BLASTX nr result

ID: Rehmannia22_contig00010460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00010460
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ03171.1| hypothetical protein PRUPE_ppa004785mg [Prunus pe...    60   4e-07
ref|XP_006481757.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   2e-06
ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   3e-06

>gb|EMJ03171.1| hypothetical protein PRUPE_ppa004785mg [Prunus persica]
          Length = 491

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
 Frame = +3

Query: 3   KPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDD---- 170
           +P+E+EE V+L  DND                                      ++    
Sbjct: 15  RPIESEERVDLDGDNDPEETIEEEVEYEEVEEEEEVEEVEEEEEEEEEEDPEEGEEEGEN 74

Query: 171 ---AHRHDTQKESDGDDDMENAEGDEELEKKRSELLALPPHGSEVYL 302
              A + D QK SDGD++M   +G+EE +KK +ELLA PPHGSEVYL
Sbjct: 75  KGAATKSDGQKSSDGDEEMTVVDGEEEEKKKHAELLARPPHGSEVYL 121


>ref|XP_006481757.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
           X1 [Citrus sinensis] gi|568856372|ref|XP_006481758.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           R-like isoform X2 [Citrus sinensis]
          Length = 493

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   KPVETEEHVELGADNDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAHRH 182
           KP+E+EE V+L  DND                                      D     
Sbjct: 25  KPIESEERVDLDEDND-HEEEVEEEVEYEEVEEEEEVEVEEEVEEEVEEEEETEDVVDGI 83

Query: 183 DTQKESDGDDDMENAEGDEELEKKR-SELLALPPHGSEVYL 302
           D QK  DGD++M+ AE D++ EKK+ +ELLALPPHGSEVYL
Sbjct: 84  DAQKHYDGDEEMKVAESDKDDEKKKHAELLALPPHGSEVYL 124


>ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
           vinifera]
          Length = 490

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +3

Query: 165 DDAHRHDTQKESDGDDDMENAEGDEELEKKR-SELLALPPHGSEVYL 302
           +D +  D QK+ DGDD++++A+G+ + E +R +ELLALPPHGSEVYL
Sbjct: 79  EDTYFADAQKDPDGDDEIKSAKGEVDNENRRHAELLALPPHGSEVYL 125


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