BLASTX nr result
ID: Rehmannia22_contig00011114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00011114
(406 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK29467.1| polyprotein-like [Solanum chilense] 113 2e-23
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 112 7e-23
ref|XP_002333859.1| predicted protein [Populus trichocarpa] 109 3e-22
ref|XP_002314389.1| predicted protein [Populus trichocarpa] 108 6e-22
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera] 103 2e-20
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 103 2e-20
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 102 5e-20
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 100 2e-19
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 100 3e-19
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] 100 3e-19
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] 98 1e-18
emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera] 98 1e-18
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 96 5e-18
emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera] 96 7e-18
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 92 7e-17
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 91 2e-16
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 89 5e-16
emb|CAN80131.1| hypothetical protein VITISV_012432 [Vitis vinifera] 88 1e-15
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 88 1e-15
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 87 2e-15
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 113 bits (283), Expect = 2e-23
Identities = 54/129 (41%), Positives = 86/129 (66%)
Frame = -1
Query: 388 RDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVF 209
R K K SKS+ R CY C++PGH +DC K+ +G+ + QK N+++T+A V
Sbjct: 219 RGKSKVRSKSK-ARNCYNCDQPGHFKRDCPNPKRGKGES--SGQK-----NDDNTAAMVQ 270
Query: 208 PDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNK 29
+ DVV+L +E+ C+H+A +++ WV+D+AAS+HATP ++ F Y GD+G VK GN +
Sbjct: 271 NNDDVVLLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSY 330
Query: 28 ARIVGVGDV 2
++I G+GD+
Sbjct: 331 SKIAGIGDI 339
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 112 bits (279), Expect = 7e-23
Identities = 54/129 (41%), Positives = 84/129 (65%)
Frame = -1
Query: 388 RDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVF 209
R K K SKSR R CY CN+PGH +DC ++ +G+ + QK N+++T+A V
Sbjct: 218 RGKSKNRSKSR-VRNCYNCNQPGHFKRDCPNPRKGKGET--SGQK-----NDDNTAAMVQ 269
Query: 208 PDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNK 29
+ +VV+ +E+ C+H++ ++ WV+D+AAS HATP ++ F Y GDFGTVK GN +
Sbjct: 270 NNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSY 329
Query: 28 ARIVGVGDV 2
++I G+GD+
Sbjct: 330 SKIAGIGDI 338
>ref|XP_002333859.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 109 bits (273), Expect = 3e-22
Identities = 54/121 (44%), Positives = 77/121 (63%)
Frame = -1
Query: 382 KGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVFPD 203
K +G S+SR KCYYC+KPGH+ KDC K K+D+ + + D + E T+A VF D
Sbjct: 94 KPRGRSQSRKGFKCYYCDKPGHMQKDCRKYKRDKKGRDE------DKNEENGTAAVVF-D 146
Query: 202 GDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNKAR 23
GDV ++ + C+++A D WV DSAAS+H TP ++F+++Y GDFG V+ GN N
Sbjct: 147 GDVAIVCDD--GCVNLACQDTTWVADSAASYHVTPRRDFYTSYTAGDFGQVRMGNCNVLN 204
Query: 22 I 20
I
Sbjct: 205 I 205
>ref|XP_002314389.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 108 bits (271), Expect = 6e-22
Identities = 53/124 (42%), Positives = 80/124 (64%)
Frame = -1
Query: 382 KGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVFPD 203
K +G S+SR K YYC+KPGH+ KDC K K+D+ + + D + E T+A VF D
Sbjct: 227 KPRGRSQSRKGFKRYYCDKPGHIQKDCRKYKRDKKGRDE------DKNEENGTAAVVF-D 279
Query: 202 GDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNKAR 23
GDV ++ + +C+++A D WV DSAAS+H TP ++F+++Y DFG V+ GN + A
Sbjct: 280 GDVAIVCDD--SCVNLACQDTTWVADSAASYHVTPRRDFYTSYTACDFGQVRMGNQSMAN 337
Query: 22 IVGV 11
+VG+
Sbjct: 338 VVGI 341
>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 103 bits (258), Expect = 2e-20
Identities = 50/128 (39%), Positives = 77/128 (60%)
Frame = -1
Query: 385 DKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVFP 206
DK +G SKS+ KC YC+KPGH+ ++C K K+++ +K QK ++ A V
Sbjct: 86 DKSRGKSKSQKDIKCLYCDKPGHIKRECRKFKREQFKRKGEEQK------DDKDIAAVAS 139
Query: 205 DGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNKA 26
+GD + + + C+++A D+ WV+D+ SFH T ++FFS+Y G FG VK GN K
Sbjct: 140 NGDTINIVCDDA-CVNLACQDSTWVVDTTTSFHITARRDFFSSYTSGSFGWVKMGNEAKC 198
Query: 25 RIVGVGDV 2
I+G+ DV
Sbjct: 199 EIIGMRDV 206
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 103 bits (257), Expect = 2e-20
Identities = 52/131 (39%), Positives = 76/131 (58%)
Frame = -1
Query: 394 NDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSAT 215
++RDK +G S +C+YC K GH+ + C +Q + DQKK KKV + D
Sbjct: 213 SNRDKSRGKSNKFANVECHYCKKKGHIKRFC---RQFQNDQKKNKGKKVKPEESSDDETN 269
Query: 214 VFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNN 35
F + +VV + +++ + + WVIDS A+ HATP +E FS+Y +GDFG VK GN
Sbjct: 270 SFGEFNVVY----DDDIINLTTQEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNA 325
Query: 34 NKARIVGVGDV 2
N + +VG GDV
Sbjct: 326 NFSTVVGKGDV 336
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 102 bits (254), Expect = 5e-20
Identities = 52/130 (40%), Positives = 79/130 (60%)
Frame = -1
Query: 391 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 212
+RD+ K + +C+YC+ GH+ K C + K+D Q K +KK D+ E+D AT
Sbjct: 78 NRDRSKSKTNKXANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKNDNGGEDDQVATT 136
Query: 211 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 32
D +V S + ++ A + +WVIDS AS HATP K+FF++Y GDFG+V+ GN+
Sbjct: 137 TSDFLIVYDS----DVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDG 192
Query: 31 KARIVGVGDV 2
A+ +G+GDV
Sbjct: 193 SAKAIGMGDV 202
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 100 bits (249), Expect = 2e-19
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Frame = -1
Query: 376 KGGSKSRDPR---------------KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDS 242
KG SKSR P+ +C+YC+ GH+ K C + K+D Q K +KK D+
Sbjct: 181 KGKSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKNDN 239
Query: 241 DNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGD 62
E+D AT D +V S + ++ A + +WVIDS AS HATP K+FF++Y GD
Sbjct: 240 GGEDDQVATTTSDFLIVYDS----DVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGD 295
Query: 61 FGTVKFGNNNKARIVGVGD 5
FG+V+ GN+ A+ +G+GD
Sbjct: 296 FGSVRMGNDGSAKAIGMGD 314
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 100 bits (248), Expect = 3e-19
Identities = 51/130 (39%), Positives = 78/130 (60%)
Frame = -1
Query: 391 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 212
+RD+ K + +C+YC+ GH+ K C + K+D Q K +KK D+ E+D AT
Sbjct: 191 NRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKNDNGGEDDQVATT 249
Query: 211 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 32
D +V S + ++ A ++ WVID AS HATP K+FF++Y GDFG+V+ GN+
Sbjct: 250 ISDFLIVYDS----DVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDG 305
Query: 31 KARIVGVGDV 2
A+ +G+GDV
Sbjct: 306 SAKAIGMGDV 315
>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
Length = 649
Score = 99.8 bits (247), Expect = 3e-19
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 15/140 (10%)
Frame = -1
Query: 376 KGGSKSRDPR---------------KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDS 242
+G SKSR P+ +C+YC+ GH+ K C + K++ Q+K KK D+
Sbjct: 157 RGRSKSRGPKNKDRSKSKTNKFVNVECHYCHLKGHIRKYCRQLKRNM-KQRKVKNKKNDN 215
Query: 241 DNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGD 62
E+D AT D +V S + ++ + + +WVIDS AS HATP K+FF++Y GD
Sbjct: 216 SGEDDRVATTISDFLIVYDS----DVVNFSCQETSWVIDSGASIHATPRKDFFTSYTSGD 271
Query: 61 FGTVKFGNNNKARIVGVGDV 2
FG+V+ GN+ A+ +G+GDV
Sbjct: 272 FGSVRMGNDGSAKAIGMGDV 291
>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
Length = 1392
Score = 98.2 bits (243), Expect = 1e-18
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 15/140 (10%)
Frame = -1
Query: 376 KGGSKSRDPR---------------KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDS 242
+G SKSR P+ +C+YC+ GH IK Y++ + + Q+K +KK D+
Sbjct: 71 RGRSKSRGPKNRDRSKRKTNKFANVECHYCHLKGH-IKKYYRQLKRDMKQEKVKEKKNDN 129
Query: 241 DNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGD 62
E+D T D +V S + ++ A + +WVIDS AS HATP K+FF++Y GD
Sbjct: 130 GGEDDQVVTTTSDFLIVYDS----DVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGD 185
Query: 61 FGTVKFGNNNKARIVGVGDV 2
FG+V+ GN+ A+ +G+GDV
Sbjct: 186 FGSVRMGNDGSAKAIGMGDV 205
>emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera]
Length = 973
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 15/140 (10%)
Frame = -1
Query: 376 KGGSKSRDPR---------------KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDS 242
KG SKSR P+ +C YC+ H+ K C + K+D Q K KK D+
Sbjct: 136 KGRSKSRGPKNRDRSKSKTNKFVNVECLYCHLKWHIRKYCRQLKKDM-KQGKVKDKKNDN 194
Query: 241 DNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGD 62
E+D AT D ++ S + ++ A + NWVIDS AS HATP K FF++Y GD
Sbjct: 195 SGEDDRVATTTSDFLIIYDS----DVVNFARQETNWVIDSGASIHATPRKNFFTSYTFGD 250
Query: 61 FGTVKFGNNNKARIVGVGDV 2
FG+V+ GN+ A+ +G+GDV
Sbjct: 251 FGSVRMGNDGLAKAIGMGDV 270
>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
Length = 776
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/128 (38%), Positives = 74/128 (57%)
Frame = -1
Query: 385 DKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVFP 206
DK +G SKS KC++ +K GH+ + C K ++++ K QK E+ V
Sbjct: 299 DKSRGKSKSLKEIKCFHYDKLGHIKRKCKKIRREQFKGKCEEQK------EDKDIVVVAS 352
Query: 205 DGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNKA 26
DGD ++ + C+++A D+ WV+D+A SFH T +K+FFS+Y G FG V+ GN K
Sbjct: 353 DGDTTIVCDDA--CVNLACQDSTWVVDTAMSFHITTHKDFFSSYTSGSFGWVRMGNEAKC 410
Query: 25 RIVGVGDV 2
IVG+ DV
Sbjct: 411 EIVGMRDV 418
>emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]
Length = 310
Score = 95.5 bits (236), Expect = 7e-18
Identities = 48/130 (36%), Positives = 74/130 (56%)
Frame = -1
Query: 391 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 212
+RDK +G S SR KC+Y KPGH+ ++C K K+++ QK E+ A V
Sbjct: 43 NRDKSRGKSNSRKEIKCFYYGKPGHIKRECRKFKKEQFKGNGEVQK------EDKDIAVV 96
Query: 211 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 32
+ D +++ + C+++A D+ WV+D+ SFH T ++FFS+Y G FG V+ N
Sbjct: 97 ASNADTIIVCDDA--CVNLACQDSTWVVDTTTSFHITACRDFFSSYTSGSFGWVRMRNEA 154
Query: 31 KARIVGVGDV 2
K IVG+ DV
Sbjct: 155 KCEIVGMRDV 164
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 92.0 bits (227), Expect = 7e-17
Identities = 49/130 (37%), Positives = 76/130 (58%)
Frame = -1
Query: 391 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 212
+RD+ K + +C+YC+ GH+ K C + K+ Q K KK D+D E+D AT
Sbjct: 109 NRDRSKSKTNKFANVECHYCHLKGHIRKYCSQLKRYM-KQGKVKDKKNDNDGEDDRVATT 167
Query: 211 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 32
+ +V S + ++ A + +WVIDS+AS HATP K+FF++Y DFG+V GN+
Sbjct: 168 TSNFLIVYDS----DVVNFACQETSWVIDSSASIHATPQKDFFTSYTSSDFGSVMMGNDG 223
Query: 31 KARIVGVGDV 2
A+ +G+ DV
Sbjct: 224 SAKAIGMRDV 233
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 90.9 bits (224), Expect = 2e-16
Identities = 47/130 (36%), Positives = 77/130 (59%)
Frame = -1
Query: 391 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 212
+RDK +G SKS+ KC+Y K H+ + C K ++++ K QK+ ++D AT
Sbjct: 43 NRDKSRGKSKSKKEIKCFYYGKSWHIKRKCRKFRREQFKGKCEEQKE-----DKDIGATT 97
Query: 211 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 32
D D++++ + C+++A D+ WV+D+ ASFH +K+FF ++ FG V+ GN
Sbjct: 98 -SDVDMIIVCDDA--CVNLACXDSTWVVDTTASFHIIAHKDFFFSHTGDSFGWVRMGNGA 154
Query: 31 KARIVGVGDV 2
K IVG+GDV
Sbjct: 155 KCEIVGMGDV 164
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/133 (34%), Positives = 78/133 (58%)
Frame = -1
Query: 400 KGNDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTS 221
+G D+ + K S+ +D +C+YC K H+ K +K K++ KK + K D+ N+
Sbjct: 213 RGRDKSRSKSRSRYKDI-ECHYCGKKSHIKKYSFKWKRE----KKQDNKDGDTGNQV--- 264
Query: 220 ATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFG 41
ATV D +L + N +++A + W++DS A++H TP KEFF++Y GDFG ++ G
Sbjct: 265 ATVRAD----LLVACDDNVINVACHETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMG 320
Query: 40 NNNKARIVGVGDV 2
N+ + ++ G G V
Sbjct: 321 NDGQVKVTGTGTV 333
>emb|CAN80131.1| hypothetical protein VITISV_012432 [Vitis vinifera]
Length = 881
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/130 (36%), Positives = 74/130 (56%)
Frame = -1
Query: 391 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 212
+RD+ K + +C+YC+ GH+ K C + K+ Q K KK D+ E+D AT
Sbjct: 123 NRDRTKNKTIKFANVECHYCHLKGHIRKYCRQLKRGM-KQGKVKDKKNDNGGEDDRVATT 181
Query: 211 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 32
+ +V S + ++ A + +WVIDS A HATP K+FF+ Y GDFG+V+ GN+
Sbjct: 182 TSNFLIVYDS----DVVNFACQETSWVIDSGALIHATPWKDFFTFYTFGDFGSVRMGNDG 237
Query: 31 KARIVGVGDV 2
+ +G+GDV
Sbjct: 238 SVKAIGMGDV 247
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/128 (36%), Positives = 72/128 (56%)
Frame = -1
Query: 394 NDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSAT 215
N+RD+ K + +C+Y + GH++K C + K+D Q K KK D+ E+D AT
Sbjct: 212 NNRDRRKSKTNKFANVECHYFHLKGHIVKYCRQLKRDM-KQGKVKDKKNDNGGEDDRVAT 270
Query: 214 VFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNN 35
D +V S + ++ A + +WVIDS A HATP K+FF++Y GDFG+V N
Sbjct: 271 TTSDFLIVYDS----DVVNFACQETSWVIDSGALIHATPQKDFFTSYTFGDFGSVXMDNE 326
Query: 34 NKARIVGV 11
A+ +G+
Sbjct: 327 GSAKAIGM 334
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 87.0 bits (214), Expect = 2e-15
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Frame = -1
Query: 400 KGNDRDKGKG-----GSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDN 236
K ++ KG G K + RKC+YC K GH I+DC+++K+ E Q+K+ V SD+
Sbjct: 212 KNKNQGKGHGKNQETADKKKKKRKCFYCRKEGHYIRDCFEKKKKES-QEKSGDAAVASDD 270
Query: 235 EEDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFG 56
D + D++V S+ +++ WVIDS SFH P K F Y+ D G
Sbjct: 271 GSDG----YQSADLLVASN--------SNTKGQWVIDSGCSFHLCPEKTLFYKYEAVDGG 318
Query: 55 TVKFGNNNKARIVGV 11
V GNNN IVG+
Sbjct: 319 RVLMGNNNVCNIVGI 333