LLMKNLD+LE+MF+DS   
Sbjct: 86  GRGSPSNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMS 142

Query: 421 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 242
           RLERDIL QLE+LGAL  FH+CLSRT  SS    + + P E+++E   +D V N + KV 
Sbjct: 143 RLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVV 202

Query: 241 IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 62
           ++S                 + I   +  +  I  D QQPKF S  RT  SRNKRQKIA+
Sbjct: 203 VRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAK 262

Query: 61  NEAEMSTGVKMVAELEKLRT 2
           NEAEMS GVK+VA+LE++R+
Sbjct: 263 NEAEMSRGVKLVAQLERIRS 282


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           lycopersicum]
          Length = 551

 Score =  141 bits (356), Expect = 1e-31
 Identities = 81/171 (47%), Positives = 106/171 (61%)
 Frame = -1

Query: 514 TSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKS 335
           T L  T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  S
Sbjct: 108 TYLNTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS 167

Query: 334 SDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELS 155
           S    + + P E+++E   +D V N + KV ++S                 + I   +  
Sbjct: 168 SSFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 227

Query: 154 SDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRT 2
           +  I  D QQ KF S  RT  SR KRQKIA+NEAEMS GVK+VA+LE++R+
Sbjct: 228 TKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRS 278


>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
          Length = 848

 Score =  139 bits (351), Expect = 5e-31
 Identities = 88/201 (43%), Positives = 122/201 (60%), Gaps = 1/201 (0%)
 Frame = -1

Query: 601 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 425
           +GKGS    +SL   D        DK +  TS QA +AS + LLM+NLD+LE+ F+DS+ 
Sbjct: 375 IGKGSQAHSHSLTMIDKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDV 434

Query: 424 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 245
           + LER+IL QL R GAL+LF++CLSRTLK+S+ +DLS+ P     +  +N SVD     +
Sbjct: 435 LTLEREILLQLGRFGALKLFNTCLSRTLKASNILDLSDVPAN-SGDCNMNLSVDGQKDNI 493

Query: 244 FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 65
            + S                 + I  Q + S+T+   FQ+PK  S  R S SR++R +IA
Sbjct: 494 VVCSRKKKQRKKIRERALENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIA 553

Query: 64  RNEAEMSTGVKMVAELEKLRT 2
           RNEAEMS GVK+VA LE++RT
Sbjct: 554 RNEAEMSKGVKVVANLERIRT 574


>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
          Length = 463

 Score =  139 bits (350), Expect = 6e-31
 Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
 Frame = -1

Query: 595 KGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRL 416
           K SSD  Y   D  I    N+D + Y +S  A + S+F LLMKNLD LE+MFSDS AVRL
Sbjct: 8   KESSDDAY---DRSIGIPKNEDDMTYFSSSNAVKTSRFVLLMKNLDTLENMFSDSYAVRL 64

Query: 415 ERDILEQLERLGALRLFHSCLSRTLKSSDSID-LSNAPVEIVEERRVNDSVDNHVSKVFI 239
           E DILEQL+RLGA+ LF+SCLS TL+S+++ D  S+AP +++ +      +D+   KV +
Sbjct: 65  EDDILEQLQRLGAIHLFNSCLSTTLRSAETFDSSSHAPADVLRK------IDSANCKVIV 118

Query: 238 QSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARN 59
           QSG                +     + +S  + ++F+ PK  S    +RSR K+Q+I ++
Sbjct: 119 QSGKKELRKLRRKRAVDFEAGNLSLQFTSRDVRKNFRTPKTDSARAVARSRYKKQRITQS 178

Query: 58  EAEMSTGVKMVAELEKLR 5
           E++M+ G K+V ELE++R
Sbjct: 179 ESDMAAGFKLVTELERIR 196


>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553990|gb|ESR64004.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score =  135 bits (339), Expect = 1e-29
 Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
 Frame = -1

Query: 565 LDNDI-QTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLE 389
           ++ND  +T   + K        A+  S F+LLM+NLD+LE  F+DS+A+RLER+IL+QL 
Sbjct: 75  VENDYSETEEIRQKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLG 134

Query: 388 RLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXX 209
           +LGAL+LF+S LSR +K+S+ +DLS+      EE+++NDS D H+ K+ + S        
Sbjct: 135 KLGALKLFNSHLSRIVKTSNVLDLSDVH---TEEQKMNDSRDYHMGKILVPSKRKGKRKL 191

Query: 208 XXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKM 29
                        L  L S+ +    +QP   SP R   SR +R  IARNEAEMS GV++
Sbjct: 192 KTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQV 251

Query: 28  VAELEKLRT 2
           VA LE+++T
Sbjct: 252 VANLERIKT 260


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553989|gb|ESR64003.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  135 bits (339), Expect = 1e-29
 Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
 Frame = -1

Query: 565 LDNDI-QTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLE 389
           ++ND  +T   + K        A+  S F+LLM+NLD+LE  F+DS+A+RLER+IL+QL 
Sbjct: 75  VENDYSETEEIRQKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLG 134

Query: 388 RLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXX 209
           +LGAL+LF+S LSR +K+S+ +DLS+      EE+++NDS D H+ K+ + S        
Sbjct: 135 KLGALKLFNSHLSRIVKTSNVLDLSDVH---TEEQKMNDSRDYHMGKILVPSKRKGKRKL 191

Query: 208 XXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKM 29
                        L  L S+ +    +QP   SP R   SR +R  IARNEAEMS GV++
Sbjct: 192 KTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQV 251

Query: 28  VAELEKLRT 2
           VA LE+++T
Sbjct: 252 VANLERIKT 260


>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917506|ref|XP_006450759.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553984|gb|ESR63998.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553985|gb|ESR63999.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 383

 Score =  135 bits (339), Expect = 1e-29
 Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
 Frame = -1

Query: 565 LDNDI-QTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLE 389
           ++ND  +T   + K        A+  S F+LLM+NLD+LE  F+DS+A+RLER+IL+QL 
Sbjct: 75  VENDYSETEEIRQKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLG 134

Query: 388 RLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXX 209
           +LGAL+LF+S LSR +K+S+ +DLS+      EE+++NDS D H+ K+ + S        
Sbjct: 135 KLGALKLFNSHLSRIVKTSNVLDLSDVH---TEEQKMNDSRDYHMGKILVPSKRKGKRKL 191

Query: 208 XXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKM 29
                        L  L S+ +    +QP   SP R   SR +R  IARNEAEMS GV++
Sbjct: 192 KTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQV 251

Query: 28  VAELEKLRT 2
           VA LE+++T
Sbjct: 252 VANLERIKT 260


>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917512|ref|XP_006450762.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553983|gb|ESR63997.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553988|gb|ESR64002.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 381

 Score =  135 bits (339), Expect = 1e-29
 Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
 Frame = -1

Query: 565 LDNDI-QTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLE 389
           ++ND  +T   + K        A+  S F+LLM+NLD+LE  F+DS+A+RLER+IL+QL 
Sbjct: 75  VENDYSETEEIRQKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLG 134

Query: 388 RLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXX 209
           +LGAL+LF+S LSR +K+S+ +DLS+      EE+++NDS D H+ K+ + S        
Sbjct: 135 KLGALKLFNSHLSRIVKTSNVLDLSDVH---TEEQKMNDSRDYHMGKILVPSKRKGKRKL 191

Query: 208 XXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKM 29
                        L  L S+ +    +QP   SP R   SR +R  IARNEAEMS GV++
Sbjct: 192 KTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQV 251

Query: 28  VAELEKLRT 2
           VA LE+++T
Sbjct: 252 VANLERIKT 260


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  133 bits (335), Expect = 3e-29
 Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
 Frame = -1

Query: 565 LDNDI-QTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLE 389
           ++ND  +T   + K        A+  S F+LLM+NLD+LE  F+DS+A+RLER+IL+QL 
Sbjct: 75  VENDYSETEEIRQKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLG 134

Query: 388 RLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXX 209
           +LGAL+LF+S LSR +K+S+ +DLS+      EE++++DS D H+ K+ + S        
Sbjct: 135 KLGALKLFNSHLSRIVKTSNVLDLSDVH---TEEQKMDDSRDYHMGKILVPSKRKGKRKL 191

Query: 208 XXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKM 29
                       YL  L S+ +    +QP   S  R   SR +R  IARNEAEMS GV++
Sbjct: 192 KTARVSEESIETYLLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQV 251

Query: 28  VAELEKLRT 2
           VA LE+++T
Sbjct: 252 VANLERIKT 260


>ref|XP_006450755.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917500|ref|XP_006450756.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|567917508|ref|XP_006450760.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|567917510|ref|XP_006450761.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553981|gb|ESR63995.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553982|gb|ESR63996.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553986|gb|ESR64000.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553987|gb|ESR64001.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 286

 Score =  126 bits (317), Expect = 4e-27
 Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 1/187 (0%)
 Frame = -1

Query: 565 LDNDI-QTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLE 389
           ++ND  +T   + K        A+  S F+LLM+NLD+LE  F+DS+A+RLER+IL+QL 
Sbjct: 75  VENDYSETEEIRQKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLEREILQQLG 134

Query: 388 RLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXX 209
           +LGAL+LF+S LSR +K+S+ +DLS+      EE+++NDS D H+ K+ + S        
Sbjct: 135 KLGALKLFNSHLSRIVKTSNVLDLSDVH---TEEQKMNDSRDYHMGKILVPSKRKGKRKL 191

Query: 208 XXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKM 29
                        L  L S+ +    +QP   SP R   SR +R  IARNEAEMS GV++
Sbjct: 192 KTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQV 251

Query: 28  VAELEKL 8
           V   +++
Sbjct: 252 VFNFKEI 258


>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  123 bits (309), Expect = 3e-26
 Identities = 73/191 (38%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
 Frame = -1

Query: 571 SLLDNDIQTSNNKDKLAYLTS--LQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILE 398
           S  DN +  +  K    +++S  L+A  AS F LL++NL++LE+ F+ S+ ++LE++IL 
Sbjct: 96  SFSDNQMPVAEGK----FISSKGLEACTASHFSLLLQNLNVLEETFATSDVLKLEKEILL 151

Query: 397 QLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXX 218
           QL RLGAL+LF  CLSRTLK+S  +DLS+ P   VEE ++    DN+V ++ ++SG    
Sbjct: 152 QLARLGALKLFDICLSRTLKTSSFLDLSDIPTVPVEEGKMERKEDNNVGEIIVRSG--KK 209

Query: 217 XXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTG 38
                       + +    L   TI +  ++P   S  R S  R++R  I++NEAEMS G
Sbjct: 210 EERRSRKRTSDNAIVSSNSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIG 269

Query: 37  VKMVAELEKLR 5
           VK++A+LE+++
Sbjct: 270 VKVIADLERIK 280


>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
           gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
           polymerase sigma factor sigC-like [Cucumis sativus]
          Length = 559

 Score =  115 bits (288), Expect = 9e-24
 Identities = 68/180 (37%), Positives = 100/180 (55%)
 Frame = -1

Query: 544 SNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLF 365
           S  +D  +  TSL   +AS F +LM+NLD+LE+ F++S  + LERDI+ QL +LGAL  F
Sbjct: 107 SKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFF 166

Query: 364 HSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXX 185
           ++CLSRTLK+S   D S  P+E  E+  VN   ++    V + S                
Sbjct: 167 NTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDN 226

Query: 184 XSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLR 5
              I  + L++  +     +    S  ++S S  +R  +A NEAEMSTGVK+VA LE++R
Sbjct: 227 ADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIR 286


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  112 bits (280), Expect = 8e-23
 Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
 Frame = -1

Query: 598 GKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVR 419
           GK S  GL  + D ++     K+ +    S    + S+F LL++NL+ILE  F+DS+A +
Sbjct: 90  GKRSHFGLNIIGDAEVSL---KEDIFVSPSSTKERTSRFSLLLENLNILEQSFADSDASK 146

Query: 418 LERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVN-DSVDNHVSKVF 242
           LE DIL QL +LGAL+LF++CL+RTL++++ +++S+   EI+ E  +N  S++N +  V 
Sbjct: 147 LEEDILLQLGKLGALKLFNTCLTRTLETTNVLEVSDVHTEIIGECNINGTSINNQIKVVV 206

Query: 241 IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 62
             +                        L S  I    ++P   S  + S+S+++R  IAR
Sbjct: 207 HTAKKEERKSRRERASARKGHKSPSLPLPSRPIQSGSEKPTVSSGKKASKSKSRRLIIAR 266

Query: 61  NEAEMSTGVKMVAELEKLRT 2
           NEAEM+ G+K++A+LEK+RT
Sbjct: 267 NEAEMARGIKVLADLEKIRT 286


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  110 bits (274), Expect = 4e-22
 Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
 Frame = -1

Query: 595 KGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRL 416
           K S   + +++ ND + S  ++     T L+    S+   L+ NLD LE + +D +A++L
Sbjct: 90  KTSHVSINNMMGND-KVSVEEEISTSHTRLRERMTSRISFLLDNLDTLEKLVADLDALKL 148

Query: 415 ERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQ 236
           ERDIL QL RLGAL  F++CLSRTL++S+ +DLS  P E   E + +  + +   K  ++
Sbjct: 149 ERDILLQLGRLGALEFFNACLSRTLQTSNVLDLSAVPTENTGESKTDGMLGDLTGKTVVR 208

Query: 235 SGXXXXXXXXXXXXXXXXSAIYLQ-ELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARN 59
           +G                        L S T+  +  +P FV   RTS S ++R  IARN
Sbjct: 209 TGKKEERKFRRERAASDNGKKTTSLSLPSKTVQNNLPKPTFVK--RTSSSSSRRSLIARN 266

Query: 58  EAEMSTGVKMVAELEKLRT 2
           EA+M+ GVK+ ++LE++RT
Sbjct: 267 EAKMTRGVKVASDLERIRT 285


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score =  107 bits (267), Expect = 3e-21
 Identities = 66/176 (37%), Positives = 99/176 (56%)
 Frame = -1

Query: 532 DKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCL 353
           DK     S    + S + LL++NL++LE+ F+DS   +LE++IL QL RLGAL+LF  CL
Sbjct: 103 DKEYSFMSSAGLRTSHYTLLLQNLNVLEETFADSGVSKLEKEILLQLGRLGALKLFEICL 162

Query: 352 SRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAI 173
           SRTLK+S  +DLS+ P E +E+ +          K  ++SG                   
Sbjct: 163 SRTLKTSSFLDLSDIPTEPIEKHKTE-------RKNIVRSGKKEEQKSRKRTSYDSKK-- 213

Query: 172 YLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLR 5
           +   L    +   F++P   S  R S SR++R  +A+NEAEMS GVK++A+LE+L+
Sbjct: 214 FSGTLPVKQMREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLK 269


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score =  106 bits (264), Expect = 6e-21
 Identities = 67/187 (35%), Positives = 104/187 (55%)
 Frame = -1

Query: 565 LDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLER 386
           L +D +  +++D   Y+ S+Q+  AS F  LM N+++LE+  SDS  ++LE+DIL QL R
Sbjct: 95  LISDTEVLSDRDVSVYVRSVQSCSASHFHTLMANINLLENKVSDSELLKLEKDILVQLGR 154

Query: 385 LGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXX 206
           LGAL+LFH+CLSR       ID+S+ P  I E+ + N   DN + K  + S         
Sbjct: 155 LGALQLFHACLSRI------IDMSDLPGLITEDGKANVRKDNELKKKLVFSKRKEERKLR 208

Query: 205 XXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMV 26
                   ++      S  +I          +  +T ++R +R  IA+NEAEMS G+K+V
Sbjct: 209 QERRLQASTSKRCACKSESSIESSIHHVVSTAAKKT-KARGRRAIIAKNEAEMSRGIKVV 267

Query: 25  AELEKLR 5
           A+LEK++
Sbjct: 268 AQLEKVK 274


>ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cicer arietinum]
          Length = 545

 Score =  105 bits (261), Expect = 1e-20
 Identities = 62/161 (38%), Positives = 95/161 (59%)
 Frame = -1

Query: 484 FKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAP 305
           F LLM+NL ILE+ F+DS A+RLE+DI+ +LE+LGAL LF+ CL+R+  +S   + ++  
Sbjct: 113 FGLLMENLGILEETFADSEAMRLEKDIVLKLEKLGALELFNVCLTRSFGTSTESNCTDVV 172

Query: 304 VEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQ 125
           +E V+E++ N  VDN+  KV +QS                 ++     L  +      + 
Sbjct: 173 LEHVKEKKRNFKVDNYTGKVVVQSKRKENRTRRKQASVAITTSFQSLPLEDNNQEGPLRL 232

Query: 124 PKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRT 2
           P  +   R S + N+R  IA+ E EMS GVK++AELEK++T
Sbjct: 233 PASLVK-RVSNTNNRRAVIAQREVEMSKGVKVLAELEKMKT 272


>ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago truncatula]
           gi|355477497|gb|AES58700.1| RNA polymerase sigma-B
           factor [Medicago truncatula]
          Length = 549

 Score =  102 bits (254), Expect = 8e-20
 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 6/171 (3%)
 Frame = -1

Query: 496 QASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDL 317
           + S F LLM+NL +LE+ F+DS A+RLE++I+ QLE+LGAL LF+ CL+ +  +S   + 
Sbjct: 117 EESHFGLLMENLGVLEETFADSEALRLEKNIILQLEKLGALELFNVCLTTSFGTSCISNC 176

Query: 316 SNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISR 137
           ++  +E VEE + N  VD++  KV + S                         SS ++  
Sbjct: 177 THKVLEQVEENKRNHKVDDYTGKVIVHSSKRKENRRRKRGSVSIAP-------SSRSLPL 229

Query: 136 DFQQ--PKFVSPI----RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRT 2
           D  Q  P   SP     R S ++NKR  IA+ E EMS GVK++AELEK+RT
Sbjct: 230 DDNQEDPLRSSPASFVKRASNTKNKRAVIAQREVEMSKGVKVLAELEKIRT 280