BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00010518
         (1367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 852   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   843   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   842   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   840   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   840   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   840   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   840   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   839   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   837   0.0  
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   835   0.0  
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   739   0.0  
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             619   e-174
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   615   e-173
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   584   e-164
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   565   e-158
gb|AFM77886.1| replicase [Hosta virus X]                              560   e-157
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA...   560   e-157
ref|NP_077079.1| replicase [Clover yellow mosaic virus]               551   e-154
gb|AAF67818.1|AF111193_1 replicase [Potato virus X]                   547   e-153
gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]          547   e-153

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  852 bits (2201), Expect = 0.0
 Identities = 417/455 (91%), Positives = 429/455 (94%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEFS                 VE+ TT LDDF+E L DKF
Sbjct: 886  KLEATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREELHDKF 945

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK
Sbjct: 946  DREIFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 1005

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS+NQ+KGGERRQSPDFHE
Sbjct: 1006 DLGDILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHE 1065

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM
Sbjct: 1066 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 1125

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1126 INCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1185

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIA
Sbjct: 1186 YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIA 1245

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSFALLK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1246 QVCPEKPSFALLKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1305

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGD+L DL
Sbjct: 1306 AQKKAGVKDAITNVVANYSLDAKLAYSLGDELHDL 1340


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  843 bits (2178), Expect = 0.0
 Identities = 412/455 (90%), Positives = 424/455 (93%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKK
Sbjct: 958  DREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 1078 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  842 bits (2176), Expect = 0.0
 Identities = 413/455 (90%), Positives = 423/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF   HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS PEAN+ EFRAKK
Sbjct: 958  DREIFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTISNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+ QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIM
Sbjct: 1078 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  840 bits (2170), Expect = 0.0
 Identities = 410/455 (90%), Positives = 423/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKK
Sbjct: 958  DREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            H ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 1078 HHILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  840 bits (2169), Expect = 0.0
 Identities = 411/455 (90%), Positives = 423/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKK
Sbjct: 958  DREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 1078 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  840 bits (2169), Expect = 0.0
 Identities = 411/455 (90%), Positives = 423/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKK
Sbjct: 958  DREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 1078 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  840 bits (2169), Expect = 0.0
 Identities = 411/455 (90%), Positives = 423/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKK
Sbjct: 958  DREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 1078 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 1352


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  839 bits (2167), Expect = 0.0
 Identities = 410/455 (90%), Positives = 422/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKIEEF+                 VED TTTLDDFKE L DKF
Sbjct: 898  KLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKF 957

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF  AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S PEAN+ EFRAKK
Sbjct: 958  DREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKK 1017

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHE
Sbjct: 1018 DLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHE 1077

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 1078 HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 1137

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1138 INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1197

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1198 YLDIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1257

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1258 QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1317

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ NYSLDAKLAYSLGDDLQDL
Sbjct: 1318 AQKKAGVKDAITNVVDNYSLDAKLAYSLGDDLQDL 1352


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  837 bits (2161), Expect = 0.0
 Identities = 410/455 (90%), Positives = 422/455 (92%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVREDKI EF                  VE+  TTLDDFKE L DKF
Sbjct: 903  KLEATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEELRDKF 962

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIFT   GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL ISTPEANIEEFRAKK
Sbjct: 963  DREIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKISTPEANIEEFRAKK 1022

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK++ Q+KGGERRQSPDFHE
Sbjct: 1023 DLGDILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHE 1082

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM
Sbjct: 1083 HQILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 1142

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 1143 INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 1202

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIA
Sbjct: 1203 YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIA 1262

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 1263 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1322

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGV+DAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 1323 AQKKAGVRDAITNVVANYSLDAKLAYSLGDDLQDL 1357


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score =  835 bits (2156), Expect = 0.0
 Identities = 406/455 (89%), Positives = 424/455 (93%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVRED++ EFS                 VED TTTLDDF+E L DKF
Sbjct: 229  KLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKF 288

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEAN+ EFRAKK
Sbjct: 289  DREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKK 348

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHE
Sbjct: 349  DLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHE 408

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIM
Sbjct: 409  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIM 468

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG
Sbjct: 469  INCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 528

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+
Sbjct: 529  YLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAIS 588

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK
Sbjct: 589  QVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 648

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            AQKKAGVKDAI+NV+ANYSLDAKLAYSLGDDLQDL
Sbjct: 649  AQKKAGVKDAITNVVANYSLDAKLAYSLGDDLQDL 683


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  739 bits (1907), Expect = 0.0
 Identities = 361/455 (79%), Positives = 395/455 (86%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLSLVRE K+EEF+                 VE+ + TL   ++SL+DK+
Sbjct: 879  KLEATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASHTLGLIQDSLADKY 938

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREI    HG TNCVQ +D T QLFSHQQAKDEALLWETI ARL +STPEAN+ EF AKK
Sbjct: 939  DREILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLSTPEANLAEFHAKK 998

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            DLGD+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E
Sbjct: 999  DLGDVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPE 1058

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            ++ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIM
Sbjct: 1059 NKILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIM 1118

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFEILKAK+FNLPEWVIEG
Sbjct: 1119 INCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEILKAKFFNLPEWVIEG 1178

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTHTRF IP+  AQ+YAGDDCAIA
Sbjct: 1179 YLDIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPDHVAQLYAGDDCAIA 1238

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            +VC EKPSFALLKNRIALQAKPAY PQ RG WAEFCGYLITPKGLIKDPLKLH+SLELAK
Sbjct: 1239 EVCQEKPSFALLKNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLIKDPLKLHSSLELAK 1298

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            A +K G KDAI+NV+ANYSLDAK+AYSLGDDLQDL
Sbjct: 1299 ALRKQGRKDAITNVVANYSLDAKMAYSLGDDLQDL 1333


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  619 bits (1595), Expect = e-174
 Identities = 310/455 (68%), Positives = 349/455 (76%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLK FLS VRE+ I                     VE+ +  L  + E + +KF
Sbjct: 905  KLEATPYLKAFLSTVREEAIAAHQLPNADPRPDPEPKTHFPVENTSCALGAYMEKVPEKF 964

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            +REIFTE  GHTNCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KK
Sbjct: 965  EREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYRKK 1024

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GDILW +Y KAM LP+E   FSEDLW   A EVQNTYL K +N +K GERRQSPDF +
Sbjct: 1025 DIGDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEK 1084

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQIL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I 
Sbjct: 1085 HQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIK 1144

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEILKAK+FN+PE +I+G
Sbjct: 1145 INCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEILKAKHFNIPEEIIQG 1204

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA
Sbjct: 1205 YLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIA 1264

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
             V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L +
Sbjct: 1265 CVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKLLQ 1324

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            A   +G K  +     NY  D  LAY+L D L ++
Sbjct: 1325 A--TSGSKKELVEAAGNYERDVGLAYALKDSLYEI 1357


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  615 bits (1586), Expect = e-173
 Identities = 309/455 (67%), Positives = 348/455 (76%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLK FLS VRE+ I                     VE+ +  L  + E + +KF
Sbjct: 905  KLEATPYLKAFLSTVREEAIAAHQLPSADPRPDPEPKTHFPVENTSCALGAYMEKVPEKF 964

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            +REIFTE  GHTNCVQ  +P  QLF HQQAKDEALLWETIKARLTIS+PEAN EEF  KK
Sbjct: 965  EREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTISSPEANWEEFYKKK 1024

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GDILW +Y KAM LP+E   FSEDLW   A EVQNTYL K +N +K GERRQSPDF +
Sbjct: 1025 DIGDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEK 1084

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            HQIL+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I 
Sbjct: 1085 HQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIK 1144

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQD AMLQFEILKAK+FN+P  +I+G
Sbjct: 1145 INCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFEILKAKHFNIPGEIIQG 1204

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP GTAQ+YAGDD AIA
Sbjct: 1205 YLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPPGTAQLYAGDDSAIA 1264

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
             V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLIKDP KL ASL+L +
Sbjct: 1265 CVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLIKDPAKLFASLKLLQ 1324

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            A   +G K  +     NY  D  LAY+L D L ++
Sbjct: 1325 A--TSGSKKELVEAAGNYERDVGLAYALKDSLYEI 1357


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  584 bits (1505), Expect = e-164
 Identities = 302/460 (65%), Positives = 341/460 (74%), Gaps = 5/460 (1%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFLS+VREDKI E+                  VE+  T L++F E L+ K 
Sbjct: 973  KLEATPYLKTFLSMVREDKILEWRPKEPEPAKEEPPKTHFPVENGNTILEEFTEELAQKH 1032

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            +REIF E+HGHTNCVQ D+   Q  SHQQAKDEALLWETIKARL IS  + N  EF  KK
Sbjct: 1033 EREIFNESHGHTNCVQTDNKIIQTLSHQQAKDEALLWETIKARLVISHKQHNWTEFVKKK 1092

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GDILW NY +AM LP++   F E+LW   A E+Q+TYL KS   +K GERRQSPDF E
Sbjct: 1093 DIGDILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGE 1151

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
              ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P +IM
Sbjct: 1152 KDILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIM 1211

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEILKAK+ N+PEWV+EG
Sbjct: 1212 INCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEILKAKHHNIPEWVLEG 1271

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIKL  +IFLGTLSIMRLTGE  TFDANTECNIAYTHTRF+IPEG AQ     D A+ 
Sbjct: 1272 YLDIKLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTHTRFDIPEGVAQ-----DSAMD 1326

Query: 1082 QVCPEKPSFALLKNRIALQ-----AKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHAS 1246
              C EKPSF L+++ ++L+      KP    Q  G+WAEFCGYLITPKGLIKDPLKL AS
Sbjct: 1327 ATCLEKPSFKLIESELSLKLYAGDCKPCLKAQIPGEWAEFCGYLITPKGLIKDPLKLAAS 1386

Query: 1247 LELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
              LAK + K      + N + NY+ D KLAY LGDDL +L
Sbjct: 1387 FRLAKERGKR----ELDNCLENYARDMKLAYDLGDDLLEL 1422


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  565 bits (1457), Expect = e-158
 Identities = 280/455 (61%), Positives = 338/455 (74%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KL ATPYLKTFL   RE++++E                   VE++   L++  E L +K 
Sbjct: 1226 KLNATPYLKTFLDFTREERLKESQPREQEPTEPEGPTTHFPVENEKFVLEEQVEELLEKH 1285

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREI    HGHTNCVQ +D   QLFSHQQAKD+ALLW TI+ARL IS P+ANI EF AKK
Sbjct: 1286 DREILRPDHGHTNCVQTEDAVIQLFSHQQAKDQALLWATIEARLKISNPKANIAEFNAKK 1345

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            ++GD+L+ +YH+AMKLP +   F EDLW  CA+EVQ TYL K IN +K GE RQSPDF +
Sbjct: 1346 EIGDVLFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDK 1405

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            + I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A  P  IM
Sbjct: 1406 NTIALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIM 1465

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEK PQ LS W+ NYW F+  +YANDFT FDQSQDGAMLQFEILKAK+ ++PEWV+EG
Sbjct: 1466 INCEKDPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEWVLEG 1525

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            YLDIK + K+F G LSIMRLTGEGPTFDANTECNIAYTH RF++P+GTAQ+YAGDD A++
Sbjct: 1526 YLDIKTNAKVFSGVLSIMRLTGEGPTFDANTECNIAYTHLRFDVPKGTAQLYAGDDSALS 1585

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
             + PE+PSFA  K ++ L +KPA   Q+RG WAEFCGYLITP G++KDP KL A++ LA+
Sbjct: 1586 CLPPERPSFADFKQQLTLTSKPALFAQKRGFWAEFCGYLITPLGIMKDPAKLAATVVLAQ 1645

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
             Q K      +     +++LD KLAY   D L ++
Sbjct: 1646 KQNK------LHECWRSHALDLKLAYVHRDALTEV 1674


>gb|AFM77886.1| replicase [Hosta virus X]
          Length = 1473

 Score =  560 bits (1443), Expect = e-157
 Identities = 278/455 (61%), Positives = 331/455 (72%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFL L RE+KI E +                 VE          E + +K 
Sbjct: 978  KLEATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKH 1037

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
             REI+ + HGHTNCVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+
Sbjct: 1038 AREIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKR 1097

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GD+L+  YHKAM LPK+   F  DLW  CA+EVQ TYL K IN IK GE+RQ PDF +
Sbjct: 1098 DIGDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDK 1157

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            + I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+
Sbjct: 1158 NAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHIL 1217

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I G
Sbjct: 1218 INCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILG 1277

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            Y+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A++
Sbjct: 1278 YMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALS 1337

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            +VCPEK SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA 
Sbjct: 1338 KVCPEKDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA- 1396

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
               K G    I   + +Y  D KL+Y LGD LQ+L
Sbjct: 1397 --TKLGTLQQI-KCVNSYGEDLKLSYDLGDHLQEL 1428


>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
            [Hosta virus X]
          Length = 1507

 Score =  560 bits (1443), Expect = e-157
 Identities = 278/455 (61%), Positives = 331/455 (72%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KLEATPYLKTFL L RE+KI E +                 VE          E + +K 
Sbjct: 1012 KLEATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAHLYSSITEEMPEKH 1071

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
             REI+ + HGHTNCVQ D+P  Q+F+HQQAKDEAL WETI+ARL I+T EAN++E   K+
Sbjct: 1072 AREIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRITTSEANVQELNEKR 1131

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GD+L+  YHKAM LPK+   F  DLW  CA+EVQ TYL K IN IK GE+RQ PDF +
Sbjct: 1132 DIGDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLIKNGEKRQGPDFDK 1191

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            + I++FLKSQWVKKMEKLGA  IKPGQTIASF Q  VMLYGTMARYMRR RD   P +I+
Sbjct: 1192 NAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYMRRIRDRFCPKHIL 1251

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCEKTP  +S +V   WDFS  +YANDFTAFDQSQDGAMLQFEI+KAK+ N+PE +I G
Sbjct: 1252 INCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFEIIKAKFHNIPEDIILG 1311

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            Y+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +PE  AQ+YAGDD A++
Sbjct: 1312 YMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNVPENVAQVYAGDDSALS 1371

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            +VCPEK SF    +R+ L++KP   PQ +G WAEFCG LITP+G+IKDP+KLHAS  LA 
Sbjct: 1372 KVCPEKDSFKQFADRLTLKSKPQVFPQTQGAWAEFCGLLITPRGIIKDPVKLHASWVLA- 1430

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
               K G    I   + +Y  D KL+Y LGD LQ+L
Sbjct: 1431 --TKLGTLQQI-KCVNSYGEDLKLSYDLGDHLQEL 1462


>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
          Length = 1670

 Score =  551 bits (1421), Expect = e-154
 Identities = 269/455 (59%), Positives = 338/455 (74%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KL +TPYLKTFLS +RED++ E                   VE++  +L+D  E L +K 
Sbjct: 1194 KLNSTPYLKTFLSTLREDRLREEGPKPETPEEPKPATTHFPVENENLSLEDKVEELLEKH 1253

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            +RE+++  HG++NCVQ DDP  QLFSHQQAKD+ LLW TI+ARL IS P+AN+EEFR KK
Sbjct: 1254 ERELYSSDHGYSNCVQTDDPVVQLFSHQQAKDQTLLWATIEARLKISNPKANMEEFRMKK 1313

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            ++GD+LW NY +AMKLP +  EFS +LW  CAEEVQ TYL K +N IK GE RQSPDF +
Sbjct: 1314 NVGDVLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDK 1373

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            H I +FLKSQWVKK+EKLGA KIKPGQTIASFQQ  VMLYGTMARYMRR R A  P NI 
Sbjct: 1374 HTISLFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQ 1433

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            +NCE+TPQ L+ ++ + W F +P+YANDFT FDQSQDGAMLQFE+LKAK+ N+PE +I+G
Sbjct: 1434 LNCEQTPQQLTTFIKDQWSFDQPAYANDFTQFDQSQDGAMLQFEVLKAKHHNIPEAIIQG 1493

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            Y+DIK + K+F G L+IMRLTGEGPTFDANTECNIA+ HTRF I + TAQ+YAGDD A +
Sbjct: 1494 YIDIKTNAKVFTGVLAIMRLTGEGPTFDANTECNIAFNHTRFHISDDTAQLYAGDDTAFS 1553

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
            ++  EK SF  +  ++AL +KP +  Q++G+WAEFCGY ITP GLIK+P KL A+L LA 
Sbjct: 1554 KIPIEKVSFQGVAKQLALTSKPLFYKQKKGEWAEFCGYSITPLGLIKEPKKLQANLTLAI 1613

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
             Q K  +KD ++    +YS D  LAY   D+L ++
Sbjct: 1614 KQNK--IKDTVN----SYSQDVALAYQHKDELYEI 1642


>gb|AAF67818.1|AF111193_1 replicase [Potato virus X]
          Length = 1456

 Score =  547 bits (1410), Expect = e-153
 Identities = 266/455 (58%), Positives = 335/455 (73%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KL++TPYLKTFLS+VRE  ++E+                  VE++ + L+++KE L +KF
Sbjct: 975  KLDSTPYLKTFLSVVREQTLKEYEPAEVEPIREPEPQTHMCVENEESVLEEYKEELLEKF 1034

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREI +E+HGH+NCVQ +D T QLFSHQQAKDE LLW TI ARL  S  E N  EF +KK
Sbjct: 1035 DREIHSESHGHSNCVQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKK 1094

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GD+L+ NY KAM LPKE+  FS+++W  CA EVQ+ YL KS   +  G  RQSPDF E
Sbjct: 1095 DIGDVLFLNYQKAMGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDE 1154

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            ++I++FLKSQWV K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P  + 
Sbjct: 1155 NKIMVFLKSQWVTKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVF 1214

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE TP+D+S W LN W+F +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +I+ 
Sbjct: 1215 INCETTPEDMSAWALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQA 1274

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD A+ 
Sbjct: 1275 YIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALD 1334

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
             V   KPSF  L++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+LA+
Sbjct: 1335 CVPEVKPSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAE 1394

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            A      K  +     +Y +D   AY   D L DL
Sbjct: 1395 A------KGELKKCQDSYEIDLSYAYDHKDSLHDL 1423


>gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]
          Length = 1456

 Score =  547 bits (1410), Expect = e-153
 Identities = 267/455 (58%), Positives = 335/455 (73%)
 Frame = +2

Query: 2    KLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLDDFKESLSDKF 181
            KL++TPYLKTFLS+VRE  ++E+                  VE++ + L+++KE L +KF
Sbjct: 975  KLDSTPYLKTFLSVVREQALKEYEPAEVESIREPEPQTHMCVENEESVLEEYKEELLEKF 1034

Query: 182  DREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKK 361
            DREI +E+HGH+NCVQ +D T QLFSHQQAKDE LLW TI ARL  S  E N  EF +KK
Sbjct: 1035 DREIHSESHGHSNCVQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKK 1094

Query: 362  DLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHE 541
            D+GD+L+ NY KAM LPKE+  FS+++W  CA EVQ+ YL KS   +  G  RQSPDF E
Sbjct: 1095 DIGDVLFLNYQKAMGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDE 1154

Query: 542  HQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIM 721
            ++I++FLKSQWV K+EKLG  KIKPGQTIA+F Q  VML+GTMARYMR FR A  P  + 
Sbjct: 1155 NKIMVFLKSQWVTKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVF 1214

Query: 722  INCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEG 901
            INCE TP+D+S WVLN WDF +PS AND+TAFDQSQDGAMLQFE+LKAK+  +PE +I+ 
Sbjct: 1215 INCETTPEDMSAWVLNNWDFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQA 1274

Query: 902  YLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIA 1081
            Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP GTAQ+YAGDD A+ 
Sbjct: 1275 YIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALD 1334

Query: 1082 QVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAK 1261
             V   K SF  L++++ L++KP  T Q++G W EFCG+LITPKG++KDP+KLH SL+LA+
Sbjct: 1335 CVPEVKHSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAE 1394

Query: 1262 AQKKAGVKDAISNVIANYSLDAKLAYSLGDDLQDL 1366
            A      K  +     +Y +D   AY   D L DL
Sbjct: 1395 A------KGELKKCQDSYEIDLSYAYDHKDSLHDL 1423